RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYL12B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034868

Ensembl transcript IDs: ENSMUST00000038446.10, ENSMUST00000233004.2

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCACCACACGGTATTTATGTGGCTTTGCCTCTTCTGTCTGTCCTaGCCCTTAGTCAGCAACACTCACAAGAGCATGCTGGGTAACGGG +
Preference number: 1 (lower is better)
Translates to: GHHTVFMWLCLFCLS*PLVSNTHKSMLGNG
Trigger: CCCGTTACCCAGCATGCTCTTGTGAGTGTTGCTGACTAAGGGCCAGGACAGACAGAAGAGGCAAAGCCACATAAATACCGTGTGGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR GCA 90 bp ACCAGGCTGTATCTCCCAGGGAGCGTTTCTGTCCACTTTCCACCATaGAGTGTTCTTGGTCACCACACGGTATTTATGTGGCTTTGCCTC +
Preference number: 1 (lower is better)
Translates to: TRLYLPGSVSVHFPP*SVLGHHTVFMWLCL
Trigger: GAGGCAAAGCCACATAAATACCGTGTGGTGACCAAGAACACTGCATGGTGGAAAGTGGACAGAAACGCTCCCTGGGAGATACAGCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CCA 90 bp TCTCCCAGGGAGCGTTTCTGTCCACTTTCCACCATGCAGTGTTCTTaGTCACCACACGGTATTTATGTGGCTTTGCCTCTTCTGTCTGTC +
Preference number: 1 (lower is better)
Translates to: SPRERFCPLSTMQCS*SPHGIYVALPLLSV
Trigger: GACAGACAGAAGAGGCAAAGCCACATAAATACCGTGTGGTGACCAAGAACACTGCATGGTGGAAAGTGGACAGAAACGCTCCCTGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CCA 90 bp CACTTTCCACCATGCAGTGTTCTTGGTCACCACACGGTATTTATGTaGCTTTGCCTCTTCTGTCTGTCCTGGCCCTTAGTCAGCAACACT +
Preference number: 1 (lower is better)
Translates to: HFPPCSVLGHHTVFM*LCLFCLSWPLVSNT
Trigger: AGTGTTGCTGACTAAGGGCCAGGACAGACAGAAGAGGCAAAGCCACATAAATACCGTGTGGTGACCAAGAACACTGCATGGTGGAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CAA 90 bp GACTGCATCCCTGGATGCTGTGGTTCCCTCGATGGTTTTACATCTTaGCTGCCTCTCTGTTCTACGCGACACCGCAACAATGAGCTTTTC +
Preference number: 2 (lower is better)
Translates to: DCIPGCCGSLDGFTS*LPLCSTRHRNNELF
Trigger: GAAAAGCTCATTGTTGCGGTGTCGCGTAGAACAGAGAGGCAGCAAAGATGTAAAACCATCGAGGGAACCACAGCATCCAGGGATGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CAA 90 bp ATCTCCCAGGGAGCGTTTCTGTCCACTTTCCACCATGCAGTGTTCTaGGTCACCACACGGTATTTATGTGGCTTTGCCTCTTCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: ISQGAFLSTFHHAVF*VTTRYLCGFASSVC
Trigger: ACAGACAGAAGAGGCAAAGCCACATAAATACCGTGTGGTGACCAAGAACACTGCATGGTGGAAAGTGGACAGAAACGCTCCCTGGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CAA 90 bp TACAGTCATGGGATTCCCTATCTCGACTCTACATCGATGACACACTaGAAAGCAATCTTCGTGTTCTCATTCATTACTGTCATTGTGCTT +
Preference number: 2 (lower is better)
Translates to: YSHGIPYLDSTSMTH*KAIFVFSFITVIVL
Trigger: AAGCACAATGACAGTAATGAATGAGAACACGAAGATTGCTTTCAAGTGTGTCATCGATGTAGAGTCGAGATAGGGAATCCCATGACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR-3UTR TCA 90 bp TTGAAAGCAATCTTCGTGTTCTCATTCATTACTGTCATTGTGCTTTGGGTGAGATATGCACATGCTAAGTaGCAGAAAGGGCCTGGAATA +
Preference number: 2 (lower is better)
Translates to: LKAIFVFSFITVIVLWVRYAHAK*QKGPGI
Trigger: TATTCCAGGCCCTTTCTGTCACTTAGCATGTGCATA...TCTCACCCAAAGCACAATGACAGTAATGAATGAGAACACGAAGATTGCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR TCA 72 bp AGGATAGCCGTGTCTGCTGCACCAGCTCAAGCCAAGTaGCTGCATCCCTGGATGCTGTGGTTCCCTCGATGG +
Preference number: 3 (lower is better)
Translates to: RIAVSAAPAQAK*LHPWMLWFPRW
Trigger: CCATCGAGGGAACCACAGCATCCAGGGATGCAGTCACTTGGCTTGAGCTGGTGCAGCAGACACGGCTATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR GCA 72 bp ACTGGAGGTCAGTGGGCCAAGGATAGCCGTGTCTGCTaGACCAGCTCAAGCCAAGTGACTGCATCCCTGGAT +
Preference number: 3 (lower is better)
Translates to: TGGQWAKDSRVC*TSSSQVTASLD
Trigger: ATCCAGGGATGCAGTCACTTGGCTTGAGCTGGTGCAGCAGACACGGCTATCCTTGGCCCACTGACCTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CCA 72 bp CCATGCAGTGTTCTTGGTCACCACACGGTATTTATGTaGCTTTGCCTCTTCTGTCTGTCCTGGCCCTTAGTC +
Preference number: 3 (lower is better)
Translates to: PCSVLGHHTVFM*LCLFCLSWPLV
Trigger: GACTAAGGGCCAGGACAGACAGAAGAGGCAAAGCCACATAAATACCGTGTGGTGACCAAGAACACTGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR GCA 72 bp AGTGTTCTTGGTCACCACACGGTATTTATGTGGCTTTaGCTCTTCTGTCTGTCCTGGCCCTTAGTCAGCAAC +
Preference number: 3 (lower is better)
Translates to: SVLGHHTVFMWL*LFCLSWPLVSN
Trigger: GTTGCTGACTAAGGGCCAGGACAGACAGAAGAGGCAAAGCCACATAAATACCGTGTGGTGACCAAGAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR GCA 72 bp TATCTCCCAGGGAGCGTTTCTGTCCACTTTCCACCATaGAGTGTTCTTGGTCACCACACGGTATTTATGTGG +
Preference number: 3 (lower is better)
Translates to: YLPGSVSVHFPP*SVLGHHTVFMW
Trigger: CCACATAAATACCGTGTGGTGACCAAGAACACTGCATGGTGGAAAGTGGACAGAAACGCTCCCTGGGAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR GCA 72 bp TCATTCATTACTGTCATTGTGCTTTGGGTGAGAGTCTaGCTTGCACTAGGATCGCTTCCTGTCAAGCAGACC +
Preference number: 3 (lower is better)
Translates to: SFITVIVLWVRV*LALGSLPVKQT
Trigger: GGTCTGCTTGACAGGAAGCGATCCTAGTGCAAGGCAGACTCTCACCCAAAGCACAATGACAGTAATGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CCA 72 bp GAGCGTTTCTGTCCACTTTCCACCATGCAGTGTTCTTaGTCACCACACGGTATTTATGTGGCTTTGCCTCTT +
Preference number: 3 (lower is better)
Translates to: ERFCPLSTMQCS*SPHGIYVALPL
Trigger: AAGAGGCAAAGCCACATAAATACCGTGTGGTGACCAAGAACACTGCATGGTGGAAAGTGGACAGAAACGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR-3UTR CAA 90 bp CGTGTTCTCATTCATTACTGTCATTGTGCTTTGGGTGAGAGTCTGCCTTGCACTGGTATTTATGTGGCTTaGCCTCTTCTGTCTGTCCTG +
Preference number: 3 (lower is better)
Translates to: RVLIHYCHCALGESLPCTGIYVA*PLLSVL
Trigger: CAGGACAGACAGAAGAGGCAAAGCCACATAAATACC...AGTGCAAGGCAGACTCTCACCCAAAGCACAATGACAGTAATGAATGAGAACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CCA 72 bp ATCTTCGTGTTCTCATTCATTACTGTCATTGTGCTTTaGGTGAGAGTCTGCCTTGCACTAGGATCGCTTCCT +
Preference number: 3 (lower is better)
Translates to: IFVFSFITVIVL*VRVCLALGSLP
Trigger: AGGAAGCGATCCTAGTGCAAGGCAGACTCTCACCCAAAGCACAATGACAGTAATGAATGAGAACACGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR TCA 72 bp ATGTGGCAAAGTCTGAATTTTACAAAGCTGGAAACCTaGAGAAAGGAGCACCCCACACTATCGCTCGTTTGT +
Preference number: 3 (lower is better)
Translates to: MWQSLNFTKLET*RKEHPTLSLVC
Trigger: ACAAACGAGCGATAGTGTGGGGTGCTCCTTTCTTCAGGTTTCCAGCTTTGTAAAATTCAGACTTTGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
CDS-3UTR GCA 90 bp CTGAGACAGGAAGTGAGCAAGCAAACGCAAGAGGCGTGTCAGCCGCCGCAGCTCGACGCCAGCATGTCGTaGAGGTCCTCCTTGTCAATG +
Preference number: 4 (lower is better)
Translates to: LRQEVSKQTQEACQPPQLDASMS*RSSLSM
Trigger: CATTGACAAGGAGGACCTGCACGACATGCTGGCGTC...GAGCTGCGGCGGCTGACACGCCTCTTGCGTTTGCTTGCTCACTTCCTGTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038446.10
ENSMUST00000233004.2
CDS-3UTR GCA 90 bp GCAGACCTCAACCAGGCTGTATCTCCCAGGGAGCGTTTCTGTCCACTTTCCACCAATCCTCCTGGATGGTaGCTGTGGCTTCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: ADLNQAVSPRERFCPLSTNPPGW*LWLPHQ
Trigger: TTGATGAGGAAGCCACAGGCACCATCCAGGAGGATT...GGTGGAAAGTGGACAGAAACGCTCCCTGGGAGATACAGCCTGGTTGAGGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
CDS-3UTR GCA 90 bp TGTGTGTCTGAGACAGGAAGTGAGCAAGCAAACGCAAGAGGCGTGTCAGCCGCCAATCCTCCTGGATGGTaGCTGTGGCTTCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: CVSETGSEQANARGVSAANPPGW*LWLPHQ
Trigger: TTGATGAGGAAGCCACAGGCACCATCCAGGAGGATT...GGCGGCTGACACGCCTCTTGCGTTTGCTTGCTCACTTCCTGTCTCAGACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038446.10
ENSMUST00000233004.2
CDS-3UTR CCA 90 bp GGGTGTGTGTGTCTGAGACAGGAAGTGAGCAAGCAAACGCAAGAGGCGTGTCAGGGTAATCCTCCTGGATaGTGCCTGTGGCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GCVCLRQEVSKQTQEACQGNPPG*CLWLPH
Trigger: ATGAGGAAGCCACAGGCACCATCCAGGAGGATTACC...CTGACACGCCTCTTGCGTTTGCTTGCTCACTTCCTGTCTCAGACACACACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038446.10
ENSMUST00000233004.2
CDS-3UTR CCA 90 bp CCACACGGTATTTATGTGGCTTTGCCTCTTCTGTCTGTCCTGGCCCTTAGTCAGGGTAATCCTCCTGGATaGTGCCTGTGGCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PHGIYVALPLLSVLALSQGNPPG*CLWLPH
Trigger: ATGAGGAAGCCACAGGCACCATCCAGGAGGATTACC...CTGACTAAGGGCCAGGACAGACAGAAGAGGCAAAGCCACATAAATACCGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CAA 72 bp CCTGGATGCTGTGGTTCCCTCGATGGTTTTACATCTTaGCTGCCTCTCTGTTCTACGCGACACCGCAACAAT +
Preference number: 4 (lower is better)
Translates to: PGCCGSLDGFTS*LPLCSTRHRNN
Trigger: ATTGTTGCGGTGTCGCGTAGAACAGAGAGGCAGCAAAGATGTAAAACCATCGAGGGAACCACAGCATCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CAA 72 bp CAGTGTTCTTGGTCACCACACGGTATTTATGTGGCTTaGCCTCTTCTGTCTGTCCTGGCCCTTAGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: QCSWSPHGIYVA*PLLSVLALSQQ
Trigger: TTGCTGACTAAGGGCCAGGACAGACAGAAGAGGCAAAGCCACATAAATACCGTGTGGTGACCAAGAACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CAA 72 bp GGAGCGTTTCTGTCCACTTTCCACCATGCAGTGTTCTaGGTCACCACACGGTATTTATGTGGCTTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GAFLSTFHHAVF*VTTRYLCGFAS
Trigger: AGAGGCAAAGCCACATAAATACCGTGTGGTGACCAAGAACACTGCATGGTGGAAAGTGGACAGAAACGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
CDS-3UTR GCA 90 bp AAAGTACCTCTTGGTACCCTACACCAGTCTTTTCAATCCGGCCATAATGAGACAGACGCCAGCATGTCGTaGAGGTCCTCCTTGTCAATG +
Preference number: 4 (lower is better)
Translates to: KVPLGTLHQSFQSGHNETDASMS*RSSLSM
Trigger: CATTGACAAGGAGGACCTGCACGACATGCTGGCGTC...TGTCTCATTATGGCCGGATTGAAAAGACTGGTGTAGGGTACCAAGAGGTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CAA 72 bp AATCTTCGTGTTCTCATTCATTACTGTCATTGTGCTTaGGGTGAGAGTCTGCCTTGCACTAGGATCGCTTCC +
Preference number: 4 (lower is better)
Translates to: NLRVLIHYCHCA*GESLPCTRIAS
Trigger: GGAAGCGATCCTAGTGCAAGGCAGACTCTCACCCAAAGCACAATGACAGTAATGAATGAGAACACGAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CAA 72 bp AACCTGAAGAAAGGAGCACCCCACACTATCGCTCGTTaGTTTTATACTCCACTTGAGTCAGCATCATCTTTA +
Preference number: 4 (lower is better)
Translates to: NLKKGAPHTIAR*FYTPLESASSL
Trigger: TAAAGATGATGCTGACTCAAGTGGAGTATAAAACAAACGAGCGATAGTGTGGGGTGCTCCTTTCTTCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CAA 72 bp GGGATTCCCTATCTCGACTCTACATCGATGACACACTaGAAAGCAATCTTCGTGTTCTCATTCATTACTGTC +
Preference number: 4 (lower is better)
Translates to: GIPYLDSTSMTH*KAIFVFSFITV
Trigger: GACAGTAATGAATGAGAACACGAAGATTGCTTTCAAGTGTGTCATCGATGTAGAGTCGAGATAGGGAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10
3UTR CAA 72 bp CTATTTCTGTCTAGTCTTAGTCACACGACAAGCCACTaGCATTTCCCTAGAAGCAGCGAGATAAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: LFLSSLSHTTSH*HFPRSSEIKIK
Trigger: TTTGATCTTTATCTCGCTGCTTCTAGGGAAATGCAAGTGGCTTGTCGTGTGACTAAGACTAGACAGAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038446.10