Pregenerated sensors for MYH6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040752

Ensembl transcript IDs: ENSMUST00000081857.14, ENSMUST00000226297.2

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GTCTGCAGCTTGGCTCGCTGTGTGGTGAAGTCATTGAGGGAGCGCTaGGCTTCTTCCAGCTTCACGCGGTACTCATTGGCCTGGTCCTCC	+
Preference number: 5 (lower is better) Translates to: VCSLARCVVKSLRER*ASSSFTRYSLAWSS Trigger: GGAGGACCAGGCCAATGAGTACCGCGTGAAGCTGGAAGAAGCCCAGCGCTCCCTCAATGACTTCACCACACAGCGAGCCAAGCTGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081857.14 ENSMUST00000226297.2
CDS GCA 90 bp	GCCTCCTTTTCTTCCAGTTGCCTAGCCAACTCCCCGTTCTCTGTCTaGAGCTTGGCTCGCTGTGTGGTGAAGTCATTGAGGGAGCGCTGG	+
Preference number: 5 (lower is better) Translates to: ASFSSSCLANSPFSV*SLARCVVKSLRERW Trigger: CCAGCGCTCCCTCAATGACTTCACCACACAGCGAGCCAAGCTGCAGACAGAGAACGGGGAGTTGGCTAGGCAACTGGAAGAAAAGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081857.14 ENSMUST00000226297.2
CDS CAA 72 bp	GAGCGCTGGGCTTCTTCCAGCTTCACGCGGTACTCATaGGCCTGGTCCTCCAGTGTCCGGGACACTTTCTCC	+
Preference number: 6 (lower is better) Translates to: ERWASSSFTRYS*AWSSSVRDTFS Trigger: GGAGAAAGTGTCCCGGACACTGGAGGACCAGGCCAATGAGTACCGCGTGAAGCTGGAAGAAGCCCAGCGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081857.14 ENSMUST00000226297.2
CDS CCA 72 bp	AGCGCTGGGCTTCTTCCAGCTTCACGCGGTACTCATTaGCCTGGTCCTCCAGTGTCCGGGACACTTTCTCCA	+
Preference number: 6 (lower is better) Translates to: SAGLLPASRGTH*PGPPVSGTLSP Trigger: TGGAGAAAGTGTCCCGGACACTGGAGGACCAGGCCAATGAGTACCGCGTGAAGCTGGAAGAAGCCCAGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081857.14 ENSMUST00000226297.2
CDS CAA 72 bp	TCTGTCTGCAGCTTGGCTCGCTGTGTGGTGAAGTCATaGAGGGAGCGCTGGGCTTCTTCCAGCTTCACGCGG	+
Preference number: 6 (lower is better) Translates to: SVCSLARCVVKS*RERWASSSFTR Trigger: CCGCGTGAAGCTGGAAGAAGCCCAGCGCTCCCTCAATGACTTCACCACACAGCGAGCCAAGCTGCAGACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081857.14 ENSMUST00000226297.2
CDS CCA 72 bp	TTGGCTCGCTGTGTGGTGAAGTCATTGAGGGAGCGCTaGGCTTCTTCCAGCTTCACGCGGTACTCATTGGCC	+
Preference number: 6 (lower is better) Translates to: LARCVVKSLRER*ASSSFTRYSLA Trigger: GGCCAATGAGTACCGCGTGAAGCTGGAAGAAGCCCAGCGCTCCCTCAATGACTTCACCACACAGCGAGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081857.14 ENSMUST00000226297.2
CDS CAA 72 bp	ATAACCAGCAGGGCATCCCTGCGTTCCACTATCTTCTaGAACTCAATGCGCATGAGCTGCCCTCGGGCCTGG	+
Preference number: 6 (lower is better) Translates to: ITSRASLRSTIF*NSMRMSCPRAW Trigger: CCAGGCCCGAGGGCAGCTCATGCGCATTGAGTTCAAGAAGATAGTGGAACGCAGGGATGCCCTGCTGGTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081857.14 ENSMUST00000226297.2
CDS CAA 90 bp	TTTTCTTCCAGTTGCCTAGCCAACTCCCCGTTCTCTGTCTGCAGCTaGGCTCGCTGTGTGGTGAAGTCATTGAGGGAGCGCTGGGCTTCT	+
Preference number: 6 (lower is better) Translates to: FSSSCLANSPFSVCS*ARCVVKSLRERWAS Trigger: AGAAGCCCAGCGCTCCCTCAATGACTTCACCACACAGCGAGCCAAGCTGCAGACAGAGAACGGGGAGTTGGCTAGGCAACTGGAAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081857.14 ENSMUST00000226297.2
CDS GCA 72 bp	TCTTCCAGTTGCCTAGCCAACTCCCCGTTCTCTGTCTaGAGCTTGGCTCGCTGTGTGGTGAAGTCATTGAGG	+
Preference number: 6 (lower is better) Translates to: SSSCLANSPFSV*SLARCVVKSLR Trigger: CCTCAATGACTTCACCACACAGCGAGCCAAGCTGCAGACAGAGAACGGGGAGTTGGCTAGGCAACTGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081857.14 ENSMUST00000226297.2
CDS TCA 72 bp	GCCAGGGCCTGCTCGTCCTCAATTTTACTGTTCTGCTaGCTGATGTCGAACTCTTTCTTCTTGAGCTTTTCT	+
Preference number: 6 (lower is better) Translates to: ARACSSSILLFC*LMSNSFFLSFS Trigger: AGAAAAGCTCAAGAAGAAAGAGTTCGACATCAGTCAGCAGAACAGTAAAATTGAGGACGAGCAGGCCCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081857.14 ENSMUST00000226297.2

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