Pregenerated sensors for MYL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013936Ensembl transcript IDs: ENSMUST00000014080.13, ENSMUST00000111750.8, ENSMUST00000111751.8, ENSMUST00000153816.6, ENSMUST00000155612.8
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TCTCCTACTGGTTCTCGTCTGTCTGAGCAGGATGACATCATCAACTaGCGGTCACAGCAGCAGACCTCCCATGAGGGCACCCGGAGCATC | + |
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Preference number: 2 (lower is better) Translates to: SPTGSRLSEQDDIIN*RSQQQTSHEGTRSI Trigger: GATGCTCCGGGTGCCCTCATGGGAGGTCTGCTGCTGTGACCGCAAGTTGATGATGTCATCCTGCTCAGACAGACGAGAACCAGTAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| 3UTR TCA 72 bp | CATCATCAACTTGCGGTCACAGCAGCAGACCTCCCATaGGGGCACCCGGAGCATCCTGAGGCTGTGGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: HHQLAVTAADLP*GHPEHPEAVVQ Trigger: CTGAACCACAGCCTCAGGATGCTCCGGGTGCCCTCATGGGAGGTCTGCTGCTGTGACCGCAAGTTGATGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| 3UTR TCA 72 bp | CACTGTGGCCCGGCCCTGTGGTGGCAATGGGTATTGTaGCCACCATCAAGCCTTGTGGCATGTGACAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: HCGPALWWQWVL*PPSSLVACDSR Trigger: TCTGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATTGCCACCACAGGGCCGGGCCACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| 3UTR GCA 72 bp | GTTCTCGTCTGTCTGAGCAGGATGACATCATCAACTTaGGGTCACAGCAGCAGACCTCCCATGAGGGCACCC | + |
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Preference number: 3 (lower is better) Translates to: VLVCLSRMTSST*GHSSRPPMRAP Trigger: GGGTGCCCTCATGGGAGGTCTGCTGCTGTGACCGCAAGTTGATGATGTCATCCTGCTCAGACAGACGAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR CCA 90 bp | TGTGACAGCAGATGTCGTCATCCCTCCTTGACAGACAGGGAGACCGAGGTACACAAGGGGGCTGGGTGGTaGGAACACTGGAGACCCTGT | + |
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Preference number: 4 (lower is better) Translates to: CDSRCRHPSLTDRETEVHKGAGW*EHWRPC Trigger: ACAGGGTCTCCAGTGTTCCCACCACCCAGCCCCCTT...GTGTACCTCGGTCTCCCTGTCTGTCAAGGAGGGATGACGACATCTGCTGTCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR TCA 90 bp | CAGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTATAGTCAGCCTTCAGTaGCCCTTTGCCCTCGGGATC | + |
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Preference number: 4 (lower is better) Translates to: QSQDFLFICAQPWDGEWAIVSLQ*PFALGI Trigger: GATCCCGAGGGCAAAGGGTCACTGAAGGCTGACTAT...AGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR GCA 90 bp | CAGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTGTCAGGGGGAAAGGCTaGGAACATCTGGTCGATCTC | + |
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Preference number: 4 (lower is better) Translates to: QSQDFLFICAQPWDGEWAVRGKG*EHLVDL Trigger: GAGATCGACCAGATGTTCGCAGCCTTTCCCCCTGAC...AGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR GCA 90 bp | GGGCAACTCCCATCTTCTCCTACTGGTTCTCGTCTGTCTGAGCAGGATGACATCGTCAGGGGGAAAGGCTaGGAACATCTGGTCGATCTC | + |
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Preference number: 4 (lower is better) Translates to: GQLPSSPTGSRLSEQDDIVRGKG*EHLVDL Trigger: GAGATCGACCAGATGTTCGCAGCCTTTCCCCCTGAC...GATGTCATCCTGCTCAGACAGACGAGAACCAGTAGGAGAAGATGGGAGTTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR CCA 90 bp | CCAGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCAAGGCTGCGAACATCTaGTCGATCTCCTCTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PEPRLPVYLRTALGWRVGKAANI*SISSLE Trigger: CTCCAAAGAGGAGATCGACCAGATGTTCGCAGCCTT...GCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR CCA 90 bp | GGCAATGGGTATTGTGACCACCATCAAGCCTTGTGGCATGTGACAGCAGATGTCATAAAGGGGGCTGGGTaGTGGGAACACTGGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: GNGYCDHHQALWHVTADVIKGAG*WEHWRP Trigger: GGGTCTCCAGTGTTCCCACCACCCAGCCCCCTTTAT...GACATCTGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR TCA 90 bp | AGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTGGGTCATTCTTGTCGATaGAGCCGTCTCTGTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: RAKTSCLFAHSPGMESGLGHSCR*SRLCSG Trigger: ACCAGAACAGAGACGGCTTCATCGACAAGAATGACC...CAGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR TCA 90 bp | GGTGGCAATGGGTATTGTGACCACCATCAAGCCTTGTGGCATGTGACAGCAGATATAGTCAGCCTTCAGTaGCCCTTTGCCCTCGGGATC | + |
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Preference number: 4 (lower is better) Translates to: GGNGYCDHHQALWHVTADIVSLQ*PFALGI Trigger: GATCCCGAGGGCAAAGGGTCACTGAAGGCTGACTAT...ATCTGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATTGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR CCA 90 bp | GAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTGTGCTTCCTTGAACTCCTaGATCTGGGTCTGCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: EPRLPVYLRTALGWRVGCASLNS*IWVCSN Trigger: GTTTGAGCAGACCCAGATCCAGGAGTTCAAGGAAGC...ACAGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR CCA 90 bp | GTCTGTCTGAGCAGGATGACATCATCAACTTGCGGTCACAGCAGCAGACCTCCCGCTTCCTTGAACTCCTaGATCTGGGTCTGCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: VCLSRMTSSTCGHSSRPPASLNS*IWVCSN Trigger: GTTTGAGCAGACCCAGATCCAGGAGTTCAAGGAAGC...GGGAGGTCTGCTGCTGTGACCGCAAGTTGATGATGTCATCCTGCTCAGACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR CCA 90 bp | AGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTGGGTCGATCTCCTCTTTaGAGAACCTCTCTGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: RAKTSCLFAHSPGMESGLGRSPL*RTSLLV Trigger: CACAAGCAGAGAGGTTCTCCAAAGAGGAGATCGACC...CAGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR CCA 90 bp | GGTGGCAATGGGTATTGTGACCACCATCAAGCCTTGTGGCATGTGACAGCAGATGTCTATAAAGGGGGCTaGGTGGTGGGAACACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GGNGYCDHHQALWHVTADVYKGG*VVGTLE Trigger: CTCCAGTGTTCCCACCACCCAGCCCCCTTTATAGAC...ATCTGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATTGCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| 3UTR CAA 72 bp | CTTGTGGCATGTGACAGCAGATGTCGTCATCCCTCCTaGACAGACAGGGAGACCGAGGTACACAGATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVACDSRCRHPS*TDRETEVHRYS Trigger: ACTGTATCTGTGTACCTCGGTCTCCCTGTCTGTCAAGGAGGGATGACGACATCTGCTGTCACATGCCACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR TCA 90 bp | GCCAGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGGACCTGGAGCCTCTTTaGTCATTTCATCGATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ARAKTSCLFAHSPGMESGDLEPL*SFHRSL Trigger: AAGAGATCGATGAAATGATCAAAGAGGCTCCAGGTC...CCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR TCA 90 bp | CTTCTCCTACTGGTTCTCGTCTGTCTGAGCAGGATGACATCATCAACTTGCGGTATAGTCAGCCTTCAGTaGCCCTTTGCCCTCGGGATC | + |
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Preference number: 4 (lower is better) Translates to: LLLLVLVCLSRMTSSTCGIVSLQ*PFALGI Trigger: GATCCCGAGGGCAAAGGGTCACTGAAGGCTGACTAT...ACCGCAAGTTGATGATGTCATCCTGCTCAGACAGACGAGAACCAGTAGGAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR GCA 90 bp | AGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTGTTTGGAGAACCTCTCTaGTTGTGTGGTCAGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: RAKTSCLFAHSPGMESGLFGEPL*LCGQHL Trigger: GAGATGCTGACCACACAAGCAGAGAGGTTCTCCAAA...CAGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR CCA 90 bp | ACCCCACATGGAGTAGGGTTGGATACAGTGGATGAGGGCAACTCCCATCTTCTCAAGGCTGCGAACATCTaGTCGATCTCCTCTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: TPHGVGLDTVDEGNSHLLKAANI*SISSLE Trigger: CTCCAAAGAGGAGATCGACCAGATGTTCGCAGCCTT...GAGAAGATGGGAGTTGCCCTCATCCACTGTATCCAACCCTACTCCATGTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR TCA 90 bp | GGTGGCAATGGGTATTGTGACCACCATCAAGCCTTGTGGCATGTGACAGCAGATGGTCATTCTTGTCGATaGAGCCGTCTCTGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGNGYCDHHQALWHVTADGHSCR*SRLCSG Trigger: ACCAGAACAGAGACGGCTTCATCGACAAGAATGACC...ATCTGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATTGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR TCA 90 bp | ACTGGTTCTCGTCTGTCTGAGCAGGATGACATCATCAACTTGCGGTCACAGCAGGGTCATTCTTGTCGATaGAGCCGTCTCTGTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TGSRLSEQDDIINLRSQQGHSCR*SRLCSG Trigger: ACCAGAACAGAGACGGCTTCATCGACAAGAATGACC...CTGCTGTGACCGCAAGTTGATGATGTCATCCTGCTCAGACAGACGAGAACCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR TCA 90 bp | TGTGACAGCAGATGTCGTCATCCCTCCTTGACAGACAGGGAGACCGAGGTACACGACCTGGAGCCTCTTTaGTCATTTCATCGATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: CDSRCRHPSLTDRETEVHDLEPL*SFHRSL Trigger: AAGAGATCGATGAAATGATCAAAGAGGCTCCAGGTC...GTGTACCTCGGTCTCCCTGTCTGTCAAGGAGGGATGACGACATCTGCTGTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR CCA 90 bp | TGTGGTGGCAATGGGTATTGTGACCACCATCAAGCCTTGTGGCATGTGACAGCAGCTTCCTTGAACTCCTaGATCTGGGTCTGCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: CGGNGYCDHHQALWHVTAASLNS*IWVCSN Trigger: GTTTGAGCAGACCCAGATCCAGGAGTTCAAGGAAGC...TGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATTGCCACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR CCA 90 bp | AGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTGCACGGTGAAGTTAATTaGACCTGGAGCCTCTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: RAKTSCLFAHSPGMESGLHGEVN*TWSLFD Trigger: ATCAAAGAGGCTCCAGGTCCAATTAACTTCACCGTG...CAGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR CCA 90 bp | CAGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTTCCTTCTCTTCTCCGTaGGTAATGATGTGGACCAAA | + |
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Preference number: 4 (lower is better) Translates to: QSQDFLFICAQPWDGEWASFSSP*VMMWTK Trigger: TTTGGTCCACATCATTACCCACGGAGAAGAGAAGGA...AGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR CCA 90 bp | GGCAATGGGTATTGTGACCACCATCAAGCCTTGTGGCATGTGACAGCAGATGTCCCTGTACCTCCTCTTTaGAGAACCTCTCTGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: GNGYCDHHQALWHVTADVPVPPL*RTSLLV Trigger: CACAAGCAGAGAGGTTCTCCAAAGAGGAGGTACAGG...GACATCTGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR GCA 90 bp | TGTGGTGGCAATGGGTATTGTGACCACCATCAAGCCTTGTGGCATGTGACAGCATTTGGAGAACCTCTCTaGTTGTGTGGTCAGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: CGGNGYCDHHQALWHVTAFGEPL*LCGQHL Trigger: GAGATGCTGACCACACAAGCAGAGAGGTTCTCCAAA...TGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATTGCCACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR GCA 90 bp | ACTGGTTCTCGTCTGTCTGAGCAGGATGACATCATCAACTTGCGGTCACAGCAGTTTGGAGAACCTCTCTaGTTGTGTGGTCAGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: TGSRLSEQDDIINLRSQQFGEPL*LCGQHL Trigger: GAGATGCTGACCACACAAGCAGAGAGGTTCTCCAAA...CTGCTGTGACCGCAAGTTGATGATGTCATCCTGCTCAGACAGACGAGAACCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR CCA 90 bp | CTGGTTCTCGTCTGTCTGAGCAGGATGACATCATCAACTTGCGGTCACAGCAGCTCCTTCTCTTCTCCGTaGGTAATGATGTGGACCAAA | + |
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Preference number: 4 (lower is better) Translates to: LVLVCLSRMTSSTCGHSSSFSSP*VMMWTK Trigger: TTTGGTCCACATCATTACCCACGGAGAAGAGAAGGA...GCTGCTGTGACCGCAAGTTGATGATGTCATCCTGCTCAGACAGACGAGAACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR CCA 90 bp | AGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTGGAAGTTAATTGGACCTaGAGCCTCTTTGATCATTTC | + |
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Preference number: 4 (lower is better) Translates to: RAKTSCLFAHSPGMESGLEVNWT*SLFDHF Trigger: GAAATGATCAAAGAGGCTCCAGGTCCAATTAACTTC...CAGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR CCA 90 bp | TGTGACAGCAGATGTCGTCATCCCTCCTTGACAGACAGGGAGACCGAGGTACACGAAGTTAATTGGACCTaGAGCCTCTTTGATCATTTC | + |
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Preference number: 4 (lower is better) Translates to: CDSRCRHPSLTDRETEVHEVNWT*SLFDHF Trigger: GAAATGATCAAAGAGGCTCCAGGTCCAATTAACTTC...GTGTACCTCGGTCTCCCTGTCTGTCAAGGAGGGATGACGACATCTGCTGTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR CCA 90 bp | GGTGGCAATGGGTATTGTGACCACCATCAAGCCTTGTGGCATGTGACAGCAGATCACGGTGAAGTTAATTaGACCTGGAGCCTCTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: GGNGYCDHHQALWHVTADHGEVN*TWSLFD Trigger: ATCAAAGAGGCTCCAGGTCCAATTAACTTCACCGTG...ATCTGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATTGCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR CCA 90 bp | CCTACTGGTTCTCGTCTGTCTGAGCAGGATGACATCATCAACTTGCGGTCACAGCACGGTGAAGTTAATTaGACCTGGAGCCTCTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: PTGSRLSEQDDIINLRSQHGEVN*TWSLFD Trigger: ATCAAAGAGGCTCCAGGTCCAATTAACTTCACCGTG...CTGTGACCGCAAGTTGATGATGTCATCCTGCTCAGACAGACGAGAACCAGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR CCA 90 bp | TCCCATCTTCTCCTACTGGTTCTCGTCTGTCTGAGCAGGATGACATCATCAACTGGTCGATCTCCTCTTTaGAGAACCTCTCTGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: SHLLLLVLVCLSRMTSSTGRSPL*RTSLLV Trigger: CACAAGCAGAGAGGTTCTCCAAAGAGGAGATCGACC...AGTTGATGATGTCATCCTGCTCAGACAGACGAGAACCAGTAGGAGAAGATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS CCA 90 bp | AGGGGGCTGGGTGGTGGGAACACTGGAGACCCTGTACCTCCTCTTTaGAGAACCTCTCTGCTTGTGTGGTCAGCATCTCCCGGACATAGT | + |
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Preference number: 5 (lower is better) Translates to: RGLGGGNTGDPVPPL*RTSLLVWSASPGHS Trigger: ACTATGTCCGGGAGATGCTGACCACACAAGCAGAGAGGTTCTCCAAAGAGGAGGTACAGGGTCTCCAGTGTTCCCACCACCCAGCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS CCA 90 bp | GGTCGAGACGGGGTGTCTATAAAGGGGGCTGGGTGGTGGGAACACTaGAGACCCTGTACCTCCTCTTTGGAGAACCTCTCTGCTTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: GRDGVSIKGAGWWEH*RPCTSSLENLSACV Trigger: CACACAAGCAGAGAGGTTCTCCAAAGAGGAGGTACAGGGTCTCCAGTGTTCCCACCACCCAGCCCCCTTTATAGACACCCCGTCTCGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS CCA 90 bp | GGGATGTCACTAGGTCGAGACGGGGTGTCTATAAAGGGGGCTGGGTaGTGGGAACACTGGAGACCCTGTACCTCCTCTTTGGAGAACCTC | + |
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Preference number: 5 (lower is better) Translates to: GMSLGRDGVSIKGAG*WEHWRPCTSSLENL Trigger: GAGGTTCTCCAAAGAGGAGGTACAGGGTCTCCAGTGTTCCCACCACCCAGCCCCCTTTATAGACACCCCGTCTCGACCTAGTGACATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS CCA 90 bp | GAACACGTTGGAGCTCCCGCCTTCTATCCGCTTCTTGGCTTTCTTTaGTGCCTGGGGAGTGAGTCTCTGGTACCCAGACAACATGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: EHVGAPAFYPLLGFL*CLGSESLVPRQHAR Trigger: CCTCGCATGTTGTCTGGGTACCAGAGACTCACTCCCCAGGCACCAAAGAAAGCCAAGAAGCGGATAGAAGGCGGGAGCTCCAACGTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153816.6 |
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| CDS-3UTR CAA 90 bp | CAGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTGGAGAACCTCTCTGCTaGTGTGGTCAGCATCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: QSQDFLFICAQPWDGEWAGEPLC*CGQHLP Trigger: CGGGAGATGCTGACCACACAAGCAGAGAGGTTCTCC...AGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS CCA 90 bp | ATGTCACTAGGTCGAGACGGGGTGTCTATAAAGGGGGCTGGGTGGTaGGAACACTGGAGACCCTGTACCTCCTCTTTGGAGAACCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: MSLGRDGVSIKGAGW*EHWRPCTSSLENLS Trigger: AGAGAGGTTCTCCAAAGAGGAGGTACAGGGTCTCCAGTGTTCCCACCACCCAGCCCCCTTTATAGACACCCCGTCTCGACCTAGTGACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR CAA 90 bp | GGGCAACTCCCATCTTCTCCTACTGGTTCTCGTCTGTCTGAGCAGGATGACATCGGAGAACCTCTCTGCTaGTGTGGTCAGCATCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: GQLPSSPTGSRLSEQDDIGEPLC*CGQHLP Trigger: CGGGAGATGCTGACCACACAAGCAGAGAGGTTCTCC...GATGTCATCCTGCTCAGACAGACGAGAACCAGTAGGAGAAGATGGGAGTTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR CAA 90 bp | TGTGGTGGCAATGGGTATTGTGACCACCATCAAGCCTTGTGGCATGTGACAGCAGGAGAACCTCTCTGCTaGTGTGGTCAGCATCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: CGGNGYCDHHQALWHVTAGEPLC*CGQHLP Trigger: CGGGAGATGCTGACCACACAAGCAGAGAGGTTCTCC...TGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATTGCCACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS CCA 90 bp | CGAACATCTGGTCGATCTCCTCTTTGGAGAACCTCTCTGCTTGTGTaGTCAGCATCTCCCGGACATAGTCAGCCTTCAGTGACCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: RTSGRSPLWRTSLLV*SASPGHSQPSVTLC Trigger: GCAAAGGGTCACTGAAGGCTGACTATGTCCGGGAGATGCTGACCACACAAGCAGAGAGGTTCTCCAAAGAGGAGATCGACCAGATGTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014080.13 ENSMUST00000111751.8 |
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| CDS-3UTR CAA 90 bp | CAGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTATTGTGAAGGCTTCCTaGAACTCCTGGATCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: QSQDFLFICAQPWDGEWAIVKAS*NSWIWV Trigger: GACCCAGATCCAGGAGTTCAAGGAAGCCTTCACAAT...AGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR CAA 90 bp | GCCAGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGGGACCTGGAGCCTCTTaGATCATTTCATCGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: ARAKTSCLFAHSPGMESGGPGAS*IISSIS Trigger: AGAGATCGATGAAATGATCAAAGAGGCTCCAGGTCC...CCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR CAA 90 bp | GCCAGAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGTCGGGATCAAACACCTaGAATGCGTTGAGAATGGTC | + |
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Preference number: 5 (lower is better) Translates to: ARAKTSCLFAHSPGMESGSGSNT*NALRMV Trigger: GACCATTCTCAACGCATTCAAGGTGTTTGATCCCGA...CCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS-3UTR CAA 90 bp | GAGCCAAGACTTCCTGTTTATTTGCGCACAGCCCTGGGATGGAGAGTGGGCTGTTGGTCGATCTCCTCTTaGGAGAACCTCTCTGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: EPRLPVYLRTALGWRVGCWSISS*ENLSAC Trigger: ACAAGCAGAGAGGTTCTCCAAAGAGGAGATCGACCA...ACAGCCCACTCTCCATCCCAGGGCTGTGCGCAAATAAACAGGAAGTCTTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014080.13 |
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| CDS TCA 90 bp | CTCTGCTTGTGTGGTCAGCATCTCCCGGACATAGTCAGCCTTCAGTaGCCCTTTGCCCTCGGGATCAAACACCTTGAATGCGTTGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: LCLCGQHLPDIVSLQ*PFALGIKHLECVEN Trigger: ATTCTCAACGCATTCAAGGTGTTTGATCCCGAGGGCAAAGGGTCACTGAAGGCTGACTATGTCCGGGAGATGCTGACCACACAAGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014080.13 ENSMUST00000111750.8 ENSMUST00000111751.8 ENSMUST00000155612.8 |
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| CDS-3UTR CAA 90 bp | GGGCAACTCCCATCTTCTCCTACTGGTTCTCGTCTGTCTGAGCAGGATGACATCATTGTGAAGGCTTCCTaGAACTCCTGGATCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: GQLPSSPTGSRLSEQDDIIVKAS*NSWIWV Trigger: GACCCAGATCCAGGAGTTCAAGGAAGCCTTCACAAT...GATGTCATCCTGCTCAGACAGACGAGAACCAGTAGGAGAAGATGGGAGTTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR CAA 90 bp | CCACCATCAAGCCTTGTGGCATGTGACAGCAGATGTCGTCATCCCTCCTTGACAGGACCTGGAGCCTCTTaGATCATTTCATCGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: PPSSLVACDSRCRHPSLTGPGAS*IISSIS Trigger: AGAGATCGATGAAATGATCAAAGAGGCTCCAGGTCC...TGTCAAGGAGGGATGACGACATCTGCTGTCACATGCCACAAGGCTTGATGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR CAA 90 bp | ACCCCACATGGAGTAGGGTTGGATACAGTGGATGAGGGCAACTCCCATCTTCTCTCGGGATCAAACACCTaGAATGCGTTGAGAATGGTC | + |
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Preference number: 5 (lower is better) Translates to: TPHGVGLDTVDEGNSHLLSGSNT*NALRMV Trigger: GACCATTCTCAACGCATTCAAGGTGTTTGATCCCGA...GAGAAGATGGGAGTTGCCCTCATCCACTGTATCCAACCCTACTCCATGTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR CAA 90 bp | ACTGGTTCTCGTCTGTCTGAGCAGGATGACATCATCAACTTGCGGTCACAGCAGTGGTCGATCTCCTCTTaGGAGAACCTCTCTGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: TGSRLSEQDDIINLRSQQWSISS*ENLSAC Trigger: ACAAGCAGAGAGGTTCTCCAAAGAGGAGATCGACCA...CTGCTGTGACCGCAAGTTGATGATGTCATCCTGCTCAGACAGACGAGAACCAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111751.8 |
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| CDS-3UTR CAA 90 bp | AATGGGTATTGTGACCACCATCAAGCCTTGTGGCATGTGACAGCAGATGTCGTCATTGTGAAGGCTTCCTaGAACTCCTGGATCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: NGYCDHHQALWHVTADVVIVKAS*NSWIWV Trigger: GACCCAGATCCAGGAGTTCAAGGAAGCCTTCACAAT...GACGACATCTGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS-3UTR CAA 90 bp | AATGGGTATTGTGACCACCATCAAGCCTTGTGGCATGTGACAGCAGATGTCGTCTCGGGATCAAACACCTaGAATGCGTTGAGAATGGTC | + |
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Preference number: 5 (lower is better) Translates to: NGYCDHHQALWHVTADVVSGSNT*NALRMV Trigger: GACCATTCTCAACGCATTCAAGGTGTTTGATCCCGA...GACGACATCTGCTGTCACATGCCACAAGGCTTGATGGTGGTCACAATACCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS CCA 72 bp | GGTCGAGACGGGGTGTCTATAAAGGGGGCTGGGTGGTaGGAACACTGGAGACCCTGTACCTCCTCTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GRDGVSIKGAGW*EHWRPCTSSLE Trigger: CTCCAAAGAGGAGGTACAGGGTCTCCAGTGTTCCCACCACCCAGCCCCCTTTATAGACACCCCGTCTCGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS CCA 72 bp | GTCACTAGGTCGAGACGGGGTGTCTATAAAGGGGGCTaGGTGGTGGGAACACTGGAGACCCTGTACCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VTRSRRGVYKGG*VVGTLETLYLL Trigger: GAGGAGGTACAGGGTCTCCAGTGTTCCCACCACCCAGCCCCCTTTATAGACACCCCGTCTCGACCTAGTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS CCA 72 bp | CTAGGTCGAGACGGGGTGTCTATAAAGGGGGCTGGGTaGTGGGAACACTGGAGACCCTGTACCTCCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LGRDGVSIKGAG*WEHWRPCTSSL Trigger: CAAAGAGGAGGTACAGGGTCTCCAGTGTTCCCACCACCCAGCCCCCTTTATAGACACCCCGTCTCGACCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS CCA 72 bp | GGGGTGTCTATAAAGGGGGCTGGGTGGTGGGAACACTaGAGACCCTGTACCTCCTCTTTGGAGAACCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GVSIKGAGWWEH*RPCTSSLENLS Trigger: AGAGAGGTTCTCCAAAGAGGAGGTACAGGGTCTCCAGTGTTCCCACCACCCAGCCCCCTTTATAGACACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS CCA 72 bp | GGAGCTCCCGCCTTCTATCCGCTTCTTGGCTTTCTTTaGTGCCTGGGGAGTGAGTCTCTGGTACCCAGACAA | + |
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Preference number: 6 (lower is better) Translates to: GAPAFYPLLGFL*CLGSESLVPRQ Trigger: TTGTCTGGGTACCAGAGACTCACTCCCCAGGCACCAAAGAAAGCCAAGAAGCGGATAGAAGGCGGGAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153816.6 |
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| CDS CAA 72 bp | GAGAACACGTTGGAGCTCCCGCCTTCTATCCGCTTCTaGGCTTTCTTTGGTGCCTGGGGAGTGAGTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ENTLELPPSIRF*AFFGAWGVSLW Trigger: CCAGAGACTCACTCCCCAGGCACCAAAGAAAGCCAAGAAGCGGATAGAAGGCGGGAGCTCCAACGTGTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153816.6 |
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| CDS GCA 72 bp | CTGGAGACCCTGTACCTCCTCTTTGGAGAACCTCTCTaGTTGTGTGGTCAGCATCTCCCGGACATAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LETLYLLFGEPL*LCGQHLPDIVS Trigger: GCTGACTATGTCCGGGAGATGCTGACCACACAAGCAGAGAGGTTCTCCAAAGAGGAGGTACAGGGTCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS CCA 72 bp | GGGGAAAGGCTGCGAACATCTGGTCGATCTCCTCTTTaGAGAACCTCTCTGCTTGTGTGGTCAGCATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GERLRTSGRSPL*RTSLLVWSASP Trigger: GGGAGATGCTGACCACACAAGCAGAGAGGTTCTCCAAAGAGGAGATCGACCAGATGTTCGCAGCCTTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014080.13 ENSMUST00000111751.8 |
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| CDS CCA 72 bp | CCGCCTTCTATCCGCTTCTTGGCTTTCTTTGGTGCCTaGGGAGTGAGTCTCTGGTACCCAGACAACATGCGA | + |
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Preference number: 6 (lower is better) Translates to: PPSIRFLAFFGA*GVSLWYPDNMR Trigger: TCGCATGTTGTCTGGGTACCAGAGACTCACTCCCCAGGCACCAAAGAAAGCCAAGAAGCGGATAGAAGGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153816.6 |
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| CDS TCA 72 bp | TGTGGTCAGCATCTCCCGGACATAGTCAGCCTTCAGTaGCCCTTTGCCCTCGGGATCAAACACCTTGAATGC | + |
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Preference number: 6 (lower is better) Translates to: CGQHLPDIVSLQ*PFALGIKHLEC Trigger: GCATTCAAGGTGTTTGATCCCGAGGGCAAAGGGTCACTGAAGGCTGACTATGTCCGGGAGATGCTGACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014080.13 ENSMUST00000111750.8 ENSMUST00000111751.8 ENSMUST00000155612.8 |
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| CDS TCA 72 bp | CTATCCGCTTCTTGGCTTTCTTTGGTGCCTGGGGAGTaGGTCTCTGGTACCCAGACAACATGCGAGGCGAAA | + |
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Preference number: 6 (lower is better) Translates to: LSASWLSLVPGE*VSGTQTTCEAK Trigger: TTTCGCCTCGCATGTTGTCTGGGTACCAGAGACTCACTCCCCAGGCACCAAAGAAAGCCAAGAAGCGGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153816.6 |
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| CDS CAA 72 bp | GAGACCCTGTACCTCCTCTTTGGAGAACCTCTCTGCTaGTGTGGTCAGCATCTCCCGGACATAGTCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: ETLYLLFGEPLC*CGQHLPDIVSL Trigger: AAGGCTGACTATGTCCGGGAGATGCTGACCACACAAGCAGAGAGGTTCTCCAAAGAGGAGGTACAGGGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111750.8 |
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| CDS CCA 72 bp | TTCTTGGCTTTCTTTGGTGCCTGGGGAGTGAGTCTCTaGTACCCAGACAACATGCGAGGCGAAATGATACCC | + |
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Preference number: 6 (lower is better) Translates to: FLAFFGAWGVSL*YPDNMRGEMIP Trigger: GGGTATCATTTCGCCTCGCATGTTGTCTGGGTACCAGAGACTCACTCCCCAGGCACCAAAGAAAGCCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153816.6 |
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