Pregenerated sensors for MYL10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005474Ensembl transcript IDs: ENSMUST00000005611.10, ENSMUST00000196068.5, ENSMUST00000196436.5, ENSMUST00000197186.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAACCCCATCTTaGCTGACTCCAGGTATGGAGGAGACACATCTAGTCCTTCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: TYDSPVLPPAHPTPS*LTPGMEETHLVLLL Trigger: GAGGAGAAGGACTAGATGTGTCTCCTCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196068.5 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTGCCCACCCAACCCCATCTTGGCTGACTCCAGGTATGGAGGAGACACATTCCGGACTCCGGGGGTaGTGGAGACTGTTTCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: PPAHPTPSWLTPGMEETHSGLRG*WRLFPY Trigger: GTAGGGAAACAGTCTCCATCACCCCCGGAGTCCGGA...ATGTGTCTCCTCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTGGGCAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTGCCCACCCAACCCCATCTTGGCTGACTCCAGGTATGGAGGAGACACATCAACCCCATCTTGGCTaGCTCCAGGTATGGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PPAHPTPSWLTPGMEETHQPHLG*LQVWRR Trigger: TCTCCTCCATACCTGGAGTCAGCCAAGATGGGGTTG...ATGTGTCTCCTCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTGGGCAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAATCCGGACTCCGGGGGTaGTGGAGACTGTTTCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: METVSLPMIALYCPLPTQSGLRG*WRLFPY Trigger: GTAGGGAAACAGTCTCCATCACCCCCGGAGTCCGGA...TTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTCTCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCCAGGTATGGAGGAGACACATCTAGTCCTTCTCCTCGCCGTGTGTGATGACATGATAGCCCTGTACTaGCCCCTGCCCACCCAACCC | + |
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Preference number: 2 (lower is better) Translates to: TPGMEETHLVLLLAVCDDMIALY*PLPTQP Trigger: GGGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCAT...GTCATCACACACGGCGAGGAGAAGGACTAGATGTGTCTCCTCCATACCTGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196068.5 |
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| 3UTR-3UTR GCA 90 bp | CACATCTCTGTGTTATTTATTCCCACTTCAGCTCCGGACTCCGGGGGTGATGGAATGATAGCCCTGTACTaGCCCCTGCCCACCCAACCC | + |
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Preference number: 2 (lower is better) Translates to: HISVLFIPTSAPDSGGDGMIALY*PLPTQP Trigger: GGGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCAT...TCCATCACCCCCGGAGTCCGGAGCTGAAGTGGGAATAAATAACACAGAGATGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| 3UTR-3UTR CCA 90 bp | CACATCTCTGTGTTATTTATTCCCACTTCAGCTCCGGACTCCGGGGGTGATGGACACCCAACCCCATCTTaGCTGACTCCAGGTATGGAG | + |
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Preference number: 2 (lower is better) Translates to: HISVLFIPTSAPDSGGDGHPTPS*LTPGME Trigger: CTCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTG...TCCATCACCCCCGGAGTCCGGAGCTGAAGTGGGAATAAATAACACAGAGATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| 3UTR-3UTR CCA 90 bp | ACATCTCTGTGTTATTTATTCCCACTTCAGCTCCGGACTCCGGGGGTGATGGAGCACCCAACCCCATCTTaGCTGACTCCAGGTATGGAG | + |
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Preference number: 2 (lower is better) Translates to: TSLCYLFPLQLRTPGVMEHPTPS*LTPGME Trigger: CTCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTG...CTCCATCACCCCCGGAGTCCGGAGCTGAAGTGGGAATAAATAACACAGAGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| 3UTR-3UTR CAA 90 bp | ACATCTCTGTGTTATTTATTCCCACTTCAGCTCCGGACTCCGGGGGTGATGGAGCCACCCAACCCCATCTaGGCTGACTCCAGGTATGGA | + |
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Preference number: 3 (lower is better) Translates to: TSLCYLFPLQLRTPGVMEPPNPI*ADSRYG Trigger: TCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTGG...CTCCATCACCCCCGGAGTCCGGAGCTGAAGTGGGAATAAATAACACAGAGATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| 3UTR-3UTR CAA 90 bp | CACATCTCTGTGTTATTTATTCCCACTTCAGCTCCGGACTCCGGGGGTGATGGACCACCCAACCCCATCTaGGCTGACTCCAGGTATGGA | + |
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Preference number: 3 (lower is better) Translates to: HISVLFIPTSAPDSGGDGPPNPI*ADSRYG Trigger: TCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTGG...TCCATCACCCCCGGAGTCCGGAGCTGAAGTGGGAATAAATAACACAGAGATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR GCA 90 bp | TTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAACCCCATCTTGGCAGCCAGCCACTCCCTaGCTTGTCCCCAGAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: FPTYDSPVLPPAHPTPSWQPATP*LVPREG Trigger: GCCCTCTCTGGGGACAAGGCAGGGAGTGGCTGGCTG...CCAAGATGGGGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196068.5 |
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| CDS-3UTR TCA 90 bp | ATCTGGCGGGAAAGCTGCAAACATCTGCTTGACCTCCTCCTCACTGAACCGGTCCGCAGTGGCTGCCCTTaGGTTTCTCCCCAAACATGG | + |
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Preference number: 4 (lower is better) Translates to: IWRESCKHLLDLLLTEPVRSGCP*VSPQTW Trigger: CCATGTTTGGGGAGAAACTCAAGGGCAGCCACTGCG...GACCGGTTCAGTGAGGAGGAGGTCAAGCAGATGTTTGCAGCTTTCCCGCCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196068.5 |
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| CDS-3UTR GCA 90 bp | CCCCCTGCCCACCCAACCCCATCTTGGCTGACTCCAGGTATGGAGGAGACACATATTTATGCGACCCAGTaGAGCAAAGGTGTCCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PPAHPTPSWLTPGMEETHIYATQ*SKGVPQ Trigger: CTGAGGGACACCTTTGCTGCACTGGGTCGCATAAAT...ATGTGTCTCCTCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTGGGCAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CCA 90 bp | CCCCCTGCCCACCCAACCCCATCTTGGCTGACTCCAGGTATGGAGGAGACACATGTTGCCACAGACATCTaGCGGGAAAGCTGCAAACAT | + |
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Preference number: 4 (lower is better) Translates to: PPAHPTPSWLTPGMEETHVATDI*RESCKH Trigger: ATGTTTGCAGCTTTCCCGCCAGATGTCTGTGGCAAC...ATGTGTCTCCTCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTGGGCAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR TCA 90 bp | CCCCCTGCCCACCCAACCCCATCTTGGCTGACTCCAGGTATGGAGGAGACACATCCAATTCCTCGTTCTTaGCATTTATGCGACCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PPAHPTPSWLTPGMEETHPIPRS*HLCDPV Trigger: CACTGGGTCGCATAAATGTCAAGAACGAGGAATTGG...ATGTGTCTCCTCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTGGGCAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR GCA 90 bp | TTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAACCCCATCTTGGATTTATGCGACCCAGTaGAGCAAAGGTGTCCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FPTYDSPVLPPAHPTPSWIYATQ*SKGVPQ Trigger: CTGAGGGACACCTTTGCTGCACTGGGTCGCATAAAT...CCAAGATGGGGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR GCA 90 bp | GCCCCCTGCCCACCCAACCCCATCTTGGCTGACTCCAGGTATGGAGGAGACACAAACACTTTGAAGGCGTaGAGTATAGTCTCTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: APCPPNPILADSRYGGDTNTLKA*SIVSSG Trigger: CCCAGAAGAGACTATACTGCACGCCTTCAAAGTGTT...TGTGTCTCCTCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTGGGCAGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR GCA 90 bp | GGAGACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAACCTCCTGTAGTCTAAGTTaGCACAGACATCTGGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: GDCFPTYDSPVLPPAHPTSCSLS*HRHLAG Trigger: TCCCGCCAGATGTCTGTGGCAACTTAGACTACAGGA...GGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CCA 90 bp | GATGGAGACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAAAGCCATCGCGGTTCTaGTCCATGATAGTGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: DGDCFPTYDSPVLPPAHPKPSRF*SMIVKA Trigger: GGCCTTCACTATCATGGACCAGAACCGCGATGGCTT...TGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTCTCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196068.5 |
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| CDS-3UTR GCA 90 bp | CCCCCTGCCCACCCAACCCCATCTTGGCTGACTCCAGGTATGGAGGAGACACATAACACTTTGAAGGCGTaGAGTATAGTCTCTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PPAHPTPSWLTPGMEETHNTLKA*SIVSSG Trigger: CCCAGAAGAGACTATACTGCACGCCTTCAAAGTGTT...ATGTGTCTCCTCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTGGGCAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR GCA 90 bp | GTGATGGAGACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCATCTGGCGGGAAAGCTaGAAACATCTGCTTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: VMETVSLPMIALYCPLPTIWRES*KHLLDL Trigger: GAGGTCAAGCAGATGTTTGCAGCTTTCCCGCCAGAT...GGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTCTCCATCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CCA 90 bp | GTGATGGAGACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCGTTGCCACAGACATCTaGCGGGAAAGCTGCAAACAT | + |
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Preference number: 4 (lower is better) Translates to: VMETVSLPMIALYCPLPTVATDI*RESCKH Trigger: ATGTTTGCAGCTTTCCCGCCAGATGTCTGTGGCAAC...GGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTCTCCATCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR TCA 90 bp | GATGGAGACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCACCAATTCCTCGTTCTTaGCATTTATGCGACCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: DGDCFPTYDSPVLPPAHPPIPRS*HLCDPV Trigger: CACTGGGTCGCATAAATGTCAAGAACGAGGAATTGG...TGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTCTCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR GCA 90 bp | ATGGAGACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAAAACACTTTGAAGGCGTaGAGTATAGTCTCTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: METVSLPMIALYCPLPTQNTLKA*SIVSSG Trigger: CCCAGAAGAGACTATACTGCACGCCTTCAAAGTGTT...TTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTCTCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR GCA 90 bp | CACATCTCTGTGTTATTTATTCCCACTTCAGCTCCGGACTCCGGGGGTGATGGAATCTGGCGGGAAAGCTaGAAACATCTGCTTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: HISVLFIPTSAPDSGGDGIWRES*KHLLDL Trigger: GAGGTCAAGCAGATGTTTGCAGCTTTCCCGCCAGAT...TCCATCACCCCCGGAGTCCGGAGCTGAAGTGGGAATAAATAACACAGAGATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR GCA 90 bp | CACATCTCTGTGTTATTTATTCCCACTTCAGCTCCGGACTCCGGGGGTGATGGATCCTGTAGTCTAAGTTaGCACAGACATCTGGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: HISVLFIPTSAPDSGGDGSCSLS*HRHLAG Trigger: TCCCGCCAGATGTCTGTGGCAACTTAGACTACAGGA...TCCATCACCCCCGGAGTCCGGAGCTGAAGTGGGAATAAATAACACAGAGATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR TCA 90 bp | CACATCTCTGTGTTATTTATTCCCACTTCAGCTCCGGACTCCGGGGGTGATGGACCAATTCCTCGTTCTTaGCATTTATGCGACCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: HISVLFIPTSAPDSGGDGPIPRS*HLCDPV Trigger: CACTGGGTCGCATAAATGTCAAGAACGAGGAATTGG...TCCATCACCCCCGGAGTCCGGAGCTGAAGTGGGAATAAATAACACAGAGATGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | GACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAACCCCAAGGAAGACTGTGAAGTaGATGGGCCCCGGAGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: DCFPTYDSPVLPPAHPTPRKTVK*MGPGAS Trigger: GGAGGCTCCGGGGCCCATCAACTTCACAGTCTTCCT...TGGGGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | ATGGAGACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAAAGGAAGACTGTGAAGTaGATGGGCCCCGGAGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: METVSLPMIALYCPLPTQRKTVK*MGPGAS Trigger: GGAGGCTCCGGGGCCCATCAACTTCACAGTCTTCCT...TTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTCTCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | ACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAACCCCATTCTGGGTCCGTGCCCTaGAGTTTCTCCCCAAACATG | + |
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Preference number: 5 (lower is better) Translates to: TVSLPMIALYCPLPTQPHSGSVP*SFSPNM Trigger: CATGTTTGGGGAGAAACTCAAGGGCACGGACCCAGA...ATGGGGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | GGAGACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAACCGCTGCAAACATCTGCTaGACCTCCTCCTCACTGAAC | + |
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Preference number: 5 (lower is better) Translates to: GDCFPTYDSPVLPPAHPTAANIC*TSSSLN Trigger: GTTCAGTGAGGAGGAGGTCAAGCAGATGTTTGCAGC...GGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | ACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAACCCCATGCTGCAAACATCTGCTaGACCTCCTCCTCACTGAAC | + |
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Preference number: 5 (lower is better) Translates to: TVSLPMIALYCPLPTQPHAANIC*TSSSLN Trigger: GTTCAGTGAGGAGGAGGTCAAGCAGATGTTTGCAGC...ATGGGGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | TTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAACCCCATCTTGGTCCAATTCCTCGTTCTaGACATTTATGCGACCCAGT | + |
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Preference number: 5 (lower is better) Translates to: FPTYDSPVLPPAHPTPSWSNSSF*TFMRPS Trigger: ACTGGGTCGCATAAATGTCAAGAACGAGGAATTGGA...CCAAGATGGGGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | CACATCTCTGTGTTATTTATTCCCACTTCAGCTCCGGACTCCGGGGGTGATGGATCTGGGTCCGTGCCCTaGAGTTTCTCCCCAAACATG | + |
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Preference number: 5 (lower is better) Translates to: HISVLFIPTSAPDSGGDGSGSVP*SFSPNM Trigger: CATGTTTGGGGAGAAACTCAAGGGCACGGACCCAGA...TCCATCACCCCCGGAGTCCGGAGCTGAAGTGGGAATAAATAACACAGAGATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | GCCCCCTGCCCACCCAACCCCATCTTGGCTGACTCCAGGTATGGAGGAGACACATTAATGAAGTCAGCCTaGACAAAGCCTTTTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: APCPPNPILADSRYGGDTLMKSA*TKPFPS Trigger: TGAAGGAAAAGGCTTTGTCAAGGCTGACTTCATTAA...TGTGTCTCCTCCATACCTGGAGTCAGCCAAGATGGGGTTGGGTGGGCAGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | ATGGAGACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAATCCAATTCCTCGTTCTaGACATTTATGCGACCCAGT | + |
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Preference number: 5 (lower is better) Translates to: METVSLPMIALYCPLPTQSNSSF*TFMRPS Trigger: ACTGGGTCGCATAAATGTCAAGAACGAGGAATTGGA...TTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTCTCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | GGAGACTGTTTCCCTACCTATGATAGCCCTGTACTGCCCCCTGCCCACCCAACCTTAATGAAGTCAGCCTaGACAAAGCCTTTTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GDCFPTYDSPVLPPAHPTLMKSA*TKPFPS Trigger: TGAAGGAAAAGGCTTTGTCAAGGCTGACTTCATTAA...GGTTGGGTGGGCAGGGGGCAGTACAGGGCTATCATAGGTAGGGAAACAGTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | ACATCTCTGTGTTATTTATTCCCACTTCAGCTCCGGACTCCGGGGGTGATGGAGTCCAATTCCTCGTTCTaGACATTTATGCGACCCAGT | + |
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Preference number: 5 (lower is better) Translates to: TSLCYLFPLQLRTPGVMESNSSF*TFMRPS Trigger: ACTGGGTCGCATAAATGTCAAGAACGAGGAATTGGA...CTCCATCACCCCCGGAGTCCGGAGCTGAAGTGGGAATAAATAACACAGAGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS-3UTR CAA 90 bp | CACATCTCTGTGTTATTTATTCCCACTTCAGCTCCGGACTCCGGGGGTGATGGATTAATGAAGTCAGCCTaGACAAAGCCTTTTCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: HISVLFIPTSAPDSGGDGLMKSA*TKPFPS Trigger: TGAAGGAAAAGGCTTTGTCAAGGCTGACTTCATTAA...TCCATCACCCCCGGAGTCCGGAGCTGAAGTGGGAATAAATAACACAGAGATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS TCA 72 bp | GAGCCTCCTTCACCATGGCTTCCAATTCCTCGTTCTTaGCATTTATGCGACCCAGTGCAGCAAAGGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: EPPSPWLPIPRS*HLCDPVQQRCP Trigger: GGGACACCTTTGCTGCACTGGGTCGCATAAATGTCAAGAACGAGGAATTGGAAGCCATGGTGAAGGAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005611.10 ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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| CDS CAA 72 bp | GGAGCCTCCTTCACCATGGCTTCCAATTCCTCGTTCTaGACATTTATGCGACCCAGTGCAGCAAAGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: GASFTMASNSSF*TFMRPSAAKVS Trigger: GGACACCTTTGCTGCACTGGGTCGCATAAATGTCAAGAACGAGGAATTGGAAGCCATGGTGAAGGAGGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005611.10 ENSMUST00000196068.5 ENSMUST00000196436.5 ENSMUST00000197186.2 |
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