Pregenerated sensors for MYH8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055775Ensembl transcript IDs: ENSMUST00000019625.12, ENSMUST00000108685.9
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGCCAATATTGGGATAACACTAAGCAGATCGATGCCATGGTTCTaGACAGATTTGTATGAAAAGTGTGATTGGGAGCCCAGGCGACTT | + |
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Preference number: 1 (lower is better) Translates to: SANIGITLSRSMPWF*TDLYEKCDWEPRRL Trigger: AAGTCGCCTGGGCTCCCAATCACACTTTTCATACAAATCTGTTCAGAACCATGGCATCGATCTGCTTAGTGTTATCCCAATATTGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR TCA 90 bp | GTGCCCAGGTACCAAAACTCCACAGAAGAAAGGGAACATGGGAACTaGGAACATATCCAGAGGCATTTATATGTGAAGATAAAAGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: VPRYQNSTEEREHGN*EHIQRHLYVKIKGF Trigger: AAAACCTTTTATCTTCACATATAAATGCCTCTGGATATGTTCTCAGTTCCCATGTTCCCTTTCTTCTGTGGAGTTTTGGTACCTGGGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR CCA 90 bp | AAGAAATGTGCCCAGGTACCAAAACTCCACAGAAGAAAGGGAACATaGGAACTGAGAACATATCCAGAGGCATTTATATGTGAAGATAAA | + |
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Preference number: 1 (lower is better) Translates to: KKCAQVPKLHRRKGT*ELRTYPEAFICEDK Trigger: TTTATCTTCACATATAAATGCCTCTGGATATGTTCTCAGTTCCCATGTTCCCTTTCTTCTGTGGAGTTTTGGTACCTGGGCACATTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR CCA 90 bp | CACCTGCCCTACAGAGTAATAGTCATTAATACTTGGCCAATTTCATaGCATTACTATGCTATTCCAACCTCTCTGGGTTATTTTGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: HLPYRVIVINTWPIS*HYYAIPTSLGYFEE Trigger: TTCTTCAAAATAACCCAGAGAGGTTGGAATAGCATAGTAATGCCATGAAATTGGCCAAGTATTAATGACTATTACTCTGTAGGGCAGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR TCA 90 bp | GAACATTTAAATGCACGTAAGAGCAGAGACTATGATAATGAGACTTTGGGCACCGGCACAGAGTCCTTGTaGAAGTCCAGGCCAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: EHLNARKSRDYDNETLGTGTESL*KSRPVC Trigger: ACAGACTGGCCTGGACTTTCACAAGGACTCTGTGCC...GGTGCCCAAAGTCTCATTATCATAGTCTCTGCTCTTACGTGCATTTAAATGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR TCA 90 bp | GTAAGAGCAGAGACTATGATAATGAGACTTTGGGCACCTGCCCTACAGAGTAATAGGGAACATGGGAACTaGGAACATATCCAGAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: VRAETMIMRLWAPALQSNREHGN*EHIQRH Trigger: ATGCCTCTGGATATGTTCTCAGTTCCCATGTTCCCT...ATTACTCTGTAGGGCAGGTGCCCAAAGTCTCATTATCATAGTCTCTGCTCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR CCA 90 bp | AACCTTGAGCTTCTGTTCAAGGAAATGGGTATGGATTTTGGATGTATGAGATTGGTCATTCGGTGGCGGTaGATATGGCAGTTTCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: NLELLFKEMGMDFGCMRLVIRWR*IWQFLD Trigger: ATCCAGAAACTGCCATATCCACCGCCACCGAATGAC...CAATCTCATACATCCAAAATCCATACCCATTTCCTTGAACAGAAGCTCAAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTTTATCCATGCTCTATCTCCAGCTTACTCTTGCTCTGTCTCCAAAGCTGTCTGTTTTCAGAAACTaGCTCTTTGCTTTATCTGAG | + |
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Preference number: 2 (lower is better) Translates to: FSLSMLYLQLTLALSPKLSVFRN*LFALSE Trigger: CTCAGATAAAGCAAAGAGCCAGTTTCTGAAAACAGA...CAGCTTTGGAGACAGAGCAAGAGTAAGCTGGAGATAGAGCATGGATAAAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR TCA 90 bp | ATACTTGGCCAATTTCATGGCATTACTATGCTATTCCAACCTCTCTGGGTTATTTCGATGCCATGGTTCTaGACAGATTTGTATGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: ILGQFHGITMLFQPLWVISMPWF*TDLYEK Trigger: CTTTTCATACAAATCTGTTCAGAACCATGGCATCGA...AATAACCCAGAGAGGTTGGAATAGCATAGTAATGCCATGAAATTGGCCAAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTACAGAGTAATAGTCATTAATACTTGGCCAATTTCATGGCATTACTATGCTCTCTCTGGGTTATTTTaGAGAAAACCTCAGACATCA | + |
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Preference number: 2 (lower is better) Translates to: PYRVIVINTWPISWHYYALSGLF*RKPQTS Trigger: TGATGTCTGAGGTTTTCTTCAAAATAACCCAGAGAG...AGCATAGTAATGCCATGAAATTGGCCAAGTATTAATGACTATTACTCTGTAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGATTTTAGTTATAAGGAGTAACAGTTGCAGGATTATGAAGTCATTAGAGGAATTCAGAGTTCTCTaGATATGCCTGAGACCTCTT | + |
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Preference number: 2 (lower is better) Translates to: QVILVIRSNSCRIMKSLEEFRVL*ICLRPL Trigger: AAGAGGTCTCAGGCATATCCAGAGAACTCTGAATTC...CTCTAATGACTTCATAATCCTGCAACTGTTACTCCTTATAACTAAAATCACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTACAGAGTAATAGTCATTAATACTTGGCCAATTTCATGGCATTACTATGCTTTCATGTCACTAATTTaGCTACTGGTGATGCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: PYRVIVINTWPISWHYYAFMSLI*LLVMPN Trigger: ATTTGGCATCACCAGTAGTCAAATTAGTGACATGAA...AGCATAGTAATGCCATGAAATTGGCCAAGTATTAATGACTATTACTCTGTAGGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR GCA 72 bp | GTTCTCTTTATCCATGCTCTATCTCCAGCTTACTCTTaGTCTGTCTCCAAAGCTGGCATCATCGGCTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: VLFIHALSPAYS*SVSKAGIIGCV Trigger: GACACAGCCGATGATGCCAGCTTTGGAGACAGAGCAAGAGTAAGCTGGAGATAGAGCATGGATAAAGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR CAA 90 bp | GTAAGAGCAGAGACTATGATAATGAGACTTTGGGCACCTGCCCTACAGAGTAATCCTCTCTGGGTTATTTaGAAGAAAACCTCAGACATC | + |
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Preference number: 3 (lower is better) Translates to: VRAETMIMRLWAPALQSNPLWVI*KKTSDI Trigger: GATGTCTGAGGTTTTCTTCAAAATAACCCAGAGAGG...ATTACTCTGTAGGGCAGGTGCCCAAAGTCTCATTATCATAGTCTCTGCTCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR TCA 72 bp | ATTGGGATAACACTAAGCAGATCGATGCCATGGTTCTaGACAGATTTGTATGAAAAGTGTGATTGGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: IGITLSRSMPWF*TDLYEKCDWEP Trigger: GGGCTCCCAATCACACTTTTCATACAAATCTGTTCAGAACCATGGCATCGATCTGCTTAGTGTTATCCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR CCA 72 bp | GGGCACCTGCCCTACAGAGTAATAGTCATTAATACTTaGCCAATTTCATGGCATTACTATGCTATTCCAACC | + |
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Preference number: 3 (lower is better) Translates to: GHLPYRVIVINT*PISWHYYAIPT Trigger: GGTTGGAATAGCATAGTAATGCCATGAAATTGGCCAAGTATTAATGACTATTACTCTGTAGGGCAGGTGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR CAA 90 bp | GTAAGAGCAGAGACTATGATAATGAGACTTTGGGCACCTGCCCTACAGAGTAATCATCGGCTGTGTCATTaGAAAATCCACATAAGAATT | + |
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Preference number: 3 (lower is better) Translates to: VRAETMIMRLWAPALQSNHRLCH*KIHIRI Trigger: AATTCTTATGTGGATTTTCAAATGACACAGCCGATG...ATTACTCTGTAGGGCAGGTGCCCAAAGTCTCATTATCATAGTCTCTGCTCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR CAA 90 bp | GTGAAGCTAAGACTTAGAAGAGAAAATGGCTTCTTAAATGTGAGTTACAGAACTATCTCCAGCTTACTCTaGCTCTGTCTCCAAAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VKLRLRRENGFLNVSYRTISSLL*LCLQSW Trigger: CCAGCTTTGGAGACAGAGCAAGAGTAAGCTGGAGAT...AGTTCTGTAACTCACATTTAAGAAGCCATTTTCTCTTCTAAGTCTTAGCTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR TCA 72 bp | TACCAAAACTCCACAGAAGAAAGGGAACATGGGAACTaGGAACATATCCAGAGGCATTTATATGTGAAGATA | + |
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Preference number: 3 (lower is better) Translates to: YQNSTEEREHGN*EHIQRHLYVKI Trigger: TATCTTCACATATAAATGCCTCTGGATATGTTCTCAGTTCCCATGTTCCCTTTCTTCTGTGGAGTTTTGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR-3UTR CAA 90 bp | CCCTACAGAGTAATAGTCATTAATACTTGGCCAATTTCATGGCATTACTATGCTTCATGTACAACTGTATaGCATCTAGGAGAACAGACA | + |
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Preference number: 3 (lower is better) Translates to: PYRVIVINTWPISWHYYASCTTV*HLGEQT Trigger: TGTCTGTTCTCCTAGATGCAATACAGTTGTACATGA...AGCATAGTAATGCCATGAAATTGGCCAAGTATTAATGACTATTACTCTGTAGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR TCA 72 bp | TTCTTGTTCTCTGTCCAGTTTTTCATGTCACTAATTTaGCTACTGGTGATGCCAAATAAGAAGTGGCCTAAT | + |
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Preference number: 3 (lower is better) Translates to: FLFSVQFFMSLI*LLVMPNKKWPN Trigger: ATTAGGCCACTTCTTATTTGGCATCACCAGTAGTCAAATTAGTGACATGAAAAACTGGACAGAGAACAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| 3UTR CCA 72 bp | TACAGAGTAATAGTCATTAATACTTGGCCAATTTCATaGCATTACTATGCTATTCCAACCTCTCTGGGTTAT | + |
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Preference number: 3 (lower is better) Translates to: YRVIVINTWPIS*HYYAIPTSLGY Trigger: ATAACCCAGAGAGGTTGGAATAGCATAGTAATGCCATGAAATTGGCCAAGTATTAATGACTATTACTCTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| CDS-3UTR CCA 90 bp | GCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCCCGGCGCAGGCCGCGTTaGTCCTCTCCACATCAATCA | + |
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Preference number: 4 (lower is better) Translates to: ASDPASDPKQPLLCFPSARRRPR*SSPHQS Trigger: TGATTGATGTGGAGAGGACCAACGCGGCCTGCGCCG...GGCTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR GCA 90 bp | AGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCCCCTTGGCAGCCCCTGGTCCTCCAGAGTaGGGCACATCTTCTCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SKRPKAAPPVLSFSPLAAPGPPE*GTSSPD Trigger: ATCTGGAGAAGATGTGCCGCACTCTGGAGGACCAGG...GGCTGCCAAGGGGCTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR GCA 90 bp | AGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGGCTCGTGCTGCAGCTTaGGGAACTTGGCCAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RQVTQQATQSSPSCAFLQARAAA*GTWPGW Trigger: CCAACCTGGCCAAGTTCCGCAAGCTGCAGCACGAGC...CTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CCA 90 bp | AAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTCTCATAGACAGCCTTaGCCAGGGCACCCACCGCAT | + |
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Preference number: 4 (lower is better) Translates to: KPREASDPASDPKQPLLCSHRQP*PGHPPH Trigger: ATGCGGTGGGTGCCCTGGCCAAGGCTGTCTATGAGA...GCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR GCA 90 bp | CCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCCCCTTGGCAGGGGTCCCCTGCATTTTaGCAGACTCCTCCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PASDPKQPLLCFPSAPWQGSPAF*QTPPSS Trigger: AGAAGAAGGAGGAGTCTGGCAAAATGCAGGGGACCC...CTGCCAAGGGGCTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR GCA 90 bp | AACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTCTGGAGTACTCACCTaGTTCTGTCTGCAGGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: NPERQVTQQATQSSPSCASGVLT*FCLQAC Trigger: GCACGCCTGCAGACAGAAGCAGGTGAGTACTCCAGA...AGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR TCA 90 bp | GAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCGCAGCTGGGTGTCCTTaGGGATGCCCTGTGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: EKSKPREASDPASDPKQPAAGCP*GCPVCS Trigger: GGAACACACAGGGCATCCTCAAGGACACCCAGCTGC...GGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR GCA 90 bp | AAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGCAGGCGTGCTCTCTaGGCTGTCAGCTCGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: KVNPERQVTQQATQSSPSCRRAL*AVSSLM Trigger: CATCAACGAGCTGACAGCGCAGAGAGCACGCCTGCA...GGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR GCA 90 bp | AAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCGCGTGGATGCCTGCTTaGTCCTTGACAACTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KPREASDPASDPKQPLLCAWMPA*SLTTER Trigger: TCTCTCAGTTGTCAAGGAGCAAGCAGGCATCCACGC...GCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTTCAGATCCTCCTaGCCCCGGAGAGCGTCATCC | + |
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Preference number: 4 (lower is better) Translates to: RKVNPERQVTQQATQSSPSFRSS*PRRASS Trigger: GGATGACGCTCTCCGGGGCCAGGAGGATCTGAAGGA...GGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR GCA 90 bp | AGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGATCTTTCCCTCCTCGTaGTCCAGAGATGCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RQVTQQATQSSPSCAFLQIFPSS*SRDASA Trigger: AGCAGAGGCATCTCTGGAGCACGAGGAGGGAAAGAT...CTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CCA 90 bp | CCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCGATTTCCCTTGGCTTTaGCGATGGCCTCTGCATTAC | + |
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Preference number: 4 (lower is better) Translates to: PERQVTQQATQSSPSCAFDFPWL*RWPLHY Trigger: GTAATGCAGAGGCCATCGCCAAAGCCAAGGGAAATC...GAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CCA 90 bp | AGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGTCTCCAGATTTCCCTTaGCTTTGGCGATGGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RQVTQQATQSSPSCAFLQSPDFP*LWRWPL Trigger: CAGAGGCCATCGCCAAAGCCAAGGGAAATCTGGAGA...CTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCGGGCCAGCGCGTTCTTaGCCTTGGTTTCTTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: RKVNPERQVTQQATQSSPGPARS*PWFLPR Trigger: TCGAGGAAGAAACCAAGGCCAAGAACGCGCTGGCCC...GGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CCA 90 bp | GAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCGTTCGGGACTCCTTCTaGCAGGACTCAAGCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: EKSKPREASDPASDPKQPVRDSF*QDSSSA Trigger: GGCTGAGCTTGAGTCCTGCCAGAAGGAGTCCCGAAC...GGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CCA 90 bp | GTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCTCGTGTTCTGGGTGTaGAGGAGCTGCACGCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VSSRRKVNPERQVTQQATLVFWV*RSCTRS Trigger: TGAGCGCGTGCAGCTCCTCCACACCCAGAACACGAG...GGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCATGAGGCTCGTGTTCTaGGTGTGGAGGAGCTGCACG | + |
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Preference number: 4 (lower is better) Translates to: RKVNPERQVTQQATQSSPMRLVF*VWRSCT Trigger: CGTGCAGCTCCTCCACACCCAGAACACGAGCCTCAT...GGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CCA 90 bp | AAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCCAAGTTCACGTACCCTaGCCTCCAGTTTCTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: KPREASDPASDPKQPLLCQVHVP*PPVSGS Trigger: AGATCCAGAAACTGGAGGCCAGGGTACGTGAACTTG...GCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR TCA 90 bp | GCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCCATACACCGTACGAAGTaGGGGTGTGTACTTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: ASDPASDPKQPLLCFPSAIHRTK*GCVLLR Trigger: TCTGAGAAGTACACACCCTCACTTCGTACGGTGTAT...GGCTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR TCA 90 bp | AGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGCTGTCTGCTTCAGATTaGACCTGGAGTTGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SKPREASDPASDPKQPLLLSASD*TWSCRS Trigger: TGACCTGCAACTCCAGGTTCAATCTGAAGCAGACAG...CAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR TCA 90 bp | CCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCCCCTTGGCAGCTCTTCTGCATTGCGTaGCTCTTGAATCACTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PASDPKQPLLCFPSAPWQLFCIA*LLNHFF Trigger: GAAGAAGTGATTCAAGAGTCACGCAATGCAGAAGAG...CTGCCAAGGGGCTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR GCA 90 bp | AAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCAGCTCCTCAATCTGCTaGGTGGATGCCTGCTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KSKPREASDPASDPKQPLSSSIC*VDACLL Trigger: GAGCAAGCAGGCATCCACGCAGCAGATTGAGGAGCT...GAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR GCA 90 bp | GTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCTCCACGATGGCCAGCTaGTCCTTCAGATCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VSSRRKVNPERQVTQQATSTMAS*SFRSSW Trigger: CCAGGAGGATCTGAAGGAGCAGCTGGCCATCGTGGA...GGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR GCA 90 bp | GTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCGCGTCCAGCAGCTCCTaGTCTGCAATCTTCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VSSRRKVNPERQVTQQATASSSS*SAIFLL Trigger: GAGCAGGAAGATTGCAGAGCAGGAGCTGCTGGACGC...GGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR TCA 90 bp | AGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGTTCATGGGGAAGACTTaGTCTTCCTTGACGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQVTQQATQSSPSCAFLQFMGKT*SSLTVR Trigger: TCTCACCGTCAAGGAAGATCAAGTCTTCCCCATGAA...CTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR TCA 90 bp | AGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGGACACAGAAGAGGCCTaGGTAGGTATAGATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKPREASDPASDPKQPLLDTEEA*VGIDHP Trigger: TGGATGATCTATACCTACTCAGGCCTCTTCTGTGTC...CAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR TCA 90 bp | AGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCTCAGCAGCATCTTCTaGTACTCCACTCTCATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQVTQQATQSSPSCAFLQLSSIF*YSTLIR Trigger: CCTAATGAGAGTGGAGTATCAGAAGATGCTGCTGAG...CTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR TCA 90 bp | AAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCTCCCGGCGAAGTTTCTaGAACTCAGTTTCCCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSKPREASDPASDPKQPLSRRSF*NSVSRF Trigger: GAAGCGGGAAACTGAGTTTCAGAAACTTCGCCGGGA...GAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR TCA 90 bp | AACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTGCATTGCGTGACTCTTaGATCACTTCTTCCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPERQVTQQATQSSPSCAALRDS*ITSSTS Trigger: TGAAGTGGAAGAAGTGATTCAAGAGTCACGCAATGC...AGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR GCA 90 bp | GTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCTTGATGAGCCGCTGCTaGTCCTCCTCCTTGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSRRKVNPERQVTQQATLMSRC*SSSLLF Trigger: GAAGAGCAAGGAGGAGGAGCAGCAGCGGCTCATCAA...GGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTTCAGCTCCTCAATCTaGTGCGTGGATGCCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKVNPERQVTQQATQSSPFSSSI*CVDACL Trigger: CAAGCAGGCATCCACGCAGCAGATTGAGGAGCTGAA...GGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR GCA 90 bp | CCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCCCCTTGGCAGCCTTCTCTTCTGCATTaGGTGACTCTTGAATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PASDPKQPLLCFPSAPWQPSLLH*VTLESL Trigger: AAGTGATTCAAGAGTCACGCAATGCAGAAGAGAAGG...CTGCCAAGGGGCTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCCCAGGAGACCAGCTTTaGAGAAAACCTTGGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKVNPERQVTQQATQSSPPGDQL*RKPWCV Trigger: GACACACCAAGGTTTTCTTCAAAGCTGGTCTCCTGG...GGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR TCA 90 bp | AAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTCACTCTGCAGCTGTaGAACATCATTTTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPREASDPASDPKQPLLCFTLQL*NIIFQL Trigger: AAGCTGGAAAATGATGTTTCACAGCTGCAGAGTGAA...GCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR GCA 90 bp | AGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGAGCGTCATCCAGATaGAGCTGGGTGTCCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRRKVNPERQVTQQATQRASSR*SWVSLR Trigger: CCTCAAGGACACCCAGCTGCATCTGGATGACGCTCT...TTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CCA 90 bp | AGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGATGTGGAAAAGAGGCTaGCCAGAGTTTTCATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPREASDPASDPKQPLLMWKRG*PEFSLL Trigger: CAGCAATGAAAACTCTGGCCAGCCTCTTTTCCACAT...CAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CCA 90 bp | AAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCCCCTACAGACCGCCTaGGTTCTTGTTATAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSKPREASDPASDPKQPLPLQTA*VLVIIW Trigger: CCAGATTATAACAAGAACCCAGGCGGTCTGTAGGGG...GAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CCA 90 bp | AGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCCCTCAATCTGCTGCGTaGATGCCTGCTTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRRKVNPERQVTQQATQSPQSAA*MPACSL Trigger: CAAGGAGCAAGCAGGCATCCACGCAGCAGATTGAGG...GCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCCCCTTGGCAGCCTGCTTATCAGGTTGCTaGTTTCAAACTCCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKRPKAAPPVLSFSPLAACLSGC*FQTPSF Trigger: AAAAGAAGGAGTTTGAAATCAGCAACCTGATAAGCA...GGCTGCCAAGGGGCTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CCA 90 bp | AGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCGTGATCAGGATGGACTaGTTCTCACGATCCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRRKVNPERQVTQQATQSVIRMD*FSRSVS Trigger: GCTGACGGATCGTGAGAACCAGTCCATCCTGATCAC...GCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCATCTTCTTCTGCAGCTaGATCTCCACAGCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKSKPREASDPASDPKQPIFFCS*ISTACS Trigger: TGAGCAAGCTGTGGAGATCCAGCTGCAGAAGAAGAT...GGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CCA 90 bp | AGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAATGGCCAGGTTGGCATTaGATTGTTCCTCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRRKVNPERQVTQQATQWPGWH*IVPQPP Trigger: AGGAGGCTGAGGAACAATCCAATGCCAACCTGGCCA...TTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR TCA 90 bp | AGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGCACTTTCTCTTCAGGTaGAAAGCCAAGGATATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKPREASDPASDPKQPLLHFLFR*KAKDIN Trigger: ATTGATATCCTTGGCTTTTCACCTGAAGAGAAAGTG...CAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR GCA 90 bp | AGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCATCGGCCAAGCTGTCTaGTTCAGATTGAACCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRRKVNPERQVTQQATQSIGQAV*FRLNLE Trigger: CTCCAGGTTCAATCTGAAGCAGACAGCTTGGCCGAT...GCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCTCAGAGATCTCCTGTTaGAGATTCTTGTTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKSKPREASDPASDPKQPSEISC*RFLFSL Trigger: GAGAGAGAACAAGAATCTGCAACAGGAGATCTCTGA...GGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR GCA 90 bp | TATTTAGTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAATGTCAGCCACTTCAGTaGCATCTGGCTCAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLVSSRRKVNPERQVTQQCQPLQ*HLAQPA Trigger: AGCAGGCTGAGCCAGATGGCACTGAAGTGGCTGACA...TTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGACTAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR TCA 90 bp | GTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAACTCCTTCTTTTTaGGTTTCTCATCAAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSRRKVNPERQVTQQATQTPSF*VSHQAA Trigger: AGCAGCTTGATGAGAAACTCAAAAAGAAGGAGTTTG...GGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CCA 90 bp | AGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCTCAAAAGGCTTATTTTaGGCCTCAATCCTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRRKVNPERQVTQQATQSSKGLF*ASILSF Trigger: GAAGGAGAGGATTGAGGCCCAAAATAAGCCTTTTGA...GCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CCA 90 bp | AGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAACTGGATACAGAAGATaGATTCTCTTCTCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSRRKVNPERQVTQQATQTGYRR*ILFSAA Trigger: TGCTGCTGAGAAGAGAATCCATCTTCTGTATCCAGT...TTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CCA 90 bp | AGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCGTTCTTGTTATAATCTaGGCCAGCTTTTCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRRKVNPERQVTQQATQSVLVII*ASFSSL Trigger: GAGAGATGAAAAGCTGGCCCAGATTATAACAAGAAC...GCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR TCA 90 bp | ATACTTGGCCAATTTCATGGCATTACTATGCTATTCCAACCTCTCTGGGTTATTGACACAGAAGAGGCCTaGGTAGGTATAGATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILGQFHGITMLFQPLWVIDTEEA*VGIDHP Trigger: TGGATGATCTATACCTACTCAGGCCTCTTCTGTGTC...AATAACCCAGAGAGGTTGGAATAGCATAGTAATGCCATGAAATTGGCCAAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
||
| CDS-3UTR GCA 90 bp | TATTTAGTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAATCTTCCACTTCACTCTaGAGCTGTGAAACATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YLVSSRRKVNPERQVTQQSSTSL*SCETSF Trigger: AAATGATGTTTCACAGCTGCAGAGTGAAGTGGAAGA...TTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGACTAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR TCA 90 bp | CACTTAGACTTTAAAAACCTTGAGCTTCTGTTCAAGGAAATGGGTATGGATTTTTTCATGGGGAAGACTTaGTCTTCCTTGACGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLDFKNLELLFKEMGMDFFMGKT*SSLTVR Trigger: TCTCACCGTCAAGGAAGATCAAGTCTTCCCCATGAA...AAAATCCATACCCATTTCCTTGAACAGAAGCTCAAGGTTTTTAAAGTCTAAGTG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
||
| CDS-3UTR CCA 90 bp | GTGAAGCTAAGACTTAGAAGAGAAAATGGCTTCTTAAATGTGAGTTACAGAACTTCAAAAGGCTTATTTTaGGCCTCAATCCTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKLRLRRENGFLNVSYRTSKGLF*ASILSF Trigger: GAAGGAGAGGATTGAGGCCCAAAATAAGCCTTTTGA...AGTTCTGTAACTCACATTTAAGAAGCCATTTTCTCTTCTAAGTCTTAGCTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCCCCTTGGCAGGCGGCGCAGGCCGCGTaGGTCCTCTCCACATCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PASDPKQPLLCFPSAPWQAAQAA*VLSTSI Trigger: GATTGATGTGGAGAGGACCAACGCGGCCTGCGCCGC...CTGCCAAGGGGCTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | AGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGAAGTGGGCCTCGGCCTaGCCTTTGGTAGGCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKPREASDPASDPKQPLLKWASA*PLVGLG Trigger: GCCCAAGCCTACCAAAGGCAAGGCCGAGGCCCACTT...CAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | CCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCGCTTTGCCTCCGACTaGGCCAGCTCATCCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PERQVTQQATQSSPSCAFRFASD*ASSSLV Trigger: AACCAAGGATGAGCTGGCCAAGTCGGAGGCAAAGCG...GAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS GCA 90 bp | GCATCTTTCTCATCCAGCTGTCTGGAGTACTCACCTGCTTCTGTCTaGAGGCGTGCTCTCTGCGCTGTCAGCTCGTTGATGAGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASFSSSCLEYSPASV*RRALCAVSSLMSRC Trigger: GCAGCGGCTCATCAACGAGCTGACAGCGCAGAGAGCACGCCTGCAGACAGAAGCAGGTGAGTACTCCAGACAGCTGGATGAGAAAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | AGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTTGGCCAGGTTGGCATaGGATTGTTCCTCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKPREASDPASDPKQPLLLARLA*DCSSAS Trigger: GGAGGCTGAGGAACAATCCAATGCCAACCTGGCCAA...CAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCCCCTTGGCAGCCCGCATTATACACTTGTaGAACCGTCTGGCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SKRPKAAPPVLSFSPLAARIIHL*NRLAFG Trigger: ACCAAAGGCCAGACGGTTCAACAAGTGTATAATGCG...GGCTGCCAAGGGGCTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | AAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCGACTCCTCCTTCTTCTaGTCCCCAGTGACTGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: KVNPERQVTQQATQSSPSDSSFF*SPVTAI Trigger: AATTGCAGTCACTGGGGACAAGAAGAAGGAGGAGTC...GGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | GTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAGGTTGGCATTGGATaGTTCCTCAGCCTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSSRRKVNPERQVTQQATQVGIG*FLSLLS Trigger: GCTGAGGAGGCTGAGGAACAATCCAATGCCAACCTG...GGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | AGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGGGTCCCCTGCATTTaGCCAGACTCCTCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRRKVNPERQVTQQATQSRVPCI*PDSSFF Trigger: GAAGAAGGAGGAGTCTGGCAAAATGCAGGGGACCCT...GCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCCCCTTGGCAGCCAGGTCATTTTTCTCTTaGAGAAGAGTGACCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKRPKAAPPVLSFSPLAARSFFS*RRVTIF Trigger: GAAGATGGTCACTCTTCTCAAAGAGAAAAATGACCT...GGCTGCCAAGGGGCTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | AAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCAGATTTCCCTTGGCTTaGGCGATGGCCTCTGCATTA | + |
|
Preference number: 5 (lower is better) Translates to: KSKPREASDPASDPKQPLRFPLA*AMASAL Trigger: TAATGCAGAGGCCATCGCCAAAGCCAAGGGAAATCT...GAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | GTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCATGAAGGCGCGGACGTaGTACTGGATACAGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSSRRKVNPERQVTQQATMKART*YWIQKM Trigger: CATCTTCTGTATCCAGTACAACGTCCGCGCCTTCAT...GGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | AGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCGCTGTCTGCTTCAGATaGAACCTGGAGTTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRRKVNPERQVTQQATQSAVCFR*NLELQV Trigger: GACCTGCAACTCCAGGTTCAATCTGAAGCAGACAGC...GCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | AGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCGTTCATGGGGAAGACTaGATCTTCCTTGACGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRRKVNPERQVTQQATQSVHGED*IFLDGE Trigger: CTCACCGTCAAGGAAGATCAAGTCTTCCCCATGAAC...GCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | GCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTGTGCTTTCCTTCAGCCCTTGCATTTAAAACCTaGTATCTCTGCTTAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASDPASDPKQPLLCFPSALAFKT*YLCLKS Trigger: GGACTTTAAGCAGAGATACAAGGTTTTAAATGCAAG...GGCTGAAGGAAAGCACAGGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
||
| CDS-3UTR CAA 90 bp | GTAAGAGCAGAGACTATGATAATGAGACTTTGGGCACCTGCCCTACAGAGTAATGCTAGCCCTGTTGGCTaGGGCAGGCCAGTGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRAETMIMRLWAPALQSNASPVG*GRPVNS Trigger: GGAATTCACTGGCCTGCCCAAGCCAACAGGGCTAGC...ATTACTCTGTAGGGCAGGTGCCCAAAGTCTCATTATCATAGTCTCTGCTCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| CDS-3UTR CAA 90 bp | AGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCACTTTCCCTCCATCCTaGCTTTGTATAACGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: RKVNPERQVTQQATQSSPTFPPS*LCITLF Trigger: GAAAAGCGTTATACAAAGCAAGGATGGAGGGAAAGT...GGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CAA 90 bp | AAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCAGCCCCTCCTTTGTTTTTGATCAATaGTTCACACCTTTCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: KVNPERQVTQQATQSSPSFVFDQ*FTPFLS Trigger: GCTGAGGAAAGGTGTGAACAATTGATCAAAAACAAA...GGAGGGGCTGCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CAA 90 bp | AGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCCTGGATCTCCACAGCTaGCTCATCTTCAATTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: SRRKVNPERQVTQQATQSLDLHS*LIFNFA Trigger: AGCAAAATTGAAGATGAGCAAGCTGTGGAGATCCAG...GCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CAA 90 bp | GTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCTCAAACTCCTTCTTTTaGAGTTTCTCATCAAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: VSSRRKVNPERQVTQQATSNSFF*SFSSSC Trigger: GCAGCTTGATGAGAAACTCAAAAAGAAGGAGTTTGA...GGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CAA 90 bp | AGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAACATTCTGATAGAACCTaGTCGAAGTTTCTCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SSRRKVNPERQVTQQATQHSDRT*SKFLCF Trigger: GAAGCAGAGAAACTTCGACAAGGTTCTATCAGAATG...TTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CAA 90 bp | TATTTAGTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGGAGTCTTCGTTTCATaGGGAATGATACACCGTACG | + |
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Preference number: 5 (lower is better) Translates to: YLVSSRRKVNPERQVTQQGVFVS*GMIHRT Trigger: CGTACGGTGTATCATTCCCAATGAAACGAAGACTCC...TTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGACTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CAA 90 bp | AGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGCGACCCAAAGCGCTTTGAAGAAAACCTaGGTGTGTCCAAATTTATAC | + |
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Preference number: 5 (lower is better) Translates to: SRRKVNPERQVTQQATQSALKKT*VCPNLY Trigger: GTATAAATTTGGACACACCAAGGTTTTCTTCAAAGC...GCTTTGGGTCGCTTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CAA 90 bp | TATTTAGTCAGCAGTAGGAGAAAAGTAAACCCAGAGAGGCAAGTGACCCAGCAAGTCAGAGATCTCCTGTaGCAGATTCTTGTTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: YLVSSRRKVNPERQVTQQVRDLL*QILVLS Trigger: AGAGAGAACAAGAATCTGCAACAGGAGATCTCTGAC...TTGCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGACTAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS-3UTR CAA 90 bp | CACTTAGACTTTAAAAACCTTGAGCTTCTGTTCAAGGAAATGGGTATGGATTTTGTTCATGGGGAAGACTaGATCTTCCTTGACGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: HLDFKNLELLFKEMGMDFVHGED*IFLDGE Trigger: CTCACCGTCAAGGAAGATCAAGTCTTCCCCATGAAC...AAAATCCATACCCATTTCCTTGAACAGAAGCTCAAGGTTTTTAAAGTCTAAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| CDS-3UTR CAA 90 bp | AACCTTGAGCTTCTGTTCAAGGAAATGGGTATGGATTTTGGATGTATGAGATTGACTTTCCCTCCATCCTaGCTTTGTATAACGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: NLELLFKEMGMDFGCMRLTFPPS*LCITLF Trigger: GAAAAGCGTTATACAAAGCAAGGATGGAGGGAAAGT...CAATCTCATACATCCAAAATCCATACCCATTTCCTTGAACAGAAGCTCAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108685.9 |
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| CDS GCA 72 bp | GCTCTCTGCGCTGTCAGCTCGTTGATGAGCCGCTGCTaGTCCTCCTCCTTGCTCTTCAGTTCACTCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALCAVSSLMSRC*SSSLLFSSLTW Trigger: CCAGGTGAGTGAACTGAAGAGCAAGGAGGAGGAGCAGCAGCGGCTCATCAACGAGCTGACAGCGCAGAGAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS GCA 72 bp | TCATCCAGCTGTCTGGAGTACTCACCTGCTTCTGTCTaGAGGCGTGCTCTCTGCGCTGTCAGCTCGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: SSSCLEYSPASV*RRALCAVSSLM Trigger: CATCAACGAGCTGACAGCGCAGAGAGCACGCCTGCAGACAGAAGCAGGTGAGTACTCCAGACAGCTGGATGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS CCA 72 bp | ACTGAGAGACTAAAGCATCTTTCTCATCCAGCTGTCTaGAGTACTCACCTGCTTCTGTCTGCAGGCGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: TERLKHLSHPAV*STHLLLSAGVL Trigger: GAGCACGCCTGCAGACAGAAGCAGGTGAGTACTCCAGACAGCTGGATGAGAAAGATGCTTTAGTCTCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS GCA 72 bp | GCTTCAGCTCCTCAATCTGCTGCGTGGATGCCTGCTTaGTCCTTGACAACTGAGAGACTAAAGCATCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ASAPQSAAWMPA*SLTTERLKHLS Trigger: AGAAAGATGCTTTAGTCTCTCAGTTGTCAAGGAGCAAGCAGGCATCCACGCAGCAGATTGAGGAGCTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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| CDS CCA 72 bp | CATCAAGCTGCTGTTTATCGTTTTCTATGTCCATTGTaGACTCTTGGGCCAGTTTCAGGTCCCCCTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: HQAAVYRFLCPL*TLGPVSGPPPV Trigger: AACTGGAGGGGGACCTGAAACTGGCCCAAGAGTCCACAATGGACATAGAAAACGATAAACAGCAGCTTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019625.12 |
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