Pregenerated sensors for MYH4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057003Ensembl transcript IDs: ENSMUST00000018632.11, ENSMUST00000170942.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCCGAAGGTTCCTGATTaGCTCCGCAGCCTGGCGGTT | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWPKVPD*LRSLAV Trigger: AACCGCCAGGCTGCGGAGGCAATCAGGAACCTTCGG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGTGCGGGTGATGAGCTaGGCCAGCTTTTCATCTCGC | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWVRVMS*ASFSSR Trigger: GCGAGATGAAAAGCTGGCTCAGCTCATCACCCGCAC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTCATCAGGTACCCTCTaGACACGGCTTGAGTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWSSGTL*TRLECG Trigger: CCCGCACTCAAGCCGTGTGCAGAGGGTACCTGATGA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCCATCTGCTTCAGCTTaGACCTGGAGCTGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWPSASA*TWSCRS Trigger: TGACCTGCAGCTCCAGGTTCAAGCTGAAGCAGATGG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGGGTTGACAGTTCATTaGTCAGGCGCTGCTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWGLTVH*SGAAAP Trigger: AGGAGCAGCAGCGCCTGATCAATGAACTGTCAACCC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGCTTACGAAGACCCTTaGCGGCTTCGATGTTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWAYEDP*RLRCCA Trigger: AGCGCAACATCGAAGCCGTCAAGGGTCTTCGTAAGC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGAGTTGTACACCTGCTaGACCGTCTGGCCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWELYTC*TVWPLV Trigger: CACCAAAGGCCAGACGGTGCAGCAGGTGTACAACTC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCTGCATAGAGGATCCTaGTGGGGAACCCCTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWLHRGS*WGTPSY Trigger: GTAGGAAGGGGTTCCCCAGCAGGATCCTCTATGCAG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGTTGGTCCTCCAGGGTaGGGCACATCTTCTCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWVGPPG*GTSSQG Trigger: ACCTTGAGAAGATGTGCCGCACCCTGGAGGACCAAC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTCGCCTGACTCTGTGTaGAAGCGTGCCTTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWSPDSV*KRAFWV Trigger: AACCCAGAAGGCACGCTTGCACACAGAGTCAGGCGA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTCAACCATGGCCAGCTaGTCTTTCAGGTCGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWSTMAS*SFRSSW Trigger: CCAGGACGACCTGAAAGAGCAGCTGGCCATGGTTGA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTTCAACCCGGATTTCTaGTACAGCCCCACCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWFNPDF*YSPTTV Trigger: GACCGTGGTGGGGCTGTACCAGAAATCCGGGTTGAA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGTGCGTTCTTGGCCTTaGACTCTTCCTCTAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWVRSWP*TLPLAA Trigger: GGCAGCTAGAGGAAGAGTCCAAGGCCAAGAACGCAC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTCCAGCTCATGGATGTaGTTCCCTCCCTCAGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWSSSWM*FPPSAI Trigger: GATTGCTGAGGGAGGGAAGCACATCCATGAGCTGGA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTTCACTCTGCGCTCGTaGTTACGAAGACCCTTGACG | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWFTLRS*LRRPLT Trigger: CGTCAAGGGTCTTCGTAAGCACGAGCGCAGAGTGAA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTTGTCCACCAAGTCCTaGAGCCTCAGCACGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWLSTKS*SLSTFL Trigger: CAAGAACGTGCTGAGGCTGCAGGACTTGGTGGACAA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCAACAGCAGTGTCTGTaGCCATCAGCTCTTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWQQQCL*PSALPG Trigger: ACCAGGAAGAGCTGATGGCCACAGACACTGCTGTTG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGAGGCATCTGACAAAGTaGGGGTGGGTGCTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWRHLTK*GWVLFK Trigger: CTTGAAGAGCACCCACCCCCACTTTGTCAGATGCCT...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCATAGAGGATCCTGCTaGGGAACCCCTTCCTACAGA | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWHRGSC*GTPSYR Trigger: TCTGTAGGAAGGGGTTCCCCAGCAGGATCCTCTATG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGTAATCAGGATGGACTaGTTCTCACGATCCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWVIRMD*FSRSVS Trigger: GCTGACGGATCGTGAGAATCAGTCCATCCTGATTAC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTTACACCTGAGCTGGTaGAAGACCAGTTCATGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWLHLSW*KTSSCS Trigger: GGAGCATGAACTGGTCTTGCACCAGCTCAGGTGTAA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGACATCTTCTCATACATaGACTTGGCCAGGGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWTSSHT*TWPGHP Trigger: TGGGTGCCCTGGCCAAGTCCATGTATGAGAAGATGT...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTCTCAAGGTTCCCCTTaGCTTTGGAGACTGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWSQGSP*LWRLSP Trigger: TGGAGACAGTCTCCAAAGCCAAGGGGAACCTTGAGA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTTCATGGAGAAGACTTaGTCATCCTTGACGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWFMEKT*SSLTVT Trigger: GGTCACCGTCAAGGATGATCAAGTCTTCTCCATGAA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGCTGCTCCAAGGTGTTaGAGTCAAAGATCTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWAAPRC*SQRSQS Trigger: GCTTTGAGATCTTTGACTTCAACACCTTGGAGCAGC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCTTTTCCTGTTCCAGTaGTCCTTCAAGGTCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWLFLFQ*SFKVIH Trigger: GTGGATGACCTTGAAGGATCACTGGAACAGGAAAAG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTTGCCTCGGGAAAGCTaGGAAACCATAGCGTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWLPRES*ETIASF Trigger: AAAAGACGCTATGGTTTCTCAGCTTTCCCGAGGCAA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGGCCACCTTTTCATCTaGACTGAATCCCAGGATATC | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWGHLFI*TESQDI Trigger: GATATCCTGGGATTCAGTGCAGATGAAAAGGTGGCC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTCAGAGATCTCCTGCTaGAGGTTCTTGTTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWSEISC*RFLFSL Trigger: GAGAGAGAACAAGAACCTGCAGCAGGAGATCTCTGA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGAGGTCAGAGATCTCCTaGTGCAGGTTCTTGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWRSEIS*CRFLFS Trigger: AGAGAACAAGAACCTGCAGCAGGAGATCTCTGACCT...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCCTTTTCATCTGCACTaGATCCCAGGATATCAACAG | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWPFHLH*IPGYQQ Trigger: CTGTTGATATCCTGGGATTCAGTGCAGATGAAAAGG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCTTTGTATCTCTGCTTaGAGTCTGCATAGAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWLCISA*SLHRGS Trigger: GGATCCTCTATGCAGACTTCAAGCAGAGATACAAAG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCTCAGGGATGGCACTTaGATTCAGGACTTTGTATCT | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWLRDGT*IQDFVS Trigger: AGATACAAAGTCCTGAATGCAAGTGCCATCCCTGAG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGACTGAATGCAGAAGATaGACTCTCTCCTCTCCATCA | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWTECRR*TLSSPS Trigger: TGATGGAGAGGAGAGAGTCCATCTTCTGCATTCAGT...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGATCTCAGATTTCACCTaGTTCAACTCCAGCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWISDFT*FNSSWM Trigger: CATCCAGCTGGAGTTGAACCAGGTGAAATCTGAGAT...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTATTTAAATTCTCCCTaGAGAGAGCTGACACGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWYLNSP*RELTRS Trigger: AGACCGTGTCAGCTCTCTTCAGGGAGAATTTAAATA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGCCTGCTCTTCCCTTTaGTTTTGCTTGAATTTCATG | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWACSSL*FCLNFM Trigger: CATGAAATTCAAGCAAAAGCAAAGGGAAGAGCAGGC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCAAACTCTTTCTTTTTaGGTTTCTCATCGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWQTLSF*VSHRAA Trigger: AGCAGCTCGATGAGAAACTCAAAAAGAAAGAGTTTG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGATCAATTTGCTTCTTaGTTTTCTCCAGCTCATGGA | + |
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Preference number: 4 (lower is better) Translates to: TKNVTFCDFSCHLSTERWDQFAS*FSPAHG Trigger: TCCATGAGCTGGAGAAAATCAAGAAGCAAATTGATC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS CCA 90 bp | CTGAGAGCATCGTCCAGGTGCAGCTGTGTGTCCTTCAGCATTCCCTaGGTGTTCCGAAGGTTCCTGATTGCCTCCGCAGCCTGGCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: LRASSRCSCVSFSIP*VFRRFLIASAAWRL Trigger: CAACCGCCAGGCTGCGGAGGCAATCAGGAACCTTCGGAACACCCAGGGAATGCTGAAGGACACACAGCTGCACCTGGACGATGCTCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGAGGGCACCCACGGAGTaGTACACCTGCTGCACCGTC | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWRAPTE*YTCCTV Trigger: GACGGTGCAGCAGGTGTACAACTCCGTGGGTGCCCT...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCCCTCTGCACACGGCTaGAGTGCGGGTGATGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWPSAHG*SAGDEL Trigger: CAGCTCATCACCCGCACTCAAGCCGTGTGCAGAGGG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGAGCCTCAGCACGTTCTaGCGGTCCTCCTCGGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWSLSTF*RSSSVW Trigger: CCAGACCGAGGAGGACCGCAAGAACGTGCTGAGGCT...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTCTGCAGAGGCCAGTTaGCCTGTGGCACCGAAATGG | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWSAEAS*PVAPKW Trigger: CCATTTCGGTGCCACAGGCAAACTGGCCTCTGCAGA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGCCATCTGCTTCAGCTaGAACCTGGAGCTGCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWAICFS*NLELQV Trigger: GACCTGCAGCTCCAGGTTCAAGCTGAAGCAGATGGC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCTTCACTTCACTCAGTaGGTCCTCCAGGGTGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWLHFTQ*VLQGAA Trigger: TGCCGCACCCTGGAGGACCAACTGAGTGAAGTGAAG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCTCTCGGTCAGCTCTTaGATTTTGGCCTCCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWLSVSS*ILASSW Trigger: CCAGCTGGAGGCCAAAATCAAAGAGCTGACCGAGAG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTGGGTTGACAGTTCATaGATCAGGCGCTGCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWWVDSS*IRRCCS Trigger: GGAGCAGCAGCGCCTGATCAATGAACTGTCAACCCA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGAGTGCGTTCTTGGCCTaGGACTCTTCCTCTAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWSAFLA*DSSSSC Trigger: GCAGCTAGAGGAAGAGTCCAAGGCCAAGAACGCACT...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGCCTCCTCCTTCTTCTaGTCCCCAGTGACTGCAATT | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWASSFF*SPVTAI Trigger: AATTGCAGTCACTGGGGACAAGAAGAAGGAGGAGGC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTTCTCAAGGTTCCCCTaGGCTTTGGAGACTGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWFSRFP*ALETVS Trigger: GGAGACAGTCTCCAAAGCCAAGGGGAACCTTGAGAA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCAGGTTGACATTGGATaGTTCCTCAGCCTCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWQVDIG*FLSLLS Trigger: GCTGAGGAGGCTGAGGAACAATCCAATGTCAACCTG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCATTCTGCCAGGACCTaGTCAAAGTTCCTCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWHSART*SKFLCF Trigger: GAAGCAGAGGAACTTTGACAAGGTCCTGGCAGAATG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTCCTGCTGCAGGTTCTaGTTCTCTCTCTTTAACGTC | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWSCCRF*FSLFNV Trigger: GACGTTAAAGAGAGAGAACAAGAACCTGCAGCAGGA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGACTTTAGTCTGTAGTTaGTCCACCAAGTCCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWTLVCS*STKSCS Trigger: GCTGCAGGACTTGGTGGACAAACTACAGACTAAAGT...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGTGGATCTTACGGAACTaGGCCAGGTTGACATTGGAT | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWWILRN*ARLTLD Trigger: ATCCAATGTCAACCTGGCCAAGTTCCGTAAGATCCA...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGGGAGTCTTAGTTTCATaGGGAATGAGGCATCTGACA | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWGVLVS*GMRHLT Trigger: TGTCAGATGCCTCATTCCCAATGAAACTAAGACTCC...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCTTGCATTCAGGACTTaGTATCTCTGCTTGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWLAFRT*YLCLKS Trigger: AGACTTCAAGCAGAGATACAAAGTCCTGAATGCAAG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGAACGTCACATTTTGTGATTTCTCCTGTCACCTCTCAACAGAAAGATGGCTTTTCCTGATCAATTaGCTTCTTGATTTTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: TKNVTFCDFSCHLSTERWLFLIN*LLDFLQ Trigger: CTGGAGAAAATCAAGAAGCAAATTGATCAGGAAAAG...CCATCTTTCTGTTGAGAGGTGACAGGAGAAATCACAAAATGTGACGTTCTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS CCA 72 bp | TCGTCCAGGTGCAGCTGTGTGTCCTTCAGCATTCCCTaGGTGTTCCGAAGGTTCCTGATTGCCTCCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSRCSCVSFSIP*VFRRFLIASAA Trigger: GGCTGCGGAGGCAATCAGGAACCTTCGGAACACCCAGGGAATGCTGAAGGACACACAGCTGCACCTGGACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS TCA 72 bp | TCAGCACGTTCTTGCGGTCCTCCTCGGTCTGGTAGGTaGGTTCCTTCACTCTGCGCTCGTGCTTACGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: SARSCGPPRSGR*VPSLCARAYED Trigger: GTCTTCGTAAGCACGAGCGCAGAGTGAAGGAACTCACCTACCAGACCGAGGAGGACCGCAAGAACGTGCTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS TCA 72 bp | GGATGGCACTTGCATTCAGGACTTTGTATCTCTGCTTaGAGTCTGCATAGAGGATCCTGCTGGGGAACCCCT | + |
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Preference number: 6 (lower is better) Translates to: GWHLHSGLCISA*SLHRGSCWGTP Trigger: AGGGGTTCCCCAGCAGGATCCTCTATGCAGACTTCAAGCAGAGATACAAAGTCCTGAATGCAAGTGCCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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| CDS CCA 72 bp | CATCGAGCTGCTGTTTATCGTTTTCTATGTCCATTGTaGACTCTTGGGCCAGTTTCAGGTCCCCCTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: HRAAVYRFLCPL*TLGPVSGPPPV Trigger: AACTGGAGGGGGACCTGAAACTGGCCCAAGAGTCCACAATGGACATAGAAAACGATAAACAGCAGCTCGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018632.11 ENSMUST00000170942.2 |
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