RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYH7B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074652

Ensembl transcript IDs: ENSMUST00000092995.6

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCGGGTGGAGTGGCAGATaGAAAGAGACAACAGGATCG +
Preference number: 2 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLGWSGR*KETTGS
Trigger: CGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCC...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
3UTR-3UTR GCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCGACAGTGGCTACTGCTaGAGACAGGGTGTTTATTTG +
Preference number: 2 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLDSGYC*RQGVYL
Trigger: CAAATAAACACCCTGTCTGCAGCAGTAGCCACTGTC...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp GTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCCTGCGGCGGCCGAGGTaGCCCGCTCCAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: VEWQMERDNRIAGVGYPSLRRPR*PAPAPR
Trigger: CCTTGGAGCTGGAGCGGGCCACCTCGGCCGCCGCAG...GGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp TGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTGGTACTCCAGCCGCATaGGGCGGCCCCGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: WSGRWKETTGSQGWGIPPGTPAA*GGPGSE
Trigger: CTCGGAGCCGGGGCCGCCTCATGCGGCTGGAGTACC...AGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGGCCCCCGCTGGGTGCTaGCGTCGGCCAGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: WQMERDNRIAGVGYPSSEAPAGC*RRPAVA
Trigger: AGCGACAGCTGGCCGACGCCAGCACCCAGCGGGGGC...CTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGAGGGCCTGCACTGCATaGGCCAGCGCACCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWRACTA*ASAPLA
Trigger: GGCCAAGGGTGCGCTGGCTCATGCAGTGCAGGCCCT...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGGCCTCCAGCAGCTCCTaGTCAGCCAGCCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWASSSS*SASLRL
Trigger: CAGCCGGAGGCTGGCTGAGCAGGAGCTGCTGGAGGC...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTACTCGTCCTCCAGCTTaGGCCTGCGGGCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WSGRWKETTGSQGWGIPPTRPPA*ACGRPG
Trigger: ACCTGGCCGCCCGCAGGCGCAAGCTGGAGGACGAGT...AGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGCGGTCCTCCTCAGCCTaGAGGTCACCCAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWRSSSA*RSPRAC
Trigger: GCAGGCTCTGGGTGACCTGCAGGCTGAGGAGGACCG...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGACGCTATCGGCCTGCTTaGGGCGCAGGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGRYRPA*GAGQPQ
Trigger: CTGTGGCTGCCCTGCGCCGCAAGCAGGCCGATAGCG...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGTCGAGCCTCCCTCTGTaGCGCCTCGAGTTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWSSLPL*RLEFPL
Trigger: CAGCGGGAACTCGAGGCGGCACAGAGGGAGGCTCGA...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTACAGCAGCCTCGTGGCTaGCTGTGCCTCCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: REGGVADGKRQQDRRGGVQQPRG*LCLHGL
Trigger: CAGGCCATGGAGGCACAGGCAGCCACGAGGCTGCTG...TACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCCTTCCCACCCCGAAGTaGGGCCTGCTCGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPLPTPK*GLLGFL
Trigger: GAGGAAGCCGAGCAGGCCGCACTTCGGGGTGGGAAG...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGATGTGCCTCCATGGCCTaGCGGGTTGCGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGCASMA*RVAWPS
Trigger: GCTGGGCCACGCAACCCGCCAGGCCATGGAGGCACA...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp AGGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTACCCAGAGCCTGCTGGTaGGCCTCCTGCAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: REGGVADGKRQQDRRGGVPRACW*ASCNAF
Trigger: GAAGGCATTGCAGGAGGCTCACCAGCAGGCTCTGGG...TACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp GGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATGCGAATGCAGTAGGTTaGGGCGCTCGGTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRVEWQMERDNRIAGVGYANAVG*GARWPP
Trigger: TGGAGGCCACCGAGCGCCTCAACCTACTGCATTCGC...ATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATTTGTCCTGCTCTGCCTaGAGCTGCAGGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GRVEWQMERDNRIAGVGYLSCSA*SCRARS
Trigger: CGACCTGGCCCTGCAGCTGCAGGCAGAGCAGGACAA...ATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCGAGGTTGTCCTGCTCTaGCTGCAGCTGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPEVVLL*LQLQGQ
Trigger: CTGGCCCTGCAGCTGCAGGCAGAGCAGGACAACCTC...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGATGCACCCCCACGAGCTaGTCATCCTCCACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGCTPTS*SSSTRR
Trigger: CCTGCGGGTGGAGGATGAGCAGCTCGTGGGGGTGCA...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTAGCCACAGTGGCCTCGTaGCTCAGAACTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: REGGVADGKRQQDRRGGVATVAS*LRTASS
Trigger: GGAGGAGGCAGTTCTGAGGCACGAGGCCACTGTGGC...TACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTGCAGGCTGTCCACCTaGTCGCTCAGCTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPCRLST*SLSSAA
Trigger: CGCTGCAGAGCTGAGCGAGCAGGTGGACAGCCTGCA...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTTTCTGCCGGATGCGCTaGAGGCTGTCCACCTGCTCG +
Preference number: 4 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGFCRMR*RLSTCS
Trigger: CGAGCAGGTGGACAGCCTGCAGCGCATCCGGCAGAA...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGGCATCCAGGGAGGCCTaGAGGGATTCCACAGCCCGC +
Preference number: 4 (lower is better)
Translates to: WQMERDNRIAGVGYPSSEASREA*RDSTAR
Trigger: GCGGGCTGTGGAATCCCTGCAGGCCTCCCTGGATGC...CTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCTCAAGGCGTGCCTaGAGCTCCCGCACGGTCTGT +
Preference number: 4 (lower is better)
Translates to: REGGVADGKRQQDRRGGVSSRRA*SSRTVC
Trigger: ACAGACCGTGCGGGAGCTGCAGGCACGCCTTGAGGA...TACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCCTGCAGCAGCCTCGTaGCTGCCTGTGCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: WSGRWKETTGSQGWGIPPPAAAS*LPVPPW
Trigger: CCATGGAGGCACAGGCAGCCACGAGGCTGCTGCAGG...AGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp GTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCCGCGGCTCAGCTGGCTaGTCATGGACTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VEWQMERDNRIAGVGYPSRGSAG*SWTPSP
Trigger: AGGAGAAGGAGTCCATGATCAGCCAGCTGAGCCGCG...GGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGAAATTGTGCCTTCTTaGCCGGCCCGTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWEIVPS*PARLPG
Trigger: CCCTGGGAGACGGGCCGGGCAAGAAGGCACAATTTC...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGGTCTCCTCCAGCTCCTaGCGCTTAGCCTCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWVSSSS*RLASAV
Trigger: TACGGCTGAGGCTAAGCGGCAGGAGCTGGAGGAGAC...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTTGCTCTGCCTGCAGCTaGAGGGCCAGGTCGTTCTTC +
Preference number: 4 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGCSACS*RARSFF
Trigger: GAAGAACGACCTGGCCCTGCAGCTGCAGGCAGAGCA...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGCGCACCCTTGGCCTTaGTTTCTTCCTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWAHPWP*FLPPAA
Trigger: GGCAGCTGGAGGAAGAAAGCAAGGCCAAGGGTGCGC...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCCCTTCTTCTGCCTCTTaGAGCCGCAGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VEWQMERDNRIAGVGYPSPSSAS*SRRASF
Trigger: GAAGCTGGCCCTGCGGCTGCAAGAGGCAGAAGAAGG...GGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTTCCTCCGACTCTGTCTaGAGCCGCAGCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGSSDSV*SRSLAF
Trigger: GAAGGCCAAGCTGCGGCTGCAGACAGAGTCGGAGGA...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCAGCGCCCGCTCCAAGTaGCGCTGCTTCTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPSARSK*RCFLSR
Trigger: CCTGGATAAGAAGCAGCGGCACTTGGAGCGGGCGCT...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGATCGGCAGCCAGCCTCTaGTCCTCATCTCGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGSAASL*SSSRPA
Trigger: AGCAGGGCGAGATGAGGAGCAGAGGCTGGCTGCCGA...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGCTTCACGCCTCTCCTaGGCAGCCTCCTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGASRLS*AASSTS
Trigger: GGAAGTGGAGGAGGCTGCGCAGGAGAGGCGTGAAGC...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp GTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCCTTTCACCCCAGACTTaGGGGGCTCGGTGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: VEWQMERDNRIAGVGYPSLSPQT*GARWSK
Trigger: CTTGCTCCACCGAGCCCCCCAAGTCTGGGGTGAAAG...GGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTATACAGCGGACGAAATaGGGCTGTGTGGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGIQRTK*GCVARR
Trigger: CCTGCGGGCCACACAGCCCCATTTCGTCCGCTGTAT...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGACCGGATCTTGGCCTTaGCCAGTGCGCTCACACGGT +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWTGSWP*PVRSHG
Trigger: ACCGTGTGAGCGCACTGGCCAAGGCCAAGATCCGGT...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp AGGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTAGCTGCACCTTGGACTTaGTCAGCAAGTGGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: REGGVADGKRQQDRRGGVAAPWT*SASGSA
Trigger: AGCGCTGCCACTTGCTGATCAAGTCCAAGGTGCAGC...TACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTTGTTCCTCCTTGAGTTaGGCCTGCAGCAGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGCSSLS*ACSSLV
Trigger: CACGAGGCTGCTGCAGGCTCAACTCAAGGAGGAACA...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGAGGAGCAGCATGTCCTaGAGCTCCGGCTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWRSSMS*SSGFFP
Trigger: AGGGAAGAAGCCGGAGCTGCAGGACATGCTGCTCCT...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGACCAGTTTCTGCCGGATaGGCTGCAGGCTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGPVSAG*AAGCPP
Trigger: AGGTGGACAGCCTGCAGCGCATCCGGCAGAAACTGG...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGCTTCCGGTCCACCTCTaGCTTGACCTGGGACAACTC +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWLPVHL*LDLGQL
Trigger: GAGTTGTCCCAGGTCAAGGCAGAGGTGGACCGGAAG...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCGGCGCAGTGCTTCATTaGGGGCCCTTGTCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: VEWQMERDNRIAGVGYPSGAVLH*GPLSLH
Trigger: ATGCAGAGACAAGGGCCCGCAATGAAGCACTGCGCC...GGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCCCACCAGGTCCTGCATaGGAGCCAGGTTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPPPGPA*EPGSSC
Trigger: ACAGGAAGAACCTGGCTCGCATGCAGGACCTGGTGG...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGCGTCTGGGATGGCACTaGGGTTCAGGATTCGGTACC +
Preference number: 4 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWRLGWH*GSGFGT
Trigger: GGTACCGAATCCTGAACCCCAGTGCCATCCCAGACG...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCACAGCCCGCTGGTaGTTGCGCCTCAGGTTAGTA +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPSTARW*LRLRLV
Trigger: TACTAACCTGAGGCGCAACCACCAGCGGGCTGTGGA...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp GTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCCTCCGGCTTCTTCCCTaGGAGGATCTGGTAGTAGAC +
Preference number: 4 (lower is better)
Translates to: VEWQMERDNRIAGVGYPSLRLLP*EDLVVD
Trigger: GTCTACTACCAGATCCTCTCAGGGAAGAAGCCGGAG...GGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp TGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAAGGCCGAAGTCGATaGAGACCCAGTCGATGCCCT +
Preference number: 4 (lower is better)
Translates to: WSGRWKETTGSQGWGIPPQGRSR*RPSRCP
Trigger: AGGGCATCGACTGGGTCTTCATCGACTTCGGCCTTG...AGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGCCTGAAGCTTGCGTCTaGAGCCTTGGGGAACATGCA +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWPEACV*SLGEHA
Trigger: TGCATGTTCCCCAAGGCTTCAGACGCAAGCTTCAGG...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGCATAGAGCTTGGCCCTaGAGCTTGCGTCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWHRAWP*SLRLKP
Trigger: AGGCTTCAGACGCAAGCTTCAGGGCCAAGCTCTATG...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTGGACCACCTCGAAGTaGGCCTGGTACTTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPWTTSK*AWYLRF
Trigger: GAAACGCAAGTACCAGGCTCACTTCGAGGTGGTCCA...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGCTAGAAGCCCAGCCTTaGAGAACACCTTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWLEAQP*RTPWCG
Trigger: GCCACACCAAGGTGTTCTTCAAGGCTGGGCTTCTAG...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGGCAGCTCCTCCACTTTaGTTTTGGCCTCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWAAPPL*FWPRSA
Trigger: AGCTGAGCGAGGCCAAAATCAAAGTGGAGGAGCTGC...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTCAGGTTATGCAGCACTaGAGCCTCGTTGAGGTGCGT +
Preference number: 4 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGQVMQH*SLVEVR
Trigger: ACGCACCTCAACGAGGCTGCAGTGCTGCATAACCTG...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGATGTCCGCACTCTCAGTaGCGTCTGCCTCAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGCPHSQ*RLPQPV
Trigger: AACAGGCTGAGGCAGACGGCACTGAGAGTGCGGACA...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGACACGAACCCGGGGATaGAGGAGACCTTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WQMERDNRIAGVGYPSSETRTRG*RRPLRR
Trigger: CCTCCTCAAAGGTCTCCTGCATCCCCGGGTTCGTGT...CTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATACGGCAAATACCACCTaGTCCACACTCTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GRVEWQMERDNRIAGVGYTANTT*STLWPL
Trigger: CAAGGGCCAGAGTGTGGAGCAGGTGGTATTTGCCGT...ATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTAACCTTCGCCTCCAGCTaGACCTTGGACTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: REGGVADGKRQQDRRGGVTFASS*TLDLIS
Trigger: GCTGATCAAGTCCAAGGTGCAGCTGGAGGCGAAGGT...TACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCATCTTCTTCTGCAGCTaGACCCCCACGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPIFFCS*TPTSCS
Trigger: TGAGCAGCTCGTGGGGGTGCAGCTGCAGAAGAAGAT...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGAGCCTCGAGTTCCCGCTaGATCTCCTCCTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRASSSR*ISSSCR
Trigger: GCGGCAGGAGGAGGAGATGCAGCGGGAACTCGAGGC...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGTCCTCCAGTGCAGCTTaGAGCTCACTCTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWSSSAA*SSLFSP
Trigger: AGGGGAGAAGAGTGAGCTGCAAGCTGCACTGGAGGA...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGCCTGTGTTCTGCGAATaGAGTAGGTTGAGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWPVFCE*SRLRRS
Trigger: CGAGCGCCTCAACCTACTGCATTCGCAGAACACAGG...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATTTGTCCACCAGGTCCTaGATGCGAGCCAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GRVEWQMERDNRIAGVGYLSTRS*MRARFF
Trigger: GAAGAACCTGGCTCGCATGCAGGACCTGGTGGACAA...ATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCCATACAGCAGTCTGTTaGGGAACCCTTGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPHTAVC*GTLGGR
Trigger: TCTGCCGCCAAGGGTTCCCCAACAGACTGCTGTATG...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGAGGTGTCGTCTGGGATaGCACTGGGGTTCAGGATTC +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWRCRLG*HWGSGF
Trigger: GAATCCTGAACCCCAGTGCCATCCCAGACGACACCT...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGCCTTCTCCAGTTCCTaGATGCTCTTCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGAFSSS*MLFPLR
Trigger: CCTCAGCGGGAAGAGCATCCAGGAACTGGAGAAGGC...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp AGGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTACTTCCAGCGCCTTCTTaGCCTTCTCCAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: REGGVADGKRQQDRRGGVLPAPS*PSPVPG
Trigger: TCCAGGAACTGGAGAAGGCCAAGAAGGCGCTGGAAG...TACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTGCGGAGGTAGCAGGCTaGTTCTCCAAGTTCACTCAT +
Preference number: 4 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGAEVAG*FSKFTH
Trigger: ATGAGTGAACTTGGAGAATCAGCCTGCTACCTCCGC...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCCTTGGCCTTCTCCAGTaGGGAGCATTTGGCATTTGC +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPLGLLQ*GAFGIC
Trigger: GCAAATGCCAAATGCTCCTCACTGGAGAAGGCCAAG...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGATAAGGAACCACGCCTaGGTAGTGGACCACCTCGAA +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWIRNHA*VVDHLE
Trigger: TTCGAGGTGGTCCACTACGCAGGCGTGGTTCCTTAT...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCTGTCACCGTCTCCTaGGTCAGCTTCAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: REGGVADGKRQQDRRGGVSVTVS*VSFKSP
Trigger: AGGAGACTTGAAGCTGACGCAGGAGACGGTGACAGA...TACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTTCCTCGGCCCTAGCCTaGAGCTCCTTGATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: WSGRWKETTGSQGWGIPPSSALA*SSLIFF
Trigger: GAAGAAGATCAAGGAGCTGCAGGCTAGGGCCGAGGA...AGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGAGGAGGCCTGTGTTCTaGGAATGCAGTAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWRRPVF*ECSRLR
Trigger: CCTCAACCTACTGCATTCGCAGAACACAGGCCTCCT...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCAGCTTCTGCACTTaGTTCTTCCCACCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPSSFCT*FFPPRS
Trigger: ACTTCGGGGTGGGAAGAAGCAAGTGCAGAAGCTGGA...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCATGCTTTTTCTGCTCTaGATCCAGCTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VEWQMERDNRIAGVGYPSMLFLL*IQLGLQ
Trigger: CTGGAGGCCGAGCTGGATGCAGAGCAGAAAAAGCAT...GGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGTCGGCATGCTTTTTCTaGTCTGCATCCAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: WQMERDNRIAGVGYPSSESACFF*SASSSA
Trigger: GGCCGAGCTGGATGCAGAGCAGAAAAAGCATGCCGA...CTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTTCTGGGCGAGGCTGCTaGAAATTAGGTGACTTCCCA +
Preference number: 4 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGSGRGC*KLGDFP
Trigger: TGGGAAGTCACCTAATTTCCAGCAGCCTCGCCCAGA...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGAGTCTTGTTCTCGTTaGGGACGATACAGCGGACGA +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWESCSR*GRYSGR
Trigger: TCGTCCGCTGTATCGTCCCCAACGAGAACAAGACTC...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGACCTCCGCGTTGGCTTTaGACAGCAGCCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRPPRWL*TAAAAA
Trigger: AGCTGCAGCGGCTGCTGTCCAAAGCCAACGCGGAGG...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGAGGGCCAGCTTCTTCTTaGCCTCCTCCAGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRGPASS*PPPAPP
Trigger: CGGAGGAGCTGGAGGAGGCCAAGAAGAAGCTGGCCC...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGACCAGTGAGGAGCATTTaGCATTTGCGGCCTCTACGC +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGPVRSI*HLRPLR
Trigger: GCGTAGAGGCCGCAAATGCCAAATGCTCCTCACTGG...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGATTAGCCTCGATGATTTaGTCCTCAAGGGTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGLASMI*SSRVPP
Trigger: AGGGGGCACCCTTGAGGATCAAATCATCGAGGCTAA...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGTGTCCAGGGTCTGATTaGTTCGAGAAACCAGCCATC +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWCPGSD*FEKPAI
Trigger: GATGGCTGGTTTCTCGAATCAATCAGACCCTGGACA...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGTTCATGTTGCCAAAGTaGAGGAGAGCACCCACGATC +
Preference number: 4 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWFMLPK*RRAPTI
Trigger: GATCGTGGGTGCTCTCCTGCACTTTGGCAACATGAA...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCCTCCAGCTTGCGCCTaGGGGCGGCCAGGTCCGCGT +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLPPACA*GRPGPR
Trigger: ACGCGGACCTGGCCGCCCGCAGGCGCAAGCTGGAGG...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTAGTCTCCTTCAAGTTTaGGCTTGGCGCGTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGSLLQV*AWRVLC
Trigger: ACACAGAACGCGCCAAGCGCAAACTTGAAGGAGACT...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGCCTTTGGATGGCATCTaGTTCATACTTGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWPLDGI*FILAPP
Trigger: TGGCGGAGCAAGTATGAAGCAGATGCCATCCAAAGG...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGATTGAGGGCCTCGGCATaGTTTTTCTGCTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGLRASA*FFCSAS
Trigger: GGATGCAGAGCAGAAAAAGCATGCCGAGGCCCTCAA...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTTGCATATATATGAGGTaGGGCCTCGGAGCGACGCTT +
Preference number: 4 (lower is better)
Translates to: WSGRWKETTGSQGWGIPPCIYMR*GLGATL
Trigger: AAGCGTCGCTCCGAGGCCCCACCTCATATATATGCA...AGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCAGTCGTAGGGATTCATaGACAGGAGCAGCATGTCCT +
Preference number: 4 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPSRRDS*TGAACP
Trigger: AGGACATGCTGCTCCTGTCCATGAATCCCTACGACT...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTCCTCCGTCCTTTGGATaGCATCTGCTTCATACTTGC +
Preference number: 4 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGPPSFG*HLLHTC
Trigger: GCAAGTATGAAGCAGATGCCATCCAAAGGACGGAGG...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp AGGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTACAAGAGCCTATTCTGTaGCTTTTGGAAGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: REGGVADGKRQQDRRGGVQEPIL*LLEDGD
Trigger: GTCCCCATCTTCCAAAAGTCACAGAATAGGCTCTTG...TACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp TGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGTCATGGCTGCATCAGTaGTGGCCTTTTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WQMERDNRIAGVGYPSSESWLHQ*WPFWPS
Trigger: AGAAGGCCAAAAAGGCCATCACTGATGCAGCCATGA...CTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGATCCCATGGGACAGTGTaGACCTTCATCATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGSHGTV*TFIISW
Trigger: CCAGGAAATGATGAAGGTGCACACTGTCCCATGGGA...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGTCACTGATCTCCTCCTaGAGATTCTTGTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: WQMERDNRIAGVGYPSSESLISS*RFLFSR
Trigger: GCGGGAGAACAAGAATCTGCAGGAGGAGATCAGTGA...CTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTCCGTTGCAGCGTAGTTaGTGTAACACCAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGPLQRS*CNTKKE
Trigger: TTCCTTCTTGGTGTTACACCAACTACGCTGCAACGG...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGAGGATATCCATTGCATaGTCAGTGGCGATAAGTTCC +
Preference number: 4 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWRISIA*SVAISS
Trigger: GGAACTTATCGCCACTGATCATGCAATGGATATCCT...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGGGCATTATCTGCCACTaGATATATATGAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WQMERDNRIAGVGYPSSEGIICH*IYMRWG
Trigger: GCCCCACCTCATATATATGCAGTGGCAGATAATGCC...CTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGACACGGCTTCATCCAGTaGCGCCATCTCTTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRHGFIQ*RHLFCQ
Trigger: CTGACAGAAGAGATGGCGGCACTGGATGAAGCCGTG...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGTTTCTTACCATCCCATaGGACAGTGTGCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWFLTIP*DSVHLH
Trigger: ATGAAGGTGCACACTGTCCCATGGGATGGTAAGAAA...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTAGTTCTCATAGAGGGTaGCCAAGAGCCTATTCTGTG +
Preference number: 4 (lower is better)
Translates to: WSGRWKETTGSQGWGIPPSSHRG*PRAYSV
Trigger: CACAGAATAGGCTCTTGGCCACCCTCTATGAGAACT...AGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCCCCCGCAGCTCTaGCCGCAGTGCCGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSQPPQL*PQCRQL
Trigger: GAGCTGGCGGCACTGCGGGCAGAGCTGCGGGGGCTG...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAAACTTCTCCTCCAACTaGTGCTTGTCTTGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGNFSSN*CLSCVV
Trigger: CACAACACAAGACAAGCAGCAGTTGGAGGAGAAGTT...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGAGGAGCATTTGGCATTTaGGGCCTCTACGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRGAFGI*GLYAFF
Trigger: GAAGAAGGCGTAGAGGCCGCAAATGCCAAATGCTCC...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTTGGCCTTGGCCAGTaGGCTCACACGGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLLGLGQ*AHTVLL
Trigger: GAGGAGGACCGTGTGAGCGCACTGGCCAAGGCCAAG...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCGGCATCCCTGGACCTTaGCCGCAGCTTGTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLGIPGP*PQLVGL
Trigger: CAGGCCAACAAGCTGCGGGCAAGGTCCAGGGATGCC...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGAACCTGCTCCACACTCTaGCCCTTGGTAACATACTCA +
Preference number: 4 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRTCSTL*PLVTYS
Trigger: TGAGTATGTTACCAAGGGCCAGAGTGTGGAGCAGGT...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCGCAGGGCAGCCACAGTaGCCTCGTGCCTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLAGQPQ*PRASEL
Trigger: CAGTTCTGAGGCACGAGGCCACTGTGGCTGCCCTGC...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGAAGCTCCTCCGTCCTTTaGATGGCATCTGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRSSSVL*MASASY
Trigger: GTATGAAGCAGATGCCATCCAAAGGACGGAGGAGCT...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCGCTGCCGCAGGTTATaGAGCACTGCAGCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLRCRRL*STAASL
Trigger: CAACGAGGCTGCAGTGCTGCATAACCTGCGGCAGCG...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp TGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTGTTGTAGGCATTATCTaGCACTGCATATATATGAGG +
Preference number: 4 (lower is better)
Translates to: WSGRWKETTGSQGWGIPPVVGII*HCIYMR
Trigger: CCTCATATATATGCAGTGGCAGATAATGCCTACAAC...AGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCTTCTTATCCAGGGCTaGGGCGGCCGAGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSLLIQG*GGRGGP
Trigger: CGGGCCACCTCGGCCGCCGCAGCCCTGGATAAGAAG...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCGCTCCAAGTGCCGCTaGTTCTTATCCAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLRSKCR*FLSRAA
Trigger: CGCAGCCCTGGATAAGAAGCAGCGGCACTTGGAGCG...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCCTCGTGGCTGCCTGTaGCTCCATGGCCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSPRGCL*LHGLAG
Trigger: ACCCGCCAGGCCATGGAGGCACAGGCAGCCACGAGG...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGACTATTCTGTGACTTTTaGAAGATGGGGACCACCGTC +
Preference number: 4 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRLFCDF*KMGTTV
Trigger: GACGGTGGTCCCCATCTTCCAAAAGTCACAGAATAG...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCTGTCGCCAGAAATTGTaGCTTCTTGCCCGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLCRQKL*LLARPV
Trigger: GACGGGCCGGGCAAGAAGGCACAATTTCTGGCGACA...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCGATTCCACAGCCCGCTaGTGGTTGCGCCTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLDSTAR*WLRLRL
Trigger: TAACCTGAGGCGCAACCACCAGCGGGCTGTGGAATC...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGACTCTCTGCTTCTGTTTaGACTTCATGTTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRLSASV*TSCCQS
Trigger: ACTTTGGCAACATGAAGTTCAAACAGAAGCAGAGAG...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCAGGTCGATACAAGGCTaGAGGTCAAGGCCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLRSIQG*RSRPKS
Trigger: CGACTTCGGCCTTGACCTGCAGCCTTGTATCGACCT...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCTCCTTGATCTTCTTCTaGAGCTGCACCCCCACGAGC +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLSLIFF*SCTPTS
Trigger: GCTCGTGGGGGTGCAGCTGCAGAAGAAGATCAAGGA...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTTCTTGAGGCGCAGTaGTTCATTGCGGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLLLEAQ*FIAGPC
Trigger: ACAAGGGCCCGCAATGAAGCACTGCGCCTCAAGAAG...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCATCGATGTCTTTCTTaGGCTCCGTGCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLHRCLS*APCTRP
Trigger: AGGACGAGTGCACGGAGCTCAAGAAAGACATCGATG...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCTCTGCGAGGTTGTCCTaGTCTGCCTGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSSARLS*SACSCR
Trigger: CCTGCAGCTGCAGGCAGAGCAGGACAACCTCGCAGA...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCTGTTGTCCACAGTGGTaGCCCCCTGGCTGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSCCPQW*PPGCRS
Trigger: ACTTCTGCAGCCAGGGGGTCACCACTGTGGACAACA...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCGTGAGCCTCCTGCAATaGCTTCTTCTCCTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLVSLLQ*LLLLSQ
Trigger: CTGACTAAGGAGAAGAAGGCATTGCAGGAGGCTCAC...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCAGTTCCTCCAGACTCTaGGCTGCTGAGGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSSSSRL*AAEVFP
Trigger: CGGGAAGACCTCAGCAGCGCAGAGTCTGGAGGAACT...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCACTGTCAGCACCTTCTaGTCTTTGGTCTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLTVSTF*SLVSTV
Trigger: CACTGTGGAGACCAAAGACCAGAAGGTGCTGACAGT...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTTGCGTTTCTTGTCTaGGCGAGGCTGCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLLAFLV*ARLLEI
Trigger: AATTTCCAGCAGCCTCGCCCAGACAAGAAACGCAAG...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCGTGATCAGCATGGACTaGTTCTCTCGGTTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSVISMD*FSRLRS
Trigger: GCTCCGCAACCGAGAGAATCAGTCCATGCTGATCAC...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCACTTCTCATCCACACTaGAGCCCAGGATATCCATTG +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLTSHPH*SPGYPL
Trigger: CAATGGATATCCTGGGCTTCAGTGTGGATGAGAAGT...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCTTTGTGTCCAGGGTCTaGTTGATTCGAGAAACCAGC +
Preference number: 4 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLFVSRV*LIRETS
Trigger: GCTGGTTTCTCGAATCAATCAGACCCTGGACACAAA...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR TCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCGACGCTTGTAGCTCTTaGCCTTGCTCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSDACSS*PCSAAC
Trigger: ACAAGCTGCAGAGCAAGGTCAAGAGCTACAAGCGTC...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCAGTGAGCCTGGTACTTaGGTTTCTTGTCTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSSEPGT*VSCLGE
Trigger: CTCGCCCAGACAAGAAACGCAAGTACCAGGCTCACT...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCAGGATTCGGTACCGCTaGCTGAAGTCAGCATACAGC +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSRIRYR*LKSAYS
Trigger: GCTGTATGCTGACTTCAGGCAGCGGTACCGAATCCT...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCACTGATTCTCTCGGTTaGGGAGCATGTCGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSTDSLG*GACRCR
Trigger: CCTACAACGACATGCTCCGCAACCGAGAGAATCAGT...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR GCA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCTCTCTGTGGCCTTTCTaGTGTCCACAAAGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSSLWPF*CPQRCR
Trigger: ACGACACCTTTGTGGACAGCAGAAAGGCCACAGAGA...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp GGGCAGCCCGAAGCTCTTCCAGCTCAGCCGCCAGCAGTGCAGCCCTaGGCTCGAGGGCTTGACCCTGCTCACGGAGCTCGGCAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GQPEALPAQPPAVQP*ARGLDPAHGARQPA
Trigger: GGCTGGCTGCCGAGCTCCGTGAGCAGGGTCAAGCCCTCGAGCGCAGGGCTGCACTGCTGGCGGCTGAGCTGGAAGAGCTTCGGGCTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp CTCCTCCAGCGCCCGCTCCAAGTGCCGCTGCTTCTTATCCAGGGCTaGGGCGGCCGAGGTGGCCCGCTCCAGCTCCAAGGTCACATCCTC +
Preference number: 5 (lower is better)
Translates to: LLQRPLQVPLLLIQG*GGRGGPLQLQGHIL
Trigger: GAGGATGTGACCTTGGAGCTGGAGCGGGCCACCTCGGCCGCCGCAGCCCTGGATAAGAAGCAGCGGCACTTGGAGCGGGCGCTGGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp CTGTTCCAGGGCAGCCCGAAGCTCTTCCAGCTCAGCCGCCAGCAGTaGAGCCCTGCGCTCGAGGGCTTGACCCTGCTCACGGAGCTCGGC +
Preference number: 5 (lower is better)
Translates to: LFQGSPKLFQLSRQQ*SPALEGLTLLTELG
Trigger: GCCGAGCTCCGTGAGCAGGGTCAAGCCCTCGAGCGCAGGGCTGCACTGCTGGCGGCTGAGCTGGAAGAGCTTCGGGCTGCCCTGGAACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp ATGCGCTGGTACTCCAGCCGCATGAGGCGGCCCCGGCTCCGAGCCTaGAGCAGTGTCAACACCTTAGCCAGACGCTGGTCCCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: MRWYSSRMRRPRLRA*SSVNTLARRWSRSS
Trigger: GGAGCTGCGGGACCAGCGTCTGGCTAAGGTGTTGACACTGCTGCAGGCTCGGAGCCGGGGCCGCCTCATGCGGCTGGAGTACCAGCGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGCACTCGTCCTCCAGCTaGCGCCTGCGGGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWHSSSS*RLRAAR
Trigger: CCTGGCCGCCCGCAGGCGCAAGCTGGAGGACGAGTG...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 90 bp GCCAGCCTCTGCTCCTCATCTCGCCCTGCTTGTTCCTCCTTGAGTTaGGCCTGCAGCAGCCTCGTGGCTGCCTGTGCCTCCATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ASLCSSSRPACSSLS*ACSSLVAACASMAW
Trigger: CCAGGCCATGGAGGCACAGGCAGCCACGAGGCTGCTGCAGGCTCAACTCAAGGAGGAACAAGCAGGGCGAGATGAGGAGCAGAGGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 90 bp AGTTCCTCCAGACTCTGCGCTGCTGAGGTCTTCCCGCGGCTCAGCTaGCTGATCATGGACTCCTTCTCCTCCAGCAGGCGGCCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSSRLCAAEVFPRLS*LIMDSFSSSRRPSS
Trigger: GGAGCTGGGCCGCCTGCTGGAGGAGAAGGAGTCCATGATCAGCCAGCTGAGCCGCGGGAAGACCTCAGCAGCGCAGAGTCTGGAGGAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp TCCTCCAGCTCCTCGGCCCTAGCCTGCAGCTCCTTGATCTTCTTCTaGAGCTGCACCCCCACGAGCTGCTCATCCTCCACCCGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SSSSSALACSSLIFF*SCTPTSCSSSTRRF
Trigger: GAACCTGCGGGTGGAGGATGAGCAGCTCGTGGGGGTGCAGCTGCAGAAGAAGATCAAGGAGCTGCAGGCTAGGGCCGAGGAGCTGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp TTCTCCTTTTCCAGTTTCTGCCGGATGCGCTGCAGGCTGTCCACCTaGTCGCTCAGCTCTGCAGCGCTATCGGCCTGCTTGCGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: FSFSSFCRMRCRLST*SLSSAALSACLRRR
Trigger: CCTGCGCCGCAAGCAGGCCGATAGCGCTGCAGAGCTGAGCGAGCAGGTGGACAGCCTGCAGCGCATCCGGCAGAAACTGGAAAAGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp GTTTGTAACCGCCCCCGCTGGGTGCTGGCGTCGGCCAGCTGTCGCTaGAGCTCCTCCACTTTGATTTTGGCCTCGCTCAGCTGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VCNRPRWVLASASCR*SSSTLILASLSWSS
Trigger: TGAGGACCAGCTGAGCGAGGCCAAAATCAAAGTGGAGGAGCTGCAGCGACAGCTGGCCGACGCCAGCACCCAGCGGGGGCGGTTACAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 90 bp CCTCGCTCAGCTGGTCCTCATAGGTCCGACACAGCTTTTCCGCACTaGCCTTGCCACGGGCCAGAGTTTCCACGCTGGCGCCCAGATCGT +
Preference number: 5 (lower is better)
Translates to: PRSAGPHRSDTAFPH*PCHGPEFPRWRPDR
Trigger: ACGATCTGGGCGCCAGCGTGGAAACTCTGGCCCGTGGCAAGGCCAGTGCGGAAAAGCTGTGTCGGACCTATGAGGACCAGCTGAGCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp TCAGCTGGTCCTCATAGGTCCGACACAGCTTTTCCGCACTGGCCTTaGCACGGGCCAGAGTTTCCACGCTGGCGCCCAGATCGTCCACCT +
Preference number: 5 (lower is better)
Translates to: SAGPHRSDTAFPHWP*HGPEFPRWRPDRPP
Trigger: AGGTGGACGATCTGGGCGCCAGCGTGGAAACTCTGGCCCGTGGCAAGGCCAGTGCGGAAAAGCTGTGTCGGACCTATGAGGACCAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp GGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATGGATGCAGGAGACCTTaGAGGAGGTCCCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GRVEWQMERDNRIAGVGYGCRRP*RRSPLL
Trigger: CAGCAGCGGGGACCTCCTCAAAGGTCTCCTGCATCC...ATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGAACCGGATCTTGGCCTaGGCCAGTGCGCTCACACGG +
Preference number: 5 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWNRILA*ASALTR
Trigger: CCGTGTGAGCGCACTGGCCAAGGCCAAGATCCGGTT...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGACCTCCGCGTTGGCTTaGGACAGCAGCCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: WQMERDNRIAGVGYPSSETSALA*DSSRCS
Trigger: GCTGCAGCGGCTGCTGTCCAAAGCCAACGCGGAGGT...CTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCGCCTTCTTCTGCCTCTaGCAGCCGCAGGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPAFFCL*QPQGQL
Trigger: AAGCTGGCCCTGCGGCTGCAAGAGGCAGAAGAAGGC...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGTGCGAATGCAGTAGGTaGAGGCGCTCGGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWCECSR*RRSVAS
Trigger: GGAGGCCACCGAGCGCCTCAACCTACTGCATTCGCA...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGACCTTGCCCGCAGCTaGTTGGCCTGGGTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGDLARS*LAWVSA
Trigger: GGCAGAGACCCAGGCCAACAAGCTGCGGGCAAGGTC...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp CCTCAAGGGTGCCCCCTGTCTTTGTCGCCAGAAATTGTGCCTTCTTaGCCGGCCCGTCTCCCAGGGCAGCGACGATGGCAAAGTACTGAA +
Preference number: 5 (lower is better)
Translates to: PQGCPLSLSPEIVPS*PARLPGQRRWQSTE
Trigger: TTCAGTACTTTGCCATCGTCGCTGCCCTGGGAGACGGGCCGGGCAAGAAGGCACAATTTCTGGCGACAAAGACAGGGGGCACCCTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp GATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGTCGCCGTCATCCATGTaGTCCACAGTGGTGACCCCC +
Preference number: 5 (lower is better)
Translates to: DGKRQQDRRGGVSLLRAWSPSSM*STVVTP
Trigger: GGGGGTCACCACTGTGGACAACATGGATGACGGCGA...CCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTGGGTGCATACAGCAGTCTGTaGGGGAACCCTTGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: WKETTGSQGWGIPPQSLGAYSSL*GNPWRQ
Trigger: CTGCCGCCAAGGGTTCCCCAACAGACTGCTGTATGC...ACCCAGGCTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGAGCGCTATCGGCCTGCTaGCGGCGCAGGGCAGCCACA +
Preference number: 5 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRALSAC*RRRAAT
Trigger: TGTGGCTGCCCTGCGCCGCAAGCAGGCCGATAGCGC...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp GTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCAGCGCACCCTTGGCCTaGCTTTCTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VEWQMERDNRIAGVGYPSSAPLA*LSSSSC
Trigger: GCAGCTGGAGGAAGAAAGCAAGGCCAAGGGTGCGCT...GGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCCTTCATTGCGGGCCCTaGTCTCTGCATCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPLHCGP*SLHPGR
Trigger: CCTCCCTGGATGCAGAGACAAGGGCCCGCAATGAAG...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp GTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCAGGCGCAGTGCTTCATaGCGGGCCCTTGTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: VEWQMERDNRIAGVGYPSRRSAS*RALVSA
Trigger: TGCAGAGACAAGGGCCCGCAATGAAGCACTGCGCCT...GGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCCGGTACTTAGCCAGGTaGGTACTGGCCTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPRYLAR*VLACCS
Trigger: GGAGCAGCAGGCCAGTACCAACCTGGCTAAGTACCG...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 90 bp CACATCCTCCGACTCTGTCTGCAGCCGCAGCTTGGCCTTCTCCAGTaGGGAGCATTTGGCATTTGCGGCCTCTACGCCTTCTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: HILRLCLQPQLGLLQ*GAFGICGLYAFFCL
Trigger: GAGGCAGAAGAAGGCGTAGAGGCCGCAAATGCCAAATGCTCCTCACTGGAGAAGGCCAAGCTGCGGCTGCAGACAGAGTCGGAGGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp GATTTGATCCTCAAGGGTGCCCCCTGTCTTTGTCGCCAGAAATTGTaGCTTCTTGCCCGGCCCGTCTCCCAGGGCAGCGACGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: DLILKGAPCLCRQKL*LLARPVSQGSDDGK
Trigger: TTTGCCATCGTCGCTGCCCTGGGAGACGGGCCGGGCAAGAAGGCACAATTTCTGGCGACAAAGACAGGGGGCACCCTTGAGGATCAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTTCTGCATCTGCGAGGTaGTCCTGCTCTGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: WSGRWKETTGSQGWGIPPSASAR*SCSACS
Trigger: GCTGCAGGCAGAGCAGGACAACCTCGCAGATGCAGA...AGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp GGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATGCCTCCAGCTGCACCTaGGACTTGATCAGCAAGTGG +
Preference number: 5 (lower is better)
Translates to: GRVEWQMERDNRIAGVGYASSCT*DLISKW
Trigger: CCACTTGCTGATCAAGTCCAAGGTGCAGCTGGAGGC...ATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTGCATCTGCTTCATACTaGCTCCGCCACTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: WSGRWKETTGSQGWGIPPASASY*LRHWAT
Trigger: GGTGGCCCAGTGGCGGAGCAAGTATGAAGCAGATGC...AGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGCCTTCCAGCGCCTTCTaGGCCTTCTCCAGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: WQMERDNRIAGVGYPSSEPSSAF*AFSSSW
Trigger: CCAGGAACTGGAGAAGGCCAAGAAGGCGCTGGAAGG...CTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp AGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTGTTTACGCACCCCCTaGAGGGCCTCGGCATGCTTT +
Preference number: 5 (lower is better)
Translates to: RVEWQMERDNRIAGVGYPCLRTP*RASACF
Trigger: AAAGCATGCCGAGGCCCTCAAGGGGGTGCGTAAACA...GGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 90 bp AGCTGCACCCCCACGAGCTGCTCATCCTCCACCCGCAGGTTCAGCTaGCTCAGCTCCGAATCCTTCTTCTTCAACTTCTCCTCCAACTGC +
Preference number: 5 (lower is better)
Translates to: SCTPTSCSSSTRRFS*LSSESFFFNFSSNC
Trigger: GCAGTTGGAGGAGAAGTTGAAGAAGAAGGATTCGGAGCTGAGTCAGCTGAACCTGCGGGTGGAGGATGAGCAGCTCGTGGGGGTGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 90 bp TCACTCTTCTCCCCTTCCAGCGCCTTCTTGGCCTTCTCCAGTTCCTaGATGCTCTTCCCGCTGAGGCTGACCTGGTCTGTAAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: SLFSPSSAFLAFSSS*MLFPLRLTWSVRSL
Trigger: CAGTGACCTTACAGACCAGGTCAGCCTCAGCGGGAAGAGCATCCAGGAACTGGAGAAGGCCAAGAAGGCGCTGGAAGGGGAGAAGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGGGTGGGTTCATGGGTaGCATCTCCGTTTCACGCAC +
Preference number: 5 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGGWVHG*HLRFTH
Trigger: GTGCGTGAAACGGAGATGCAACCCATGAACCCACCC...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp GTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCCCTAGAAGCCCAGCCTaGAAGAACACCTTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: VEWQMERDNRIAGVGYPSPRSPA*KNTLVW
Trigger: CCACACCAAGGTGTTCTTCAAGGCTGGGCTTCTAGG...GGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGCTGAGTGACACTGACTaGAGTCTCCTCCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWLSDTD*SLLQLL
Trigger: CAGGAGCTGGAGGAGACTCAAGTCAGTGTCACTCAG...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGTGCAGCTCCTCCACTTaGATTTTGGCCTCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWCSSST*ILASLS
Trigger: GCTGAGCGAGGCCAAAATCAAAGTGGAGGAGCTGCA...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGAGGGCATCCCTGGACCTaGCCCGCAGCTTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRGHPWT*PAACWP
Trigger: AGGCCAACAAGCTGCGGGCAAGGTCCAGGGATGCCC...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 90 bp ATTCATGGACAGGAGCAGCATGTCCTGCAGCTCCGGCTTCTTCCCTaGGAGGATCTGGTAGTAGACATGGTAACCACGCTCACCGGGCAG +
Preference number: 5 (lower is better)
Translates to: IHGQEQHVLQLRLLP*EDLVVDMVTTLTGQ
Trigger: CTGCCCGGTGAGCGTGGTTACCATGTCTACTACCAGATCCTCTCAGGGAAGAAGCCGGAGCTGCAGGACATGCTGCTCCTGTCCATGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 90 bp GAGCATGTCGTTGTAGGCATTATCTGCCACTGCATATATATGAGGTaGGGCCTCGGAGCGACGCTTGCCCTTGTAGGCAGCCACCACAGC +
Preference number: 5 (lower is better)
Translates to: EHVVVGIICHCIYMR*GLGATLALVGSHHS
Trigger: GCTGTGGTGGCTGCCTACAAGGGCAAGCGTCGCTCCGAGGCCCCACCTCATATATATGCAGTGGCAGATAATGCCTACAACGACATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGGTTAGCCTCGATGATTaGATCCTCAAGGGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: WQMERDNRIAGVGYPSSEVSLDD*ILKGAP
Trigger: GGGGGCACCCTTGAGGATCAAATCATCGAGGCTAAC...CTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp AGGGAGGGTGGAGTGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTACCAAAACGGGAGGAGTaGTCGTTCCTCAGAGTCTTG +
Preference number: 5 (lower is better)
Translates to: REGGVADGKRQQDRRGGVPKREE*SFLRVL
Trigger: CAAGACTCTGAGGAACGACAACTCCTCCCGTTTTGG...TACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCACTCCACCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGAGTGGTCATCGATGTCTTTCTaGAGCTCCGTGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: CCRQGVYLGFRGSGRVEWSSMSF*SSVHSS
Trigger: GGACGAGTGCACGGAGCTCAAGAAAGACATCGATGA...CCACTCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGATCCTCCACTTTGATTTaGGCCTCGCTCAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGSSTLI*ASLSWS
Trigger: GGACCAGCTGAGCGAGGCCAAAATCAAAGTGGAGGA...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGATCCAGTGAGGAGCATTaGGCATTTGCGGCCTCTACG +
Preference number: 5 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGSSEEH*AFAAST
Trigger: CGTAGAGGCCGCAAATGCCAAATGCTCCTCACTGGA...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp GGACTGATTCTCTCGGTTGCGGAGCATGTCGTTGTAGGCATTATCTaGCACTGCATATATATGAGGTGGGGCCTCGGAGCGACGCTTGCC +
Preference number: 5 (lower is better)
Translates to: GLILSVAEHVVVGII*HCIYMRWGLGATLA
Trigger: GGCAAGCGTCGCTCCGAGGCCCCACCTCATATATATGCAGTGGCAGATAATGCCTACAACGACATGCTCCGCAACCGAGAGAATCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp CTACTGCTGCAGACAGGGTGTTTATTTGGGGTTCAGGGGCTCAGGGAGGGTGGACAGCTCCTCCGTCCTTaGGATGGCATCTGCTTCATA +
Preference number: 5 (lower is better)
Translates to: LLLQTGCLFGVQGLREGGQLLRP*DGICFI
Trigger: TATGAAGCAGATGCCATCCAAAGGACGGAGGAGCTG...TCCACCCTCCCTGAGCCCCTGAACCCCAAATAAACACCCTGTCTGCAGCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGACTCCAGCTTCTGCACTaGCTTCTTCCCACCCCGAAG +
Preference number: 5 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRLQLLH*LLPTPK
Trigger: CTTCGGGGTGGGAAGAAGCAAGTGCAGAAGCTGGAG...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp ATTCTCTCGGTTGCGGAGCATGTCGTTGTAGGCATTATCTGCCACTaGATATATATGAGGTGGGGCCTCGGAGCGACGCTTGCCCTTGTA +
Preference number: 5 (lower is better)
Translates to: ILSVAEHVVVGIICH*IYMRWGLGATLALV
Trigger: TACAAGGGCAAGCGTCGCTCCGAGGCCCCACCTCATATATATGCAGTGGCAGATAATGCCTACAACGACATGCTCCGCAACCGAGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGGCAGATGGAAAGAGACAACAGGATCGCAGGGGTGGGGTATCCCTCCTCAGAGGTCAGGTTCTTCACCTaGTTCTCTGTGGCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: WQMERDNRIAGVGYPSSEVRFFT*FSVACF
Trigger: GAAACAAGCCACAGAGAACAAGGTGAAGAACCTGAC...CTCTGAGGAGGGATACCCCACCCCTGCGATCCTGTTGTCTCTTTCCATCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp TGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCCTCTAGCCCCAAGAATGACCCCTGGAGTCTaGTTCTCGTTGGGGACGATA +
Preference number: 5 (lower is better)
Translates to: CGPDFVHDVLFPAPLAPRMTPGV*FSLGTI
Trigger: TATCGTCCCCAACGAGAACAAGACTCCAGGGGTCAT...TCTTGGGGCTAGAGGAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 90 bp CTGGTACTTGCGTTTCTTGTCTGGGCGAGGCTGCTGGAAATTAGGTaGCTTCCCAGAATGATTGTCATAGAGCTTGGCCCTGAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: LVLAFLVWARLLEIR*LPRMIVIELGPEAC
Trigger: GCAAGCTTCAGGGCCAAGCTCTATGACAATCATTCTGGGAAGTCACCTAATTTCCAGCAGCCTCGCCCAGACAAGAAACGCAAGTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 90 bp ATAGCAGGCACACTTCTCATCCACACTGAAGCCCAGGATATCCATTaGATGATCAGTGGCGATAAGTTCCTCGCCGTCATCCATGTTGTC +
Preference number: 5 (lower is better)
Translates to: IAGTLLIHTEAQDIH*MISGDKFLAVIHVV
Trigger: GACAACATGGATGACGGCGAGGAACTTATCGCCACTGATCATGCAATGGATATCCTGGGCTTCAGTGTGGATGAGAAGTGTGCCTGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCAGAAATTGTGCCTTCTaGCCCGGCCCGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLRNCAF*PGPSPR
Trigger: CCTGGGAGACGGGCCGGGCAAGAAGGCACAATTTCT...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCGCGCAGCTTCTTCTCTaGCTCCAGGGAGCACTCCAG +
Preference number: 5 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLAQLLL*LQGALQ
Trigger: CTGGAGTGCTCCCTGGAGCAAGAGAAGAAGCTGCGC...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCCATGGCCTGGCGGGTaGCGTGGCCCAGCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSPWPGG*RGPAVA
Trigger: AGCTACAGCTGGGCCACGCAACCCGCCAGGCCATGG...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCTGGTACTTGCGTTTCTaGTCTGGGCGAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLWYLRF*SGRGCW
Trigger: CCAGCAGCCTCGCCCAGACAAGAAACGCAAGTACCA...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCTTGTTCCTCCTTGAGTaGAGCCTGCAGCAGCCTCGT +
Preference number: 5 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLLFLLE*SLQQPR
Trigger: ACGAGGCTGCTGCAGGCTCAACTCAAGGAGGAACAA...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp ATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCAGCTCGTCTCCACAGTGACTTaGCCTCCAGTAGCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: ILKTDVDLTLSMMFCSQLVSTVT*PPVASV
Trigger: GACTGAAGCTACTGGAGGCAAAGTCACTGTGGAGAC...GAGCTGGGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCAGCTGCACCTTGGACTaGATCAGCAAGTGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSSCTLD*ISKWQR
Trigger: GCGCTGCCACTTGCTGATCAAGTCCAAGGTGCAGCT...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCCTCCAGATCCTCCACTaGCTGTTCCAACCGGATCTT +
Preference number: 5 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSLQILH*LFQPDL
Trigger: AAGATCCGGTTGGAACAGCAAGTGGAGGATCTGGAG...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS-3UTR CAA 90 bp AACTTTATTTTAAAGACTGATGTGGACCTGACTTTGTCCATGATGTTCTGTTCCAGCACCTTCTGGTCTTaGGTCTCCACAGTGACTTTG +
Preference number: 5 (lower is better)
Translates to: NFILKTDVDLTLSMMFCSSTFWS*VSTVTL
Trigger: CAAAGTCACTGTGGAGACCAAAGACCAGAAGGTGCT...GGAACAGAACATCATGGACAAAGTCAGGTCCACATCAGTCTTTAAAATAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp CTCAGCTCCTCCAGCTCCCGCGCTGCCTCGGCTCGCTaGTTTTCCACGCGGGCGCGGGCTGCTCGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: LSSSSSRAASAR*FSTRARAARSA
Trigger: GGCGGAGCGAGCAGCCCGCGCCCGCGTGGAAAAGCAGCGAGCCGAGGCAGCGCGGGAGCTGGAGGAGCTGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp GCTCCCGCCGCAGCCGGCCCAACTCAGCCTCACGCTTaGGGCAACCCTCACGCTGCCCCGCGGAAGCTCCGC +
Preference number: 6 (lower is better)
Translates to: APAAAGPTQPHA*GNPHAAPRKLR
Trigger: GCGGAGCTTCCGCGGGGCAGCGTGAGGGTTGCCGCAAGCGTGAGGCTGAGTTGGGCCGGCTGCGGCGGGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 72 bp TCAGCCGCCAGCAGTGCAGCCCTGCGCTCGAGGGCTTaGCCCTGCTCACGGAGCTCGGCAGCCAGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: SAASSAALRSRA*PCSRSSAASLC
Trigger: GCAGAGGCTGGCTGCCGAGCTCCGTGAGCAGGGTCAAGCCCTCGAGCGCAGGGCTGCACTGCTGGCGGCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp CGCCCGCTCCAAGTGCCGCTGCTTCTTATCCAGGGCTaGGGCGGCCGAGGTGGCCCGCTCCAGCTCCAAGGT +
Preference number: 6 (lower is better)
Translates to: RPLQVPLLLIQG*GGRGGPLQLQG
Trigger: ACCTTGGAGCTGGAGCGGGCCACCTCGGCCGCCGCAGCCCTGGATAAGAAGCAGCGGCACTTGGAGCGGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp GATGCGCTGCAGGCTGTCCACCTGCTCGCTCAGCTCTaGAGCGCTATCGGCCTGCTTGCGGCGCAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: DALQAVHLLAQL*SAIGLLAAQGS
Trigger: GCTGCCCTGCGCCGCAAGCAGGCCGATAGCGCTGCAGAGCTGAGCGAGCAGGTGGACAGCCTGCAGCGCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp GGCAGCCCGAAGCTCTTCCAGCTCAGCCGCCAGCAGTaGAGCCCTGCGCTCGAGGGCTTGACCCTGCTCACG +
Preference number: 6 (lower is better)
Translates to: GSPKLFQLSRQQ*SPALEGLTLLT
Trigger: CGTGAGCAGGGTCAAGCCCTCGAGCGCAGGGCTGCACTGCTGGCGGCTGAGCTGGAAGAGCTTCGGGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 72 bp CCCAGCTCCCCATTCTCCGTTTGTAACCGCCCCCGCTaGGTGCTGGCGTCGGCCAGCTGTCGCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: PSSPFSVCNRPR*VLASASCRCSS
Trigger: GGAGCTGCAGCGACAGCTGGCCGACGCCAGCACCCAGCGGGGGCGGTTACAAACGGAGAATGGGGAGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 72 bp GAGCCTGCAGCAGCCTCGTGGCTGCCTGTGCCTCCATaGCCTGGCGGGTTGCGTGGCCCAGCTGTAGCTCCA +
Preference number: 6 (lower is better)
Translates to: EPAAASWLPVPP*PGGLRGPAVAP
Trigger: TGGAGCTACAGCTGGGCCACGCAACCCGCCAGGCCATGGAGGCACAGGCAGCCACGAGGCTGCTGCAGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp TACTCCAGCCGCATGAGGCGGCCCCGGCTCCGAGCCTaGAGCAGTGTCAACACCTTAGCCAGACGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: YSSRMRRPRLRA*SSVNTLARRWS
Trigger: GGACCAGCGTCTGGCTAAGGTGTTGACACTGCTGCAGGCTCGGAGCCGGGGCCGCCTCATGCGGCTGGAGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 72 bp ATGGTGAACAGGGCATCCCTTCCCCCTAGCATGCGCTaGTACTCCAGCCGCATGAGGCGGCCCCGGCTCCGA +
Preference number: 6 (lower is better)
Translates to: MVNRASLPPSMR*YSSRMRRPRLR
Trigger: TCGGAGCCGGGGCCGCCTCATGCGGCTGGAGTACCAGCGCATGCTAGGGGGAAGGGATGCCCTGTTCACCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 72 bp TCTGCGCTGCTGAGGTCTTCCCGCGGCTCAGCTGGCTaGTCATGGACTCCTTCTCCTCCAGCAGGCGGCCCA +
Preference number: 6 (lower is better)
Translates to: SALLRSSRGSAG*SWTPSPPAGGP
Trigger: TGGGCCGCCTGCTGGAGGAGAAGGAGTCCATGATCAGCCAGCTGAGCCGCGGGAAGACCTCAGCAGCGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp TCTTCCTCCAGCTGCCGCCGAAGTTCCTCCAGACTCTaGGCTGCTGAGGTCTTCCCGCGGCTCAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SSSSCRRSSSRL*AAEVFPRLSWL
Trigger: CAGCCAGCTGAGCCGCGGGAAGACCTCAGCAGCGCAGAGTCTGGAGGAACTTCGGCGGCAGCTGGAGGAAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp TCGGAGGAGGTCGCAGTCGTGCCGCAGGGCCTGCACTaGATGAGCCAGCGCACCCTTGGCCTTGCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: SEEVAVVPQGLH*MSQRTLGLAFF
Trigger: GAAGAAAGCAAGGCCAAGGGTGCGCTGGCTCATGCAGTGCAGGCCCTGCGGCACGACTGCGACCTCCTCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 72 bp CAGCTGCCGCCGAAGTTCCTCCAGACTCTGCGCTGCTaGGGTCTTCCCGCGGCTCAGCTGGCTGATCATGGA +
Preference number: 6 (lower is better)
Translates to: QLPPKFLQTLRC*GLPAAQLADHG
Trigger: TCCATGATCAGCCAGCTGAGCCGCGGGAAGACCTCAGCAGCGCAGAGTCTGGAGGAACTTCGGCGGCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp CTCAAGGGTGCCCCCTGTCTTTGTCGCCAGAAATTGTaGCTTCTTGCCCGGCCCGTCTCCCAGGGCAGCGAC +
Preference number: 6 (lower is better)
Translates to: LKGAPCLCRQKL*LLARPVSQGSD
Trigger: GTCGCTGCCCTGGGAGACGGGCCGGGCAAGAAGGCACAATTTCTGGCGACAAAGACAGGGGGCACCCTTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp TCCAGTTTCTGCCGGATGCGCTGCAGGCTGTCCACCTaGTCGCTCAGCTCTGCAGCGCTATCGGCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SSFCRMRCRLST*SLSSAALSACL
Trigger: CAAGCAGGCCGATAGCGCTGCAGAGCTGAGCGAGCAGGTGGACAGCCTGCAGCGCATCCGGCAGAAACTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp GGGCCTGCACTGCATGAGCCAGCGCACCCTTGGCCTTaGTTTCTTCCTCCAGCTGCCGCCGAAGTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: GPALHEPAHPWP*FLPPAAAEVPP
Trigger: TGGAGGAACTTCGGCGGCAGCTGGAGGAAGAAAGCAAGGCCAAGGGTGCGCTGGCTCATGCAGTGCAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 72 bp GCTGGTCCTCATAGGTCCGACACAGCTTTTCCGCACTaGCCTTGCCACGGGCCAGAGTTTCCACGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: AGPHRSDTAFPH*PCHGPEFPRWR
Trigger: GCGCCAGCGTGGAAACTCTGGCCCGTGGCAAGGCCAGTGCGGAAAAGCTGTGTCGGACCTATGAGGACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 72 bp AGACTCTGCGCTGCTGAGGTCTTCCCGCGGCTCAGCTaGCTGATCATGGACTCCTTCTCCTCCAGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: RLCAAEVFPRLS*LIMDSFSSSRR
Trigger: CCGCCTGCTGGAGGAGAAGGAGTCCATGATCAGCCAGCTGAGCCGCGGGAAGACCTCAGCAGCGCAGAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CAA 90 bp AGCCAGCCTCTGCTCCTCATCTCGCCCTGCTTGTTCCTCCTTGAGTaGAGCCTGCAGCAGCCTCGTGGCTGCCTGTGCCTCCATGGCCTG +
Preference number: 6 (lower is better)
Translates to: SQPLLLISPCLFLLE*SLQQPRGCLCLHGL
Trigger: CAGGCCATGGAGGCACAGGCAGCCACGAGGCTGCTGCAGGCTCAACTCAAGGAGGAACAAGCAGGGCGAGATGAGGAGCAGAGGCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp CCTCATAGGTCCGACACAGCTTTTCCGCACTGGCCTTaGCACGGGCCAGAGTTTCCACGCTGGCGCCCAGAT +
Preference number: 6 (lower is better)
Translates to: PHRSDTAFPHWP*HGPEFPRWRPD
Trigger: ATCTGGGCGCCAGCGTGGAAACTCTGGCCCGTGGCAAGGCCAGTGCGGAAAAGCTGTGTCGGACCTATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp GAGCTCGGCAGCCAGCCTCTGCTCCTCATCTCGCCCTaGTTGTTCCTCCTTGAGTTGAGCCTGCAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: ELGSQPLLLISP*LFLLELSLQQP
Trigger: AGGCTGCTGCAGGCTCAACTCAAGGAGGAACAAGCAGGGCGAGATGAGGAGCAGAGGCTGGCTGCCGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp CGCTCGTGTTTACGCACCCCCTTGAGGGCCTCGGCATaGTTTTTCTGCTCTGCATCCAGCTCGGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RSCLRTPLRASA*FFCSASSSASS
Trigger: GCTGGAGGCCGAGCTGGATGCAGAGCAGAAAAAGCATGCCGAGGCCCTCAAGGGGGTGCGTAAACACGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 72 bp CGAGCCTGCAGCAGTGTCAACACCTTAGCCAGACGCTaGTCCCGCAGCTCCTCCAGGATGCCTAGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: RACSSVNTLARR*SRSSSRMPRSP
Trigger: TGGGCTTCTAGGCATCCTGGAGGAGCTGCGGGACCAGCGTCTGGCTAAGGTGTTGACACTGCTGCAGGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CAA 72 bp ATCCTCAAGGGTGCCCCCTGTCTTTGTCGCCAGAAATaGTGCCTTCTTGCCCGGCCCGTCTCCCAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: ILKGAPCLCRQK*CLLARPVSQGS
Trigger: GCTGCCCTGGGAGACGGGCCGGGCAAGAAGGCACAATTTCTGGCGACAAAGACAGGGGGCACCCTTGAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp CTGCATATATATGAGGTGGGGCCTCGGAGCGACGCTTaGCCTTGTAGGCAGCCACCACAGCAGCTGTGTAGA +
Preference number: 6 (lower is better)
Translates to: LHIYEVGPRSDA*PCRQPPQQLCR
Trigger: TCTACACAGCTGCTGTGGTGGCTGCCTACAAGGGCAAGCGTCGCTCCGAGGCCCCACCTCATATATATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp CACCCATCAAGTAGGCAGCCTTGTCCGCACTCTCAGTaGCGTCTGCCTCAGCCTGTTCCTCTCTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: HPSSRQPCPHSQ*RLPQPVPLSAS
Trigger: AGAAGCAGAGAGAGGAACAGGCTGAGGCAGACGGCACTGAGAGTGCGGACAAGGCTGCCTACTTGATGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp TTCTCTTGCTCCAGGGAGCACTCCAGATCCTCCACTTaGTGTTCCAACCGGATCTTGGCCTTGGCCAGTGCG +
Preference number: 6 (lower is better)
Translates to: FSCSREHSRSST*CSNRILALASA
Trigger: CGCACTGGCCAAGGCCAAGATCCGGTTGGAACAGCAAGTGGAGGATCTGGAGTGCTCCCTGGAGCAAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CAA 72 bp TTCTTCCTGTCCTCTTCAGTCTGGTACACGAGCTCCTaGACCCGGCGCTCGTGTTTACGCACCCCCTTGAGG +
Preference number: 6 (lower is better)
Translates to: FFLSSSVWYTSS*TRRSCLRTPLR
Trigger: CCTCAAGGGGGTGCGTAAACACGAGCGCCGGGTCAAGGAGCTCGTGTACCAGACTGAAGAGGACAGGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 72 bp CAGGAGCAGCATGTCCTGCAGCTCCGGCTTCTTCCCTaGGAGGATCTGGTAGTAGACATGGTAACCACGCTC +
Preference number: 6 (lower is better)
Translates to: QEQHVLQLRLLP*EDLVVDMVTTL
Trigger: GAGCGTGGTTACCATGTCTACTACCAGATCCTCTCAGGGAAGAAGCCGGAGCTGCAGGACATGCTGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp TCTGGGATGGCACTGGGGTTCAGGATTCGGTACCGCTaGCTGAAGTCAGCATACAGCAGTCTGTTGGGGAAC +
Preference number: 6 (lower is better)
Translates to: SGMALGFRIRYR*LKSAYSSLLGN
Trigger: GTTCCCCAACAGACTGCTGTATGCTGACTTCAGGCAGCGGTACCGAATCCTGAACCCCAGTGCCATCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp TCCTCCAGTAAGTCGAAACGGGGTGGGTTCATGGGTTaGATCTCCGTTTCACGCACTGTCAGCACCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SSSKSKRGGFMG*ISVSRTVSTFW
Trigger: CCAGAAGGTGCTGACAGTGCGTGAAACGGAGATGCAACCCATGAACCCACCCCGTTTCGACTTACTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp CTCTCGGTTGCGGAGCATGTCGTTGTAGGCATTATCTaGCACTGCATATATATGAGGTGGGGCCTCGGAGCG +
Preference number: 6 (lower is better)
Translates to: LSVAEHVVVGII*HCIYMRWGLGA
Trigger: CGCTCCGAGGCCCCACCTCATATATATGCAGTGGCAGATAATGCCTACAACGACATGCTCCGCAACCGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 72 bp CCATGTCCTCCAGTAAGTCGAAACGGGGTGGGTTCATaGGTTGCATCTCCGTTTCACGCACTGTCAGCACCT +
Preference number: 6 (lower is better)
Translates to: PCPPVSRNGVGS*VASPFHALSAP
Trigger: AGGTGCTGACAGTGCGTGAAACGGAGATGCAACCCATGAACCCACCCCGTTTCGACTTACTGGAGGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 72 bp TCCAGTTCCTGGATGCTCTTCCCGCTGAGGCTGACCTaGTCTGTAAGGTCACTGATCTCCTCCTGCAGATTC +
Preference number: 6 (lower is better)
Translates to: SSSWMLFPLRLT*SVRSLISSCRF
Trigger: GAATCTGCAGGAGGAGATCAGTGACCTTACAGACCAGGTCAGCCTCAGCGGGAAGAGCATCCAGGAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp GTTGCGGAGCATGTCGTTGTAGGCATTATCTGCCACTaGATATATATGAGGTGGGGCCTCGGAGCGACGCTT +
Preference number: 6 (lower is better)
Translates to: VAEHVVVGIICH*IYMRWGLGATL
Trigger: AAGCGTCGCTCCGAGGCCCCACCTCATATATATGCAGTGGCAGATAATGCCTACAACGACATGCTCCGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 72 bp CGGTCCACCTCTGCCTTGACCTGGGACAACTCCAACTaGATCCGTAGAGTCTTTGTCTCTTCCAACTCCAGT +
Preference number: 6 (lower is better)
Translates to: RSTSALTWDNSN*IRRVFVSSNSS
Trigger: ACTGGAGTTGGAAGAGACAAAGACTCTACGGATCCAGTTGGAGTTGTCCCAGGTCAAGGCAGAGGTGGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 72 bp AGAACTGTCGAGGGAGCTTTGTGTCCAGGGTCTGATTaGTTCGAGAAACCAGCCATCGGAACAACCGGTCGT +
Preference number: 6 (lower is better)
Translates to: RTVEGALCPGSD*FEKPAIGTTGR
Trigger: ACGACCGGTTGTTCCGATGGCTGGTTTCTCGAATCAATCAGACCCTGGACACAAAGCTCCCTCGACAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 72 bp GGTTGCATCTCCGTTTCACGCACTGTCAGCACCTTCTaGTCTTTGGTCTCCACAGTGACTTTGCCTCCAGTA +
Preference number: 6 (lower is better)
Translates to: GCISVSRTVSTF*SLVSTVTLPPV
Trigger: TACTGGAGGCAAAGTCACTGTGGAGACCAAAGACCAGAAGGTGCTGACAGTGCGTGAAACGGAGATGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CAA 90 bp ATGGGTTGCATCTCCGTTTCACGCACTGTCAGCACCTTCTGGTCTTaGGTCTCCACAGTGACTTTGCCTCCAGTAGCTTCAGTCTTGACC +
Preference number: 6 (lower is better)
Translates to: MGCISVSRTVSTFWS*VSTVTLPPVASVLT
Trigger: GGTCAAGACTGAAGCTACTGGAGGCAAAGTCACTGTGGAGACCAAAGACCAGAAGGTGCTGACAGTGCGTGAAACGGAGATGCAACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CAA 90 bp CTCCGAATCCTTCTTCTTCAACTTCTCCTCCAACTGCTGCTTGTCTaGTGTTGTGTCTGTCACCGTCTCCTGCGTCAGCTTCAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LRILLLQLLLQLLLV*CCVCHRLLRQLQVS
Trigger: GGAGACTTGAAGCTGACGCAGGAGACGGTGACAGACACAACACAAGACAAGCAGCAGTTGGAGGAGAAGTTGAAGAAGAAGGATTCGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CAA 90 bp CTCAGCTCCGAATCCTTCTTCTTCAACTTCTCCTCCAACTGCTGCTaGTCTTGTGTTGTGTCTGTCACCGTCTCCTGCGTCAGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: LSSESFFFNFSSNCC*SCVVSVTVSCVSFK
Trigger: CTTGAAGCTGACGCAGGAGACGGTGACAGACACAACACAAGACAAGCAGCAGTTGGAGGAGAAGTTGAAGAAGAAGGATTCGGAGCTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 72 bp TTCTCATCCACACTGAAGCCCAGGATATCCATTGCATaGTCAGTGGCGATAAGTTCCTCGCCGTCATCCATG +
Preference number: 6 (lower is better)
Translates to: FSSTLKPRISIA*SVAISSSPSSM
Trigger: CATGGATGACGGCGAGGAACTTATCGCCACTGATCATGCAATGGATATCCTGGGCTTCAGTGTGGATGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 72 bp CCACGATCTTATAGCAGGCACACTTCTCATCCACACTaGAGCCCAGGATATCCATTGCATGATCAGTGGCGA +
Preference number: 6 (lower is better)
Translates to: PRSYSRHTSHPH*SPGYPLHDQWR
Trigger: TCGCCACTGATCATGCAATGGATATCCTGGGCTTCAGTGTGGATGAGAAGTGTGCCTGCTATAAGATCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 72 bp ATAAAGAACTGTCGAGGGAGCTTTGTGTCCAGGGTCTaGTTGATTCGAGAAACCAGCCATCGGAACAACCGG +
Preference number: 6 (lower is better)
Translates to: IKNCRGSFVSRV*LIRETSHRNNR
Trigger: CCGGTTGTTCCGATGGCTGGTTTCTCGAATCAATCAGACCCTGGACACAAAGCTCCCTCGACAGTTCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS TCA 72 bp GAGGTTCTCCTTGTGAAGCTGAGACACGGTCTGAAATaGTGCTGCTTTCTTGCGCTTCTCTTTCACCCCAGA +
Preference number: 6 (lower is better)
Translates to: EVLLVKLRHGLK*CCFLALLFHPR
Trigger: TCTGGGGTGAAAGAGAAGCGCAAGAAAGCAGCATCATTTCAGACCGTGTCTCAGCTTCACAAGGAGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp ACACTTCTCATCCACACTGAAGCCCAGGATATCCATTaGATGATCAGTGGCGATAAGTTCCTCGCCGTCATC +
Preference number: 6 (lower is better)
Translates to: TLLIHTEAQDIH*MISGDKFLAVI
Trigger: GATGACGGCGAGGAACTTATCGCCACTGATCATGCAATGGATATCCTGGGCTTCAGTGTGGATGAGAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp TCCGAATCCTTCTTCTTCAACTTCTCCTCCAACTGCTaGTTGTCTTGTGTTGTGTCTGTCACCGTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SESFFFNFSSNC*LSCVVSVTVSC
Trigger: GCAGGAGACGGTGACAGACACAACACAAGACAAGCAGCAGTTGGAGGAGAAGTTGAAGAAGAAGGATTCGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS GCA 72 bp AGCTCCGAATCCTTCTTCTTCAACTTCTCCTCCAACTaGTGCTTGTCTTGTGTTGTGTCTGTCACCGTCTCC +
Preference number: 6 (lower is better)
Translates to: SSESFFFNFSSN*CLSCVVSVTVS
Trigger: GGAGACGGTGACAGACACAACACAAGACAAGCAGCAGTTGGAGGAGAAGTTGAAGAAGAAGGATTCGGAGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CCA 72 bp CGGTGGAGCAAGAACCTGCATAGTTCTCATAGAGGGTaGCCAAGAGCCTATTCTGTGACTTTTGGAAGATGG +
Preference number: 6 (lower is better)
Translates to: RWSKNLHSSHRG*PRAYSVTFGRW
Trigger: CCATCTTCCAAAAGTCACAGAATAGGCTCTTGGCCACCCTCTATGAGAACTATGCAGGTTCTTGCTCCACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6
CDS CAA 72 bp CTTCTTCTTCAACTTCTCCTCCAACTGCTGCTTGTCTaGTGTTGTGTCTGTCACCGTCTCCTGCGTCAGCTT +
Preference number: 6 (lower is better)
Translates to: LLLQLLLQLLLV*CCVCHRLLRQL
Trigger: AAGCTGACGCAGGAGACGGTGACAGACACAACACAAGACAAGCAGCAGTTGGAGGAGAAGTTGAAGAAGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092995.6