Pregenerated sensors for MYL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061816Ensembl transcript IDs: ENSMUST00000027151.12, ENSMUST00000119429.8, ENSMUST00000120415.8, ENSMUST00000160100.2, ENSMUST00000186202.7
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACGTGGTAAGCTGGTGTTaGCAGTTAGCCATAGGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: TVVCGLEIINCRHVCHENVVSWC*QLAIGV Trigger: AACACCTATGGCTAACTGTCAACACCAGCTTACCAC...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| 3UTR-3UTR TCA 90 bp | AGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGACTGTGGTAAGCTGGTGTTaGCAGTTAGCCATAGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SILRMLWTQVDDNGGVWTVVSWC*QLAIGV Trigger: AACACCTATGGCTAACTGTCAACACCAGCTTACCAC...AGTCCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| 3UTR-3UTR GCA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACGATTGTTTGATCTTCTaGATGGTGGTAAGCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: TVVCGLEIINCRHVCHENDCLIF*MVVSWC Trigger: ACACCAGCTTACCACCATGCAGAAGATCAAACAATC...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| 3UTR-3UTR GCA 90 bp | AGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGACTGATTGTTTGATCTTCTaGATGGTGGTAAGCTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SILRMLWTQVDDNGGVWTDCLIF*MVVSWC Trigger: ACACCAGCTTACCACCATGCAGAAGATCAAACAATC...AGTCCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| 3UTR-3UTR GCA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGGATTGTTTGATCTTCTaGATGGTGGTAAGCTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: CSILRMLWTQVDDNGGVWDCLIF*MVVSWC Trigger: ACACCAGCTTACCACCATGCAGAAGATCAAACAATC...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| 3UTR-3UTR CCA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACTCCTTCCATCTAGAATaGTCTAGATTGTTTGATCTT | + |
|
Preference number: 2 (lower is better) Translates to: TVVCGLEIINCRHVCHENSFHLE*SRLFDL Trigger: AAGATCAAACAATCTAGACCATTCTAGATGGAAGGA...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| 3UTR-3UTR CCA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGTCCTTCCATCTAGAATaGTCTAGATTGTTTGATCTT | + |
|
Preference number: 2 (lower is better) Translates to: CSILRMLWTQVDDNGGVWSFHLE*SRLFDL Trigger: AAGATCAAACAATCTAGACCATTCTAGATGGAAGGA...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| 3UTR-3UTR CAA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACGGTGGTAAGCTGGTGTaGACAGTTAGCCATAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TVVCGLEIINCRHVCHENGGKLV*TVSHRC Trigger: ACACCTATGGCTAACTGTCAACACCAGCTTACCACC...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| 3UTR-3UTR CAA 90 bp | AGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGACTGGTGGTAAGCTGGTGTaGACAGTTAGCCATAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SILRMLWTQVDDNGGVWTGGKLV*TVSHRC Trigger: ACACCTATGGCTAACTGTCAACACCAGCTTACCACC...AGTCCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| 3UTR-3UTR CAA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGGGTGGTAAGCTGGTGTaGACAGTTAGCCATAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CSILRMLWTQVDDNGGVWGGKLV*TVSHRC Trigger: ACACCTATGGCTAACTGTCAACACCAGCTTACCACC...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| CDS-3UTR CCA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGTTCCTTAGGTTTGGCTaGGGCAGGGGCCGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CSILRMLWTQVDDNGGVWFLRFG*GRGRGR Trigger: CCGGCCCCGGCCCCTGCCCCAGCCAAACCTAAGGAA...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027151.12 |
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| CDS-3UTR CCA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACCTGCATTGGTGGGATTaGTGCCCAGAGCCCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVVCGLEIINCRHVCHENLHWWD*CPEPGG Trigger: TCCTCCGGGCTCTGGGCACCAATCCCACCAATGCAG...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR GCA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGCATTGGTGGGATTGGTaGCCAGAGCCCGGAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: CSILRMLWTQVDDNGGVWHWWDW*PEPGGR Trigger: ACGTCCTCCGGGCTCTGGGCACCAATCCCACCAATG...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR CCA 90 bp | AGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGACTCTGCATTGGTGGGATTaGTGCCCAGAGCCCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SILRMLWTQVDDNGGVWTLHWWD*CPEPGG Trigger: TCCTCCGGGCTCTGGGCACCAATCCCACCAATGCAG...AGTCCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR CCA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACAGAGTGGCGAGGACATaGCGGAGTTCAGCACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TVVCGLEIINCRHVCHENRVART*RSSAPM Trigger: CATGGGTGCTGAACTCCGCCATGTCCTCGCCACTCT...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| CDS-3UTR CCA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGAGAGTGGCGAGGACATaGCGGAGTTCAGCACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CSILRMLWTQVDDNGGVWRVART*RSSAPM Trigger: CATGGGTGCTGAACTCCGCCATGTCCTCGCCACTCT...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| CDS-3UTR CCA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACTCTTCTCTCCCAGAGTaGCGAGGACATGGCGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TVVCGLEIINCRHVCHENSSLPE*RGHGGV Trigger: AACTCCGCCATGTCCTCGCCACTCTGGGAGAGAAGA...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| CDS-3UTR CCA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGCCATTGGAGTCCTCCTaGCCTGCCAGCAACGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSILRMLWTQVDDNGGVWPLESS*PASNAS Trigger: AGAAGCGTTGCTGGCAGGCCAGGAGGACTCCAATGG...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| CDS-3UTR CCA 90 bp | AGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGACTCCATTGGAGTCCTCCTaGCCTGCCAGCAACGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SILRMLWTQVDDNGGVWTPLESS*PASNAS Trigger: AGAAGCGTTGCTGGCAGGCCAGGAGGACTCCAATGG...AGTCCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
||
| CDS-3UTR TCA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACGGAGAAATGCCTCCTTaGAGTCCTCCTGTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVVCGLEIINCRHVCHENGEMPP*SPPVAP Trigger: AGGAGCAACAGGAGGACTTCAAGGAGGCATTTCTCC...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027151.12 |
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| CDS-3UTR CCA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGTCTTCTCTCCCAGAGTaGCGAGGACATGGCGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSILRMLWTQVDDNGGVWSSLPE*RGHGGV Trigger: AACTCCGCCATGTCCTCGCCACTCTGGGAGAGAAGA...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| CDS-3UTR TCA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACAGGACGTCTCCCACCTaGCTTAAGGTGATCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVVCGLEIINCRHVCHENRTSPT*LKVILH Trigger: ATGCAAGATCACCTTAAGTCAGGTGGGAGACGTCCT...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR TCA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACTCCCAAGAACCTTCTTaGCCTCTGCATTGGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TVVCGLEIINCRHVCHENSQEPS*PLHWWD Trigger: ATCCCACCAATGCAGAGGTCAAGAAGGTTCTTGGGA...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR GCA 90 bp | GTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATATGCATTGGTGGGATTGGTaGCCAGAGCCCGGAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: VLRQHLRLRQFIYNKSYMHWWDW*PEPGGR Trigger: ACGTCCTCCGGGCTCTGGGCACCAATCCCACCAATG...CATATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATATGCTGCATTGGTGGGATTaGTGCCCAGAGCCCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VLRQHLRLRQFIYNKSYMLHWWD*CPEPGG Trigger: TCCTCCGGGCTCTGGGCACCAATCCCACCAATGCAG...CATATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR CCA 90 bp | TGGGTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATAGAGTGGCGAGGACATaGCGGAGTTCAGCACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: WVLRQHLRLRQFIYNKSYRVART*RSSAPM Trigger: CATGGGTGCTGAACTCCGCCATGTCCTCGCCACTCT...ATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR TCA 90 bp | AGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGACTAGGACGTCTCCCACCTaGCTTAAGGTGATCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SILRMLWTQVDDNGGVWTRTSPT*LKVILH Trigger: ATGCAAGATCACCTTAAGTCAGGTGGGAGACGTCCT...AGTCCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR GCA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGAACCTTCTTGACCTCTaGATTGGTGGGATTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSILRMLWTQVDDNGGVWNLLDL*IGGIGA Trigger: GGCACCAATCCCACCAATGCAGAGGTCAAGAAGGTT...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR GCA 90 bp | AGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGACTAACCTTCTTGACCTCTaGATTGGTGGGATTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SILRMLWTQVDDNGGVWTNLLDL*IGGIGA Trigger: GGCACCAATCCCACCAATGCAGAGGTCAAGAAGGTT...AGTCCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR CCA 90 bp | TGGGTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATTCTTCTCTCCCAGAGTaGCGAGGACATGGCGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WVLRQHLRLRQFIYNKSYSSLPE*RGHGGV Trigger: AACTCCGCCATGTCCTCGCCACTCTGGGAGAGAAGA...ATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATATGCCATTGGAGTCCTCCTaGCCTGCCAGCAACGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLRQHLRLRQFIYNKSYMPLESS*PASNAS Trigger: AGAAGCGTTGCTGGCAGGCCAGGAGGACTCCAATGG...CATATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR GCA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACCATTCATCTCTTCATTaGTGGGGTTCCCAAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: TVVCGLEIINCRHVCHENHSSLH*WGSQEP Trigger: AGGTTCTTGGGAACCCCAGCAATGAAGAGATGAATG...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR GCA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACGTCAAACAGGAGAAATaGCTCCTTGAAGTCGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVVCGLEIINCRHVCHENVKQEK*LLEVGN Trigger: ATTGCCGACTTCAAGGAGGCATTTCTCCTGTTTGAC...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119429.8 |
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| CDS-3UTR TCA 90 bp | TGGGTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATCTCTCCTTAATGAGGTaGGGCTGGCTGTACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WVLRQHLRLRQFIYNKSYLSLMR*GWLYLH Trigger: ATGAAGGTACAGCCAGCCTCACCTCATTAAGGAGAG...ATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR GCA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGTTGAAGTCCTCCTGTTaGTCCTTAGAGAACTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: CSILRMLWTQVDDNGGVWLKSSC*SLENSI Trigger: GATCGAGTTCTCTAAGGAGCAACAGGAGGACTTCAA...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027151.12 |
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| CDS-3UTR GCA 90 bp | AGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGACTCATTCATCTCTTCATTaGTGGGGTTCCCAAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SILRMLWTQVDDNGGVWTHSSLH*WGSQEP Trigger: AGGTTCTTGGGAACCCCAGCAATGAAGAGATGAATG...AGTCCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR CCA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGTCATCTCTTCATTGCTaGGGTTCCCAAGAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSILRMLWTQVDDNGGVWSSLHC*GSQEPS Trigger: AGAAGGTTCTTGGGAACCCCAGCAATGAAGAGATGA...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| 3UTR CAA 72 bp | AAATTCAGGGAATCCTTCCATCTAGAATGGTCTAGATaGTTTGATCTTCTGCATGGTGGTAAGCTGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KFRESFHLEWSR*FDLLHGGKLVL Trigger: CAACACCAGCTTACCACCATGCAGAAGATCAAACAATCTAGACCATTCTAGATGGAAGGATTCCCTGAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| CDS-3UTR TCA 90 bp | GTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATATGAGGACGTCTCCCACCTaGCTTAAGGTGATCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLRQHLRLRQFIYNKSYMRTSPT*LKVILH Trigger: ATGCAAGATCACCTTAAGTCAGGTGGGAGACGTCCT...CATATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR GCA 90 bp | TGGGTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATCATTCATCTCTTCATTaGTGGGGTTCCCAAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: WVLRQHLRLRQFIYNKSYHSSLH*WGSQEP Trigger: AGGTTCTTGGGAACCCCAGCAATGAAGAGATGAATG...ATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR GCA 90 bp | TGGGTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATGTCAAACAGGAGAAATaGCTCCTTGAAGTCGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WVLRQHLRLRQFIYNKSYVKQEK*LLEVGN Trigger: ATTGCCGACTTCAAGGAGGCATTTCTCCTGTTTGAC...ATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS GCA 90 bp | ATTCATCTCTTCATTGCTGGGGTTCCCAAGAACCTTCTTGACCTCTaGATTGGTGGGATTGGTGCCCAGAGCCCGGAGGACGTCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IHLFIAGVPKNLLDL*IGGIGAQSPEDVSH Trigger: GTGGGAGACGTCCTCCGGGCTCTGGGCACCAATCCCACCAATGCAGAGGTCAAGAAGGTTCTTGGGAACCCCAGCAATGAAGAGATGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000120415.8 ENSMUST00000160100.2 |
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| CDS TCA 90 bp | GATTGGTGCCCAGAGCCCGGAGGACGTCTCCCACCTGACTTAAGGTaGTCTTGCATTCACCTGTTCTGTCAAACAGGAGAAATGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DWCPEPGGRLPPDLR*SCIHLFCQTGEMPP Trigger: AGGAGGCATTTCTCCTGTTTGACAGAACAGGTGAATGCAAGATCACCTTAAGTCAGGTGGGAGACGTCCTCCGGGCTCTGGGCACCAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000120415.8 ENSMUST00000160100.2 |
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| CDS-3UTR CAA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACTCTGCATTGGTGGGATaGGTGCCCAGAGCCCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: TVVCGLEIINCRHVCHENSALVG*VPRARR Trigger: CCTCCGGGCTCTGGGCACCAATCCCACCAATGCAGA...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR CAA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGTCTGCATTGGTGGGATaGGTGCCCAGAGCCCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: CSILRMLWTQVDDNGGVWSALVG*VPRARR Trigger: CCTCCGGGCTCTGGGCACCAATCCCACCAATGCAGA...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR CAA 90 bp | TGGGTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATTCTGCATTGGTGGGATaGGTGCCCAGAGCCCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: WVLRQHLRLRQFIYNKSYSALVG*VPRARR Trigger: CCTCCGGGCTCTGGGCACCAATCCCACCAATGCAGA...ATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR CAA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACTTCTTGACCTCTGCATaGGTGGGATTGGTGCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: TVVCGLEIINCRHVCHENFLTSA*VGLVPR Trigger: TCTGGGCACCAATCCCACCAATGCAGAGGTCAAGAA...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR CAA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACCCTCCCTGGTCCTTGTaGTTGGAGATAGCTTGCATC | + |
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Preference number: 5 (lower is better) Translates to: TVVCGLEIINCRHVCHENPPWSL*LEIACI Trigger: GATGCAAGCTATCTCCAACAACAAGGACCAGGGAGG...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| CDS-3UTR CAA 90 bp | AGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGACTCCTCCCTGGTCCTTGTaGTTGGAGATAGCTTGCATC | + |
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Preference number: 5 (lower is better) Translates to: SILRMLWTQVDDNGGVWTPPWSL*LEIACI Trigger: GATGCAAGCTATCTCCAACAACAAGGACCAGGGAGG...AGTCCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| CDS-3UTR CAA 90 bp | ACGGTGGTGTGTGGACTTGAGATTATCAACTGTAGGCATGTTTGTCATGAAAACAGGAGAAATGCCTCCTaGAAGTCGGCAATCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: TVVCGLEIINCRHVCHENRRNAS*KSAIWS Trigger: TGACCAGATTGCCGACTTCAAGGAGGCATTTCTCCT...GTTTTCATGACAAACATGCCTACAGTTGATAATCTCAAGTCCACACACCACCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119429.8 |
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| CDS-3UTR CAA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGTTCCCAAGAACCTTCTaGACCTCTGCATTGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: CSILRMLWTQVDDNGGVWFPRTF*TSALVG Trigger: TCCCACCAATGCAGAGGTCAAGAAGGTTCTTGGGAA...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR CAA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGGCATTCATCTCTTCATaGCTGGGGTTCCCAAGAACC | + |
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Preference number: 5 (lower is better) Translates to: CSILRMLWTQVDDNGGVWAFISS*LGFPRT Trigger: GGTTCTTGGGAACCCCAGCAATGAAGAGATGAATGC...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 |
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| CDS-3UTR CAA 90 bp | AGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGACTCCCTGGTCCTTGTTGTaGGAGATAGCTTGCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: SILRMLWTQVDDNGGVWTPWSLL*EIACIM Trigger: CATGATGCAAGCTATCTCCAACAACAAGGACCAGGG...AGTCCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| CDS-3UTR CAA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGCCCTGGTCCTTGTTGTaGGAGATAGCTTGCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: CSILRMLWTQVDDNGGVWPWSLL*EIACIM Trigger: CATGATGCAAGCTATCTCCAACAACAAGGACCAGGG...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000186202.7 |
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| CDS-3UTR CAA 90 bp | TGTAGTATTTTAAGAATGTTGTGGACCCAAGTAGATGATAACGGTGGTGTGTGGCTTGAAGTCCTCCTGTaGCTCCTTAGAGAACTCGAT | + |
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Preference number: 5 (lower is better) Translates to: CSILRMLWTQVDDNGGVWLEVLL*LLRELD Trigger: ATCGAGTTCTCTAAGGAGCAACAGGAGGACTTCAAG...CCACACACCACCGTTATCATCTACTTGGGTCCACAACATTCTTAAAATACTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027151.12 |
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| CDS-3UTR CAA 90 bp | TGGGTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATCCTCCCTGGTCCTTGTaGTTGGAGATAGCTTGCATC | + |
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Preference number: 5 (lower is better) Translates to: WVLRQHLRLRQFIYNKSYPPWSL*LEIACI Trigger: GATGCAAGCTATCTCCAACAACAAGGACCAGGGAGG...ATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR CAA 90 bp | TGGGTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATGCATTCATCTCTTCATaGCTGGGGTTCCCAAGAACC | + |
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Preference number: 5 (lower is better) Translates to: WVLRQHLRLRQFIYNKSYAFISS*LGFPRT Trigger: GGTTCTTGGGAACCCCAGCAATGAAGAGATGAATGC...ATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATATGTTCCCAAGAACCTTCTaGACCTCTGCATTGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VLRQHLRLRQFIYNKSYMFPRTF*TSALVG Trigger: TCCCACCAATGCAGAGGTCAAGAAGGTTCTTGGGAA...CATATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATATGCCCTGGTCCTTGTTGTaGGAGATAGCTTGCATCATG | + |
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Preference number: 5 (lower is better) Translates to: VLRQHLRLRQFIYNKSYMPWSLL*EIACIM Trigger: CATGATGCAAGCTATCTCCAACAACAAGGACCAGGG...CATATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGGCAGCATCTCAGATTGAGGCAATTTATTTATAATAAGTCATATATGAGGAGAAATGCCTCCTaGAAGTCGGCAATCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: VLRQHLRLRQFIYNKSYMRRNAS*KSAIWS Trigger: TGACCAGATTGCCGACTTCAAGGAGGCATTTCTCCT...CATATATGACTTATTATAAATAAATTGCCTCAATCTGAGATGCTGCCTGAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120415.8 |
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| CDS CAA 72 bp | TTGCTGGGGTTCCCAAGAACCTTCTTGACCTCTGCATaGGTGGGATTGGTGCCCAGAGCCCGGAGGACGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLGFPRTFLTSA*VGLVPRARRTS Trigger: AGACGTCCTCCGGGCTCTGGGCACCAATCCCACCAATGCAGAGGTCAAGAAGGTTCTTGGGAACCCCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000120415.8 ENSMUST00000160100.2 |
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| CDS GCA 72 bp | TTCATTGCTGGGGTTCCCAAGAACCTTCTTGACCTCTaGATTGGTGGGATTGGTGCCCAGAGCCCGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: FIAGVPKNLLDL*IGGIGAQSPED Trigger: GTCCTCCGGGCTCTGGGCACCAATCCCACCAATGCAGAGGTCAAGAAGGTTCTTGGGAACCCCAGCAATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000120415.8 ENSMUST00000160100.2 |
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| CDS TCA 72 bp | GGATTGGTGCCCAGAGCCCGGAGGACGTCTCCCACCTaGCTTAAGGTGATCTTGCATTCACCTGTTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GLVPRARRTSPT*LKVILHSPVLS Trigger: TGACAGAACAGGTGAATGCAAGATCACCTTAAGTCAGGTGGGAGACGTCCTCCGGGCTCTGGGCACCAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000120415.8 ENSMUST00000160100.2 |
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| CDS TCA 72 bp | CCAGAGCCCGGAGGACGTCTCCCACCTGACTTAAGGTaGTCTTGCATTCACCTGTTCTGTCAAACAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: PEPGGRLPPDLR*SCIHLFCQTGE Trigger: TTCTCCTGTTTGACAGAACAGGTGAATGCAAGATCACCTTAAGTCAGGTGGGAGACGTCCTCCGGGCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027151.12 ENSMUST00000119429.8 ENSMUST00000120415.8 ENSMUST00000160100.2 |
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| CDS GCA 72 bp | GATCTTGCATTCACCTGTTCTGTCAAACAGGAGAAATaGCTCCTTGAAGTCGGCAATCTGGTCAGCACTGAA | + |
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Preference number: 6 (lower is better) Translates to: DLAFTCSVKQEK*LLEVGNLVSTE Trigger: TTCAGTGCTGACCAGATTGCCGACTTCAAGGAGGCATTTCTCCTGTTTGACAGAACAGGTGAATGCAAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119429.8 ENSMUST00000120415.8 |
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