Pregenerated sensors for MYL12A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024048Ensembl transcript IDs: ENSMUST00000024846.13, ENSMUST00000123686.8, ENSMUST00000148960.8, ENSMUST00000232766.2, ENSMUST00000233089.2, ENSMUST00000233798.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGTCCGTCCAGCTGGCGGCAGAGCTAATGCAGGGTCACAATTCTaGAGGAACTATCTTCCAAAAGAAAGACAAAGTCTAGGGCCCCCA | + |
|
Preference number: 1 (lower is better) Translates to: QVRPAGGRANAGSQF*RNYLPKERQSLGPP Trigger: TGGGGGCCCTAGACTTTGTCTTTCTTTTGGAAGATAGTTCCTGCAGAATTGTGACCCTGCATTAGCTCTGCCGCCAGCTGGACGGACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148960.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGAGAAATGAACAGGAGCAGAGAAAACCAGGATTGCTTTAATAACACAACTTCAGAAATACCCCAATaGCAACGGGAGCAATGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: EGEMNRSRENQDCFNNTTSEIPQ*QREQWA Trigger: AGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGA...AGTTGTGTTATTAAAGCAATCCTGGTTTTCTCTGCTCCTGTTCATTTCTCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148960.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATATATTGATTCTGGGCTGCAGTTATTACAAGGGACAAGACTGCCTGTAAGTACTTTCTCATCACAATaGCAGAAGGTCCCATTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KYIDSGLQLLQGTRLPVSTFSSQ*QKVPFP Trigger: TGGAAATGGGACCTTCTGTCATTGTGATGAGAAAGT...ACTTACAGGCAGTCTTGTCCCTTGTAATAACTGCAGCCCAGAATCAATATATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024846.13 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| 3UTR CCA 72 bp | CAGTCGGACCAAACCCTGACAGGACTGTCATTCACTTaGCCCACGGTGCTTAGAGAGAAAGGCGTACGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QSDQTLTGLSFT*PTVLREKGVRE Trigger: TTCACGTACGCCTTTCTCTCTAAGCACCGTGGGCCAAGTGAATGACAGTCCTGTCAGGGTTTGGTCCGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148960.8 |
||
| 3UTR TCA 72 bp | GACCTCACTTTCCCAGGCATGCAGCCACAGCTGTTCTaGCTGTGGGTAGGTCAGGAATGTCTAACATTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DLTFPGMQPQLF*LWVGQECLTFS Trigger: TGAGAATGTTAGACATTCCTGACCTACCCACAGTCAGAACAGCTGTGGCTGCATGCCTGGGAAAGTGAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148960.8 |
||
| 3UTR GCA 72 bp | GAGGGAGAAATGAACAGGAGCAGAGAAAACCAGGATTaGTTTAATAACACAACTGGAAGCAGTCGGACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: EGEMNRSRENQD*FNNTTGSSRTK Trigger: TTTGGTCCGACTGCTTCCAGTTGTGTTATTAAAGCAATCCTGGTTTTCTCTGCTCCTGTTCATTTCTCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148960.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGCAGCTGGGCCTCGTTCATCATaGCGTCCAGGTATTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQKYPNGNGSNGLEAAAAGPRSS*RPGIRQ Trigger: CTGACGAATACCTGGACGCCATGATGAACGAGGCCC...AGCTGCGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGCAGCTCGGTAATCCTCCTGGATaGTGCCGATGGCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRNTPMATGAMGWKPPQLGNPPG*CRWLPH Trigger: ATGAGGAAGCCATCGGCACCATCCAGGAGGATTACC...GAGCTGCGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | AAAATCTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGCACATGGCGAACACATTaGAGGTTGCGCGCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KISEIPQWQREQWAGSRRTWRTH*RLRAEG Trigger: GCCCTCAGCGCGCAACCTCCAATGTGTTCGCCATGT...GCGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGCAACATGGCGAACACATTaGAGGTTGCGCGCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSQKYPNGNGSNGLEAAATWRTH*RLRAEG Trigger: GCCCTCAGCGCGCAACCTCCAATGTGTTCGCCATGT...TGCGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | AATCTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGCAGGGGCCTCGTTCATCATaGCGTCCAGGTATTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLRNTPMATGAMGWKPPQGPRSS*RPGIRQ Trigger: CTGACGAATACCTGGACGCCATGATGAACGAGGCCC...CTGCGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGCAGCTGGTAATCCTCCTGGATaGTGCCGATGGCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQKYPNGNGSNGLEAAAAGNPPG*CRWLPH Trigger: ATGAGGAAGCCATCGGCACCATCCAGGAGGATTACC...AGCTGCGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGCAGCGGTAATCCTCCTGGATaGTGCCGATGGCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISEIPQWQREQWAGSRRSGNPPG*CRWLPH Trigger: ATGAGGAAGCCATCGGCACCATCCAGGAGGATTACC...GCTGCGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGCAGCTAATCCTCCTGGATGGTaGCGATGGCTTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQKYPNGNGSNGLEAAAANPPGW*RWLPHQ Trigger: TTGATGAGGAAGCCATCGGCACCATCCAGGAGGATT...AGCTGCGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGCAGCAATCCTCCTGGATGGTaGCGATGGCTTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISEIPQWQREQWAGSRRSNPPGW*RWLPHQ Trigger: TTGATGAGGAAGCCATCGGCACCATCCAGGAGGATT...GCTGCGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGCAGGTAATCCTCCTGGATaGTGCCGATGGCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSQKYPNGNGSNGLEAAAGNPPG*CRWLPH Trigger: ATGAGGAAGCCATCGGCACCATCCAGGAGGATTACC...TGCGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | GAAAATCTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGGGTAATCCTCCTGGATaGTGCCGATGGCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ENLRNTPMATGAMGWKPPGNPPG*CRWLPH Trigger: ATGAGGAAGCCATCGGCACCATCCAGGAGGATTACC...CGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGATTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCACGGTGCTTAGAGAGAAAGGCGTACGTGAAACTAAAAGTCAAGTGGCAAGGGCCTCGTTCATCATaGCGTCCAGGTATTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPRCLERKAYVKLKVKWQGPRSS*RPGIRQ Trigger: CTGACGAATACCTGGACGCCATGATGAACGAGGCCC...TTGCCACTTGACTTTTAGTTTCACGTACGCCTTTCTCTCTAAGCACCGTGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148960.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGCAGTAAAGCTAGGGCATGCATTGGGCTCCAGGAGAAAATCTCAGAAAACATGGCGAACACATTaGAGGTTGCGCGCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKAVKLGHALGSRRKSQKTWRTH*RLRAEG Trigger: GCCCTCAGCGCGCAACCTCCAATGTGTTCGCCATGT...TTTCTGAGATTTTCTCCTGGAGCCCAATGCATGCCCTAGCTTTACTGCTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000024846.13 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAAAGCAGTAAAGCTAGGGCATGCATTGGGCTCCAGGAGAAAATCTCAGAAGGGCCTCGTTCATCATaGCGTCCAGGTATTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKSSKARACIGLQEKISEGPRSS*RPGIRQ Trigger: CTGACGAATACCTGGACGCCATGATGAACGAGGCCC...TTCTGAGATTTTCTCCTGGAGCCCAATGCATGCCCTAGCTTTACTGCTTTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024846.13 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGAGAGAAAGGCGTACGTGAAACTAAAAGTCAAGTGGCAAATAACGCTAACATGGCGAACACATTaGAGGTTGCGCGCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLERKAYVKLKVKWQITLTWRTH*RLRAEG Trigger: GCCCTCAGCGCGCAACCTCCAATGTGTTCGCCATGT...TAGCGTTATTTGCCACTTGACTTTTAGTTTCACGTACGCCTTTCTCTCTAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148960.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGCAGTTATTACAAGGGACAAGACTGCCTGTAAGTTAAATGAACTTACTACATGGCGAACACATTaGAGGTTGCGCGCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WAAVITRDKTACKLNELTTWRTH*RLRAEG Trigger: GCCCTCAGCGCGCAACCTCCAATGTGTTCGCCATGT...AGTAAGTTCATTTAACTTACAGGCAGTCTTGTCCCTTGTAATAACTGCAGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024846.13 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGCAGTTATTACAAGGGACAAGACTGCCTGTAAGTTAAATGAACTTACTGGGCCTCGTTCATCATaGCGTCCAGGTATTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WAAVITRDKTACKLNELTGPRSS*RPGIRQ Trigger: CTGACGAATACCTGGACGCCATGATGAACGAGGCCC...AGTAAGTTCATTTAACTTACAGGCAGTCTTGTCCCTTGTAATAACTGCAGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024846.13 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | CACAATGACAGAAGGTCCCATTTCCAGTATTATAAGGTACATGTGGCCCAAAATGGGCCTCGTTCATCATaGCGTCCAGGTATTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HNDRRSHFQYYKVHVAQNGPRSS*RPGIRQ Trigger: CTGACGAATACCTGGACGCCATGATGAACGAGGCCC...ATTTTGGGCCACATGTACCTTATAATACTGGAAATGGGACCTTCTGTCATTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024846.13 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTAGAGAGAAAGGCGTACGTGAAACTAAAAGTCAAGTGGCAAATAACGCTAAATCCTCCTGGATGGTaGCGATGGCTTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: CLERKAYVKLKVKWQITLNPPGW*RWLPHQ Trigger: TTGATGAGGAAGCCATCGGCACCATCCAGGAGGATT...TAGCGTTATTTGCCACTTGACTTTTAGTTTCACGTACGCCTTTCTCTCTAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148960.8 |
||
| CDS-3UTR GCA 90 bp | CACAATGACAGAAGGTCCCATTTCCAGTATTATAAGGTACATGTGGCCCAAAATAATCCTCCTGGATGGTaGCGATGGCTTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HNDRRSHFQYYKVHVAQNNPPGW*RWLPHQ Trigger: TTGATGAGGAAGCCATCGGCACCATCCAGGAGGATT...ATTTTGGGCCACATGTACCTTATAATACTGGAAATGGGACCTTCTGTCATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024846.13 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGTTATTACAAGGGACAAGACTGCCTGTAAGTTAAATGAACTTACTTTCGGTAATCCTCCTGGATaGTGCCGATGGCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AAVITRDKTACKLNELTFGNPPG*CRWLPH Trigger: ATGAGGAAGCCATCGGCACCATCCAGGAGGATTACC...GAAAGTAAGTTCATTTAACTTACAGGCAGTCTTGTCCCTTGTAATAACTGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024846.13 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCAGTTATTACAAGGGACAAGACTGCCTGTAAGTTAAATGAACTTACTTTCAATCCTCCTGGATGGTaGCGATGGCTTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: AAVITRDKTACKLNELTFNPPGW*RWLPHQ Trigger: TTGATGAGGAAGCCATCGGCACCATCCAGGAGGATT...GAAAGTAAGTTCATTTAACTTACAGGCAGTCTTGTCCCTTGTAATAACTGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024846.13 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CAA 90 bp | AAATCTCAGAAATACCCCAATGGCAACGGGAGCAATGGGCTGGAAGCCGCCGCAATGTTAAAGGCTTCTTaGAACTCCTGGATCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KSQKYPNGNGSNGLEAAAMLKAS*NSWIWD Trigger: GTCCCAGATCCAGGAGTTCAAAGAAGCCTTTAACAT...TGCGGCGGCTTCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024846.13 ENSMUST00000123686.8 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CAA 90 bp | CACAATGACAGAAGGTCCCATTTCCAGTATTATAAGGTACATGTGGCCCAAAATATGTTAAAGGCTTCTTaGAACTCCTGGATCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HNDRRSHFQYYKVHVAQNMLKAS*NSWIWD Trigger: GTCCCAGATCCAGGAGTTCAAAGAAGCCTTTAACAT...ATTTTGGGCCACATGTACCTTATAATACTGGAAATGGGACCTTCTGTCATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024846.13 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCAGTTATTACAAGGGACAAGACTGCCTGTAAGTTAAATGAACTTACTTTCATGTTAAAGGCTTCTTaGAACTCCTGGATCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AAVITRDKTACKLNELTFMLKAS*NSWIWD Trigger: GTCCCAGATCCAGGAGTTCAAAGAAGCCTTTAACAT...GAAAGTAAGTTCATTTAACTTACAGGCAGTCTTGTCCCTTGTAATAACTGCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024846.13 ENSMUST00000148960.8 ENSMUST00000232766.2 ENSMUST00000233089.2 ENSMUST00000233798.2 |
||