RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYH3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020908

Ensembl transcript IDs: ENSMUST00000007301.14, ENSMUST00000108689.8, ENSMUST00000165221.2

Found 351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCGATCTGGGTGGAGGTaGCACCGCCCGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRRSGWR*HRPPPP
Trigger: TGGAGGAGGCGGGCGGTGTCACCTCCACCCAGATCG...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACGATCTGGGTGGAGGTaGCACCGCCCGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGRSGWR*HRPPPP
Trigger: TGGAGGAGGCGGGCGGTGTCACCTCCACCCAGATCG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGCGTCCAGGGCGCCTTaGATGGTCTCCACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRASRAP*MVSTVL
Trigger: GAGGACAGTGGAGACCATGCAAGGCGCCCTGGACGC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGTGCTTGATGGTCTCTaGGGCCTGGCGGTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRVLDGL*GLAVGV
Trigger: CACGCCAACCGCCAGGCCGCAGAGACCATCAAGCAC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCCTCCGCATCGTCGATaGTGGCCACCAGGATTTCGC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRPPHRR*WPPGFR
Trigger: GCGAAATCCTGGTGGCCAGCATCGACGATGCGGAGG...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGCGTCCAGGGCGCCTTaGATGGTCTCCACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSASRAP*MVSTVL
Trigger: GAGGACAGTGGAGACCATGCAAGGCGCCCTGGACGC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGCGTCCAGGGCGCCTTaGATGGTCTCCACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGASRAP*MVSTVL
Trigger: GAGGACAGTGGAGACCATGCAAGGCGCCCTGGACGC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGTGCTTGATGGTCTCTaGGGCCTGGCGGTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGVLDGL*GLAVGV
Trigger: CACGCCAACCGCCAGGCCGCAGAGACCATCAAGCAC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGCTTGATGGTCTCTaGGGCCTGGCGGTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEVLDGL*GLAVGV
Trigger: CACGCCAACCGCCAGGCCGCAGAGACCATCAAGCAC...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGCCTCCAGCTCGGCTTaGCTCTCCTCACACTTCGTC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRASSSA*LSSHFV
Trigger: GACGAAGTGTGAGGAGAGCCAAGCCGAGCTGGAGGC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCCTCCGCATCGTCGATaGTGGCCACCAGGATTTCGC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEPPHRR*WPPGFR
Trigger: GCGAAATCCTGGTGGCCAGCATCGACGATGCGGAGG...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCCTCCAGCTCGCGTaGATAGTCGCTGCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGLLQLA*IVAALL
Trigger: AAGCAGCGCAGCGACTATGCACGCGAGCTGGAGGAG...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGGATTCCTTGAGAGCTaGCTCCAGCTCGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRGFLES*LQLGLA
Trigger: AGCCAAGCCGAGCTGGAGGCAGCTCTCAAGGAATCC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCTCAAGAGCTGCCTCTaGTTCCTCCAGCGCCATCTG +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRLKSCL*FLQRHL
Trigger: CAGATGGCGCTGGAGGAAGCAGAGGCAGCTCTTGAG...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCTCCTCTGCATTCCTTaGGTCCCTGCAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRLLCIP*VPAGIL
Trigger: GAGGATGCCTGCAGGGACGCAAGGAATGCAGAGGAG...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCCGCATCGTCGATGCTaGCCACCAGGATTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGPHRRC*PPGFRP
Trigger: AGGGCGAAATCCTGGTGGCCAGCATCGACGATGCGG...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCCGCATCGTCGATGCTaGCCACCAGGATTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSPHRRC*PPGFRP
Trigger: AGGGCGAAATCCTGGTGGCCAGCATCGACGATGCGG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGCCGGGACTTCTGTGTaGTCAGCTCACTTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRAGTSV*SAHLGS
Trigger: GGAGCCTAAGTGAGCTGACCACACAGAAGTCCCGGC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGCCTCCAGCTCGGCTTaGCTCTCCTCACACTTCGTC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGASSSA*LSSHFV
Trigger: GACGAAGTGTGAGGAGAGCCAAGCCGAGCTGGAGGC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCCAGGGCGCCTTGCATaGTCTCCACTGTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEPGRLA*SPLSSG
Trigger: ACCAGAGGACAGTGGAGACCATGCAAGGCGCCCTGG...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCCAGGGCGCCTTGCATaGTCTCCACTGTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSPGRLA*SPLSSG
Trigger: ACCAGAGGACAGTGGAGACCATGCAAGGCGCCCTGG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTCCTTCAGCTGTCCCTaGACGCTCCGGAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSFSCP*TLRRCL
Trigger: CAAGCACCTCCGGAGCGTCCAGGGACAGCTGAAGGA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTCCTTCAGCTGTCCCTaGACGCTCCGGAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGSFSCP*TLRRCL
Trigger: CAAGCACCTCCGGAGCGTCCAGGGACAGCTGAAGGA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCATCCAGGTGCAGCTaGGTGTCCTTCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRSSRCS*VSFSCP
Trigger: GGGACAGCTGAAGGACACCCAGCTGCACCTGGATGA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCAGCCTGCAGGAGGTTaGCTCTGCGTTCCACGATGG +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSQPAGG*LCVPRW
Trigger: CCATCGTGGAACGCAGAGCCAACCTCCTGCAGGCTG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCAGCCTGCAGGAGGTTaGCTCTGCGTTCCACGATGG +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGQPAGG*LCVPRW
Trigger: CCATCGTGGAACGCAGAGCCAACCTCCTGCAGGCTG...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCCTCCACCTCACTCTaGAGCTGCGTGAGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRSSTSL*SCVRSV
Trigger: GACTGACCTCACGCAGCTCCAGAGTGAGGTGGAGGA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGACGTGTATCGGTCCTTaGGGTTGTACAGCACAGCGG +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRTCIGP*GCTAQR
Trigger: CCGCTGTGCTGTACAACCTCAAGGACCGATACACGT...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGCGTTCACAGCATGGTaGACCTGGTCCACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSAFTAW*TWSTVC
Trigger: GCAGACTGTGGACCAGGTTCACCATGCTGTGAACGC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCGTTCACAGCATGGTaGACCTGGTCCACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEAFTAW*TWSTVC
Trigger: GCAGACTGTGGACCAGGTTCACCATGCTGTGAACGC...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCATGGCGGCGTCAGTaGTGGCCTTTTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRSWRRQ*WPFWPS
Trigger: AGAAGGCCAAAAAGGCCATCACTGACGCCGCCATGA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACTCCTCCAGCTCGCGTaGATAGTCGCTGCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGLLQLA*IVAALL
Trigger: AAGCAGCGCAGCGACTATGCACGCGAGCTGGAGGAG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGAGAGCGTCATCCAGGTaGAGCTGGGTGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQERASSR*SWVSFS
Trigger: GCTGAAGGACACCCAGCTGCACCTGGATGACGCTCT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTAGAGCGTCATCCAGGTaGAGCTGGGTGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGRASSR*SWVSFS
Trigger: GCTGAAGGACACCCAGCTGCACCTGGATGACGCTCT...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCTCCTCTGCATTCCTTaGGTCCCTGCAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSLLCIP*VPAGIL
Trigger: GAGGATGCCTGCAGGGACGCAAGGAATGCAGAGGAG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCTCCTCTGCATTCCTTaGGTCCCTGCAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQELLCIP*VPAGIL
Trigger: GAGGATGCCTGCAGGGACGCAAGGAATGCAGAGGAG...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGTGTTCCATGGCCCCTaGGGTCTTGGTTTCGTTGGG +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSVFHGP*GLGFVG
Trigger: CCCAACGAAACCAAGACCCCAGGGGCCATGGAACAC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGCCGGGACTTCTGTGTaGTCAGCTCACTTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGAGTSV*SAHLGS
Trigger: GGAGCCTAAGTGAGCTGACCACACAGAAGTCCCGGC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGAGCTCCTCCGTGCGCTaGATGGCATCCGTTTCATAC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRSSSVR*MASVSY
Trigger: GTATGAAACGGATGCCATCCAGCGCACGGAGGAGCT...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTCCTCCAGCGCCATCTaGATGTCAGCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSSSAI*MSAFSS
Trigger: GCTGGAGAAGGCTGACATCCAGATGGCGCTGGAGGA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGATGAGGCTTGTGTTCTaGGTGTGCAGCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRMRLVF*VCSSWT
Trigger: GGTCCAGCTGCTGCACACCCAGAACACAAGCCTCAT...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTCCTCCACCTCACTCTaGAGCTGCGTGAGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSSTSL*SCVRSV
Trigger: GACTGACCTCACGCAGCTCCAGAGTGAGGTGGAGGA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCCTCCAGTTGCCTCTTaGGCTCCTCTATCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGPPVAS*APLSVG
Trigger: CCCAACAGATAGAGGAGCTCAAGAGGCAACTGGAGG...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCCTCCAGTTGCCTCTTaGGCTCCTCTATCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEPPVAS*APLSVG
Trigger: CCCAACAGATAGAGGAGCTCAAGAGGCAACTGGAGG...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCACTCTGGAGCTGCGTaGGGTCAGTCTCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEHSGAA*GQSPTS
Trigger: AGAAGTTGGAGACTGACCTCACGCAGCTCCAGAGTG...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCACTCTGGAGCTGCGTaGGGTCAGTCTCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSHSGAA*GQSPTS
Trigger: AGAAGTTGGAGACTGACCTCACGCAGCTCCAGAGTG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTCATGGCGGCGTCAGTaGTGGCCTTTTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGSWRRQ*WPFWPS
Trigger: AGAAGGCCAAAAAGGCCATCACTGACGCCGCCATGA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTACACCTGAGCTGGTaGAGGACAAGGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRLHLSW*RTRLCS
Trigger: GGAACACAGCCTTGTCCTGCACCAGCTCAGGTGTAA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACGCGTGCATAGTCGCTaGGCTGCTTCTCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGRVHSR*AASLSW
Trigger: CCAAGACAGAGAAGCAGCGCAGCGACTATGCACGCG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATTCGTGCTCAAGAGCTaGCTCTGCTTCCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGFVLKS*LCFLQR
Trigger: GCGCTGGAGGAAGCAGAGGCAGCTCTTGAGCACGAA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCTTGTGTTCTGGGTGTaGAGCAGCTGGACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQELVFWV*SSWTLS
Trigger: TGAGAGGGTCCAGCTGCTGCACACCCAGAACACAAG...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGCATACACGTCCTCTaGCTTAACCACCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEGIHVL*LNHQGP
Trigger: AGGACCCTGGTGGTTAAGCCAGAGGACGTGTATGCC...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGGCATACACGTCCTCTaGCTTAACCACCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSGIHVL*LNHQGP
Trigger: AGGACCCTGGTGGTTAAGCCAGAGGACGTGTATGCC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGTGGAGTCCTTCTTCTTaGCAAGGTCCCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEWSPSS*QGPQWL
Trigger: CAGCCACTGGGGACCTTGCCAAGAAGAAGGACTCCA...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTGGAGTCCTTCTTCTTaGCAAGGTCCCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGWSPSS*QGPQWL
Trigger: CAGCCACTGGGGACCTTGCCAAGAAGAAGGACTCCA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTGGAGTCCTTCTTCTTaGCAAGGTCCCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSWSPSS*QGPQWL
Trigger: CAGCCACTGGGGACCTTGCCAAGAAGAAGGACTCCA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCTGTTGGAGGACTTCTaGTACAGTCCCACCACGGTC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQELLEDF*YSPTTV
Trigger: GACCGTGGTGGGACTGTACCAGAAGTCCTCCAACAG...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCTGTTGGAGGACTTCTaGTACAGTCCCACCACGGTC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSLLEDF*YSPTTV
Trigger: GACCGTGGTGGGACTGTACCAGAAGTCCTCCAACAG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGTGCCAGGAGTCTGTTaGAGGACTTCTGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRVPGVC*RTSGTV
Trigger: GACTGTACCAGAAGTCCTCCAACAGACTCCTGGCAC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGTGTTCCATGGCCCCTaGGGTCTTGGTTTCGTTGGG +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGVFHGP*GLGFVG
Trigger: CCCAACGAAACCAAGACCCCAGGGGCCATGGAACAC...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCAAGGCTGTGTTCCATaGCCCCTGGGGTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSQGCVP*PLGSWF
Trigger: AAACCAAGACCCCAGGGGCCATGGAACACAGCCTTG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCTTCTGGGATGGCACTaGCGTTCAGCACTCGGTATC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQELLGWH*RSALGI
Trigger: GATACCGAGTGCTGAACGCCAGTGCCATCCCAGAAG...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTAGCTCCTCCGTGCGCTaGATGGCATCCGTTTCATAC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGSSSVR*MASVSY
Trigger: GTATGAAACGGATGCCATCCAGCGCACGGAGGAGCT...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGAGCTCCTCCGTGCGCTaGATGGCATCCGTTTCATAC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQESSSVR*MASVSY
Trigger: GTATGAAACGGATGCCATCCAGCGCACGGAGGAGCT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGTCTTCTTCAGGCGGATaGCCTCATTCCTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQESSSGG*PHSCCA
Trigger: TGCGCAGCAGGAATGAGGCCATCCGCCTGAAGAAGA...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATCATCCAGGTGCAGCTaGGTGTCCTTCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSSRCS*VSFSCP
Trigger: GGGACAGCTGAAGGACACCCAGCTGCACCTGGATGA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTATGAGGCTTGTGTTCTaGGTGTGCAGCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSMRLVF*VCSSWT
Trigger: GGTCCAGCTGCTGCACACCCAGAACACAAGCCTCAT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAACGTGTATCGGTCCTTaGGGTTGTACAGCACAGCGG +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGTCIGP*GCTAQR
Trigger: CCGCTGTGCTGTACAACCTCAAGGACCGATACACGT...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCCTGTACCAAAGTaGCGAGCTTCTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRSPVPK*RASPLA
Trigger: AGCTAGAGGAGAAGCTCGTCACTTTGGTACAGGAGA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCTGGCCTCACTTAACTaGTCCTCTAGAGTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSLASLN*SSRVRQ
Trigger: CTGCCGAACTCTAGAGGATCAGTTAAGTGAGGCCAG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGTCCTTTTCTTCTAGTTaGCGACTCAGCTCACCCGCC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQESFSSS*RLSSPA
Trigger: GGCGGGTGAGCTGAGTCGTCAACTAGAAGAAAAGGA...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTCCTTTTCTTCTAGTTaGCGACTCAGCTCACCCGCC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGSFSSS*RLSSPA
Trigger: GGCGGGTGAGCTGAGTCGTCAACTAGAAGAAAAGGA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATCATGGCGGCGTCAGTaGTGGCCTTTTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSWRRQ*WPFWPS
Trigger: AGAAGGCCAAAAAGGCCATCACTGACGCCGCCATGA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCTTGCGGAGGAAAGGTaGAGCTATGCCAAACACTTC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRLAEER*SYAKHF
Trigger: GAAGTGTTTGGCATAGCTGCACCTTTCCTCCGCAAG...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTTACACCTGAGCTGGTaGAGGACAAGGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGLHLSW*RTRLCS
Trigger: GGAACACAGCCTTGTCCTGCACCAGCTCAGGTGTAA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCCAGATCATCCACTTaGTGCTCCAGCTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRSRSST*CSSLLL
Trigger: CAAGAGCAAGCTGGAGCAGCAAGTGGATGATCTGGA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCACTTAGGCTCCTCTaGATCTCCTCATTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRSLRLL*ISSFLP
Trigger: GGGCAAGAATGAGGAGATGCAGAGGAGCCTAAGTGA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACTTGTGTTCTGGGTGTaGAGCAGCTGGACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGLVFWV*SSWTLS
Trigger: TGAGAGGGTCCAGCTGCTGCACACCCAGAACACAAG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGCCTCCTCTAGCTCATaGTGGGCTTTCCTGAACTTG +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGASSSS*WAFLNL
Trigger: CAAGTTCAGGAAAGCCCAGCATGAGCTAGAGGAGGC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGCCTCCTCTAGCTCATaGTGGGCTTTCCTGAACTTG +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSASSSS*WAFLNL
Trigger: CAAGTTCAGGAAAGCCCAGCATGAGCTAGAGGAGGC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTACTTGGGTGGGTTCATaGCATACACGTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGTWVGS*HTRPLA
Trigger: AGCCAGAGGACGTGTATGCCATGAACCCACCCAAGT...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGACTTGGGTGGGTTCATaGCATACACGTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQETWVGS*HTRPLA
Trigger: AGCCAGAGGACGTGTATGCCATGAACCCACCCAAGT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACAAGGCTGTGTTCCATaGCCCCTGGGGTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGQGCVP*PLGSWF
Trigger: AAACCAAGACCCCAGGGGCCATGGAACACAGCCTTG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACTTCTGGGATGGCACTaGCGTTCAGCACTCGGTATC +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGLLGWH*RSALGI
Trigger: GATACCGAGTGCTGAACGCCAGTGCCATCCCAGAAG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGAATGAACTGGCCTTCTaGGATGGCACTGGCGTTCAG +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQENELAF*DGTGVQ
Trigger: CTGAACGCCAGTGCCATCCCAGAAGGCCAGTTCATT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTAATGAACTGGCCTTCTaGGATGGCACTGGCGTTCAG +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSNELAF*DGTGVQ
Trigger: CTGAACGCCAGTGCCATCCCAGAAGGCCAGTTCATT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACTGTCTTGGCCCGGGTaGCCCTCTCTGCCTCTATCT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPALSWPG*PSLPLS
Trigger: AGATAGAGGCAGAGAGGGCCACCCGGGCCAAGACAG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGGATCCGGAGAATCTTaGCTTCTTCGTGCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRGSGES*LLRAQE
Trigger: CTCTTGAGCACGAAGAAGCCAAGATTCTCCGGATCC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGGCGCCTTGCATaGTCTCCACTGTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAPGRLA*SPLSSG
Trigger: ACCAGAGGACAGTGGAGACCATGCAAGGCGCCCTGG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATCTTCTTCAGGCGGATaGCCTCATTCCTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSSSGG*PHSCCA
Trigger: TGCGCAGCAGGAATGAGGCCATCCGCCTGAAGAAGA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAATGAGGCTTGTGTTCTaGGTGTGCAGCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGMRLVF*VCSSWT
Trigger: GGTCCAGCTGCTGCACACCCAGAACACAAGCCTCAT...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGAAAGCACAAGGCCTTaGGGAGGTCTGAGGAATTCA +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEESTRP*GGLRNS
Trigger: TGAATTCCTCAGACCTCCTCAAGGCCTTGTGCTTTC...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTCTCCTGTACCAAAGTaGCGAGCTTCTCCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSPVPK*RASPLA
Trigger: AGCTAGAGGAGAAGCTCGTCACTTTGGTACAGGAGA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCTGGAACTTGGCTTTaGTCAGCTGGTCGCATCGTT +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGAGTWL*SAGRIV
Trigger: AACGATGCGACCAGCTGATCAAAGCCAAGTTCCAGC...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGAGCCTGTAGCTCCTTaGTTTTCTTCTGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRREPVAP*FSSEAG
Trigger: TCCAGCTTCAGAAGAAAATCAAGGAGCTACAGGCTC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACTGGCCTCACTTAACTaGTCCTCTAGAGTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGLASLN*SSRVRQ
Trigger: CTGCCGAACTCTAGAGGATCAGTTAAGTGAGGCCAG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCTTGCGGAGGAAAGGTaGAGCTATGCCAAACACTTC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSLAEER*SYAKHF
Trigger: GAAGTGTTTGGCATAGCTGCACCTTTCCTCCGCAAG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGGCATAGAGATGTaGCAGGAGTCTGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGGGIEM*QESVGG
Trigger: TCCTCCAACAGACTCCTGGCACATCTCTATGCCACC...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGATGGACTCCCTCCTCTaGATCATCTTCTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRMDSLL*IIFWNS
Trigger: GGAATTCCAGAAGATGATGCAGAGGAGGGAGTCCAT...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGAGTTTCATCCAGGCCTaGCAGTTCTTCGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRSFIQA*QFFGKV
Trigger: AACCTTACCGAAGAACTGGCAGGCCTGGATGAAACT...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTCCAGATCATCCACTTaGTGCTCCAGCTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSRSST*CSSLLL
Trigger: CAAGAGCAAGCTGGAGCAGCAAGTGGATGATCTGGA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTCACTTAGGCTCCTCTaGATCTCCTCATTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSLRLL*ISSFLP
Trigger: GGGCAAGAATGAGGAGATGCAGAGGAGCCTAAGTGA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGGATTCCTTGAGAGCTaGCTCCAGCTCGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAGFLES*LQLGLA
Trigger: AGCCAAGCCGAGCTGGAGGCAGCTCTCAAGGAATCC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGATCTTGGCTTCTTCGTaGTCAAGAGCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEILASS*SRAASA
Trigger: AGCAGAGGCAGCTCTTGAGCACGAAGAAGCCAAGAT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTATCTTGGCTTCTTCGTaGTCAAGAGCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSILASS*SRAASA
Trigger: AGCAGAGGCAGCTCTTGAGCACGAAGAAGCCAAGAT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTCTGTGTTCCTCTTCTaGTCCCCTTCCAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGSVFLF*SPSSSN
Trigger: GTTTGAGCTGGAAGGGGAGCAGAAGAGGAACACAGA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGACTGGATGCAGAAGATaGACTCCCTCCTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQETGCRR*TPSSAS
Trigger: TGATGCAGAGGAGGGAGTCCATCTTCTGCATCCAGT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTACTGGATGCAGAAGATaGACTCCCTCCTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGTGCRR*TPSSAS
Trigger: TGATGCAGAGGAGGGAGTCCATCTTCTGCATCCAGT...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTACTGGATGCAGAAGATaGACTCCCTCCTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSTGCRR*TPSSAS
Trigger: TGATGCAGAGGAGGGAGTCCATCTTCTGCATCCAGT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGAGATCTTCTCCAGATTaGCCTTGGATTTGGACACGC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRRSSPD*PWIWTR
Trigger: GCGTGTCCAAATCCAAGGCCAATCTGGAGAAGATCT...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCCTCATTCTTGCCCCTaGCCTCACTTAACTGATCCT +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGPHSCP*PHLTDP
Trigger: AGGATCAGTTAAGTGAGGCCAGGGGCAAGAATGAGG...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGAGCTCCTCTATCTGTTaGGTAAAGGCCTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQESSSIC*VKACLL
Trigger: GAGCAAGCAGGCCTTTACCCAACAGATAGAGGAGCT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCATCCTCCAGCGCCATCTaGATGTCAGCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPASSSAI*MSAFSS
Trigger: GCTGGAGAAGGCTGACATCCAGATGGCGCTGGAGGA...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGTTCAAGTTTTCCCTaGACAGTGCAGAGACGGTTT +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRCSSFP*TVQRRF
Trigger: AAACCGTCTCTGCACTGTTCAGGGAAAACTTGAACA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCTTGCTCAGAGAATTaGCCTTGTCTTCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEACSEN*PCLLQP
Trigger: AGGCTGAAGAAGACAAGGTCAATTCTCTGAGCAAGC...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGAGCCTGTAGCTCCTTaGTTTTCTTCTGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGEPVAP*FSSEAG
Trigger: TCCAGCTTCAGAAGAAAATCAAGGAGCTACAGGCTC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGAGCCTGTAGCTCCTTaGTTTTCTTCTGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSEPVAP*FSSEAG
Trigger: TCCAGCTTCAGAAGAAAATCAAGGAGCTACAGGCTC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTAGGCATTCTTCAGTTTaGAGAGCTCAGTGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGRHSSV*RAQCSR
Trigger: CCTTGAGCACTGAGCTCTTCAAACTGAAGAATGCCT...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTAGGCATTCTTCAGTTTaGAGAGCTCAGTGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSRHSSV*RAQCSR
Trigger: CCTTGAGCACTGAGCTCTTCAAACTGAAGAATGCCT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCTTCCTATCAATCTCTaGTTTCACCTGGGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRLPINL*FHLGQF
Trigger: GAACTGACCCAGGTGAAATCAGAGATTGATAGGAAG...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACACTCTGGAGCTGCGTaGGGTCAGTCTCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAHSGAA*GQSPTS
Trigger: AGAAGTTGGAGACTGACCTCACGCAGCTCCAGAGTG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCTGAACTTGGTGAGATaGGCATTGGCTTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRLNLVR*ALACSS
Trigger: TGATGAACAAGCCAATGCTCATCTCACCAAGTTCAG...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACTTGCGGAGGAAAGGTaGAGCTATGCCAAACACTTC +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGLAEER*SYAKHF
Trigger: GAAGTGTTTGGCATAGCTGCACCTTTCCTCCGCAAG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGTTTTCCCTGAACAGTaGAGAGACGGTTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSVFPEQ*RDGLEG
Trigger: TCCTTCCAAACCGTCTCTGCACTGTTCAGGGAAAAC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGTTTTCCCTGAACAGTaGAGAGACGGTTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGVFPEQ*RDGLEG
Trigger: TCCTTCCAAACCGTCTCTGCACTGTTCAGGGAAAAC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTATGGACTCCCTCCTCTaGATCATCTTCTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSMDSLL*IIFWNS
Trigger: GGAATTCCAGAAGATGATGCAGAGGAGGGAGTCCAT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTAGTTTCATCCAGGCCTaGCAGTTCTTCGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGSFIQA*QFFGKV
Trigger: AACCTTACCGAAGAACTGGCAGGCCTGGATGAAACT...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGAGTTTCATCCAGGCCTaGCAGTTCTTCGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQESFIQA*QFFGKV
Trigger: AACCTTACCGAAGAACTGGCAGGCCTGGATGAAACT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAAGATCATCCACTTGCTaGTCCAGCTTGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGRSSTC*SSLLLS
Trigger: GCTCAAGAGCAAGCTGGAGCAGCAAGTGGATGATCT...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCTCTCGTCTAGCTGTTaGTTGTCGTTCTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSLSSSC*LSFSRS
Trigger: AGATCTGGAGAACGACAAGCAACAGCTAGACGAGAG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCTCGTCTAGCTGTTaGTTGTCGTTCTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGLSSSC*LSFSRS
Trigger: AGATCTGGAGAACGACAAGCAACAGCTAGACGAGAG...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTGGAGGCTCAAGGTCTaGTCATCTTCCACTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGWRLKV*SSSTLL
Trigger: AAGCAAAGTGGAAGATGAGCAGACCTTGAGCCTCCA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTTCTCTTCCTCCAGTTaGCTCTTGAGCTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGFSSSS*LLSSSI
Trigger: GATAGAGGAGCTCAAGAGGCAACTGGAGGAAGAGAA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATCCCCTTGCAGCCTCTaGTTGGTCTTTTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSPCSL*LVFSKE
Trigger: TTCCTTGGAAAAGACCAAGCAGAGGCTGCAAGGGGA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAATCTTGGCTTCTTCGTaGTCAAGAGCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGILASS*SRAASA
Trigger: AGCAGAGGCAGCTCTTGAGCACGAAGAAGCCAAGAT...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACTTGTGTTCTGGGTGTaGAGCAGCTGGACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPALVFWV*SSWTLS
Trigger: TGAGAGGGTCCAGCTGCTGCACACCCAGAACACAAG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGGCATACACGTCCTCTaGCTTAACCACCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAGIHVL*LNHQGP
Trigger: AGGACCCTGGTGGTTAAGCCAGAGGACGTGTATGCC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTAGTGCAGAGACGGTTTaGAAGGAAGAGCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGSAETV*KEEPFF
Trigger: GAAGAAAGGCTCTTCCTTCCAAACCGTCTCTGCACT...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTAGTGCAGAGACGGTTTaGAAGGAAGAGCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSAETV*KEEPFF
Trigger: GAAGAAAGGCTCTTCCTTCCAAACCGTCTCTGCACT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACAAGGCTGTGTTCCATaGCCCCTGGGGTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAQGCVP*PLGSWF
Trigger: AAACCAAGACCCCAGGGGCCATGGAACACAGCCTTG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGAGATCTTCTCCAGATTaGCCTTGGATTTGGACACGC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQERSSPD*PWIWTR
Trigger: GCGTGTCCAAATCCAAGGCCAATCTGGAGAAGATCT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTAGATCTTCTCCAGATTaGCCTTGGATTTGGACACGC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSRSSPD*PWIWTR
Trigger: GCGTGTCCAAATCCAAGGCCAATCTGGAGAAGATCT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGATCCGGAGAATCTTaGCTTCTTCGTGCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGGSGES*LLRAQE
Trigger: CTCTTGAGCACGAAGAAGCCAAGATTCTCCGGATCC...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCATCTTCTTCAGGCGGATaGCCTCATTCCTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPASSSGG*PHSCCA
Trigger: TGCGCAGCAGGAATGAGGCCATCCGCCTGAAGAAGA...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATCCTCTAGCTCATGCTaGGCTTTCCTGAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSSSSC*AFLNLV
Trigger: CACCAAGTTCAGGAAAGCCCAGCATGAGCTAGAGGA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTGTTCAAGTTTTCCCTaGACAGTGCAGAGACGGTTT +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSCSSFP*TVQRRF
Trigger: AAACCGTCTCTGCACTGTTCAGGGAAAACTTGAACA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACAAAGTCCTTCTTCTTaGGCCTCTCGTCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGQSPSS*ASRLAV
Trigger: AACAGCTAGACGAGAGGCTCAAGAAGAAGGACTTTG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCGGCAATCTGTTCAGTaGGATCTGCTATCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSRQSVQ*DLLSLV
Trigger: AACAAGAGATAGCAGATCTCACTGAACAGATTGCCG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCTTCCTATCAATCTCTaGTTTCACCTGGGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSLPINL*FHLGQF
Trigger: GAACTGACCCAGGTGAAATCAGAGATTGATAGGAAG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCTGAACTTGGTGAGATaGGCATTGGCTTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQELNLVR*ALACSS
Trigger: TGATGAACAAGCCAATGCTCATCTCACCAAGTTCAG...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGGTGGCATAGAGATGTaGCAGGAGTCTGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAGGIEM*QESVGG
Trigger: TCCTCCAACAGACTCCTGGCACATCTCTATGCCACC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATGGAGGCTCAAGGTCTaGTCATCTTCCACTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGWRLKV*SSSTLL
Trigger: AAGCAAAGTGGAAGATGAGCAGACCTTGAGCCTCCA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGCCTCCTCTAGCTCATaGTGGGCTTTCCTGAACTTG +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAASSSS*WAFLNL
Trigger: CAAGTTCAGGAAAGCCCAGCATGAGCTAGAGGAGGC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCGCAGTTTATTGACTTaGGATTCTGCGATATCAGCC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGRSLLT*DSAISA
Trigger: GGCTGATATCGCAGAATCGCAAGTCAATAAACTGCG...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAACTTGGGTGGGTTCATaGCATACACGTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPATWVGS*HTRPLA
Trigger: AGCCAGAGGACGTGTATGCCATGAACCCACCCAAGT...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTTGTATCCAGCTGCTaGTTAATACGAGTGACCATC +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRFVSSC*LIRVTI
Trigger: GATGGTCACTCGTATTAACCAGCAGCTGGATACAAA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGTGCCAGGAGTCTGTTaGAGGACTTCTGGTACAGTC +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAVPGVC*RTSGTV
Trigger: GACTGTACCAGAAGTCCTCCAACAGACTCCTGGCAC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGGGTCTTGGTTTCGTTaGGTATTATACAGCGTACAA +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRGSWFR*VLYSVQ
Trigger: TTGTACGCTGTATAATACCCAACGAAACCAAGACCC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATCTAATATGGACTCTTaGGCAAGCTTCAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSNMDS*ASFRSP
Trigger: GGGAGACCTGAAGCTTGCCCAAGAGTCCATATTAGA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCCAGATCTAATATaGACTCTTGGGCAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRSPDLI*TLGQAS
Trigger: TGAAGCTTGCCCAAGAGTCCATATTAGATCTGGAGA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGAAAGCACAAGGCCTTaGGGAGGTCTGAGGAATTCA +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAESTRP*GGLRNS
Trigger: TGAATTCCTCAGACCTCCTCAAGGCCTTGTGCTTTC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGCCTCTTGTAGGACTTaGCTTTCACTTGGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGASCRT*LSLGVY
Trigger: ATAAACTCCAAGTGAAAGTCAAGTCCTACAAGAGGC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAAGATCATCCACTTGCTaGTCCAGCTTGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPARSSTC*SSLLLS
Trigger: GCTCAAGAGCAAGCTGGAGCAGCAAGTGGATGATCT...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGCTCATCTTCCACTTTaGTTTGCAGCTGACTATATT +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRAHLPL*FAADYI
Trigger: AATATAGTCAGCTGCAAAGCAAAGTGGAAGATGAGC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACGCAGTTTATTGACTTaGGATTCTGCGATATCAGCC +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGRSLLT*DSAISA
Trigger: GGCTGATATCGCAGAATCGCAAGTCAATAAACTGCG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACAAAGCAGTAGGTTTTaGCATCAAAGGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGQSSRF*HQRAGS
Trigger: AGAACCAGCCCTTTGATGCCAAAACCTACTGCTTTG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGTTTGTATCCAGCTGCTaGTTAATACGAGTGACCATC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEFVSSC*LIRVTI
Trigger: GATGGTCACTCGTATTAACCAGCAGCTGGATACAAA...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCAAAGTGTGGGTGTGTaGTTCTTAAATTGGACATCA +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRQSVGV*FLNWTS
Trigger: TGATGTCCAATTTAAGAACCACACACCCACACTTTG...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGGGTCTTGGTTTCGTTaGGTATTATACAGCGTACAA +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSGSWFR*VLYSVQ
Trigger: TTGTACGCTGTATAATACCCAACGAAACCAAGACCC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTCTCCAGATCTAATATaGACTCTTGGGCAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGSPDLI*TLGQAS
Trigger: TGAAGCTTGCCCAAGAGTCCATATTAGATCTGGAGA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCTCATTCTTGCCCCTaGCCTCACTTAACTGATCCT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAPHSCP*PHLTDP
Trigger: AGGATCAGTTAAGTGAGGCCAGGGGCAAGAATGAGG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAAGCTCCTCTATCTGTTaGGTAAAGGCCTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPASSSIC*VKACLL
Trigger: GAGCAAGCAGGCCTTTACCCAACAGATAGAGGAGCT...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCTCCATCTGTTTTCTaGATTTCTCTAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEAPSVF*ISLAHG
Trigger: TCCATGAGCTAGAGAAATCCAGAAAACAGATGGAGC...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCAGCCTGCAGGAGGTTaGCTCTGCGTTCCACGATGG +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSQPAGG*LCVPRW
Trigger: CCATCGTGGAACGCAGAGCCAACCTCCTGCAGGCTG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCATCCTCTAGCTCATGCTaGGCTTTCCTGAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPASSSSC*AFLNLV
Trigger: CACCAAGTTCAGGAAAGCCCAGCATGAGCTAGAGGA...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGACATATTCTTCCTTTaGGTCAACCACAAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQEDIFFL*VNHKAV
Trigger: TACTGCTTTGTGGTTGACTCAAAGGAAGAATATGTC...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGACATATTCTTCCTTTaGGTCAACCACAAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSDIFFL*VNHKAV
Trigger: TACTGCTTTGTGGTTGACTCAAAGGAAGAATATGTC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGCTTGCTCAGAGAATTaGCCTTGTCTTCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAACSEN*PCLLQP
Trigger: AGGCTGAAGAAGACAAGGTCAATTCTCTGAGCAAGC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACAAAGTCCTTCTTCTTaGGCCTCTCGTCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAQSPSS*ASRLAV
Trigger: AACAGCTAGACGAGAGGCTCAAGAAGAAGGACTTTG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTACTTTGCTTTGCAGCTaGCTATATTCAAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSTLLCS*LYSKSF
Trigger: GAAGGACTTTGAATATAGTCAGCTGCAAAGCAAAGT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTACTTTGCTTTGCAGCTaGCTATATTCAAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGTLLCS*LYSKSF
Trigger: GAAGGACTTTGAATATAGTCAGCTGCAAAGCAAAGT...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCCTCTTGTAGGACTTaGCTTTCACTTGGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGASCRT*LSLGVY
Trigger: ATAAACTCCAAGTGAAAGTCAAGTCCTACAAGAGGC...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAATGGACTCCCTCCTCTaGATCATCTTCTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAMDSLL*IIFWNS
Trigger: GGAATTCCAGAAGATGATGCAGAGGAGGGAGTCCAT...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCGCGTGCATAGTCGCTaGGCTGCTTCTCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSRVHSR*AASLSW
Trigger: CCAAGACAGAGAAGCAGCGCAGCGACTATGCACGCG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCATTCTCTTCCTCCAGTTaGCTCTTGAGCTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAFSSSS*LLSSSI
Trigger: GATAGAGGAGCTCAAGAGGCAACTGGAGGAAGAGAA...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCTCAAGAGCTGCCTCTaGTTCCTCCAGCGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSLKSCL*FLQRHL
Trigger: CAGATGGCGCTGGAGGAAGCAGAGGCAGCTCTTGAG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTTCGTGCTCAAGAGCTaGCTCTGCTTCCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSFVLKS*LCFLQR
Trigger: GCGCTGGAGGAAGCAGAGGCAGCTCTTGAGCACGAA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTAGAGCGTCATCCAGGTaGAGCTGGGTGTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSRASSR*SWVSFS
Trigger: GCTGAAGGACACCCAGCTGCACCTGGATGACGCTCT...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTTATCCACCAGATCCTaGAATCTCAACACATTCTTC +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSLSTRS*NLNTFF
Trigger: GAAGAATGTGTTGAGATTGCAGGATCTGGTGGATAA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGTTATCCACCAGATCCTaGAATCTCAACACATTCTTC +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQELSTRS*NLNTFF
Trigger: GAAGAATGTGTTGAGATTGCAGGATCTGGTGGATAA...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCAAAGTGTGGGTGTGTaGTTCTTAAATTGGACATCA +
Preference number: 4 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSQSVGV*FLNWTS
Trigger: TGATGTCCAATTTAAGAACCACACACCCACACTTTG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATCTCCAGATCTAATATaGACTCTTGGGCAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSPDLI*TLGQAS
Trigger: TGAAGCTTGCCCAAGAGTCCATATTAGATCTGGAGA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCCGGGACTTCTGTGTaGTCAGCTCACTTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSAGTSV*SAHLGS
Trigger: GGAGCCTAAGTGAGCTGACCACACAGAAGTCCCGGC...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCTCCATCTGTTTTCTaGATTTCTCTAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGAPSVF*ISLAHG
Trigger: TCCATGAGCTAGAGAAATCCAGAAAACAGATGGAGC...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTCCTCCAGCGCCATCTaGATGTCAGCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSSSAI*MSAFSS
Trigger: GCTGGAGAAGGCTGACATCCAGATGGCGCTGGAGGA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCATGTTCAAGTTTTCCCTaGACAGTGCAGAGACGGTTT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPACSSFP*TVQRRF
Trigger: AAACCGTCTCTGCACTGTTCAGGGAAAACTTGAACA...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAACTTTGCTTTGCAGCTaGCTATATTCAAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGTLLCS*LYSKSF
Trigger: GAAGGACTTTGAATATAGTCAGCTGCAAAGCAAAGT...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCCTCCAGTTGCCTCTTaGGCTCCTCTATCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSPPVAS*APLSVG
Trigger: CCCAACAGATAGAGGAGCTCAAGAGGCAACTGGAGG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACTGAACTTGGTGAGATaGGCATTGGCTTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPALNLVR*ALACSS
Trigger: TGATGAACAAGCCAATGCTCATCTCACCAAGTTCAG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAAGCTTTGTATCCAGCTaGTGGTTAATACGAGTGACC +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPASFVSS*WLIRVT
Trigger: GGTCACTCGTATTAACCAGCAGCTGGATACAAAGCT...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCTCATCTTCCACTTTaGTTTGCAGCTGACTATATT +
Preference number: 4 (lower is better)
Translates to: LSGATKIYILHIFCPAPGAHLPL*FAADYI
Trigger: AATATAGTCAGCTGCAAAGCAAAGTGGAAGATGAGC...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGAGAGCTGAGATACAATaGTTTCCTTTTCTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRRAEIQ*FPFLLV
Trigger: AACTAGAAGAAAAGGAAAGCATTGTATCTCAGCTCT...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACAAAGCAGTAGGTTTTaGCATCAAAGGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAQSSRF*HQRAGS
Trigger: AGAACCAGCCCTTTGATGCCAAAACCTACTGCTTTG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCTGTTGGAGGACTTCTaGTACAGTCCCACCACGGTC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSLLEDF*YSPTTV
Trigger: GACCGTGGTGGGACTGTACCAGAAGTCCTCCAACAG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGTGTGGTTCTTAAATTaGACATCAGCTTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SGATKIYILHIFCPAPGGVWFLN*TSACSS
Trigger: ACTTGAACAAGCTGATGTCCAATTTAAGAACCACAC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCTGGAACTTGGCTTTaGTCAGCTGGTCGCATCGTT +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSAGTWL*SAGRIV
Trigger: AACGATGCGACCAGCTGATCAAAGCCAAGTTCCAGC...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCTGGCCTCACTTAACTaGTCCTCTAGAGTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSLASLN*SSRVRQ
Trigger: CTGCCGAACTCTAGAGGATCAGTTAAGTGAGGCCAG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGCCTCTTGTAGGACTTaGCTTTCACTTGGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAASCRT*LSLGVY
Trigger: ATAAACTCCAAGTGAAAGTCAAGTCCTACAAGAGGC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGAGAGCTGAGATACAATaGTTTCCTTTTCTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: CQEPRKYTFCISSALHQERAEIQ*FPFLLV
Trigger: AACTAGAAGAAAAGGAAAGCATTGTATCTCAGCTCT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGACATATTCTTCCTTTaGGTCAACCACAAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPADIFFL*VNHKAV
Trigger: TACTGCTTTGTGGTTGACTCAAAGGAAGAATATGTC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTGAAAGCACAAGGCCTTaGGGAGGTCTGAGGAATTCA +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSESTRP*GGLRNS
Trigger: TGAATTCCTCAGACCTCCTCAAGGCCTTGTGCTTTC...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTAGATCATCCACTTGCTaGTCCAGCTTGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSRSSTC*SSLLLS
Trigger: GCTCAAGAGCAAGCTGGAGCAGCAAGTGGATGATCT...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTCCAGATCATCCACTTaGTGCTCCAGCTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSRSST*CSSLLL
Trigger: CAAGAGCAAGCTGGAGCAGCAAGTGGATGATCTGGA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTCACTTAGGCTCCTCTaGATCTCCTCATTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSLRLL*ISSFLP
Trigger: GGGCAAGAATGAGGAGATGCAGAGGAGCCTAAGTGA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTCCCCTTGCAGCCTCTaGTTGGTCTTTTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSPCSL*LVFSKE
Trigger: TTCCTTGGAAAAGACCAAGCAGAGGCTGCAAGGGGA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTCTGTGTTCCTCTTCTaGTCCCCTTCCAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSVFLF*SPSSSN
Trigger: GTTTGAGCTGGAAGGGGAGCAGAAGAGGAACACAGA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACAAAGTGTGGGTGTGTaGTTCTTAAATTGGACATCA +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAQSVGV*FLNWTS
Trigger: TGATGTCCAATTTAAGAACCACACACCCACACTTTG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTAGCTCCTCTATCTGTTaGGTAAAGGCCTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSSSIC*VKACLL
Trigger: GAGCAAGCAGGCCTTTACCCAACAGATAGAGGAGCT...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCTTGCTCAGAGAATTaGCCTTGTCTTCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSACSEN*PCLLQP
Trigger: AGGCTGAAGAAGACAAGGTCAATTCTCTGAGCAAGC...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCAAAGTCCTTCTTCTTaGGCCTCTCGTCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSQSPSS*ASRLAV
Trigger: AACAGCTAGACGAGAGGCTCAAGAAGAAGGACTTTG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTAGGCATTCTTCAGTTTaGAGAGCTCAGTGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSRHSSV*RAQCSR
Trigger: CCTTGAGCACTGAGCTCTTCAAACTGAAGAATGCCT...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTGTTTTCCCTGAACAGTaGAGAGACGGTTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSVFPEQ*RDGLEG
Trigger: TCCTTCCAAACCGTCTCTGCACTGTTCAGGGAAAAC...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCTCTCGTCTAGCTGTTaGTTGTCGTTCTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSLSSSC*LSFSRS
Trigger: AGATCTGGAGAACGACAAGCAACAGCTAGACGAGAG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTTCTCTTCCTCCAGTTaGCTCTTGAGCTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSFSSSS*LLSSSI
Trigger: GATAGAGGAGCTCAAGAGGCAACTGGAGGAAGAGAA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTAGTGCAGAGACGGTTTaGAAGGAAGAGCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSAETV*KEEPFF
Trigger: GAAGAAAGGCTCTTCCTTCCAAACCGTCTCTGCACT...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGTGTGGTTCTTAAATTaGACATCAGCTTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: VELSGATKIYILHIFCPAVWFLN*TSACSS
Trigger: ACTTGAACAAGCTGATGTCCAATTTAAGAACCACAC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTCTAATATGGACTCTTaGGCAAGCTTCAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSNMDS*ASFRSP
Trigger: GGGAGACCTGAAGCTTGCCCAAGAGTCCATATTAGA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCGGCAATCTGTTCAGTaGGATCTGCTATCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSRQSVQ*DLLSLV
Trigger: AACAAGAGATAGCAGATCTCACTGAACAGATTGCCG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR TCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCTTCCTATCAATCTCTaGTTTCACCTGGGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSLPINL*FHLGQF
Trigger: GAACTGACCCAGGTGAAATCAGAGATTGATAGGAAG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCGCAGTTTATTGACTTaGGATTCTGCGATATCAGCC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSRSLLT*DSAISA
Trigger: GGCTGATATCGCAGAATCGCAAGTCAATAAACTGCG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTTTGTATCCAGCTGCTaGTTAATACGAGTGACCATC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSFVSSC*LIRVTI
Trigger: GATGGTCACTCGTATTAACCAGCAGCTGGATACAAA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTGGGTCTTGGTTTCGTTaGGTATTATACAGCGTACAA +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSGSWFR*VLYSVQ
Trigger: TTGTACGCTGTATAATACCCAACGAAACCAAGACCC...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCTCATCTTCCACTTTaGTTTGCAGCTGACTATATT +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSAHLPL*FAADYI
Trigger: AATATAGTCAGCTGCAAAGCAAAGTGGAAGATGAGC...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR GCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTTATCCACCAGATCCTaGAATCTCAACACATTCTTC +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSLSTRS*NLNTFF
Trigger: GAAGAATGTGTTGAGATTGCAGGATCTGGTGGATAA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CCA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTGTGTGGTTCTTAAATTaGACATCAGCTTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSVWFLN*TSACSS
Trigger: ACTTGAACAAGCTGATGTCCAATTTAAGAACCACAC...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CCA 90 bp GACGACTCAGCTCACCCGCCTCTGTCTGCAGCCGGGACTTCTGTGTaGTCAGCTCACTTAGGCTCCTCTGCATCTCCTCATTCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: DDSAHPPLSAAGTSV*SAHLGSSASPHSCP
Trigger: GGGGCAAGAATGAGGAGATGCAGAGGAGCCTAAGTGAGCTGACCACACAGAAGTCCCGGCTGCAGACAGAGGCGGGTGAGCTGAGTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGCGGCCTGGCGGTaGGCGTGGCTCAGCTGGATC +
Preference number: 5 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRSAAWR*AWLSWI
Trigger: GATCCAGCTGAGCCACGCCAACCGCCAGGCCGCAGA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGTCTGCGGCCTGGCGGTaGGCGTGGCTCAGCTGGATC +
Preference number: 5 (lower is better)
Translates to: CQEPRKYTFCISSALHQESAAWR*AWLSWI
Trigger: GATCCAGCTGAGCCACGCCAACCGCCAGGCCGCAGA...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS GCA 90 bp CGCTCATACTTCCTCAGGCCCTTCACAGACTCTGTGTTCCTCTTCTaGTCCCCTTCCAGCTCAAACTCCAGCTCTCTGATCCGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RSYFLRPFTDSVFLF*SPSSSNSSSLIRVS
Trigger: GGAGACACGGATCAGAGAGCTGGAGTTTGAGCTGGAAGGGGAGCAGAAGAGGAACACAGAGTCTGTGAAGGGCCTGAGGAAGTATGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATCTGCGGCCTGGCGGTaGGCGTGGCTCAGCTGGATC +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSAAWR*AWLSWI
Trigger: GATCCAGCTGAGCCACGCCAACCGCCAGGCCGCAGA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGAGCGTCCAGGGCGCCTaGCATGGTCTCCACTGTCCT +
Preference number: 5 (lower is better)
Translates to: CQEPRKYTFCISSALHQESVQGA*HGLHCP
Trigger: AGGACAGTGGAGACCATGCAAGGCGCCCTGGACGCT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTAGCGTCCAGGGCGCCTaGCATGGTCTCCACTGTCCT +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSVQGA*HGLHCP
Trigger: AGGACAGTGGAGACCATGCAAGGCGCCCTGGACGCT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CCA 90 bp GCTTCTTCGTGCTCAAGAGCTGCCTCTGCTTCCTCCAGCGCCATCTaGATGTCAGCCTTCTCCAGCTCCATCTGTTTTCTGGATTTCTCT +
Preference number: 5 (lower is better)
Translates to: ASSCSRAASASSSAI*MSAFSSSICFLDFS
Trigger: AGAGAAATCCAGAAAACAGATGGAGCTGGAGAAGGCTGACATCCAGATGGCGCTGGAGGAAGCAGAGGCAGCTCTTGAGCACGAAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTCCAGCTTCCTCTTCTaGGCCGTGAGCTCCGCGTTG +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSSFLF*AVSSAL
Trigger: CAACGCGGAGCTCACGGCCAAGAAGAGGAAGCTGGA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTGGGCCAGCGCGTTCTaGGCCTTGTTCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGWASAF*ALFSSS
Trigger: GGAGGAAGAGAACAAGGCCAAGAACGCGCTGGCCCA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTGGGCCAGCGCGTTCTaGGCCTTGTTCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSWASAF*ALFSSS
Trigger: GGAGGAAGAGAACAAGGCCAAGAACGCGCTGGCCCA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CCA 90 bp TGGTCAGCTCACTTAGGCTCCTCTGCATCTCCTCATTCTTGCCCCTaGCCTCACTTAACTGATCCTCTAGAGTTCGGCAGATCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: WSAHLGSSASPHSCP*PHLTDPLEFGRSSP
Trigger: TGGAGAAGATCTGCCGAACTCTAGAGGATCAGTTAAGTGAGGCCAGGGGCAAGAATGAGGAGATGCAGAGGAGCCTAAGTGAGCTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTGGAGTCCTTCTTCTaGGCAAGGTCCCCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRLESFF*ARSPVA
Trigger: AGCCACTGGGGACCTTGCCAAGAAGAAGGACTCCAA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATCCAGCTTCCTCTTCTaGGCCGTGAGCTCCGCGTTG +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSSFLF*AVSSAL
Trigger: CAACGCGGAGCTCACGGCCAAGAAGAGGAAGCTGGA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATGCCTCCAGCTCGGCTaGGCTCTCCTCACACTTCGT +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGCLQLG*ALLTLR
Trigger: ACGAAGTGTGAGGAGAGCCAAGCCGAGCTGGAGGCA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCCCTCTGCACACGGCTaGTGTCCGAGTGATCAGTTT +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSPSAHG*CPSDQF
Trigger: AAACTGATCACTCGGACACAAGCCGTGTGCAGAGGG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCCCTCTGCACACGGCTaGTGTCCGAGTGATCAGTTT +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGPSAHG*CPSDQF
Trigger: AAACTGATCACTCGGACACAAGCCGTGTGCAGAGGG...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGAGCTGGAACTTGGCTTaGATCAGCTGGTCGCATCGT +
Preference number: 5 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRSWNLA*ISWSHR
Trigger: ACGATGCGACCAGCTGATCAAAGCCAAGTTCCAGCT...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGAGCTCCTCTATCTGTaGGGTAAAGGCCTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRELLYL*GKGLLA
Trigger: AGCAAGCAGGCCTTTACCCAACAGATAGAGGAGCTC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTAGCGCGTTCTTGGCCTaGTTCTCTTCCTCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSAFLA*FSSSSC
Trigger: GCAACTGGAGGAAGAGAACAAGGCCAAGAACGCGCT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAAGCGTCCAGGGCGCCTaGCATGGTCTCCACTGTCCT +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPASVQGA*HGLHCP
Trigger: AGGACAGTGGAGACCATGCAAGGCGCCCTGGACGCT...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CCA 90 bp CCAGCGCCATCTGGATGTCAGCCTTCTCCAGCTCCATCTGTTTTCTaGATTTCTCTAGCTCATGGATGCTTTTACCGTTCTCGGCAATCT +
Preference number: 5 (lower is better)
Translates to: PAPSGCQPSPAPSVF*ISLAHGCFYRSRQS
Trigger: AGATTGCCGAGAACGGTAAAAGCATCCATGAGCTAGAGAAATCCAGAAAACAGATGGAGCTGGAGAAGGCTGACATCCAGATGGCGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGGAAAGCACAAGGCCTaGAGGAGGTCTGAGGAATTC +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGGKHKA*RRSEEF
Trigger: GAATTCCTCAGACCTCCTCAAGGCCTTGTGCTTTCC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGCTTCAGCCTTGCCTTaGACCACCTTAGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGASALP*TTLGFW
Trigger: CCAGAAACCTAAGGTGGTCAAAGGCAAGGCTGAAGC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCAGTGCAGAGACGGTTaGGAAGGAAGAGCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRQCRDG*EGRAFL
Trigger: AAGAAAGGCTCTTCCTTCCAAACCGTCTCTGCACTG...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTAGCTGGAACTTGGCTTaGATCAGCTGGTCGCATCGT +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSWNLA*ISWSHR
Trigger: ACGATGCGACCAGCTGATCAAAGCCAAGTTCCAGCT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGCTCCAGCTTGCTCTaGAGCTTGCTCAGAGAATTG +
Preference number: 5 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRCSSLL*SLLREL
Trigger: CAATTCTCTGAGCAAGCTCAAGAGCAAGCTGGAGCA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGCCCTCCAGCTTCCTTTaGTTCCTTTCTAGGTCCACA +
Preference number: 5 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRPSSFL*FLSRST
Trigger: TGTGGACCTAGAAAGGAACAAAAGGAAGCTGGAGGG...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTGCATCTCCTCATTCTaGCCCCTGGCCTCACTTAAC +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGCISSF*PLASLN
Trigger: GTTAAGTGAGGCCAGGGGCAAGAATGAGGAGATGCA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGGTTCTCTTCCTCCAGTaGCCTCTTGAGCTCCTCTAT +
Preference number: 5 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRVLFLQ*PLELLY
Trigger: ATAGAGGAGCTCAAGAGGCAACTGGAGGAAGAGAAC...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAAGCGCGTTCTTGGCCTaGTTCTCTTCCTCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSAFLA*FSSSSC
Trigger: GCAACTGGAGGAAGAGAACAAGGCCAAGAACGCGCT...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCATGGGCCAGCGCGTTCTaGGCCTTGTTCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPAWASAF*ALFSSS
Trigger: GGAGGAAGAGAACAAGGCCAAGAACGCGCTGGCCCA...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCATGCCTCCAGCTCGGCTaGGCTCTCCTCACACTTCGT +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPACLQLG*ALLTLR
Trigger: ACGAAGTGTGAGGAGAGCCAAGCCGAGCTGGAGGCA...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGAGATGAGCATTGGCTaGTTCATCAGCCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSEMSIG*FISLLS
Trigger: GCTGAGGAGGCTGATGAACAAGCCAATGCTCATCTC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTAGGTTTCTGGAAGTaGTTGGACTTTCCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRLGFWK*LDFPRC
Trigger: GCACCTGGGAAAGTCCAACAACTTCCAGAAACCTAA...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCAGTGCAGAGACGGTTaGGAAGGAAGAGCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGQCRDG*EGRAFL
Trigger: AAGAAAGGCTCTTCCTTCCAAACCGTCTCTGCACTG...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTATGGCCCCTGGGGTCTaGGTTTCGTTGGGTATTATA +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSMAPGV*VSLGII
Trigger: TATAATACCCAACGAAACCAAGACCCCAGGGGCCAT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTATGGCCCCTGGGGTCTaGGTTTCGTTGGGTATTATA +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGMAPGV*VSLGII
Trigger: TATAATACCCAACGAAACCAAGACCCCAGGGGCCAT...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTTAGCCAGCTCATCCTaGGTTTTCTGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGLASSS*VFWNSS
Trigger: GGAGGAGTTCCAGAAAACCAAGGATGAGCTGGCTAA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCAGAGAATTGACCTaGTCTTCTTCAGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGLRELT*SSSAWR
Trigger: CCTCCAGGCTGAAGAAGACAAGGTCAATTCTCTGAG...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCTCAGAGAATTGACCTaGTCTTCTTCAGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSLRELT*SSSAWR
Trigger: CCTCCAGGCTGAAGAAGACAAGGTCAATTCTCTGAG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCCCTCCAGCTTCCTTTaGTTCCTTTCTAGGTCCACA +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSPSSFL*FLSRST
Trigger: TGTGGACCTAGAAAGGAACAAAAGGAAGCTGGAGGG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCAGATCTTCTCCAGATaGGCCTTGGATTTGGACACG +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGQIFSR*ALDLDT
Trigger: CGTGTCCAAATCCAAGGCCAATCTGGAGAAGATCTG...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGTTCTCTTCCTCCAGTaGCCTCTTGAGCTCCTCTAT +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSVLFLQ*PLELLY
Trigger: ATAGAGGAGCTCAAGAGGCAACTGGAGGAAGAGAAC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCACTCAGCTAGCACCTaGTCAAAGTTCCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSHSAST*SKFLCF
Trigger: GAAGCAGAGGAACTTTGACAAGGTGCTAGCTGAGTG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCACTCAGCTAGCACCTaGTCAAAGTTCCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: CQEPRKYTFCISSALHQEHSAST*SKFLCF
Trigger: GAAGCAGAGGAACTTTGACAAGGTGCTAGCTGAGTG...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCCAACTTCTTCTaGGTGTGGATGAGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: CQEPRKYTFCISSALHQEVSNFF*VWMRLV
Trigger: CACAAGCCTCATCCACACCAAGAAGAAGTTGGAGAC...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCATTGGAGTCCTTCTTCTaGGCAAGGTCCCCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPALESFF*ARSPVA
Trigger: AGCCACTGGGGACCTTGCCAAGAAGAAGGACTCCAA...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGTTAGGTTTCTGGAAGTaGTTGGACTTTCCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: CQEPRKYTFCISSALHQELGFWK*LDFPRC
Trigger: GCACCTGGGAAAGTCCAACAACTTCCAGAAACCTAA...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACAGTGCAGAGACGGTTaGGAAGGAAGAGCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGQCRDG*EGRAFL
Trigger: AAGAAAGGCTCTTCCTTCCAAACCGTCTCTGCACTG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATTAGCCAGCTCATCCTaGGTTTTCTGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGLASSS*VFWNSS
Trigger: GGAGGAGTTCCAGAAAACCAAGGATGAGCTGGCTAA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTAAGGTTTTTGACCTaGTTCTCTGTGGCGTGCTTC +
Preference number: 5 (lower is better)
Translates to: CQEPRKYTFCISSALHQEVRFLT*FSVACF
Trigger: GAAGCACGCCACAGAGAACAAGGTCAAAAACCTTAC...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTGTAAGGTTTTTGACCTaGTTCTCTGTGGCGTGCTTC +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSVRFLT*FSVACF
Trigger: GAAGCACGCCACAGAGAACAAGGTCAAAAACCTTAC...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGTAAGGTTTTTGACCTaGTTCTCTGTGGCGTGCTTC +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGVRFLT*FSVACF
Trigger: GAAGCACGCCACAGAGAACAAGGTCAAAAACCTTAC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGAGCTTGCTCAGAGAATaGACCTTGTCTTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: CQEPRKYTFCISSALHQESLLRE*TLSSSA
Trigger: GGCTGAAGAAGACAAGGTCAATTCTCTGAGCAAGCT...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTAGCTTGCTCAGAGAATaGACCTTGTCTTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSLLRE*TLSSSA
Trigger: GGCTGAAGAAGACAAGGTCAATTCTCTGAGCAAGCT...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATGCTCCAGCTTGCTCTaGAGCTTGCTCAGAGAATTG +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGCSSLL*SLLREL
Trigger: CAATTCTCTGAGCAAGCTCAAGAGCAAGCTGGAGCA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACCCTCCAGCTTCCTTTaGTTCCTTTCTAGGTCCACA +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGPSSFL*FLSRST
Trigger: TGTGGACCTAGAAAGGAACAAAAGGAAGCTGGAGGG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGTCAAAGTCCTTCTTCTaGAGCCTCTCGTCTAGCTGT +
Preference number: 5 (lower is better)
Translates to: CQEPRKYTFCISSALHQESKSFF*SLSSSC
Trigger: ACAGCTAGACGAGAGGCTCAAGAAGAAGGACTTTGA...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGACAGATCTTCTCCAGATaGGCCTTGGATTTGGACACG +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGQIFSR*ALDLDT
Trigger: CGTGTCCAAATCCAAGGCCAATCTGGAGAAGATCTG...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAAGCGCGTTCTTGGCCTaGTTCTCTTCCTCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPASAFLA*FSSSSC
Trigger: GCAACTGGAGGAAGAGAACAAGGCCAAGAACGCGCT...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGTCTCCAACTTCTTCTaGGTGTGGATGAGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGVSNFF*VWMRLV
Trigger: CACAAGCCTCATCCACACCAAGAAGAAGTTGGAGAC...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCCGCAGTTTATTGACTaGCGATTCTGCGATATCAGC +
Preference number: 5 (lower is better)
Translates to: CQEPRKYTFCISSALHQEPQFID*RFCDIS
Trigger: GCTGATATCGCAGAATCGCAAGTCAATAAACTGCGG...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTCCGCAGTTTATTGACTaGCGATTCTGCGATATCAGC +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSPQFID*RFCDIS
Trigger: GCTGATATCGCAGAATCGCAAGTCAATAAACTGCGG...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATTAGGTTTCTGGAAGTaGTTGGACTTTCCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGLGFWK*LDFPRC
Trigger: GCACCTGGGAAAGTCCAACAACTTCCAGAAACCTAA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGCTTCAGCCTTGCCTTaGACCACCTTAGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPAASALP*TTLGFW
Trigger: CCAGAAACCTAAGGTGGTCAAAGGCAAGGCTGAAGC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTCGTCTAGCTGTTGCTaGTCGTTCTCCAGATCTAAT +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSSSSCC*SFSRSN
Trigger: ATTAGATCTGGAGAACGACAAGCAACAGCTAGACGA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATCAAAGTCCTTCTTCTaGAGCCTCTCGTCTAGCTGT +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSKSFF*SLSSSC
Trigger: ACAGCTAGACGAGAGGCTCAAGAAGAAGGACTTTGA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGAGCTCCTCTATCTGTaGGGTAAAGGCCTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPAELLYL*GKGLLA
Trigger: AGCAAGCAGGCCTTTACCCAACAGATAGAGGAGCTC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGAGATGAGCATTGGCTaGTTCATCAGCCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPAEMSIG*FISLLS
Trigger: GCTGAGGAGGCTGATGAACAAGCCAATGCTCATCTC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAAGCGTCCCCTTCATTTaGGAGTCCTTCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPASVPFI*ESFFLA
Trigger: TGCCAAGAAGAAGGACTCCAAAATGAAGGGGACGCT...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAATGGCCCCTGGGGTCTaGGTTTCGTTGGGTATTATA +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPAMAPGV*VSLGII
Trigger: TATAATACCCAACGAAACCAAGACCCCAGGGGCCAT...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTGCCTTAAAGAACACCTaGGTGTGTCCAAATTTGTAC +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGALKNT*VCPNLY
Trigger: GTACAAATTTGGACACACCAAGGTGTTCTTTAAGGC...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCATTAGCCAGCTCATCCTaGGTTTTCTGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPALASSS*VFWNSS
Trigger: GGAGGAGTTCCAGAAAACCAAGGATGAGCTGGCTAA...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTCCAGCTTCCTCTTCTaGGCCGTGAGCTCCGCGTTG +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSSFLF*AVSSAL
Trigger: CAACGCGGAGCTCACGGCCAAGAAGAGGAAGCTGGA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGATCGTCTAGCTGTTGCTaGTCGTTCTCCAGATCTAAT +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGSSSCC*SFSRSN
Trigger: ATTAGATCTGGAGAACGACAAGCAACAGCTAGACGA...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACAGATCTTCTCCAGATaGGCCTTGGATTTGGACACG +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPAQIFSR*ALDLDT
Trigger: CGTGTCCAAATCCAAGGCCAATCTGGAGAAGATCTG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAGTCTCCAACTTCTTCTaGGTGTGGATGAGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPAVSNFF*VWMRLV
Trigger: CACAAGCCTCATCCACACCAAGAAGAAGTTGGAGAC...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTGTGTGGTTCTTAAATaGGACATCAGCTTGTTCAAG +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGCVVLK*DISLFK
Trigger: CTTGAACAAGCTGATGTCCAATTTAAGAACCACACA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGTGTGTGGTTCTTAAATaGGACATCAGCTTGTTCAAG +
Preference number: 5 (lower is better)
Translates to: CQEPRKYTFCISSALHQECVVLK*DISLFK
Trigger: CTTGAACAAGCTGATGTCCAATTTAAGAACCACACA...CTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGCCTTAAAGAACACCTaGGTGTGTCCAAATTTGTAC +
Preference number: 5 (lower is better)
Translates to: LSGATKIYILHIFCPAPGALKNT*VCPNLY
Trigger: GTACAAATTTGGACACACCAAGGTGTTCTTTAAGGC...TCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGATCTTCCACTTTGCTTaGCAGCTGACTATATTCAAA +
Preference number: 5 (lower is better)
Translates to: VRSHENIHSAYLLPCTRRIFHFA*QLTIFK
Trigger: TTTGAATATAGTCAGCTGCAAAGCAAAGTGGAAGAT...CCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTCTTTTCACGGTTTCAAGTaGATCCAAGGCTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: RSHENIHSAYLLPCTRRSFHGFK*IQGFFI
Trigger: TATGAAGAAGCCTTGGATCAACTTGAAACCGTGAAA...AGACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp TCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCAGGAGGTTTTCACGGTTTCAAGTaGATCCAAGGCTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: SGATKIYILHIFCPAPGGFHGFK*IQGFFI
Trigger: TATGAAGAAGCCTTGGATCAACTTGAAACCGTGAAA...ACCTCCTGGTGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCACCGCAGTTTATTGACTaGCGATTCTGCGATATCAGC +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPAPQFID*RFCDIS
Trigger: GCTGATATCGCAGAATCGCAAGTCAATAAACTGCGG...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTGCATCTCCTCATTCTaGCCCCTGGCCTCACTTAAC +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSCISSF*PLASLN
Trigger: GTTAAGTGAGGCCAGGGGCAAGAATGAGGAGATGCA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTGAGCTCCTCTATCTGTaGGGTAAAGGCCTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSELLYL*GKGLLA
Trigger: AGCAAGCAGGCCTTTACCCAACAGATAGAGGAGCTC...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTGAGATGAGCATTGGCTaGTTCATCAGCCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSEMSIG*FISLLS
Trigger: GCTGAGGAGGCTGATGAACAAGCCAATGCTCATCTC...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTAGCGTCCCCTTCATTTaGGAGTCCTTCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSVPFI*ESFFLA
Trigger: TGCCAAGAAGAAGGACTCCAAAATGAAGGGGACGCT...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp GTAGAATTGTCAGGAGCCACGAAAATATACATTCTGCATATCTTCTGCCCTGCAAAATTGGACATCAGCTaGTTCAAGTTTTCCCTGAAC +
Preference number: 5 (lower is better)
Translates to: VELSGATKIYILHIFCPAKLDIS*FKFSLN
Trigger: GTTCAGGGAAAACTTGAACAAGCTGATGTCCAATTT...TGCAGGGCAGAAGATATGCAGAATGTATATTTTCGTGGCTCCTGACAATTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTCTCAGAGAATTGACCTaGTCTTCTTCAGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSLRELT*SSSAWR
Trigger: CCTCCAGGCTGAAGAAGACAAGGTCAATTCTCTGAG...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTAGCTTGCTCAGAGAATaGACCTTGTCTTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSLLRE*TLSSSA
Trigger: GGCTGAAGAAGACAAGGTCAATTCTCTGAGCAAGCT...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTCAAAGTCCTTCTTCTaGAGCCTCTCGTCTAGCTGT +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSKSFF*SLSSSC
Trigger: ACAGCTAGACGAGAGGCTCAAGAAGAAGGACTTTGA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTCGTCTAGCTGTTGCTaGTCGTTCTCCAGATCTAAT +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSSSSCC*SFSRSN
Trigger: ATTAGATCTGGAGAACGACAAGCAACAGCTAGACGA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTAAATTGGACATCAGCTaGTTCAAGTTTTCCCTGAAC +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSKLDIS*FKFSLN
Trigger: GTTCAGGGAAAACTTGAACAAGCTGATGTCCAATTT...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTTGTGTGGTTCTTAAATaGGACATCAGCTTGTTCAAG +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSCVVLK*DISLFK
Trigger: CTTGAACAAGCTGATGTCCAATTTAAGAACCACACA...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS-3UTR CAA 90 bp AGTGATACGTGGAAATTAAGTAGAATTGTCAGGAGCCACGAAAATATACATTCTATCTTCCACTTTGCTTaGCAGCTGACTATATTCAAA +
Preference number: 5 (lower is better)
Translates to: SDTWKLSRIVRSHENIHSIFHFA*QLTIFK
Trigger: TTTGAATATAGTCAGCTGCAAAGCAAAGTGGAAGAT...AGAATGTATATTTTCGTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CCA 72 bp GCTCACCCGCCTCTGTCTGCAGCCGGGACTTCTGTGTaGTCAGCTCACTTAGGCTCCTCTGCATCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: AHPPLSAAGTSV*SAHLGSSASPH
Trigger: ATGAGGAGATGCAGAGGAGCCTAAGTGAGCTGACCACACAGAAGTCCCGGCTGCAGACAGAGGCGGGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CCA 72 bp TTCCTTGCGTCCCTGCAGGCATCCTCCACCTCACTCTaGAGCTGCGTGAGGTCAGTCTCCAACTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: FLASLQASSTSL*SCVRSVSNFFL
Trigger: CAAGAAGAAGTTGGAGACTGACCTCACGCAGCTCCAGAGTGAGGTGGAGGATGCCTGCAGGGACGCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS GCA 72 bp CGGGACTTCTGTGTGGTCAGCTCACTTAGGCTCCTCTaGATCTCCTCATTCTTGCCCCTGGCCTCACTTAAC +
Preference number: 6 (lower is better)
Translates to: RDFCVVSSLRLL*ISSFLPLASLN
Trigger: GTTAAGTGAGGCCAGGGGCAAGAATGAGGAGATGCAGAGGAGCCTAAGTGAGCTGACCACACAGAAGTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CCA 72 bp TGCTCAAGAGCTGCCTCTGCTTCCTCCAGCGCCATCTaGATGTCAGCCTTCTCCAGCTCCATCTGTTTTCTG +
Preference number: 6 (lower is better)
Translates to: CSRAASASSSAI*MSAFSSSICFL
Trigger: CAGAAAACAGATGGAGCTGGAGAAGGCTGACATCCAGATGGCGCTGGAGGAAGCAGAGGCAGCTCTTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS GCA 72 bp GTCCGCATCTGTTGTAGCGAAGGTGGCATAGAGATGTaGCAGGAGTCTGTTGGAGGACTTCTGGTACAGTCC +
Preference number: 6 (lower is better)
Translates to: VRICCSEGGIEM*QESVGGLLVQS
Trigger: GGACTGTACCAGAAGTCCTCCAACAGACTCCTGGCACATCTCTATGCCACCTTCGCTACAACAGATGCGGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS TCA 72 bp CATTCCCGACTTTCACTCTGGGAAAGCACAAGGCCTTaGGGAGGTCTGAGGAATTCAGGCCCATCAAGTAGG +
Preference number: 6 (lower is better)
Translates to: HSRLSLWESTRP*GGLRNSGPSSR
Trigger: CCTACTTGATGGGCCTGAATTCCTCAGACCTCCTCAAGGCCTTGTGCTTTCCCAGAGTGAAAGTCGGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS GCA 72 bp GACCACCATCCGGCTAGAGGTGAAGTCACGGGTCTTTaGCCGCAGTTTATTGACTTGCGATTCTGCGATATC +
Preference number: 6 (lower is better)
Translates to: DHHPARGEVTGL*PQFIDLRFCDI
Trigger: GATATCGCAGAATCGCAAGTCAATAAACTGCGGGCAAAGACCCGTGACTTCACCTCTAGCCGGATGGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS GCA 72 bp TCTTGTTCGAGGGAGCTCTCCAGATCATCCACTTGCTaGTCCAGCTTGCTCTTGAGCTTGCTCAGAGAATTG +
Preference number: 6 (lower is better)
Translates to: SCSRELSRSSTC*SSLLLSLLREL
Trigger: CAATTCTCTGAGCAAGCTCAAGAGCAAGCTGGAGCAGCAAGTGGATGATCTGGAGAGCTCCCTCGAACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CAA 90 bp CTTCTGAAGCTGGAGGCTCAAGGTCTGCTCATCTTCCACTTTGCTTaGCAGCTGACTATATTCAAAGTCCTTCTTCTTGAGCCTCTCGTC +
Preference number: 6 (lower is better)
Translates to: LLKLEAQGLLIFHFA*QLTIFKVLLLEPLV
Trigger: GACGAGAGGCTCAAGAAGAAGGACTTTGAATATAGTCAGCTGCAAAGCAAAGTGGAAGATGAGCAGACCTTGAGCCTCCAGCTTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CAA 72 bp AAGTCCTTCTTCTTGAGCCTCTCGTCTAGCTGTTGCTaGTCGTTCTCCAGATCTAATATGGACTCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: KSFFLSLSSSCC*SFSRSNMDSWA
Trigger: TGCCCAAGAGTCCATATTAGATCTGGAGAACGACAAGCAACAGCTAGACGAGAGGCTCAAGAAGAAGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CAA 90 bp CTATATTCAAAGTCCTTCTTCTTGAGCCTCTCGTCTAGCTGTTGCTaGTCGTTCTCCAGATCTAATATGGACTCTTGGGCAAGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: LYSKSFFLSLSSSCC*SFSRSNMDSWASFR
Trigger: CCTGAAGCTTGCCCAAGAGTCCATATTAGATCTGGAGAACGACAAGCAACAGCTAGACGAGAGGCTCAAGAAGAAGGACTTTGAATATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS TCA 72 bp TGCTTTGCAGCTGACTATATTCAAAGTCCTTCTTCTTaGGCCTCTCGTCTAGCTGTTGCTTGTCGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: CFAADYIQSPSS*ASRLAVACRSP
Trigger: TGGAGAACGACAAGCAACAGCTAGACGAGAGGCTCAAGAAGAAGGACTTTGAATATAGTCAGCTGCAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS GCA 72 bp TCAAAGTCCTTCTTCTTGAGCCTCTCGTCTAGCTGTTaGTTGTCGTTCTCCAGATCTAATATGGACTCTTGG +
Preference number: 6 (lower is better)
Translates to: SKSFFLSLSSSC*LSFSRSNMDSW
Trigger: CCAAGAGTCCATATTAGATCTGGAGAACGACAAGCAACAGCTAGACGAGAGGCTCAAGAAGAAGGACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS GCA 72 bp GAAGCTGGAGGCTCAAGGTCTGCTCATCTTCCACTTTaGTTTGCAGCTGACTATATTCAAAGTCCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: EAGGSRSAHLPL*FAADYIQSPSS
Trigger: AGAAGAAGGACTTTGAATATAGTCAGCTGCAAAGCAAAGTGGAAGATGAGCAGACCTTGAGCCTCCAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CCA 72 bp TCTGGATGTCAGCCTTCTCCAGCTCCATCTGTTTTCTaGATTTCTCTAGCTCATGGATGCTTTTACCGTTCT +
Preference number: 6 (lower is better)
Translates to: SGCQPSPAPSVF*ISLAHGCFYRS
Trigger: AGAACGGTAAAAGCATCCATGAGCTAGAGAAATCCAGAAAACAGATGGAGCTGGAGAAGGCTGACATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CAA 72 bp CTGGAGGCTCAAGGTCTGCTCATCTTCCACTTTGCTTaGCAGCTGACTATATTCAAAGTCCTTCTTCTTGAG +
Preference number: 6 (lower is better)
Translates to: LEAQGLLIFHFA*QLTIFKVLLLE
Trigger: CTCAAGAAGAAGGACTTTGAATATAGTCAGCTGCAAAGCAAAGTGGAAGATGAGCAGACCTTGAGCCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CCA 72 bp TTGTTCAAGTTTTCCCTGAACAGTGCAGAGACGGTTTaGAAGGAAGAGCCTTTCTTCTTAGCGACTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LFKFSLNSAETV*KEEPFFLATFF
Trigger: GAAGAAAGTCGCTAAGAAGAAAGGCTCTTCCTTCCAAACCGTCTCTGCACTGTTCAGGGAAAACTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS CAA 72 bp CTTGTTCAAGTTTTCCCTGAACAGTGCAGAGACGGTTaGGAAGGAAGAGCCTTTCTTCTTAGCGACTTTCTT +
Preference number: 6 (lower is better)
Translates to: LVQVFPEQCRDG*EGRAFLLSDFL
Trigger: AAGAAAGTCGCTAAGAAGAAAGGCTCTTCCTTCCAAACCGTCTCTGCACTGTTCAGGGAAAACTTGAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2
CDS TCA 72 bp CATGGATGCTTTTACCGTTCTCGGCAATCTGTTCAGTaGGATCTGCTATCTCTTGTTCTAAGTTCTTATTCT +
Preference number: 6 (lower is better)
Translates to: HGCFYRSRQSVQ*DLLSLVLSSYS
Trigger: AGAATAAGAACTTAGAACAAGAGATAGCAGATCTCACTGAACAGATTGCCGAGAACGGTAAAAGCATCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000007301.14
ENSMUST00000108689.8
ENSMUST00000165221.2