RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYH11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018830

Ensembl transcript IDs: ENSMUST00000090287.5, ENSMUST00000230397.2, ENSMUST00000231567.2

Found 772 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTaGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTC +
Preference number: 1 (lower is better)
Translates to: GISSQTGRSGRSGKG*EWVGGCGTHSCNFL
Trigger: GAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR CCA 90 bp GGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTaGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGG +
Preference number: 1 (lower is better)
Translates to: GRKGKGIFKRDFLPN*KVRQVRERLGVGWG
Trigger: CCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR CCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCCTTTGTGCAGGGCTGTaGTTGACTCCTGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGLCAGL*LTPGEG
Trigger: CCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAG...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR CCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGCTTTGTGCAGGGCTGTaGTTGACTCCTGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGLCAGL*LTPGEG
Trigger: CCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAG...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR CCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCACTCCTGGTGAGGGGTaGAGTGATTTCTGTGACTTG +
Preference number: 2 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGTPGEG*SDFCDL
Trigger: CAAGTCACAGAAATCACTCCACCCCTCACCAGGAGT...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR CCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGACTCCTGGTGAGGGGTaGAGTGATTTCTGTGACTTG +
Preference number: 2 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVTPGEG*SDFCDL
Trigger: CAAGTCACAGAAATCACTCCACCCCTCACCAGGAGT...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR CAA 90 bp CCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTaGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTA +
Preference number: 2 (lower is better)
Translates to: PKLEGQAGQGKVGSG*GAVAPIHVTSSFHV
Trigger: TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR TCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCGTGATTTCTGTGACTTaGGAACGAATGGACACAAGT +
Preference number: 2 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGVISVT*ERMDTS
Trigger: ACTTGTGTCCATTCGTTCTCAAGTCACAGAAATCAC...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR TCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGTGATTTCTGTGACTTaGGAACGAATGGACACAAGT +
Preference number: 2 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCVISVT*ERMDTS
Trigger: ACTTGTGTCCATTCGTTCTCAAGTCACAGAAATCAC...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR TCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTAAACAAAGTTGCTGGTaGCTGTGGCTCCTGACCTGT +
Preference number: 2 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVKQSCW*LWLLTC
Trigger: ACAGGTCAGGAGCCACAGTCACCAGCAACTTTGTTT...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR TCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTCTGGAAGGAACAAATaGAGCCTCGTTTCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: VPLKSESRASISSSEPSVSGRNK*SLVSSP
Trigger: AGGAGAGGAAACGAGGCTTCATTTGTTCCTTCCAGA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
3UTR-3UTR TCA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCAAACAAAGTTGCTGGTaGCTGTGGCTCCTGACCTGT +
Preference number: 2 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCKQSCW*LWLLTC
Trigger: ACAGGTCAGGAGCCACAGTCACCAGCAACTTTGTTT...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
3UTR CCA 72 bp ACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTaGGTTGGGGGCTGTGGCACCCATTCATGTAACTTC +
Preference number: 3 (lower is better)
Translates to: TGRSGRSGKGWE*VGGCGTHSCNF
Trigger: GAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR CAA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGACAGGTCAGGGAAAGGTaGGGAGTGGGTTGGGGGCTG +
Preference number: 3 (lower is better)
Translates to: WQAGKGREFSNGISSQTGQVRER*GVGWGL
Trigger: CAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTG...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR CAA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCAGTGATTTCTGTGACTaGAGAACGAATGGACACAAG +
Preference number: 3 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGSDFCD*RTNGHK
Trigger: CTTGTGTCCATTCGTTCTCAAGTCACAGAAATCACT...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR CCA 72 bp CTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTaGAGTGATTTCTGTGACTTGAGAACGAATGGACAC +
Preference number: 3 (lower is better)
Translates to: LCAGLWLTPGEG*SDFCDLRTNGH
Trigger: GTGTCCATTCGTTCTCAAGTCACAGAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
3UTR CCA 72 bp GGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTaGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTG +
Preference number: 3 (lower is better)
Translates to: GKGIFKRDFLPN*KVRQVRERLGV
Trigger: CACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR TCA 72 bp GAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTaGCTCCTGGTGAGGGGTGGAGTGATTTCTGTGACT +
Preference number: 3 (lower is better)
Translates to: ELEFTPFVQGCG*LLVRGGVISVT
Trigger: AGTCACAGAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR GCA 72 bp TTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTaGTCTGCTCCGCTCGCTCTGGGAGCAGTGTTTCTT +
Preference number: 3 (lower is better)
Translates to: LVKVTMGANKCD*SAPLALGAVFL
Trigger: AAGAAACACTGCTCCCAGAGCGAGCGGAGCAGAGCAATCACACTTATTTGCACCCATGGTCACTTTCACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
3UTR-3UTR CAA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAAGCCCATCTAAGAACTaGAATTCACACCCTTTGTGC +
Preference number: 3 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKSPSKN*NSHPLC
Trigger: GCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR CAA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGACCTGTACGTCTTATTaGGATTTTTCTCTGATAGCC +
Preference number: 3 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKTCTSY*DFSLIA
Trigger: GGCTATCAGAGAAAAATCCAAATAAGACGTACAGGT...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR TCA 72 bp CTGAATTTATTCACTGGCTTTGGTTCCATTGAAGTCTaGGTCCCGAGCGTCCATTTCTTCTTCAGAACCATC +
Preference number: 3 (lower is better)
Translates to: LNLFTGFGSIEV*VPSVHFFFRTI
Trigger: GATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAGTGAATAAATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
3UTR TCA 72 bp TATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTaGATTCACACCCTTTGTGCAGGGCTGTGGTTGACT +
Preference number: 3 (lower is better)
Translates to: YLDFSLIAHLRT*IHTLCAGLWLT
Trigger: AGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR CAA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCACCTGTACGTCTTATTaGGATTTTTCTCTGATAGCC +
Preference number: 3 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGTCTSY*DFSLIA
Trigger: GGCTATCAGAGAAAAATCCAAATAAGACGTACAGGT...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
3UTR-3UTR CAA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCAGTGATTTCTGTGACTaGAGAACGAATGGACACAAG +
Preference number: 3 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCSDFCD*RTNGHK
Trigger: CTTGTGTCCATTCGTTCTCAAGTCACAGAAATCACT...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR TCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTCCTGCGGTTGGCGTTaGTGCGCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGSCGWR*CAGTPP
Trigger: AGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTCATCTAGCTCCCGCTaGAGCTTCCTGCGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGSSSSR*SFLRLA
Trigger: CGCCAACCGCAGGAAGCTGCAGCGGGAGCTAGATGA...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTGGACCTGGGCCTCATaGGACCGCGTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGWTWAS*DRVSSS
Trigger: GGATGAGGAGACGCGGTCCCATGAGGCCCAGGTCCA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCACCTCCTGCTTCGCCTaGCCCAGGACACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFTSCFA*PRTRSS
Trigger: GGAGCTGCGTGTCCTGGGCCAGGCGAAGCAGGAGGT...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCGCGCTCTCATTCTTCTaGGCCGTGCTGCGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGALSFF*AVLRSV
Trigger: CACAGAACGCAGCACGGCTCAGAAGAATGAGAGCGC...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGAGGAAGGAGGCCCCCTaGCGATGGGTCTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVRKEAP*RWVLSK
Trigger: CTTGGACAAGACCCATCGGCAGGGGGCCTCCTTCCT...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTTCCTGCTTCTTGGCTaGCAACCGGACCCGCATCTC +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGFLLLG*QPDPHL
Trigger: GAGATGCGGGTCCGGTTGGCAGCCAAGAAGCAGGAA...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCGCATCCTCAGTGGCCTaGAGCTCATCCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGASSVA*SSSSNS
Trigger: GGAGTTGGAGGATGAGCTGCAGGCCACTGAGGATGC...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGCGAGCTCTCTCAGCTaGTGCCAGGTCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGASSLS*CQVLLE
Trigger: CTCCAAGAGGACCTGGCAGCAGCTGAGAGAGCTCGC...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATCGTTCCTCCTCTAGGTaGGCCAGGACCCCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDRSSSR*ARTPVR
Trigger: CCGAACGGGGGTCCTGGCCCACCTAGAGGAGGAACG...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTTGCCTTGGCCCTTTTaGACTGCTCCAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGLPWPF*TAPAAL
Trigger: CAGAGCAGCTGGAGCAGTTCAAAAGGGCCAAGGCAA...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCGGTCAGCCAGGCACTTaGATTGTAGTCCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGGQPGT*IVVHLP
Trigger: GGGAAGGTGGACTACAATGCAAGTGCCTGGCTGACC...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGAGCCCTGACGGCAGATaGGGATGCCTTCCAACACAC +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVSPDGR*GCLPTH
Trigger: GTGTGTTGGAAGGCATCCGCATCTGCCGTCAGGGCT...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCGCCTGCAACTGCTCCTaGAGCAGAGTCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGACNCS*SRVFSS
Trigger: TGAGGAGAAGACTCTGCTGCAGGAGCAGTTGCAGGC...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTTCCTGCTTCTTGGCTaGCAACCGGACCCGCATCTC +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCFLLLG*QPDPHL
Trigger: GAGATGCGGGTCCGGTTGGCAGCCAAGAAGCAGGAA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCCTGTGGCCAGCTCATTaGTCAGTTGCTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGLWPAH*SVAQPA
Trigger: TGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAG...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGTCATCTTGGCCATCTaGTCCAGCCCCACAATGCGG +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCVILAI*SSPTMR
Trigger: CCGCATTGTGGGGCTGGACCAGATGGCCAAGATGAC...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGGTCTTGGAGGCACTaGGCAGTGAGCTCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGWSWRH*AVSSQS
Trigger: TGACTGAGAGCTCACTGCCCAGTGCCTCCAAGACCA...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTCGTTCCTCCTCTAGGTaGGCCAGGACCCCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVRSSSR*ARTPVR
Trigger: CCGAACGGGGGTCCTGGCCCACCTAGAGGAGGAACG...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGTCAGCCTGTAGTTGCTaGCCCCGGTCTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVSACSC*PRSSSS
Trigger: GGAAGAGGAAGACCGGGGCCAGCAACTACAGGCTGA...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTGGACCTGGGCCTCATaGGACCGCGTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDWTWAS*DRVSSS
Trigger: GGATGAGGAGACGCGGTCCCATGAGGCCCAGGTCCA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCCTCTAGCCGCAGCTTaGCATCCTCAGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFPLAAA*HPQWPA
Trigger: TGCAGGCCACTGAGGATGCCAAGCTGCGGCTAGAGG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGGCTTCAGCGACTTGGTaGCCGCCTGTTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVASATW*PPVSLW
Trigger: CCAGAGAGAAACAGGCGGCCACCAAGTCGCTGAAGC...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGACTTCTCATCATCGCTaGGCTGCCCTTTCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGTSHHR*AALSAP
Trigger: TGGCGCAGAAAGGGCAGCTCAGCGATGATGAGAAGT...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGTACTTGTAGGGGTTaGCCACCACACAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGGTCRG*PPHRRG
Trigger: GCCTCTTCTGTGTGGTGGTCAACCCCTACAAGTACC...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTTTCCAGCTCCCCCGTaGTGCTGCTGTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCFPAPP*CCCLSC
Trigger: GCAAGAAAGACAGCAGCATCACGGGGGAGCTGGAAA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR TCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTACCTCCAGCTCCGTCTTaGGTGCCTCCAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVPPAPS*VPPAPP
Trigger: GGGAGGAGCTGGAGGCACTCAAGACGGAGCTGGAGG...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGAGCTCTTGGGTGTCCTaGAGCTGGGATCCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVSSWVS*SWDPRE
Trigger: TTCCCTTGGATCCCAGCTTCAGGACACCCAAGAGCT...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGCTGCTGTCTTTCTTaGCCTTGTGGGAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGCCCLS*PCGRMP
Trigger: TGGCATCCTCCCACAAGGGCAAGAAAGACAGCAGCA...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCGGTCCAGCCCCACAATaGGGTCCACATCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFGPAPQ*GPHPST
Trigger: TGTGGAAGGATGTGGACCGCATTGTGGGGCTGGACC...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGATGGCTGTCAGCTGTTaGTGCCTCTTGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGMAVSC*CLLVKA
Trigger: GGCCTTCACCAAGAGGCAGCAACAGCTGACAGCCAT...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTATGGCTGTCAGCTGTTaGTGCCTCTTGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCMAVSC*CLLVKA
Trigger: GGCCTTCACCAAGAGGCAGCAACAGCTGACAGCCAT...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCCTTCAACTCAGTCTCTaGCTTCTGCTGCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGLQLSL*LLLPLL
Trigger: AAGGAGCGGCAGCAGAAGGCAGAGACTGAGTTGAAG...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGTCTCTGCCTGCAACTaGTCCTGCAGCAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGVSACN*SCSRVF
Trigger: GAAGACTCTGCTGCAGGAGCAGTTGCAGGCAGAGAC...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCTCTCAGCCTGTAGTTaGTGGCCCCGGTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFLSACS*WPRSSS
Trigger: AGAGGAAGACCGGGGCCAGCAACTACAGGCTGAGAG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGCACGCTCCCCATCACTaGACTTGGACTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGHAPHH*TWTADP
Trigger: AGGATCTGCAGTCCAAGTGCAGTGATGGGGAGCGTG...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGGCGCTCCAGGTTTTaGTTAGCCTCCATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGWRSRF*LASISS
Trigger: TGAGGAGATGGAGGCTAAGCAAAACCTGGAGCGCCA...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTCTTTTCCCTGGCCTCTaGTTCAGCTCGGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCLFPGL*FSSVSL
Trigger: GAGAGAGACCGAGCTGAAGCAGAGGCCAGGGAAAAG...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTAGGTCCTCTTGGAGCTaGATGAGGTCTGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCRSSWS*MRSASR
Trigger: TCTGGAGGCAGACCTCATGCAGCTCCAAGAGGACCT...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTCTTCTGAGCCGTGCTaGGTTCTGTGGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCSSEPC*VLWPAH
Trigger: ATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTCATTCTTCTGAGCCGTaGTGCGTTCTGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCHSSEP*CVLWPA
Trigger: AGCTGGCCACAGAACGCAGCACGGCTCAGAAGAATG...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGGCCTGCTCCTTGTACTaGTCTGCCATCTTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVACSLY*SAILRS
Trigger: TGAGCGCAAGATGGCAGAGCAGTACAAGGAGCAGGC...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTCAGCCTGTAGTTGCTaGCCCCGGTCTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFSACSC*PRSSSS
Trigger: GGAAGAGGAAGACCGGGGCCAGCAACTACAGGCTGA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTTGAGCTCTGCAATCTaGGCCTGCAAGTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGLSSAI*ACKSAI
Trigger: GATCGCTGACTTGCAGGCCCAGATTGCAGAGCTCAA...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTCTCGGCCTTGTTCCTaGCAGCCCGCTCTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFSRPCS*QPALSL
Trigger: TAGACTCAGAGCGGGCTGCCAGGAACAAGGCCGAGA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCCAAAGATCTCATCCCTaGAGGCACGGGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGQRSHP*RHGHHP
Trigger: TGGATGATGCCCGTGCCTCCAGGGATGAGATCTTTG...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTCCTCATTGCTCTCTGTaGCCTCATCTAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCPHCSL*PHLAPA
Trigger: AGCGGGAGCTAGATGAGGCCACAGAGAGCAATGAGG...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGCCTCATTGCTCTCTGTaGCCTCATCTAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVPHCSL*PHLAPA
Trigger: AGCGGGAGCTAGATGAGGCCACAGAGAGCAATGAGG...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGTCTGCTGCCGCTCCTTaGTCTTTTGCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVSAAAP*SFASPP
Trigger: AGGAGGAGATGCAAAAGATCAAGGAGCGGCAGCAGA...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCCTCCAGTTTCCTCTTaGGTTTCTCCAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFPPVSS*VSPAPA
Trigger: GGCAGGAGCTGGAGAAACTCAAGAGGAAACTGGAGG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACCTCCAGCTCCGTCTTaGGTGCCTCCAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGPPAPS*VPPAPP
Trigger: GGGAGGAGCTGGAGGCACTCAAGACGGAGCTGGAGG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGCATCTTTGGCCAGTTTaGTGGCTTTGCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGHLWPV*WLCPLP
Trigger: AGGCAGAGGGCAAAGCCATCAAACTGGCCAAAGATG...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGTCTTCCCCTCCTCCATaGCCTCGATGGTACTTGCAA +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVSSPPP*PRWYLQ
Trigger: TTGCAAGTACCATCGAGGTCATGGAGGAGGGGAAGA...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGCGCTCTCATTCTTCTaGGCCGTGCTGCGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDALSFF*AVLRSV
Trigger: CACAGAACGCAGCACGGCTCAGAAGAATGAGAGCGC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGGGTTCCATTGAAGTCTaGGTCCCGAGCGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVGSIEV*VPSVHF
Trigger: GAAATGGACGCTCGGGACTCAGACTTCAATGGAACC...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTGGCTTTGGTTCCATTaGAGTCTGAGTCCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCWLWFH*SLSPER
Trigger: ACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCAGCAATATCCAGAATaGCCAGGAAGGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFQQYPE*PGRRPP
Trigger: AGGGGGCCTCCTTCCTGGGCATTCTGGATATTGCTG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCAGCTCAATACAAGGCTaGAGGTCCAGGCCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFSSIQG*RSRPKS
Trigger: CGACTTCGGCCTGGACCTGCAGCCTTGTATTGAGCT...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCCACGGTGCGGAACATaGCCTTTTTGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFPRCGT*PFWSWR
Trigger: CCTCCAAGACCAAAAAGGGCATGTTCCGCACCGTGG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGGCTGTCAGCTGTTGCTaGCTCTTGGTGAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVAVSCC*LLVKAF
Trigger: AAAGGCCTTCACCAAGAGGCAGCAACAGCTGACAGC...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGCGCTCCTTGATCTTTTaGATCTCCTCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVRSLIF*ISSSLA
Trigger: GGCCAAGGAGGAGGAGATGCAAAAGATCAAGGAGCG...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATCTCTCAGCCTGTAGTTaGTGGCCCCGGTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDLSACS*WPRSSS
Trigger: AGAGGAAGACCGGGGCCAGCAACTACAGGCTGAGAG...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTCTTCCTCCTCCAGTTaGTCCTCCAGGTCTAGCATC +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGSSSSS*SSRSSI
Trigger: GATGCTAGACCTGGAGGAGCAACTGGAGGAGGAAGA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGTCTGCAATCTGGGCCTaGAAGTCAGCGATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVSAIWA*KSAICS
Trigger: TGAGCAGATCGCTGACTTGCAGGCCCAGATTGCAGA...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATCCCAGGTCTCGCTTCTaGTTCTCGGCCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDPRSRF*FSALFL
Trigger: CAGGAACAAGGCCGAGAAGCAGAAGCGAGACCTGGG...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTGTGAGTTCCTCCACTaGCTGTGTGTGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGCEFLH*LCVLLP
Trigger: AGGCAGAAGCACACACAGGCAGTGGAGGAACTCACA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTGTGTTCCACCTCCTaGTTCGCCTGGCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDLCSTS*FAWPRT
Trigger: TGTCCTGGGCCAGGCGAAGCAGGAGGTGGAACACAA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTTGGCCCTTGAGGGCCTaGATGTTGACCTCTAGCCGC +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVWPLRA*MLTSSR
Trigger: GCGGCTAGAGGTCAACATGCAGGCCCTCAAGGGCCA...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTCATGGCCTCCATGTTaGCCTGCTCTTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFSWPPC*PALPPA
Trigger: AGCTGGAGGAAGAGCAGGGCAACATGGAGGCCATGA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTCCCACACCAGCTTCTTaGCTACCCAGTCGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVPTPAS*LPSRPE
Trigger: CTCAGGCCGACTGGGTAGCCAAGAAGCTGGTGTGGG...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCAGTCAGCCTGTTCTTTaGTCTGAGCCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGSQPVL*SEPSAP
Trigger: TGGTGCAGAAGGCTCAGACCAAAGAACAGGCTGACT...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGTCATCTTGGCCATCTaGTCCAGCCCCACAATGCGG +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDVILAI*SSPTMR
Trigger: CCGCATTGTGGGGCTGGACCAGATGGCCAAGATGAC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCCCCATCACTGCACTTaGACTGCAGATCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFPHHCT*TADPAA
Trigger: AGCTGCAGGATCTGCAGTCCAAGTGCAGTGATGGGG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGCTGCCAGGTCCTCTTaGAGCTGCATGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVAARSS*SCMRSA
Trigger: GGCAGACCTCATGCAGCTCCAAGAGGACCTGGCAGC...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCGCTCAGCCTGCAGTGTaGCCTTGCGTACTCTATCAC +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFAQPAV*PCVLYH
Trigger: GTGATAGAGTACGCAAGGCCACACTGCAGGCTGAGC...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTGCCAGCTGCATCTTaGGCTCTGCAATCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDLPAAS*ALQSGP
Trigger: AGGCCCAGATTGCAGAGCTCAAGATGCAGCTGGCAA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGCCTCTTCAGCTGCTTaGCCTTGGTGTTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGASSAA*PWCFLS
Trigger: AGAAAGGAAACACCAAGGTCAAGCAGCTGAAGAGGC...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTCCTGCGGTTGGCGTTaGTGCGCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSSCGWR*CAGTPP
Trigger: AGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGA...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTGGCTTTGGTTCCATTaGAGTCTGAGTCCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFWLWFH*SLSPER
Trigger: ACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGATGGCGTTCGCTaGCAGGATCTCATAGCGTTG +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVGDGVR*QDLIAL
Trigger: CAACGCTATGAGATCCTGGCAGCGAACGCCATCCCC...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCGCTCCTTGATCTTTTaGATCTCCTCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFRSLIF*ISSSLA
Trigger: GGCCAAGGAGGAGGAGATGCAAAAGATCAAGGAGCG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCTGCATCTTGAGCTCTaGAATCTGGGCCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFLHLEL*NLGLQV
Trigger: GACTTGCAGGCCCAGATTGCAGAGCTCAAGATGCAG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTCACTGCACTTGGACTaGAGATCCTGCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDSLHLD*RSCSCT
Trigger: GGTGCAGCTGCAGGATCTGCAGTCCAAGTGCAGTGA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATCATTCTTCTGAGCCGTaGTGCGTTCTGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDHSSEP*CVLWPA
Trigger: AGCTGGCCACAGAACGCAGCACGGCTCAGAAGAATG...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTCGCTCATCCTCCACCTaGAGCAGGACCTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVRSSST*SRTSFS
Trigger: GCTAAAGGAGGTCCTGCTGCAGGTGGAGGATGAGCG...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGAGCTGCCTCTTCAGCTaGTTGACCTTGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVSCLFS*LTLVFP
Trigger: AGGAAACACCAAGGTCAAGCAGCTGAAGAGGCAGCT...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTATCATCTAGCTCCCGCTaGAGCTTCCTGCGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVSSSSR*SFLRLA
Trigger: CGCCAACCGCAGGAAGCTGCAGCGGGAGCTAGATGA...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTCTTTCTTGCCCTTGTaGGAGGATGCCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDSFLPL*EDATTA
Trigger: GGCTGTGGTGGCATCCTCCCACAAGGGCAAGAAAGA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGCTCATAGGTGGCCTTaGCTAAGGCCTCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDAHRWP*LRPRWQ
Trigger: TTGCCATCGAGGCCTTAGCCAAGGCCACCTATGAGC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATAGCTCTCAGTCATCTTaGCCATCTGGTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDSSQSS*PSGPAP
Trigger: TGGGGCTGGACCAGATGGCCAAGATGACTGAGAGCT...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACGTTCCTCCTCTAGGTaGGCCAGGACCCCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSERSSSR*ARTPVR
Trigger: CCGAACGGGGGTCCTGGCCCACCTAGAGGAGGAACG...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGACCTCCTGCTTCGCCTaGCCCAGGACACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVTSCFA*PRTRSS
Trigger: GGAGCTGCGTGTCCTGGGCCAGGCGAAGCAGGAGGT...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTCTCCAAGGCACGCTTaGACTTCTCCAGTTCATGCA +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGSPRHA*TSPVHA
Trigger: TGCATGAACTGGAGAAGTCCAAGCGTGCCTTGGAGA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGGCCCCCAGCCCTTCTaGAAGGAACAAATGAAGCCT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDGPQPF*KEQMKP
Trigger: AGGCTTCATTTGTTCCTTCCAGAAGGGCTGGGGGCC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCGCACAGAGGCCTCATTaGGGCACGTCAGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSAQRPH*GTSALP
Trigger: TGGCAGAGCTGACGTGCCTCAATGAGGCCTCTGTGC...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCAGGTCTAGCATCTGCTaGGCCATCTTCTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFRSSIC*AIFFLS
Trigger: TGAGAGGAAGAAGATGGCTCAGCAGATGCTAGACCT...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTCTTCCATCTCAGCTTTaGGCATCTTGTTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCLPSQL*ASCWSS
Trigger: AGAGGACCAACAAGATGCTCAAAGCTGAGATGGAAG...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGTTTTCGAAGCTGCTTaGTGGCTTCCTCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDVFEAA*WLPPSL
Trigger: AAGGGAGGGAGGAAGCCATCAAGCAGCTTCGAAAAC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATCCTGCGGTTGGCGTTaGTGCGCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSCGWR*CAGTPP
Trigger: AGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGTCTGGAAGGAACAAATaGAGCCTCGTTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVSGRNK*SLVSSP
Trigger: AGGAGAGGAAACGAGGCTTCATTTGTTCCTTCCAGA...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAAGGAAGGAGGCCCCCTaGCGATGGGTCTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGRKEAP*RWVLSK
Trigger: CTTGGACAAGACCCATCGGCAGGGGGCCTCCTTCCT...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCAGGAAGGAGGCCCCCTaGCGATGGGTCTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSRKEAP*RWVLSK
Trigger: CTTGGACAAGACCCATCGGCAGGGGGCCTCCTTCCT...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTCAGCAATATCCAGAATaGCCAGGAAGGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVQQYPE*PGRRPP
Trigger: AGGGGGCCTCCTTCCTGGGCATTCTGGATATTGCTG...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGCTGTCAGCTGTTGCTaGCTCTTGGTGAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDAVSCC*LLVKAF
Trigger: AAAGGCCTTCACCAAGAGGCAGCAACAGCTGACAGC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTAAGAGCCGCCACCATTaGCAGTTGCGGAGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVKSRHH*QLRSLR
Trigger: CCTTAAGCTCCGCAACTGGCAATGGTGGCGGCTCTT...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGTCTCTGCCTTCTGCTaGCGCTCCTTGATCTTTTGC +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDVSAFC*RSLIFC
Trigger: GCAAAAGATCAAGGAGCGGCAGCAGAAGGCAGAGAC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATCTTCAACTCAGTCTCTaGCTTCTGCTGCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDLQLSL*LLLPLL
Trigger: AAGGAGCGGCAGCAGAAGGCAGAGACTGAGTTGAAG...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGTCTCTGCCTGCAACTaGTCCTGCAGCAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVVSACN*SCSRVF
Trigger: GAAGACTCTGCTGCAGGAGCAGTTGCAGGCAGAGAC...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTACCCAGGTCTCGCTTCTaGTTCTCGGCCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVPRSRF*FSALFL
Trigger: CAGGAACAAGGCCGAGAAGCAGAAGCGAGACCTGGG...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTTGAACTGCTCCAGCTaGTCTGTGAGTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFLNCSS*SVSSST
Trigger: AGTGGAGGAACTCACAGAGCAGCTGGAGCAGTTCAA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTATTGTGTTCCACCTCCTaGTTCGCCTGGCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVLCSTS*FAWPRT
Trigger: TGTCCTGGGCCAGGCGAAGCAGGAGGTGGAACACAA...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTGGCGCTCCAGGTTTTaGTTAGCCTCCATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDWRSRF*LASISS
Trigger: TGAGGAGATGGAGGCTAAGCAAAACCTGGAGCGCCA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGACCTCGATGGTACTTaGAAAGTCCTGCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGDLDGT*KVLQLL
Trigger: AAGAAGCTGCAGGACTTTGCAAGTACCATCGAGGTC...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATAGGTCATCCAGCTCCTaGTGGAGCCTGTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDRSSSS*WSLFLV
Trigger: AACCAAGAACAGGCTCCAGCAGGAGCTGGATGACCT...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATGGCCCTTGAGGGCCTaGATGTTGACCTCTAGCCGC +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGWPLRA*MLTSSR
Trigger: GCGGCTAGAGGTCAACATGCAGGCCCTCAAGGGCCA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTAGCTGCCGCTGTAGCTaGCTCCTCTTCTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVSCRCS*LLFSSF
Trigger: GAATGAGGAGAAGAGGAGGCAGCTACAGCGGCAGCT...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTTTCCTTTCTCTGCCTaGTCCTTGTACTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFFPFSA*SLYCSA
Trigger: GGCAGAGCAGTACAAGGAGCAGGCAGAGAAAGGAAA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGGTGCACAGAATGGACTaGTCTTCACGATCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVVHRMD*SSRSCS
Trigger: GCTACAAGATCGTGAAGACCAGTCCATTCTGTGCAC...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTTTTCATCTTTTCCTTaGCTCCGGCGAGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGFSSFP*LRRAGS
Trigger: ACTACCTGCTCGCCGGAGCCAAGGAAAAGATGAAAA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTTTTCATCTTTTCCTTaGCTCCGGCGAGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCFSSFP*LRRAGS
Trigger: ACTACCTGCTCGCCGGAGCCAAGGAAAAGATGAAAA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACCAGTTCCTGCTTCTTaGCTGCCAACCGGACCCGCA +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGPVPAS*LPTGPA
Trigger: TGCGGGTCCGGTTGGCAGCCAAGAAGCAGGAACTGG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCCCAGTTCCTGCTTCTTaGCTGCCAACCGGACCCGCA +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSPVPAS*LPTGPA
Trigger: TGCGGGTCCGGTTGGCAGCCAAGAAGCAGGAACTGG...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTGAGCTCTGCAATCTaGGCCTGCAAGTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDLSSAI*ACKSAI
Trigger: GATCGCTGACTTGCAGGCCCAGATTGCAGAGCTCAA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTATCTCGGCCTTGTTCCTaGCAGCCCGCTCTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVSRPCS*QPALSL
Trigger: TAGACTCAGAGCGGGCTGCCAGGAACAAGGCCGAGA...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAACCTCCTGCTTCGCCTaGCCCAGGACACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKTSCFA*PRTRSS
Trigger: GGAGCTGCGTGTCCTGGGCCAGGCGAAGCAGGAGGT...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGCTTCTTTTCCAGATTaGATACCAGTTGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGASFPD*IPVAAG
Trigger: ACCAGCGGCAACTGGTATCCAATCTGGAAAAGAAGC...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTCTCATCCGCATACTTaGAGGAGATGTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGSHPHT*RRCSSP
Trigger: AGGAGAAGAACATCTCCTCCAAGTATGCGGATGAGA...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTTCATCTCTTCCATCTaGGTCTCCAAGGCACGCTTG +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFFISSI*VSKARL
Trigger: CAAGCGTGCCTTGGAGACCCAGATGGAAGAGATGAA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGCTGCCAGGTCCTCTTaGAGCTGCATGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGAARSS*SCMRSA
Trigger: GGCAGACCTCATGCAGCTCCAAGAGGACCTGGCAGC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGGCACAGAGGCCTCATTaGGGCACGTCAGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVAQRPH*GTSALP
Trigger: TGGCAGAGCTGACGTGCCTCAATGAGGCCTCTGTGC...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGTCCCAGCATAGTGGATaGTGGAGAACTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVSQHSG*WRTLFC
Trigger: ACAAAACAGAGTTCTCCATCATCCACTATGCTGGGA...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATCCTCACCTCCAGCTCTaGGATCATAGACTCATGCTT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDPHLQL*DHRLML
Trigger: AAGCATGAGTCTATGATCTCAGAGCTGGAGGTGAGG...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTCTGGAAGGAACAAATaGAGCCTCGTTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFSGRNK*SLVSSP
Trigger: AGGAGAGGAAACGAGGCTTCATTTGTTCCTTCCAGA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGCCCTTGTGGGAGGATaGCACCACAGCCAAGTACTG +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGALVGG*HHSQVL
Trigger: CAGTACTTGGCTGTGGTGGCATCCTCCCACAAGGGC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAGGTCAGCCAGGCACTTaGATTGTAGTCCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVGQPGT*IVVHLP
Trigger: GGGAAGGTGGACTACAATGCAAGTGCCTGGCTGACC...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGGGTCCAGCCCCACAATaGGGTCCACATCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKGPAPQ*GPHPST
Trigger: TGTGGAAGGATGTGGACCGCATTGTGGGGCTGGACC...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGAGCCCTGACGGCAGATaGGGATGCCTTCCAACACAC +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKSPDGR*GCLPTH
Trigger: GTGTGTTGGAAGGCATCCGCATCTGCCGTCAGGGCT...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTATGAGAATGCAGGCTTaGTTTCCATCCATGAAGCCT +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCMRMQA*FPSMKP
Trigger: AGGCTTCATGGATGGAAAGCAAGCCTGCATTCTCAT...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACTCTCAGCCTGTAGTTaGTGGCCCCGGTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGLSACS*WPRSSS
Trigger: AGAGGAAGACCGGGGCCAGCAACTACAGGCTGAGAG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCGAGATCATAGACTCATaGTTGCTCTTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGEIIDS*LLFSFV
Trigger: CACAAAGCTGAAGAGCAAGCATGAGTCTATGATCTC...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTCTTTCTTTGCCAGCTaGATCTTGAGCTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCSFFAS*ILSSAI
Trigger: GATTGCAGAGCTCAAGATGCAGCTGGCAAAGAAAGA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACCCAGGTCTCGCTTCTaGTTCTCGGCCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGPRSRF*FSALFL
Trigger: CAGGAACAAGGCCGAGAAGCAGAAGCGAGACCTGGG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATTGGCTCTGAGCTCCTaGTGGGTAGCTGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGLALSS*WVAVLS
Trigger: GGACAGCACAGCTACCCAGCAGGAGCTCAGAGCCAA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTCCTTCTCCAGTGTCTaGTTGCTTTTGTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGSFSSV*LLLSRF
Trigger: AAACCTGGACAAAAGCAAGCAGACACTGGAGAAGGA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGCATCCTCAGTGGCCTaGAGCTCATCCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGASSVA*SSSSNS
Trigger: GGAGTTGGAGGATGAGCTGCAGGCCACTGAGGATGC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATCATCTAGCTCCCGCTaGAGCTTCCTGCGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSSSSR*SFLRLA
Trigger: CGCCAACCGCAGGAAGCTGCAGCGGGAGCTAGATGA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACCCACACCAGCTTCTTaGCTACCCAGTCGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKPTPAS*LPSRPE
Trigger: CTCAGGCCGACTGGGTAGCCAAGAAGCTGGTGTGGG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGTCATCTTGGCCATCTaGTCCAGCCCCACAATGCGG +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGVILAI*SSPTMR
Trigger: CCGCATTGTGGGGCTGGACCAGATGGCCAAGATGAC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAGCTCTCAGTCATCTTaGCCATCTGGTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVSSQSS*PSGPAP
Trigger: TGGGGCTGGACCAGATGGCCAAGATGACTGAGAGCT...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTTCTGGATCACCTTCATaGCTGTCAGCTGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVSGSPS*LSAVAA
Trigger: GGCAGCAACAGCTGACAGCCATGAAGGTGATCCAGA...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTGTCACCTGGAGCAATaGCTTTACTTTGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCCHLEQ*LYFGEE
Trigger: CTCTTCACCAAAGTAAAGCCATTGCTCCAGGTGACA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGAGGGCATTGTTTTTCTaGGCGATCTCTTCATCAAGC +
Preference number: 4 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVRALFF*AISSSS
Trigger: GCTTGATGAAGAGATCGCCCAGAAAAACAATGCCCT...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATCTCGGCCTTGTTCCTaGCAGCCCGCTCTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGSRPCS*QPALSL
Trigger: TAGACTCAGAGCGGGCTGCCAGGAACAAGGCCGAGA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTATGCCGGGTTTCTTCTTaGAGCAGCTCTTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVCRVSS*SSSWVS
Trigger: GGACACCCAAGAGCTGCTCCAAGAAGAAACCCGGCA...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACCTCTAGCCGCAGCTTaGCATCCTCAGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKPLAAA*HPQWPA
Trigger: TGCAGGCCACTGAGGATGCCAAGCTGCGGCTAGAGG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTTTTGCTTCAGCGACTTaGTGGCCGCCTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVFASAT*WPPVSL
Trigger: GAGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAAA...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCACTTCTCATCATCGCTaGGCTGCCCTTTCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSTSHHR*AALSAP
Trigger: TGGCGCAGAAAGGGCAGCTCAGCGATGATGAGAAGT...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTGTTTCGCTCCTTCTTaGAGACAATGTTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGCFAPS*RQCFQA
Trigger: AGCTTGGAAACATTGTCTTCAAGAAGGAGCGAAACA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGTTGCCAGCTGCATCTTaGGCTCTGCAATCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKLPAAS*ALQSGP
Trigger: AGGCCCAGATTGCAGAGCTCAAGATGCAGCTGGCAA...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAAGCTCTTGGGTGTCCTaGAGCTGGGATCCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGSSWVS*SWDPRE
Trigger: TTCCCTTGGATCCCAGCTTCAGGACACCCAAGAGCT...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTCTTCTTCTTAGAGTCTaGGAGCTGAATGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCLLLRV*ELNVQC
Trigger: ACACTGAACATTCAGCTCTCAGACTCTAAGAAGAAG...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTTGGAAGTCCTTCATCTaGGCCTGCAGTTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVWKSFI*ACSFRS
Trigger: GCTTCGAAAACTGCAGGCTCAGATGAAGGACTTCCA...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAGCGCTCTCATTCTTCTaGGCCGTGCTGCGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKALSFF*AVLRSV
Trigger: CACAGAACGCAGCACGGCTCAGAAGAATGAGAGCGC...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGCCTCTTCAGCTGCTTaGCCTTGGTGTTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVASSAA*PWCFLS
Trigger: AGAAAGGAAACACCAAGGTCAAGCAGCTGAAGAGGC...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGACTCCTTGATGCTGGCTaGTTCGAAGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGLLDAG*FEALLL
Trigger: GAGAAGCAGGGCTTCGAAGCAGCCAGCATCAAGGAG...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCAGCTCAATACAAGGCTaGAGGTCCAGGCCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSSSIQG*RSRPKS
Trigger: CGACTTCGGCCTGGACCTGCAGCCTTGTATTGAGCT...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAGGTCCAGCCCCACAATaGGGTCCACATCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEGPAPQ*GPHPST
Trigger: TGTGGAAGGATGTGGACCGCATTGTGGGGCTGGACC...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCCCACGGTGCGGAACATaGCCTTTTTGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSPRCGT*PFWSWR
Trigger: CCTCCAAGACCAAAAAGGGCATGTTCCGCACCGTGG...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAAGCCCTGACGGCAGATaGGGATGCCTTCCAACACAC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSESPDGR*GCLPTH
Trigger: GTGTGTTGGAAGGCATCCGCATCTGCCGTCAGGGCT...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAGGGGATGGCGTTCGCTaGCAGGATCTCATAGCGTTG +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKGDGVR*QDLIAL
Trigger: CAACGCTATGAGATCCTGGCAGCGAACGCCATCCCC...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTTCGGAAGAAGATTTTaGTCTGCCCAATCCTGTACA +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCFGRRF*SAQSCT
Trigger: TGTACAGGATTGGGCAGAGCAAAATCTTCTTCCGAA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAGTAGCCACGACACATTaGCTGGAAGGCCATGATGAC +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVVATTH*LEGHDD
Trigger: GTCATCATGGCCTTCCAGGCAATGTGTCGTGGCTAC...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAGTCTCTGCCTTCTGCTaGCGCTCCTTGATCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVVSAFC*RSLIFC
Trigger: GCAAAAGATCAAGGAGCGGCAGCAGAAGGCAGAGAC...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTTCAGTCTCTGCCTTCTaGTGCCGCTCCTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVSVSAF*CRSLIF
Trigger: AAAGATCAAGGAGCGGCAGCAGAAGGCAGAGACTGA...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTTCCTGCTTCTTGGCTaGCAACCGGACCCGCATCTC +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVFLLLG*QPDPHL
Trigger: GAGATGCGGGTCCGGTTGGCAGCCAAGAAGCAGGAA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTCCTTCTCCAGTGTCTaGTTGCTTTTGTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFSFSSV*LLLSRF
Trigger: AAACCTGGACAAAAGCAAGCAGACACTGGAGAAGGA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTTGTGTTCCACCTCCTaGTTCGCCTGGCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVLCSTS*FAWPRT
Trigger: TGTCCTGGGCCAGGCGAAGCAGGAGGTGGAACACAA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATTGGACTGCAGATCCTaGAGCTGCACCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGLDCRS*SCTSSF
Trigger: GAAGCTGGAGGTGCAGCTGCAGGATCTGCAGTCCAA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGTTGGACTGCAGATCCTaGAGCTGCACCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKLDCRS*SCTSSF
Trigger: GAAGCTGGAGGTGCAGCTGCAGGATCTGCAGTCCAA...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACACGCTCCCCATCACTaGACTTGGACTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGHAPHH*TWTADP
Trigger: AGGATCTGCAGTCCAAGTGCAGTGATGGGGAGCGTG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGACACATTGAGCTTCTaGCGGGTTTCTTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVDTLSF*RVSSWS
Trigger: GCTCCAAGAAGAAACCCGGCAGAAGCTCAATGTGTC...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTTCATCCAGCTGGTCCTaGAGGCTGTTCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVSSSWS*RLFLSS
Trigger: AGATGAAAGGAACAGCCTGCAGGACCAGCTGGATGA...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGTACTTGCAAAGTCCTaGAGCTTCTTCTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCVLAKS*SFFLES
Trigger: AGACTCTAAGAAGAAGCTGCAGGACTTTGCAAGTAC...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAGGTCATCCAGCTCCTaGTGGAGCCTGTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVRSSSS*WSLFLV
Trigger: AACCAAGAACAGGCTCCAGCAGGAGCTGGATGACCT...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGAGGTCCTCTTGGAGCTaGATGAGGTCTGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKRSSWS*MRSASR
Trigger: TCTGGAGGCAGACCTCATGCAGCTCCAAGAGGACCT...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATCATGGCCTCCATGTTaGCCTGCTCTTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGSWPPC*PALPPA
Trigger: AGCTGGAGGAAGAGCAGGGCAACATGGAGGCCATGA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCGGCCCATGGCCTCATTaGTCTCTGTGGCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSGPWPH*SLWPHL
Trigger: TAGATGAGGCCACAGAGAGCAATGAGGCCATGGGCC...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGGCCCATGGCCTCATTaGTCTCTGTGGCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGGPWPH*SLWPHL
Trigger: TAGATGAGGCCACAGAGAGCAATGAGGCCATGGGCC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGTCGGCCTGAGCCATTaGGCTGTTCATGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDVGLSH*AVHEVF
Trigger: AAAAACTTCATGAACAGCCCAATGGCTCAGGCCGAC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATCTTTCTTGCCCTTGTaGGAGGATGCCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGSFLPL*EDATTA
Trigger: GGCTGTGGTGGCATCCTCCCACAAGGGCAAGAAAGA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTATCAGGCATGGATGCCTaGTCTGTGTTTCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVSGMDA*SVFRSF
Trigger: GAAGGAGCGAAACACAGACCAGGCATCCATGCCTGA...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATCTGTGTTATCAGGCATaGATGCCTGGTCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDLCYQA*MPGLCF
Trigger: GAAACACAGACCAGGCATCCATGCCTGATAACACAG...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGCTCATAGGTGGCCTTaGCTAAGGCCTCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGAHRWP*LRPRWQ
Trigger: TTGCCATCGAGGCCTTAGCCAAGGCCACCTATGAGC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCGCGGGTCCATGTTCTTaGTCAGCCAGGCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSAGPCS*SARHLH
Trigger: ATGCAAGTGCCTGGCTGACCAAGAACATGGACCCGC...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGCGGGTCCATGTTCTTaGTCAGCCAGGCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGAGPCS*SARHLH
Trigger: ATGCAAGTGCCTGGCTGACCAAGAACATGGACCCGC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGTGGTCTTGGAGGCACTaGGCAGTGAGCTCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKWSWRH*AVSSQS
Trigger: TGACTGAGAGCTCACTGCCCAGTGCCTCCAAGACCA...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTCAGCCTGTAGTTGCTaGCCCCGGTCTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVSACSC*PRSSSS
Trigger: GGAAGAGGAAGACCGGGGCCAGCAACTACAGGCTGA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGCTTCTTTTCCAGATTaGATACCAGTTGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDASFPD*IPVAAG
Trigger: ACCAGCGGCAACTGGTATCCAATCTGGAAAAGAAGC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTCTCATCCGCATACTTaGAGGAGATGTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFSHPHT*RRCSSP
Trigger: AGGAGAAGAACATCTCCTCCAAGTATGCGGATGAGA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTTCTCCAAGGCACGCTTaGACTTCTCCAGTTCATGCA +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVSPRHA*TSPVHA
Trigger: TGCATGAACTGGAGAAGTCCAAGCGTGCCTTGGAGA...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTATGGCTGAGTCAGCCTaGAGCTCTAGGTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVMAESA*SSRSFR
Trigger: CCTAAAAGACCTAGAGCTCCAGGCTGACTCAGCCAT...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTACAAAGATCTCATCCCTaGAGGCACGGGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVQRSHP*RHGHHP
Trigger: TGGATGATGCCCGTGCCTCCAGGGATGAGATCTTTG...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCATTCTCTTTTGAGGTaGCAAAGATCTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFHSLLR*QRSHPW
Trigger: CCAGGGATGAGATCTTTGCCACCTCAAAAGAGAATG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGCTGCCAGGTCCTCTTaGAGCTGCATGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKAARSS*SCMRSA
Trigger: GGCAGACCTCATGCAGCTCCAAGAGGACCTGGCAGC...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGGCTCAGCCTGCAGTGTaGCCTTGCGTACTCTATCAC +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKAQPAV*PCVLYH
Trigger: GTGATAGAGTACGCAAGGCCACACTGCAGGCTGAGC...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGCTCAGCCTGCAGTGTaGCCTTGCGTACTCTATCAC +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGAQPAV*PCVLYH
Trigger: GTGATAGAGTACGCAAGGCCACACTGCAGGCTGAGC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAGCTTCAGCGACTTGGTaGCCGCCTGTTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKASATW*PPVSLW
Trigger: CCAGAGAGAAACAGGCGGCCACCAAGTCGCTGAAGC...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGGGCCCCCAGCCCTTCTaGAAGGAACAAATGAAGCCT +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKGPQPF*KEQMKP
Trigger: AGGCTTCATTTGTTCCTTCCAGAAGGGCTGGGGGCC...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGCCATTGGGCTGTTCATaGAGTTTTTATCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGPLGCS*SFYPQR
Trigger: TCTTTGTGGATAAAAACTTCATGAACAGCCCAATGG...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAGGTACTTGTAGGGGTTaGCCACCACACAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKGTCRG*PPHRRG
Trigger: GCCTCTTCTGTGTGGTGGTCAACCCCTACAAGTACC...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATTTCCAGCTCCCCCGTaGTGCTGCTGTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEFPAPP*CCCLSC
Trigger: GCAAGAAAGACAGCAGCATCACGGGGGAGCTGGAAA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATCTGCTGCCGCTCCTTaGTCTTTTGCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGSAAAP*SFASPP
Trigger: AGGAGGAGATGCAAAAGATCAAGGAGCGGCAGCAGA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTTGCCAGCTGCATCTTaGGCTCTGCAATCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVLPAAS*ALQSGP
Trigger: AGGCCCAGATTGCAGAGCTCAAGATGCAGCTGGCAA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATTGCCTTGGCCCTTTTaGACTGCTCCAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSELPWPF*TAPAAL
Trigger: CAGAGCAGCTGGAGCAGTTCAAAAGGGCCAAGGCAA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGACATCTTTGGCCAGTTTaGTGGCTTTGCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGHLWPV*WLCPLP
Trigger: AGGCAGAGGGCAAAGCCATCAAACTGGCCAAAGATG...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGTCTTCCCCTCCTCCATaGCCTCGATGGTACTTGCAA +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKSSPPP*PRWYLQ
Trigger: TTGCAAGTACCATCGAGGTCATGGAGGAGGGGAAGA...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGTTTTCGAAGCTGCTTaGTGGCTTCCTCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGVFEAA*WLPPSL
Trigger: AAGGGAGGGAGGAAGCCATCAAGCAGCTTCGAAAAC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACTCCTTGATGCTGGCTaGTTCGAAGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSELLDAG*FEALLL
Trigger: GAGAAGCAGGGCTTCGAAGCAGCCAGCATCAAGGAG...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATTTGCCTGTAGAAGCTaGTTTTCCAGCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGFACRS*FSSSPV
Trigger: CACGGGGGAGCTGGAAAAGCAGCTTCTACAGGCAAA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR GCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACAGCAATATCCAGAATaGCCAGGAAGGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKQQYPE*PGRRPP
Trigger: AGGGGGCCTCCTTCCTGGGCATTCTGGATATTGCTG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGGGTCAGCCAGGCACTTaGATTGTAGTCCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVGQPGT*IVVHLP
Trigger: GGGAAGGTGGACTACAATGCAAGTGCCTGGCTGACC...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCACGGTGCGGAACATaGCCTTTTTGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEPRCGT*PFWSWR
Trigger: CCTCCAAGACCAAAAAGGGCATGTTCCGCACCGTGG...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAATGGCTGTCAGCTGTTaGTGCCTCTTGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKMAVSC*CLLVKA
Trigger: GGCCTTCACCAAGAGGCAGCAACAGCTGACAGCCAT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGAAGAGCCGCCACCATTaGCAGTTGCGGAGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVKSRHH*QLRSLR
Trigger: CCTTAAGCTCCGCAACTGGCAATGGTGGCGGCTCTT...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACTTCAACTCAGTCTCTaGCTTCTGCTGCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGLQLSL*LLLPLL
Trigger: AAGGAGCGGCAGCAGAAGGCAGAGACTGAGTTGAAG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGGCCTGCAACTGCTCCTaGAGCAGAGTCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVACNCS*SRVFSS
Trigger: TGAGGAGAAGACTCTGCTGCAGGAGCAGTTGCAGGC...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGGTCTCTGCCTGCAACTaGTCCTGCAGCAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVVSACN*SCSRVF
Trigger: GAAGACTCTGCTGCAGGAGCAGTTGCAGGCAGAGAC...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTCTGCAATCTGGGCCTaGAAGTCAGCGATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSSAIWA*KSAICS
Trigger: TGAGCAGATCGCTGACTTGCAGGCCCAGATTGCAGA...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCCTGCATCTTGAGCTCTaGAATCTGGGCCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSLHLEL*NLGLQV
Trigger: GACTTGCAGGCCCAGATTGCAGAGCTCAAGATGCAG...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGTTGGCTCTGAGCTCCTaGTGGGTAGCTGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVLALSS*WVAVLS
Trigger: GGACAGCACAGCTACCCAGCAGGAGCTCAGAGCCAA...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGTGAGTTCCTCCACTaGCTGTGTGTGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSCEFLH*LCVLLP
Trigger: AGGCAGAAGCACACACAGGCAGTGGAGGAACTCACA...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGACCTCGATGGTACTTaGAAAGTCCTGCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVDLDGT*KVLQLL
Trigger: AAGAAGCTGCAGGACTTTGCAAGTACCATCGAGGTC...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACTTTTCCCTGGCCTCTaGTTCAGCTCGGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSELFPGL*FSSVSL
Trigger: GAGAGAGACCGAGCTGAAGCAGAGGCCAGGGAAAAG...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAAGCTGCCGCTGTAGCTaGCTCCTCTTCTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSCRCS*LLFSSF
Trigger: GAATGAGGAGAAGAGGAGGCAGCTACAGCGGCAGCT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACGGCGCTTCTCATCCTaGAGTGTATTCCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGRRFSS*SVFLPD
Trigger: GTCAGGAAGGAATACACTGCAGGATGAGAAGCGCCG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCCGGCGCTTCTCATCCTaGAGTGTATTCCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSRRFSS*SVFLPD
Trigger: GTCAGGAAGGAATACACTGCAGGATGAGAAGCGCCG...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTCATGGCCTCCATGTTaGCCTGCTCTTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVSWPPC*PALPPA
Trigger: AGCTGGAGGAAGAGCAGGGCAACATGGAGGCCATGA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACTGTGGCCAGCTCATTaGTCAGTTGCTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSELWPAH*SVAQPA
Trigger: TGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAG...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATCTTCTGAGCCGTGCTaGGTTCTGTGGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSSEPC*VLWPAH
Trigger: ATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACATTCTTCTGAGCCGTaGTGCGTTCTGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEHSSEP*CVLWPA
Trigger: AGCTGGCCACAGAACGCAGCACGGCTCAGAAGAATG...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTCTACCTCCTGCAACTTaGTTCGCAGTTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVLPPAT*FAVPCS
Trigger: AGAACAAGGAACTGCGAAGCAAGTTGCAGGAGGTAG...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAGCTTCTTGTCCTTTTaGTTCAGCGACTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVSFLSF*FSDLVA
Trigger: GGCCACCAAGTCGCTGAAGCAAAAGGACAAGAAGCT...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATCTTTCTTGCCCTTGTaGGAGGATGCCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSFLPL*EDATTA
Trigger: GGCTGTGGTGGCATCCTCCCACAAGGGCAAGAAAGA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTGGGCACAAAGCCATTaGATAAAAATGTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGWAQSH*IKMCSC
Trigger: ACAGCTACACATTTTTATCCAATGGCTTTGTGCCCA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATCAGGCATGGATGCCTaGTCTGTGTTTCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGSGMDA*SVFRSF
Trigger: GAAGGAGCGAAACACAGACCAGGCATCCATGCCTGA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAGTCAGCCTGTTCTTTaGTCTGAGCCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVSQPVL*SEPSAP
Trigger: TGGTGCAGAAGGCTCAGACCAAAGAACAGGCTGACT...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGAGCTCTCAGTCATCTTaGCCATCTGGTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVSSQSS*PSGPAP
Trigger: TGGGGCTGGACCAGATGGCCAAGATGACTGAGAGCT...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAGGAACATGCCCTTTTTaGTCTTGGAGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGGTCPF*SWRHWA
Trigger: TGCCCAGTGCCTCCAAGACCAAAAAGGGCATGTTCC...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTACCACGACACATTGCCTaGAAGGCCATGATGACATCA +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVPRHIA*KAMMTS
Trigger: TGATGTCATCATGGCCTTCCAGGCAATGTGTCGTGG...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTATCCTGCCGTGTCACCTaGAGCAATGGCTTTACTTTG +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVSCRVT*SNGFTL
Trigger: CAAAGTAAAGCCATTGCTCCAGGTGACACGGCAGGA...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGTCAGCGATCTGCTCATaGAAGTCACTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKSAICS*KSLASP
Trigger: GGGTGATGCCAGTGACTTCCATGAGCAGATCGCTGA...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTGGACCTGGGCCTCATaGGACCGCGTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFWTWAS*DRVSSS
Trigger: GGATGAGGAGACGCGGTCCCATGAGGCCCAGGTCCA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACCCCATCACTGCACTTaGACTGCAGATCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKPHHCT*TADPAA
Trigger: AGCTGCAGGATCTGCAGTCCAAGTGCAGTGATGGGG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATGCCGGGTTTCTTCTTaGAGCAGCTCTTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSECRVSS*SSSWVS
Trigger: GGACACCCAAGAGCTGCTCCAAGAAGAAACCCGGCA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTCCTCAGCTAACAACTaGTCAAATTTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCSSANN*SNFFCF
Trigger: GAAGCAGAAGAAATTTGACCAGTTGTTAGCTGAGGA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTCCTCAGCTAACAACTaGTCAAATTTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGSSANN*SNFFCF
Trigger: GAAGCAGAAGAAATTTGACCAGTTGTTAGCTGAGGA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATTGTCTCCTTTTCCCTaGCCTCTGCTTCAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGLSPFP*PLLQLG
Trigger: ACCGAGCTGAAGCAGAGGCCAGGGAAAAGGAGACAA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATTGTCTCCTTTTCCCTaGCCTCTGCTTCAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGLSPFP*PLLQLG
Trigger: ACCGAGCTGAAGCAGAGGCCAGGGAAAAGGAGACAA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGTTGTCTCCTTTTCCCTaGCCTCTGCTTCAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKLSPFP*PLLQLG
Trigger: ACCGAGCTGAAGCAGAGGCCAGGGAAAAGGAGACAA...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGCTTCAGCGACTTGGTaGCCGCCTGTTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKASATW*PPVSLW
Trigger: CCAGAGAGAAACAGGCGGCCACCAAGTCGCTGAAGC...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTTTGCTTCAGCGACTTaGTGGCCGCCTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSFASAT*WPPVSL
Trigger: GAGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAAA...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAATTGGCGTTGATGCGCTaGGACTCCTCCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKLALMR*DSSSAS
Trigger: AGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAA...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGCCTCATTGCTCTCTGTaGCCTCATCTAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVPHCSL*PHLAPA
Trigger: AGCGGGAGCTAGATGAGGCCACAGAGAGCAATGAGG...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATCATCTTTGCCAACTGTaGCCTTCTTTCCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDHLCQL*PSFHFP
Trigger: TGGAAAATGGAAAGAAGGTCACAGTTGGCAAAGATG...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGAGGTCTAGCATCTGCTaGGCCATCTTCTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKRSSIC*AIFFLS
Trigger: TGAGAGGAAGAAGATGGCTCAGCAGATGCTAGACCT...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGAAAGTTTACTGTTCTaGTCATCCATAACCAAGATG +
Preference number: 4 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCESLLF*SSITKM
Trigger: CATCTTGGTTATGGATGATCAGAACAGTAAACTTTC...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAACCTCCAGTTTCCTCTTaGGTTTCTCCAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKPPVSS*VSPAPA
Trigger: GGCAGGAGCTGGAGAAACTCAAGAGGAAACTGGAGG...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAATTGCCTTGGCCCTTTTaGACTGCTCCAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKLPWPF*TAPAAL
Trigger: CAGAGCAGCTGGAGCAGTTCAAAAGGGCCAAGGCAA...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGCATCTTTGGCCAGTTTaGTGGCTTTGCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVHLWPV*WLCPLP
Trigger: AGGCAGAGGGCAAAGCCATCAAACTGGCCAAAGATG...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTCTTCCCCTCCTCCATaGCCTCGATGGTACTTGCAA +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVSSPPP*PRWYLQ
Trigger: TTGCAAGTACCATCGAGGTCATGGAGGAGGGGAAGA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAAGATGGACCTTGCGTaGTGCTGCTGTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGKMDLA*CCCLSC
Trigger: GCAAGAAAGACAGCAGCATCACGCAAGGTCCATCTT...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGACTCCAGACTCACCTGTaGACAGAATGGACTGGTCTT +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGLQTHL*TEWTGL
Trigger: AAGACCAGTCCATTCTGTGCACAGGTGAGTCTGGAG...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTGCTGCTGTCTTTCTTaGCCTTGTGGGAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVCCCLS*PCGRMP
Trigger: TGGCATCCTCCCACAAGGGCAAGAAAGACAGCAGCA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATTTGCCTGTAGAAGCTaGTTTTCCAGCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEFACRS*FSSSPV
Trigger: CACGGGGGAGCTGGAAAAGCAGCTTCTACAGGCAAA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGTTATCAGGCATGGATaGCTGGTCTGTGTTTCGCTC +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGVIRHG*LVCVSL
Trigger: GAGCGAAACACAGACCAGGCATCCATGCCTGATAAC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCGTTATCAGGCATGGATaGCTGGTCTGTGTTTCGCTC +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSVIRHG*LVCVSL
Trigger: GAGCGAAACACAGACCAGGCATCCATGCCTGATAAC...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAGTAGCCACGACACATTaGCTGGAAGGCCATGATGAC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEVATTH*LEGHDD
Trigger: GTCATCATGGCCTTCCAGGCAATGTGTCGTGGCTAC...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGGCTGTCAGCTGTTGCTaGCTCTTGGTGAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVAVSCC*LLVKAF
Trigger: AAAGGCCTTCACCAAGAGGCAGCAACAGCTGACAGC...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAAAGAGCCGCCACCATTaGCAGTTGCGGAGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKKSRHH*QLRSLR
Trigger: CCTTAAGCTCCGCAACTGGCAATGGTGGCGGCTCTT...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACGCTCCTTGATCTTTTaGATCTCCTCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKRSLIF*ISSSLA
Trigger: GGCCAAGGAGGAGGAGATGCAAAAGATCAAGGAGCG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAGTCTCTGCCTTCTGCTaGCGCTCCTTGATCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEVSAFC*RSLIFC
Trigger: GCAAAAGATCAAGGAGCGGCAGCAGAAGGCAGAGAC...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATCAGTCTCTGCCTTCTaGTGCCGCTCCTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGSVSAF*CRSLIF
Trigger: AAAGATCAAGGAGCGGCAGCAGAAGGCAGAGACTGA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATCAGTCTCTGCCTTCTaGTGCCGCTCCTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGSVSAF*CRSLIF
Trigger: AAAGATCAAGGAGCGGCAGCAGAAGGCAGAGACTGA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGCCTGCAACTGCTCCTaGAGCAGAGTCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVACNCS*SRVFSS
Trigger: TGAGGAGAAGACTCTGCTGCAGGAGCAGTTGCAGGC...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATCTTCCTCCTCCAGTTaGTCCTCCAGGTCTAGCATC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSESSSSS*SSRSSI
Trigger: GATGCTAGACCTGGAGGAGCAACTGGAGGAGGAAGA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGTGCAAGTCAGCGATCTaGTCATGGAAGTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKCKSAI*SWKSLA
Trigger: TGCCAGTGACTTCCATGAGCAGATCGCTGACTTGCA...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATCTGCAATCTGGGCCTaGAAGTCAGCGATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSAIWA*KSAICS
Trigger: TGAGCAGATCGCTGACTTGCAGGCCCAGATTGCAGA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGCTGCATCTTGAGCTCTaGAATCTGGGCCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVLHLEL*NLGLQV
Trigger: GACTTGCAGGCCCAGATTGCAGAGCTCAAGATGCAG...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATGTGAGTTCCTCCACTaGCTGTGTGTGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSECEFLH*LCVLLP
Trigger: AGGCAGAAGCACACACAGGCAGTGGAGGAACTCACA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTTGAACTGCTCCAGCTaGTCTGTGAGTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSLNCSS*SVSSST
Trigger: AGTGGAGGAACTCACAGAGCAGCTGGAGCAGTTCAA...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAATCACTGCACTTGGACTaGAGATCCTGCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKSLHLD*RSCSCT
Trigger: GGTGCAGCTGCAGGATCTGCAGTCCAAGTGCAGTGA...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGCACGCTCCCCATCACTaGACTTGGACTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVHAPHH*TWTADP
Trigger: AGGATCTGCAGTCCAAGTGCAGTGATGGGGAGCGTG...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAAGGTCATCCAGCTCCTaGTGGAGCCTGTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKRSSSS*WSLFLV
Trigger: AACCAAGAACAGGCTCCAGCAGGAGCTGGATGACCT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGAGATTGGATACCAGTTaGCGCTGGTTGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKRLDTS*RWLSKS
Trigger: GGACTTGGACAACCAGCGGCAACTGGTATCCAATCT...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAACTTTTCCCTGGCCTCTaGTTCAGCTCGGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKLFPGL*FSSVSL
Trigger: GAGAGAGACCGAGCTGAAGCAGAGGCCAGGGAAAAG...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCGCGAGCTCTCTCAGCTaGTGCCAGGTCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFASSLS*CQVLLE
Trigger: CTCCAAGAGGACCTGGCAGCAGCTGAGAGAGCTCGC...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAAGCTTCTTGTCCTTTTaGTTCAGCGACTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGSFLSF*FSDLVA
Trigger: GGCCACCAAGTCGCTGAAGCAAAAGGACAAGAAGCT...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCGGTGTTTCCTTTCTCTaGCTGCTCCTTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSGVSFL*LLLVLL
Trigger: GAGCAGTACAAGGAGCAGGCAGAGAAAGGAAACACC...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGGCCCATGGCCTCATTaGTCTCTGTGGCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVGPWPH*SLWPHL
Trigger: TAGATGAGGCCACAGAGAGCAATGAGGCCATGGGCC...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGCTCATAGGTGGCCTTaGCTAAGGCCTCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKAHRWP*LRPRWQ
Trigger: TTGCCATCGAGGCCTTAGCCAAGGCCACCTATGAGC...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGCGGGTCCATGTTCTTaGTCAGCCAGGCACTTGCAT +
Preference number: 4 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVAGPCS*SARHLH
Trigger: ATGCAAGTGCCTGGCTGACCAAGAACATGGACCCGC...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATCTGGATCACCTTCATaGCTGTCAGCTGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSGSPS*LSAVAA
Trigger: GGCAGCAACAGCTGACAGCCATGAAGGTGATCCAGA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAGCTCATGGAAGTCACTaGCATCACCCTCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKAHGSH*HHPPVS
Trigger: GGAAACTGGAGGGTGATGCCAGTGACTTCCATGAGC...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATCAGCGATCTGCTCATaGAAGTCACTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSESAICS*KSLASP
Trigger: GGGTGATGCCAGTGACTTCCATGAGCAGATCGCTGA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATTGAGCTCTGCAATCTaGGCCTGCAAGTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKLSSAI*ACKSAI
Trigger: GATCGCTGACTTGCAGGCCCAGATTGCAGAGCTCAA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAACCCCATCACTGCACTTaGACTGCAGATCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKPHHCT*TADPAA
Trigger: AGCTGCAGGATCTGCAGTCCAAGTGCAGTGATGGGG...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATTCATCTCTTCCATCTaGGTCTCCAAGGCACGCTTG +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGFISSI*VSKARL
Trigger: CAAGCGTGCCTTGGAGACCCAGATGGAAGAGATGAA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTTCATCTCTTCCATCTaGGTCTCCAAGGCACGCTTG +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSFISSI*VSKARL
Trigger: CAAGCGTGCCTTGGAGACCCAGATGGAAGAGATGAA...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAATGGCTGAGTCAGCCTaGAGCTCTAGGTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGMAESA*SSRSFR
Trigger: CCTAAAAGACCTAGAGCTCCAGGCTGACTCAGCCAT...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACAAAGATCTCATCCCTaGAGGCACGGGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEQRSHP*RHGHHP
Trigger: TGGATGATGCCCGTGCCTCCAGGGATGAGATCTTTG...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGTACTCTATCACTCATaGCCTCCATGTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGVLYHS*PPCCPA
Trigger: AGCAGGGCAACATGGAGGCCATGAGTGATAGAGTAC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTTTGCTTCAGCGACTTaGTGGCCGCCTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVFASAT*WPPVSL
Trigger: GAGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAAA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTATCCCAGCATAGTGGATaGTGGAGAACTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVSQHSG*WRTLFC
Trigger: ACAAAACAGAGTTCTCCATCATCCACTATGCTGGGA...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAATCTGCTGCCGCTCCTTaGTCTTTTGCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKSAAAP*SFASPP
Trigger: AGGAGGAGATGCAAAAGATCAAGGAGCGGCAGCAGA...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAAGGTCTAGCATCTGCTaGGCCATCTTCTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKRSSIC*AIFFLS
Trigger: TGAGAGGAAGAAGATGGCTCAGCAGATGCTAGACCT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGCCTCACCTCCAGCTCTaGGATCATAGACTCATGCTT +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVPHLQL*DHRLML
Trigger: AAGCATGAGTCTATGATCTCAGAGCTGGAGGTGAGG...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCCTTCCATCTCAGCTTTaGGCATCTTGTTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSLPSQL*ASCWSS
Trigger: AGAGGACCAACAAGATGCTCAAAGCTGAGATGGAAG...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACTTCCATCTCAGCTTTaGGCATCTTGTTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGLPSQL*ASCWSS
Trigger: AGAGGACCAACAAGATGCTCAAAGCTGAGATGGAAG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAGCCTCTTCAGCTGCTTaGCCTTGGTGTTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEASSAA*PWCFLS
Trigger: AGAAAGGAAACACCAAGGTCAAGCAGCTGAAGAGGC...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACTCCAGACTCACCTGTaGACAGAATGGACTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSELQTHL*TEWTGL
Trigger: AAGACCAGTCCATTCTGTGCACAGGTGAGTCTGGAG...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCGCCCTTGTGGGAGGATaGCACCACAGCCAAGTACTG +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGALVGG*HHSQVL
Trigger: CAGTACTTGGCTGTGGTGGCATCCTCCCACAAGGGC...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCGGGGATGGCGTTCGCTaGCAGGATCTCATAGCGTTG +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGGDGVR*QDLIAL
Trigger: CAACGCTATGAGATCCTGGCAGCGAACGCCATCCCC...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTAGCCACGACACATTaGCTGGAAGGCCATGATGAC +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKVATTH*LEGHDD
Trigger: GTCATCATGGCCTTCCAGGCAATGTGTCGTGGCTAC...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATGCAAGTCAGCGATCTaGTCATGGAAGTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSECKSAI*SWKSLA
Trigger: TGCCAGTGACTTCCATGAGCAGATCGCTGACTTGCA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTTGGCTCTGAGCTCCTaGTGGGTAGCTGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGLALSS*WVAVLS
Trigger: GGACAGCACAGCTACCCAGCAGGAGCTCAGAGCCAA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATTGAACTGCTCCAGCTaGTCTGTGAGTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKLNCSS*SVSSST
Trigger: AGTGGAGGAACTCACAGAGCAGCTGGAGCAGTTCAA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAGACACATTGAGCTTCTaGCGGGTTTCTTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEDTLSF*RVSSWS
Trigger: GCTCCAAGAAGAAACCCGGCAGAAGCTCAATGTGTC...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGCGGCGCTTCTCATCCTaGAGTGTATTCCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVRRFSS*SVFLPD
Trigger: GTCAGGAAGGAATACACTGCAGGATGAGAAGCGCCG...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGCTACCTCCTGCAACTTaGTTCGCAGTTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKLPPAT*FAVPCS
Trigger: AGAACAAGGAACTGCGAAGCAAGTTGCAGGAGGTAG...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACTACCTCCTGCAACTTaGTTCGCAGTTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGLPPAT*FAVPCS
Trigger: AGAACAAGGAACTGCGAAGCAAGTTGCAGGAGGTAG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCCGCTCATCCTCCACCTaGAGCAGGACCTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFRSSST*SRTSFS
Trigger: GCTAAAGGAGGTCCTGCTGCAGGTGGAGGATGAGCG...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAGGTGTTTCCTTTCTCTaGCTGCTCCTTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEGVSFL*LLLVLL
Trigger: GAGCAGTACAAGGAGCAGGCAGAGAAAGGAAACACC...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGAGCTGCCTCTTCAGCTaGTTGACCTTGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVSCLFS*LTLVFP
Trigger: AGGAAACACCAAGGTCAAGCAGCTGAAGAGGCAGCT...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGACACCTGTGCACAGAATaGACTGGTCTTCACGATCTT +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGHLCTE*TGLHDL
Trigger: AAGATCGTGAAGACCAGTCCATTCTGTGCACAGGTG...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCCACCTGTGCACAGAATaGACTGGTCTTCACGATCTT +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSHLCTE*TGLHDL
Trigger: AAGATCGTGAAGACCAGTCCATTCTGTGCACAGGTG...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTGGGCACAAAGCCATTaGATAAAAATGTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDWAQSH*IKMCSC
Trigger: ACAGCTACACATTTTTATCCAATGGCTTTGTGCCCA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACTTGTGCAGCTGGGATaGGCACAAAGCCATTGGATA +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKLVQLG*AQSHWI
Trigger: TATCCAATGGCTTTGTGCCCATCCCAGCTGCACAAG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCATCATCTTGTGCAGCTaGGATGGGCACAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSIILCS*DGHKAI
Trigger: AATGGCTTTGTGCCCATCCCAGCTGCACAAGATGAT...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAATCATCTTGTGCAGCTaGGATGGGCACAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGIILCS*DGHKAI
Trigger: AATGGCTTTGTGCCCATCCCAGCTGCACAAGATGAT...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAAGTCAGCCTGTTCTTTaGTCTGAGCCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSQPVL*SEPSAP
Trigger: TGGTGCAGAAGGCTCAGACCAAAGAACAGGCTGACT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACCACGACACATTGCCTaGAAGGCCATGATGACATCA +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKPRHIA*KAMMTS
Trigger: TGATGTCATCATGGCCTTCCAGGCAATGTGTCGTGG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGCTCATGGAAGTCACTaGCATCACCCTCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKAHGSH*HHPPVS
Trigger: GGAAACTGGAGGGTGATGCCAGTGACTTCCATGAGC...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATGTAGGTCTGAGATATaGCCCTCTAGCTCGCGAATC +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKCRSEI*PSSSRI
Trigger: GATTCGCGAGCTAGAGGGCCATATCTCAGACCTACA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAATGGCTGAGTCAGCCTaGAGCTCTAGGTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEMAESA*SSRSFR
Trigger: CCTAAAAGACCTAGAGCTCCAGGCTGACTCAGCCAT...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTACATTCTCTTTTGAGGTaGCAAAGATCTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVHSLLR*QRSHPW
Trigger: CCAGGGATGAGATCTTTGCCACCTCAAAAGAGAATG...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTTGGCGTTGATGCGCTaGGACTCCTCCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFLALMR*DSSSAS
Trigger: AGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTTGGCGTTGATGCGCTaGGACTCCTCCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGLALMR*DSSSAS
Trigger: AGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCACTTCTCATCATCGCTaGGCTGCCCTTTCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFTSHHR*AALSAP
Trigger: TGGCGCAGAAAGGGCAGCTCAGCGATGATGAGAAGT...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAACCTCACCTCCAGCTCTaGGATCATAGACTCATGCTT +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKPHLQL*DHRLML
Trigger: AAGCATGAGTCTATGATCTCAGAGCTGGAGGTGAGG...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCCCTCCAGTTTCCTCTTaGGTTTCTCCAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFPPVSS*VSPAPA
Trigger: GGCAGGAGCTGGAGAAACTCAAGAGGAAACTGGAGG...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCAGCTCTTGGGTGTCCTaGAGCTGGGATCCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGSSWVS*SWDPRE
Trigger: TTCCCTTGGATCCCAGCTTCAGGACACCCAAGAGCT...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTACTTCTCATTCTCTTTTaGGGTGGCAAAGATCTCATC +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVLLILF*GGKDLI
Trigger: GATGAGATCTTTGCCACCTCAAAAGAGAATGAGAAG...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCAGCTCAATACAAGGCTaGAGGTCCAGGCCGAAGTCG +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFSSIQG*RSRPKS
Trigger: CGACTTCGGCCTGGACCTGCAGCCTTGTATTGAGCT...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTAAGAAGATTTTGCTCTaGCCAATCCTGTACAGGTTA +
Preference number: 4 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVKKILL*PILYRL
Trigger: TAACCTGTACAGGATTGGGCAGAGCAAAATCTTCTT...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATCTTTCTTTGCCAGCTaGATCTTGAGCTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGSFFAS*ILSSAI
Trigger: GATTGCAGAGCTCAAGATGCAGCTGGCAAAGAAAGA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAATTGGCCCTTTTGAACTaGTCCAGCTGCTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKLALLN*SSCSVS
Trigger: ACTCACAGAGCAGCTGGAGCAGTTCAAAAGGGCCAA...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTTGGACTGCAGATCCTaGAGCTGCACCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFLDCRS*SCTSSF
Trigger: GAAGCTGGAGGTGCAGCTGCAGGATCTGCAGTCCAA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTCACTGCACTTGGACTaGAGATCCTGCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFSLHLD*RSCSCT
Trigger: GGTGCAGCTGCAGGATCTGCAGTCCAAGTGCAGTGA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAGACCTCGATGGTACTTaGAAAGTCCTGCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEDLDGT*KVLQLL
Trigger: AAGAAGCTGCAGGACTTTGCAAGTACCATCGAGGTC...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAAGATTGGATACCAGTTaGCGCTGGTTGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKRLDTS*RWLSKS
Trigger: GGACTTGGACAACCAGCGGCAACTGGTATCCAATCT...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCAGGTCCTCTTGGAGCTaGATGAGGTCTGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFRSSWS*MRSASR
Trigger: TCTGGAGGCAGACCTCATGCAGCTCCAAGAGGACCT...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTCTTCTGAGCCGTGCTaGGTTCTGTGGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGSSEPC*VLWPAH
Trigger: ATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAAGCTTCTTGTCCTTTTaGTTCAGCGACTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKSFLSF*FSDLVA
Trigger: GGCCACCAAGTCGCTGAAGCAAAAGGACAAGAAGCT...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCGCCTGCTCCTTGTACTaGTCTGCCATCTTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFACSLY*SAILRS
Trigger: TGAGCGCAAGATGGCAGAGCAGTACAAGGAGCAGGC...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAGTCGGCCTGAGCCATTaGGCTGTTCATGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKVGLSH*AVHEVF
Trigger: AAAAACTTCATGAACAGCCCAATGGCTCAGGCCGAC...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGGTGCACAGAATGGACTaGTCTTCACGATCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVVHRMD*SSRSCS
Trigger: GCTACAAGATCGTGAAGACCAGTCCATTCTGTGCAC...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACACCTGTGCACAGAATaGACTGGTCTTCACGATCTT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKHLCTE*TGLHDL
Trigger: AAGATCGTGAAGACCAGTCCATTCTGTGCACAGGTG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATTTTCATCTTTTCCTTaGCTCCGGCGAGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKFSSFP*LRRAGS
Trigger: ACTACCTGCTCGCCGGAGCCAAGGAAAAGATGAAAA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGCTTGTGCAGCTGGGATaGGCACAAAGCCATTGGATA +
Preference number: 4 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVLVQLG*AQSHWI
Trigger: TATCCAATGGCTTTGTGCCCATCCCAGCTGCACAAG...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGATCATCTTGTGCAGCTaGGATGGGCACAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVIILCS*DGHKAI
Trigger: AATGGCTTTGTGCCCATCCCAGCTGCACAAGATGAT...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGCTGTGTTATCAGGCATaGATGCCTGGTCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVLCYQA*MPGLCF
Trigger: GAAACACAGACCAGGCATCCATGCCTGATAACACAG...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTGGTCTTGGAGGCACTaGGCAGTGAGCTCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFWSWRH*AVSSQS
Trigger: TGACTGAGAGCTCACTGCCCAGTGCCTCCAAGACCA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGAGGGCATTGTTTTTCTaGGCGATCTCTTCATCAAGC +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKRALFF*AISSSS
Trigger: GCTTGATGAAGAGATCGCCCAGAAAAACAATGCCCT...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAATGTAGGTCTGAGATATaGCCCTCTAGCTCGCGAATC +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKCRSEI*PSSSRI
Trigger: GATTCGCGAGCTAGAGGGCCATATCTCAGACCTACA...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAGCTTCTTTTCCAGATTaGATACCAGTTGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEASFPD*IPVAAG
Trigger: ACCAGCGGCAACTGGTATCCAATCTGGAAAAGAAGC...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACATTCTCTTTTGAGGTaGCAAAGATCTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGHSLLR*QRSHPW
Trigger: CCAGGGATGAGATCTTTGCCACCTCAAAAGAGAATG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTACTCTATCACTCATaGCCTCCATGTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVVLYHS*PPCCPA
Trigger: AGCAGGGCAACATGGAGGCCATGAGTGATAGAGTAC...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGTTTCGCTCCTTCTTaGAGACAATGTTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSCFAPS*RQCFQA
Trigger: AGCTTGGAAACATTGTCTTCAAGAAGGAGCGAAACA...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTCCCAGCATAGTGGATaGTGGAGAACTCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVSQHSG*WRTLFC
Trigger: ACAAAACAGAGTTCTCCATCATCCACTATGCTGGGA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGCTTCTCATTCTCTTTTaGGGTGGCAAAGATCTCATC +
Preference number: 4 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKLLILF*GGKDLI
Trigger: GATGAGATCTTTGCCACCTCAAAAGAGAATGAGAAG...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAGAGATCATAGACTCATaGTTGCTCTTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGEIIDS*LLFSFV
Trigger: CACAAAGCTGAAGAGCAAGCATGAGTCTATGATCTC...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTGGCGCTCCAGGTTTTaGTTAGCCTCCATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFWRSRF*LASISS
Trigger: TGAGGAGATGGAGGCTAAGCAAAACCTGGAGCGCCA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGTACTTGCAAAGTCCTaGAGCTTCTTCTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGVLAKS*SFFLES
Trigger: AGACTCTAAGAAGAAGCTGCAGGACTTTGCAAGTAC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTCGGCCTGAGCCATTaGGCTGTTCATGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKVGLSH*AVHEVF
Trigger: AAAAACTTCATGAACAGCCCAATGGCTCAGGCCGAC...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTGCACAGAATGGACTaGTCTTCACGATCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKVHRMD*SSRSCS
Trigger: GCTACAAGATCGTGAAGACCAGTCCATTCTGTGCAC...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTCAGGCATGGATGCCTaGTCTGTGTTTCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGSGMDA*SVFRSF
Trigger: GAAGGAGCGAAACACAGACCAGGCATCCATGCCTGA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCGGAACATGCCCTTTTTaGTCTTGGAGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFGTCPF*SWRHWA
Trigger: TGCCCAGTGCCTCCAAGACCAAAAAGGGCATGTTCC...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTCTGGATCACCTTCATaGCTGTCAGCTGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGSGSPS*LSAVAA
Trigger: GGCAGCAACAGCTGACAGCCATGAAGGTGATCCAGA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTGTCACCTGGAGCAATaGCTTTACTTTGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVCHLEQ*LYFGEE
Trigger: CTCTTCACCAAAGTAAAGCCATTGCTCCAGGTGACA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAAGGGCATTGTTTTTCTaGGCGATCTCTTCATCAAGC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSERALFF*AISSSS
Trigger: GCTTGATGAAGAGATCGCCCAGAAAAACAATGCCCT...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATCTCATCCGCATACTTaGAGGAGATGTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSHPHT*RRCSSP
Trigger: AGGAGAAGAACATCTCCTCCAAGTATGCGGATGAGA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACCATTGGGCTGTTCATaGAGTTTTTATCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGPLGCS*SFYPQR
Trigger: TCTTTGTGGATAAAAACTTCATGAACAGCCCAATGG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACATCTTTGCCAACTGTaGCCTTCTTTCCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEHLCQL*PSFHFP
Trigger: TGGAAAATGGAAAGAAGGTCACAGTTGGCAAAGATG...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAGCACAGAGGCCTCATTaGGGCACGTCAGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSAQRPH*GTSALP
Trigger: TGGCAGAGCTGACGTGCCTCAATGAGGCCTCTGTGC...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGAAAATGTGTAGCTGTTaGAGCTCTCCAAAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVKMCSC*SSPKAG
Trigger: ACCTGCTTTTGGAGAGCTTCAACAGCTACACATTTT...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATGTTTCGCTCCTTCTTaGAGACAATGTTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKCFAPS*RQCFQA
Trigger: AGCTTGGAAACATTGTCTTCAAGAAGGAGCGAAACA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAGAAAGTTTACTGTTCTaGTCATCCATAACCAAGATG +
Preference number: 4 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVESLLF*SSITKM
Trigger: CATCTTGGTTATGGATGATCAGAACAGTAAACTTTC...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACTTCTTCTTAGAGTCTaGGAGCTGAATGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKLLLRV*ELNVQC
Trigger: ACACTGAACATTCAGCTCTCAGACTCTAAGAAGAAG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTGGAAGTCCTTCATCTaGGCCTGCAGTTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFWKSFI*ACSFRS
Trigger: GCTTCGAAAACTGCAGGCTCAGATGAAGGACTTCCA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTGGAAGTCCTTCATCTaGGCCTGCAGTTTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGWKSFI*ACSFRS
Trigger: GCTTCGAAAACTGCAGGCTCAGATGAAGGACTTCCA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACTTCTCATTCTCTTTTaGGGTGGCAAAGATCTCATC +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKLLILF*GGKDLI
Trigger: GATGAGATCTTTGCCACCTCAAAAGAGAATGAGAAG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAAGAAGATTTTGCTCTaGCCAATCCTGTACAGGTTA +
Preference number: 4 (lower is better)
Translates to: WQAGKGREFSNGISSQTGKKILL*PILYRL
Trigger: TAACCTGTACAGGATTGGGCAGAGCAAAATCTTCTT...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATTCGGAAGAAGATTTTaGTCTGCCCAATCCTGTACA +
Preference number: 4 (lower is better)
Translates to: LALVPLKSESRASISSSEFGRRF*SAQSCT
Trigger: TGTACAGGATTGGGCAGAGCAAAATCTTCTTCCGAA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAGAGATCATAGACTCATaGTTGCTCTTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKEIIDS*LLFSFV
Trigger: CACAAAGCTGAAGAGCAAGCATGAGTCTATGATCTC...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTGCAAGTCAGCGATCTaGTCATGGAAGTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGCKSAI*SWKSLA
Trigger: TGCCAGTGACTTCCATGAGCAGATCGCTGACTTGCA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTTGGCCCTTTTGAACTaGTCCAGCTGCTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFLALLN*SSCSVS
Trigger: ACTCACAGAGCAGCTGGAGCAGTTCAAAAGGGCCAA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTTGGCCCTTTTGAACTaGTCCAGCTGCTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGLALLN*SSCSVS
Trigger: ACTCACAGAGCAGCTGGAGCAGTTCAAAAGGGCCAA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTCATCCAGCTGGTCCTaGAGGCTGTTCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFSSSWS*RLFLSS
Trigger: AGATGAAAGGAACAGCCTGCAGGACCAGCTGGATGA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCAGATTGGATACCAGTTaGCGCTGGTTGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFRLDTS*RWLSKS
Trigger: GGACTTGGACAACCAGCGGCAACTGGTATCCAATCT...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATGGCCCTTGAGGGCCTaGATGTTGACCTCTAGCCGC +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSWPLRA*MLTSSR
Trigger: GCGGCTAGAGGTCAACATGCAGGCCCTCAAGGGCCA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAGCGAGCTCTCTCAGCTaGTGCCAGGTCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSASSLS*CQVLLE
Trigger: CTCCAAGAGGACCTGGCAGCAGCTGAGAGAGCTCGC...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTTTCCTTTCTCTGCCTaGTCCTTGTACTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFFPFSA*SLYCSA
Trigger: GGCAGAGCAGTACAAGGAGCAGGCAGAGAAAGGAAA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCCTTGTGCAGCTGGGATaGGCACAAAGCCATTGGATA +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGLVQLG*AQSHWI
Trigger: TATCCAATGGCTTTGTGCCCATCCCAGCTGCACAAG...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGTGTCACCTGGAGCAATaGCTTTACTTTGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVCHLEQ*LYFGEE
Trigger: CTCTTCACCAAAGTAAAGCCATTGCTCCAGGTGACA...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTCCTGCCGTGTCACCTaGAGCAATGGCTTTACTTTG +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFSCRVT*SNGFTL
Trigger: CAAAGTAAAGCCATTGCTCCAGGTGACACGGCAGGA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCACCAGTTCCTGCTTCTTaGCTGCCAACCGGACCCGCA +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSPVPAS*LPTGPA
Trigger: TGCGGGTCCGGTTGGCAGCCAAGAAGCAGGAACTGG...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTCTCCAAGGCACGCTTaGACTTCTCCAGTTCATGCA +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFSPRHA*TSPVHA
Trigger: TGCATGAACTGGAGAAGTCCAAGCGTGCCTTGGAGA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCACCTCTAGCCGCAGCTTaGCATCCTCAGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSPLAAA*HPQWPA
Trigger: TGCAGGCCACTGAGGATGCCAAGCTGCGGCTAGAGG...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAACATCTTTGCCAACTGTaGCCTTCTTTCCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKHLCQL*PSFHFP
Trigger: TGGAAAATGGAAAGAAGGTCACAGTTGGCAAAGATG...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGAAAATGTGTAGCTGTTaGAGCTCTCCAAAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVKMCSC*SSPKAG
Trigger: ACCTGCTTTTGGAGAGCTTCAACAGCTACACATTTT...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGAAAGTTTACTGTTCTaGTCATCCATAACCAAGATG +
Preference number: 4 (lower is better)
Translates to: SEPSVFSITLRPPALLEGESLLF*SSITKM
Trigger: CATCTTGGTTATGGATGATCAGAACAGTAAACTTTC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCCTCCTTGATGCTGGCTaGTTCGAAGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCLLDAG*FEALLL
Trigger: GAGAAGCAGGGCTTCGAAGCAGCCAGCATCAAGGAG...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR GCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAGCCCTTGTGGGAGGATaGCACCACAGCCAAGTACTG +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSALVGG*HHSQVL
Trigger: CAGTACTTGGCTGTGGTGGCATCCTCCCACAAGGGC...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGAAGAAGATTTTGCTCTaGCCAATCCTGTACAGGTTA +
Preference number: 4 (lower is better)
Translates to: VPLKSESRASISSSEPSVKKILL*PILYRL
Trigger: TAACCTGTACAGGATTGGGCAGAGCAAAATCTTCTT...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTACTTGCAAAGTCCTaGAGCTTCTTCTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKVLAKS*SFFLES
Trigger: AGACTCTAAGAAGAAGCTGCAGGACTTTGCAAGTAC...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAGCATCCTCAGTGGCCTaGAGCTCATCCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSASSVA*SSSSNS
Trigger: GGAGTTGGAGGATGAGCTGCAGGCCACTGAGGATGC...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCCTGTGGCCAGCTCATTaGTCAGTTGCTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCLWPAH*SVAQPA
Trigger: TGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAG...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR GCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCACGCTCATCCTCCACCTaGAGCAGGACCTCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSRSSST*SRTSFS
Trigger: GCTAAAGGAGGTCCTGCTGCAGGTGGAGGATGAGCG...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATGGGCACAAAGCCATTaGATAAAAATGTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKWAQSH*IKMCSC
Trigger: ACAGCTACACATTTTTATCCAATGGCTTTGTGCCCA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATCCTCAGCTAACAACTaGTCAAATTTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSSANN*SNFFCF
Trigger: GAAGCAGAAGAAATTTGACCAGTTGTTAGCTGAGGA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAGGTACTTGTAGGGGTTaGCCACCACACAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSGTCRG*PPHRRG
Trigger: GCCTCTTCTGTGTGGTGGTCAACCCCTACAAGTACC...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCATGAGAATGCAGGCTTaGTTTCCATCCATGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFMRMQA*FPSMKP
Trigger: AGGCTTCATGGATGGAAAGCAAGCCTGCATTCTCAT...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTCTTTCTTTGCCAGCTaGATCTTGAGCTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFSFFAS*ILSSAI
Trigger: GATTGCAGAGCTCAAGATGCAGCTGGCAAAGAAAGA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTCCTTCTCCAGTGTCTaGTTGCTTTTGTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFSFSSV*LLLSRF
Trigger: AAACCTGGACAAAAGCAAGCAGACACTGGAGAAGGA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR GCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAGCCTGCTCCTTGTACTaGTCTGCCATCTTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSACSLY*SAILRS
Trigger: TGAGCGCAAGATGGCAGAGCAGTACAAGGAGCAGGC...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCGATATGTTTCAATATTaGCACCTACAATGTAACCAG +
Preference number: 4 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSDMFQY*HLQCNQ
Trigger: CTGGTTACATTGTAGGTGCCAATATTGAAACATATC...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCGCTCATGGAAGTCACTaGCATCACCCTCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCAHGSH*HHPPVS
Trigger: GGAAACTGGAGGGTGATGCCAGTGACTTCCATGAGC...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR CCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATGCCGGGTTTCTTCTTaGAGCAGCTCTTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSCRVSS*SSSWVS
Trigger: GGACACCCAAGAGCTGCTCCAAGAAGAAACCCGGCA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCCAGCCAAGTACTGTATaGCTTTCTTTGTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFQPSTV*LSLCSL
Trigger: CAGAGAACACAAAGAAAGTCATACAGTACTTGGCTG...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR TCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCCTTCTTCTTAGAGTCTaGGAGCTGAATGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGLLLRV*ELNVQC
Trigger: ACACTGAACATTCAGCTCTCAGACTCTAAGAAGAAG...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATGCTGCTGTCTTTCTTaGCCTTGTGGGAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSCCCLS*PCGRMP
Trigger: TGGCATCCTCCCACAAGGGCAAGAAAGACAGCAGCA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTTCGGAAGAAGATTTTaGTCTGCCCAATCCTGTACA +
Preference number: 4 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGFGRRF*SAQSCT
Trigger: TGTACAGGATTGGGCAGAGCAAAATCTTCTTCCGAA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATCTTCCTCCTCCAGTTaGTCCTCCAGGTCTAGCATC +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSSSSSS*SSRSSI
Trigger: GATGCTAGACCTGGAGGAGCAACTGGAGGAGGAAGA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCGACACATTGAGCTTCTaGCGGGTTTCTTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCDTLSF*RVSSWS
Trigger: GCTCCAAGAAGAAACCCGGCAGAAGCTCAATGTGTC...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR GCA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCTCATCCAGCTGGTCCTaGAGGCTGTTCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCSSSWS*RLFLSS
Trigger: AGATGAAAGGAACAGCCTGCAGGACCAGCTGGATGA...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR GCA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCGGTGTTTCCTTTCTCTaGCTGCTCCTTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCGVSFL*LLLVLL
Trigger: GAGCAGTACAAGGAGCAGGCAGAGAAAGGAAACACC...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR GCA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCAGCTGCCTCTTCAGCTaGTTGACCTTGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCSCLFS*LTLVFP
Trigger: AGGAAACACCAAGGTCAAGCAGCTGAAGAGGCAGCT...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR CCA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAGATATGTTTCAATATTaGCACCTACAATGTAACCAG +
Preference number: 4 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKDMFQY*HLQCNQ
Trigger: CTGGTTACATTGTAGGTGCCAATATTGAAACATATC...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAGGAACATGCCCTTTTTaGTCTTGGAGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSGTCPF*SWRHWA
Trigger: TGCCCAGTGCCTCCAAGACCAAAAAGGGCATGTTCC...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATCAGCGATCTGCTCATaGAAGTCACTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSSAICS*KSLASP
Trigger: GGGTGATGCCAGTGACTTCCATGAGCAGATCGCTGA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCGTACTCTATCACTCATaGCCTCCATGTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCVLYHS*PPCCPA
Trigger: AGCAGGGCAACATGGAGGCCATGAGTGATAGAGTAC...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR CCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCACCCGTAGGCAAAAGATaGACCTTGCGTGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSPVGKR*TLRDAA
Trigger: AGCAGCATCACGCAAGGTCCATCTTTTGCCTACGGG...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000231567.2
3UTR CAA 72 bp TTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTaGAATTCACACCCTTTGTGCAGGGCTGTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: LFGFFSDSPSKN*NSHPLCRAVVD
Trigger: GTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAGTTATCAGGCATGGATaGCTGGTCTGTGTTTCGCTC +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSVIRHG*LVCVSL
Trigger: GAGCGAAACACAGACCAGGCATCCATGCCTGATAAC...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATTTCCTTTCTCTGCCTaGTCCTTGTACTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSFPFSA*SLYCSA
Trigger: GGCAGAGCAGTACAAGGAGCAGGCAGAGAAAGGAAA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATCCTGCCGTGTCACCTaGAGCAATGGCTTTACTTTG +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSSCRVT*SNGFTL
Trigger: CAAAGTAAAGCCATTGCTCCAGGTGACACGGCAGGA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATGTAGGTCTGAGATATaGCCCTCTAGCTCGCGAATC +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSCRSEI*PSSSRI
Trigger: GATTCGCGAGCTAGAGGGCCATATCTCAGACCTACA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR GCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAATGAGAATGCAGGCTTaGTTTCCATCCATGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSMRMQA*FPSMKP
Trigger: AGGCTTCATGGATGGAAAGCAAGCCTGCATTCTCAT...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCACAGCCAAGTACTGTATaGCTTTCTTTGTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSQPSTV*LSLCSL
Trigger: CAGAGAACACAAAGAAAGTCATACAGTACTTGGCTG...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR TCA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAAAAATGTGTAGCTGTTaGAGCTCTCCAAAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSKMCSC*SSPKAG
Trigger: ACCTGCTTTTGGAGAGCTTCAACAGCTACACATTTT...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CCA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCGATATGTTTCAATATTaGCACCTACAATGTAACCAG +
Preference number: 4 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCDMFQY*HLQCNQ
Trigger: CTGGTTACATTGTAGGTGCCAATATTGAAACATATC...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS GCA 90 bp CGGCCCATGGCCTCATTGCTCTCTGTGGCCTCATCTAGCTCCCGCTaGAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RPMASLLSVASSSSR*SFLRLALMRWDSSS
Trigger: AGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCGGGAGCTAGATGAGGCCACAGAGAGCAATGAGGCCATGGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTCCTCCAGCTCCGTCTaGAGTGCCTCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGSSSSV*SASSSS
Trigger: GGAGGAGCTGGAGGCACTCAAGACGGAGCTGGAGGA...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS GCA 90 bp GGCGCTCCAGCTGTTGCCGTGCGCTCTCATTCTTCTGAGCCGTGCTaGGTTCTGTGGCCAGCTCATTGCTCAGTTGCTCAGCCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: GAPAVAVRSHSSEPC*VLWPAHCSVAQPAV
Trigger: CACTGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGAATGAGAGCGCACGGCAACAGCTGGAGCGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCCTGGCGCTCCAGCTGTaGCCGTGCGCTCTCATTCTT +
Preference number: 5 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGLALQL*PCALIL
Trigger: AAGAATGAGAGCGCACGGCAACAGCTGGAGCGCCAG...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTGCAGCTTCCTGCGGTaGGCGTTGATGCGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGCSFLR*ALMRWD
Trigger: GTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCCGGCCCATGGCCTCATaGCTCTCTGTGGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGRPMAS*LSVASS
Trigger: AGATGAGGCCACAGAGAGCAATGAGGCCATGGGCCG...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS GCA 90 bp TCAGCCCGGGCACGCTCCCCATCACTGCACTTGGACTGCAGATCCTaGAGCTGCACCTCCAGCTTCTTCTTCTTGTGTTCCACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SARARSPSLHLDCRS*SCTSSFFFLCSTSC
Trigger: GCAGGAGGTGGAACACAAGAAGAAGAAGCTGGAGGTGCAGCTGCAGGATCTGCAGTCCAAGTGCAGTGATGGGGAGCGTGCCCGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 90 bp TCTGGCGCTCCAGCTGTTGCCGTGCGCTCTCATTCTTCTGAGCCGTaGTGCGTTCTGTGGCCAGCTCATTGCTCAGTTGCTCAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: SGAPAVAVRSHSSEP*CVLWPAHCSVAQPA
Trigger: TGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGAATGAGAGCGCACGGCAACAGCTGGAGCGCCAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 90 bp GCTGTTGCCGTGCGCTCTCATTCTTCTGAGCCGTGCTGCGTTCTGTaGCCAGCTCATTGCTCAGTTGCTCAGCCTGCAGTGTGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: AVAVRSHSSEPCCVL*PAHCSVAQPAVWPC
Trigger: GCAAGGCCACACTGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGAATGAGAGCGCACGGCAACAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTCGCCCTTCTCCTCCTaGATGCTGGCTGCTTCGAAG +
Preference number: 5 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGSPFSS*MLAASK
Trigger: CTTCGAAGCAGCCAGCATCAAGGAGGAGAAGGGCGA...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTAGCACAGAGGCCTCATaGAGGCACGTCAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCSTEAS*RHVSSA
Trigger: GGCAGAGCTGACGTGCCTCAATGAGGCCTCTGTGCT...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCAGCGGGTCCATGTTCTaGGTCAGCCAGGCACTTGCA +
Preference number: 5 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGSGSMF*VSQALA
Trigger: TGCAAGTGCCTGGCTGACCAAGAACATGGACCCGCT...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTACCTCCTGTTCCCTCTaGGCTCTGAGCTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCTSCSL*ALSSCW
Trigger: CCAGCAGGAGCTCAGAGCCAAGAGGGAACAGGAGGT...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGACCTCCTGTTCCCTCTaGGCTCTGAGCTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVTSCSL*ALSSCW
Trigger: CCAGCAGGAGCTCAGAGCCAAGAGGGAACAGGAGGT...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGCTGGCGCTCCAGCTGTaGCCGTGCGCTCTCATTCTT +
Preference number: 5 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVLALQL*PCALIL
Trigger: AAGAATGAGAGCGCACGGCAACAGCTGGAGCGCCAG...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTGCAGCTTCCTGCGGTaGGCGTTGATGCGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFCSFLR*ALMRWD
Trigger: GTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCGCGTTGCCGGAACTCTaGGAAGACAATCCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGALPEL*EDNPVG
Trigger: CCCAACAGGATTGTCTTCCAAGAGTTCCGGCAACGC...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGAAGAGCCGCCACCATaGCCAGTTGCGGAGCTTAAG +
Preference number: 5 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCEEPPP*PVAELK
Trigger: CTTAAGCTCCGCAACTGGCAATGGTGGCGGCTCTTC...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCACCAGTTGCCGCTGGTaGTCCAAGTCCACGACCAGG +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFTSCRW*SKSTTR
Trigger: CCTGGTCGTGGACTTGGACAACCAGCGGCAACTGGT...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTGCTGCCAGGTCCTCTaGGAGCTGCATGAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFCCQVL*ELHEVC
Trigger: GCAGACCTCATGCAGCTCCAAGAGGACCTGGCAGCA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTCCAGGTCAGCTTGCTaGCGAGCTCTCTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCSRSAC*RALSAA
Trigger: AGCAGCTGAGAGAGCTCGCAAGCAAGCTGACCTGGA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCTCATGGCCTCCATGTaGCCCTGCTCTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFLMASM*PCSSSS
Trigger: GCTGGAGGAAGAGCAGGGCAACATGGAGGCCATGAG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGCAGCTCATTGCTCAGTaGCTCAGCCTGCAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVQLIAQ*LSLQCG
Trigger: GCCACACTGCAGGCTGAGCAACTGAGCAATGAGCTG...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCTGCGGTTGGCGTaGATGCGCTGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDFLRLA*MRWDSS
Trigger: GGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTCGCCCTTCTCCTCCTaGATGCTGGCTGCTTCGAAG +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFSPFSS*MLAASK
Trigger: CTTCGAAGCAGCCAGCATCAAGGAGGAGAAGGGCGA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTCCCTGCCGATGGGTCTaGTCCAAGGCCTTGTTTACA +
Preference number: 5 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCPCRWV*SKALFT
Trigger: TGTAAACAAGGCCTTGGACAAGACCCATCGGCAGGG...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGAGCTCTCAGTCATCTaGGCCATCTGGTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDELSVI*AIWSSP
Trigger: GGGGCTGGACCAGATGGCCAAGATGACTGAGAGCTC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGCCGCTCCTTGATCTTTaGCATCTCCTCCTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGPLLDL*HLLLLG
Trigger: GCCAAGGAGGAGGAGATGCAAAAGATCAAGGAGCGG...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTCCAGTTTCTTGATCTaGGCCTCAGCCGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGSSFLI*ASAVTF
Trigger: GAAGGTCACGGCTGAGGCCAAGATCAAGAAACTGGA...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTTTGCCAGCTGCATCTaGAGCTCTGCAATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCFASCI*SSAIWA
Trigger: GGCCCAGATTGCAGAGCTCAAGATGCAGCTGGCAAA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTGCTTCTCGGCCTaGTTCCTGGCAGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDFCFSA*FLAARS
Trigger: AGAGCGGGCTGCCAGGAACAAGGCCGAGAAGCAGAA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTCCCCATCACTGCACTaGGACTGCAGATCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFSPSLH*DCRSCS
Trigger: GCTGCAGGATCTGCAGTCCAAGTGCAGTGATGGGGA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTTGCCCTCTGCCTCATaGAGCATGCCAGTGACACTC +
Preference number: 5 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGLPSAS*SMPVTL
Trigger: GAGTGTCACTGGCATGCTCAATGAGGCAGAGGGCAA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCCAGATTGGATACCAGTaGCCGCTGGTTGTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGQIGYQ*PLVVQV
Trigger: GACTTGGACAACCAGCGGCAACTGGTATCCAATCTG...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS GCA 90 bp CGCTCTCATTCTTCTGAGCCGTGCTGCGTTCTGTGGCCAGCTCATTaGTCAGTTGCTCAGCCTGCAGTGTGGCCTTGCGTACTCTATCAC +
Preference number: 5 (lower is better)
Translates to: RSHSSEPCCVLWPAH*SVAQPAVWPCVLYH
Trigger: GTGATAGAGTACGCAAGGCCACACTGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGAATGAGAGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCGTCTTGTCCAAGGCCTaGTTTACACGGCTGAGAATC +
Preference number: 5 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGVLSKA*FTRLRI
Trigger: GATTCTCAGCCGTGTAAACAAGGCCTTGGACAAGAC...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGAGCTCTCAGTCATCTaGGCCATCTGGTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVELSVI*AIWSSP
Trigger: GGGGCTGGACCAGATGGCCAAGATGACTGAGAGCTC...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGAAGAGCCGCCACCATaGCCAGTTGCGGAGCTTAAG +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDEEPPP*PVAELK
Trigger: CTTAAGCTCCGCAACTGGCAATGGTGGCGGCTCTTC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCCGCTCCTTGATCTTTaGCATCTCCTCCTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFPLLDL*HLLLLG
Trigger: GCCAAGGAGGAGGAGATGCAAAAGATCAAGGAGCGG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTCATCCTCCAGTTTCTaGATCTTGGCCTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGSSSSF*ILASAV
Trigger: CACGGCTGAGGCCAAGATCAAGAAACTGGAGGATGA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTTTGCCAGCTGCATCTaGAGCTCTGCAATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFFASCI*SSAIWA
Trigger: GGCCCAGATTGCAGAGCTCAAGATGCAGCTGGCAAA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTTTGCCTTGGCCCTTTaGAACTGCTCCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCFALAL*NCSSCS
Trigger: AGAGCAGCTGGAGCAGTTCAAAAGGGCCAAGGCAAA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGACATCTTTGGCCAGTTaGATGGCTTTGCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGTSLAS*MALPSA
Trigger: GGCAGAGGGCAAAGCCATCAAACTGGCCAAAGATGT...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGACATCTTTGGCCAGTTaGATGGCTTTGCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVTSLAS*MALPSA
Trigger: GGCAGAGGGCAAAGCCATCAAACTGGCCAAAGATGT...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCAGCTTGGTAGACACATaGAGCTTCTGCCGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SQTGRSGRSGKGWEWVGGSLVDT*SFCRVS
Trigger: AGAAACCCGGCAGAAGCTCAATGTGTCTACCAAGCT...GCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGCTGAATGTTCAGTGTaGAGACATGGCGCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCAECSV*RHGAPG
Trigger: ACCTGGAGCGCCATGTCTCAACACTGAACATTCAGC...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTACTAGTTGGGCGATCCTaGCCTCCAGGCGGCGCTTCT +
Preference number: 5 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVLVGRS*PPGGAS
Trigger: AGAAGCGCCGCCTGGAGGCAAGGATCGCCCAACTAG...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCGCCGCAACAGTGGACTaGAGCTTGGCTTTGACAGCA +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFAATVD*SLALTA
Trigger: TGCTGTCAAAGCCAAGCTCAAGTCCACTGTTGCGGC...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGTTCTCTGCCTGCTCCTaGTACTGCTCTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGFSACS*YCSAIL
Trigger: CAAGATGGCAGAGCAGTACAAGGAGCAGGCAGAGAA...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATCTCCTGAGTTTGCTCTaGAGGGCGTTCACCTCACGG +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDLLSLL*RAFTSR
Trigger: CCGTGAGGTGAACGCCCTCAAGAGCAAACTCAGGAG...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS CCA 90 bp TCATTGAGCATGCCAGTGACACTCTCCACTTCATTCTGTAGCTTGTaGACCTTGTCACTGAGCTCAGCCCGGGCACGCTCCCCATCACTG +
Preference number: 5 (lower is better)
Translates to: SLSMPVTLSTSFCSL*TLSLSSARARSPSL
Trigger: CAGTGATGGGGAGCGTGCCCGGGCTGAGCTCAGTGACAAGGTCCACAAGCTACAGAATGAAGTGGAGAGTGTCACTGGCATGCTCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATCTGTCTTTCTTGCCCTaGTGGGAGGATGCCACCACA +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDLSFLP*WEDATT
Trigger: TGTGGTGGCATCCTCCCACAAGGGCAAGAAAGACAG...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTCGGAACATGCCCTTTTaGGTCTTGGAGGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVRNMPF*VLEALG
Trigger: GCCCAGTGCCTCCAAGACCAAAAAGGGCATGTTCCG...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTCATGGCTGTCAGCTGTaGCTGCCTCTTGGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVHGCQL*LPLGEG
Trigger: GCCTTCACCAAGAGGCAGCAACAGCTGACAGCCATG...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGAGCAATGGCTTTACTTaGGTGAAGAGCCGCCACCAT +
Preference number: 5 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGSNGFT*VKSRHH
Trigger: ATGGTGGCGGCTCTTCACCAAAGTAAAGCCATTGCT...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATCCCTCCAGTTTCCTCTaGAGTTTCTCCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDPSSFL*SFSSSC
Trigger: GCAGGAGCTGGAGAAACTCAAGAGGAAACTGGAGGG...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTCCTCCAGCTCCGTCTaGAGTGCCTCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSSSSSV*SASSSS
Trigger: GGAGGAGCTGGAGGCACTCAAGACGGAGCTGGAGGA...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTGCCCTCTGCCTCATaGAGCATGCCAGTGACACTC +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDLPSAS*SMPVTL
Trigger: GAGTGTCACTGGCATGCTCAATGAGGCAGAGGGCAA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTCTGCCGGGTTTCTTCTaGGAGCAGCTCTTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVLPGFF*EQLLGV
Trigger: GACACCCAAGAGCTGCTCCAAGAAGAAACCCGGCAG...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCGCTGAATGTTCAGTGTaGAGACATGGCGCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFAECSV*RHGAPG
Trigger: ACCTGGAGCGCCATGTCTCAACACTGAACATTCAGC...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCAGATTGGATACCAGTaGCCGCTGGTTGTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFQIGYQ*PLVVQV
Trigger: GACTTGGACAACCAGCGGCAACTGGTATCCAATCTG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACTAGTTGGGCGATCCTaGCCTCCAGGCGGCGCTTCT +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGLVGRS*PPGGAS
Trigger: AGAAGCGCCGCCTGGAGGCAAGGATCGCCCAACTAG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGACTAGTTGGGCGATCCTaGCCTCCAGGCGGCGCTTCT +
Preference number: 5 (lower is better)
Translates to: WQAGKGREFSNGISSQTGLVGRS*PPGGAS
Trigger: AGAAGCGCCGCCTGGAGGCAAGGATCGCCCAACTAG...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGACAGTGGACTTGAGCTaGGCTTTGACAGCACCTTCT +
Preference number: 5 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGTVDLS*ALTAPS
Trigger: AGAAGGTGCTGTCAAAGCCAAGCTCAAGTCCACTGT...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTTTCAGCTGCTTGACCTaGGTGTTTCCTTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCFSCLT*VFPFSA
Trigger: GGCAGAGAAAGGAAACACCAAGGTCAAGCAGCTGAA...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS GCA 90 bp GTCCGCGTTCTCCTTCTCCAGTGTCTGCTTGCTTTTGTCCAGGTTTaGCTTGGCCCTTTTGAACTGCTCCAGCTGCTCTGTGAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: VRVLLLQCLLAFVQV*LGPFELLQLLCEFL
Trigger: GAGGAACTCACAGAGCAGCTGGAGCAGTTCAAAAGGGCCAAGGCAAACCTGGACAAAAGCAAGCAGACACTGGAGAAGGAGAACGCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTTGACGGTTTTCGCATaGCCGAAAGCCTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFLTVFA*PKASRI
Trigger: AATCCTGGAGGCTTTCGGCAATGCGAAAACCGTCAA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGCCAGTGACATCGAAGTaGATGCGAATGAACTTGCCA +
Preference number: 5 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVPVTSK*MRMNLP
Trigger: TGGCAAGTTCATTCGCATCAACTTCGATGTCACTGG...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTCCAGTGACATCGAAGTaGATGCGAATGAACTTGCCA +
Preference number: 5 (lower is better)
Translates to: QTGRSGRSGKGWEWVGGCPVTSK*MRMNLP
Trigger: TGGCAAGTTCATTCGCATCAACTTCGATGTCACTGG...ACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCGTCTTGTCCAAGGCCTaGTTTACACGGCTGAGAATC +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFVLSKA*FTRLRI
Trigger: GATTCTCAGCCGTGTAAACAAGGCCTTGGACAAGAC...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGAGGAGTGATGTCACATaGTCATTTAGCGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGRSDVT*SFSGSM
Trigger: CATGGACCCGCTAAATGACAATGTGACATCACTCCT...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATAGGTCAGCCACAAACTaGTCAGAGGAGGCATTGAGG +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDRSATN*SEEALR
Trigger: CCTCAATGCCTCCTCTGACAAGTTTGTGGCTGACCT...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGAAGTTAGGCGTGGTATaGCGCAGTGTAGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGKLGVV*RSVVIS
Trigger: ACTGATGACTACACTGCGCAATACCACGCCTAACTT...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTGCTGCCGCTCCTaGATCTTTTGCATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDFCCRS*IFCISS
Trigger: GGAGGAGATGCAAAAGATCAAGGAGCGGCAGCAGAA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTCATCCTCCAGTTTCTaGATCTTGGCCTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDSSSSF*ILASAV
Trigger: CACGGCTGAGGCCAAGATCAAGAAACTGGAGGATGA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATCCTCCAGCTCCGTCTaGAGTGCCTCCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSSSSV*SASSSS
Trigger: GGAGGAGCTGGAGGCACTCAAGACGGAGCTGGAGGA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCAGCTTGGTAGACACATaGAGCTTCTGCCGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFSLVDT*SFCRVS
Trigger: AGAAACCCGGCAGAAGCTCAATGTGTCTACCAAGCT...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGACCAGTTGCCGCTGGTaGTCCAAGTCCACGACCAGG +
Preference number: 5 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKTSCRW*SKSTTR
Trigger: CCTGGTCGTGGACTTGGACAACCAGCGGCAACTGGT...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCCTCTCATCCGCATACTaGGAGGAGATGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFLSSAY*EEMFFS
Trigger: GGAGAAGAACATCTCCTCCAAGTATGCGGATGAGAG...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAACCTCTAGCCGCAGCTaGGCATCCTCAGTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKTSSRS*ASSVAC
Trigger: GCAGGCCACTGAGGATGCCAAGCTGCGGCTAGAGGT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGCTCATGGCCTCCATGTaGCCCTGCTCTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKLMASM*PCSSSS
Trigger: GCTGGAGGAAGAGCAGGGCAACATGGAGGCCATGAG...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTCTGCCTGCTCCTaGTACTGCTCTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDFSACS*YCSAIL
Trigger: CAAGATGGCAGAGCAGTACAAGGAGCAGGCAGAGAA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTTCAGCTGCTTGACCTaGGTGTTTCCTTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFFSCLT*VFPFSA
Trigger: GGCAGAGAAAGGAAACACCAAGGTCAAGCAGCTGAA...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATTCCTGCGGTTGGCGTaGATGCGCTGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKFLRLA*MRWDSS
Trigger: GGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACGGCCCATGGCCTCATaGCTCTCTGTGGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGRPMAS*LSVASS
Trigger: AGATGAGGCCACAGAGAGCAATGAGGCCATGGGCCG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATCGCCCTTCTCCTCCTaGATGCTGGCTGCTTCGAAG +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGSPFSS*MLAASK
Trigger: CTTCGAAGCAGCCAGCATCAAGGAGGAGAAGGGCGA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp AAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGGGCTGTGGTGTTTCGCTCCTTCTaGAAGACAATGTTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: KLEGQAGQGKVGSGLGAVVFRSF*KTMFPS
Trigger: GCTTGGAAACATTGTCTTCAAGAAGGAGCGAAACAC...CACAGCCCCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTATGGTCAGCCAGGCACTaGCATTGTAGTCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVWSARH*HCSPPS
Trigger: GGAAGGTGGACTACAATGCAAGTGCCTGGCTGACCA...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGACATGGCTGTCAGCTGTaGCTGCCTCTTGGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: WQAGKGREFSNGISSQTGHGCQL*LPLGEG
Trigger: GCCTTCACCAAGAGGCAGCAACAGCTGACAGCCATG...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACATGGCTGTCAGCTGTaGCTGCCTCTTGGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGHGCQL*LPLGEG
Trigger: GCCTTCACCAAGAGGCAGCAACAGCTGACAGCCATG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGGGATCATAGACTCATGCTaGCTCTTCAGCTTTGTGAGG +
Preference number: 5 (lower is better)
Translates to: SSQTGRSGRSGKGWEWVGIIDSC*LFSFVR
Trigger: CCTCACAAAGCTGAAGAGCAAGCATGAGTCTATGAT...CCCAACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATTCTGCTTCTCGGCCTaGTTCCTGGCAGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSEFCFSA*FLAARS
Trigger: AGAGCGGGCTGCCAGGAACAAGGCCGAGAAGCAGAA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAACCTCCTGTTCCCTCTaGGCTCTGAGCTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSETSCSL*ALSSCW
Trigger: CCAGCAGGAGCTCAGAGCCAAGAGGGAACAGGAGGT...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCTCCAGTGTCTGCTaGCTTTTGTCCAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDFSSVC*LLSRFA
Trigger: GGCAAACCTGGACAAAAGCAAGCAGACACTGGAGAA...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATAGGGAAGCCACATCTTaGGCCAGTTTGATGGCTTTG +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDREATS*ASLMAL
Trigger: CAAAGCCATCAAACTGGCCAAAGATGTGGCTTCCCT...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACTGCCGGGTTTCTTCTaGGAGCAGCTCTTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGLPGFF*EQLLGV
Trigger: GACACCCAAGAGCTGCTCCAAGAAGAAACCCGGCAG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAACCAGTTGCCGCTGGTaGTCCAAGTCCACGACCAGG +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSETSCRW*SKSTTR
Trigger: CCTGGTCGTGGACTTGGACAACCAGCGGCAACTGGT...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGACCTCTAGCCGCAGCTaGGCATCCTCAGTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVTSSRS*ASSVAC
Trigger: GCAGGCCACTGAGGATGCCAAGCTGCGGCTAGAGGT...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTAGTTTTCGAAGCTGCTaGATGGCTTCCTCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVSFRSC*MASSLP
Trigger: AGGGAGGGAGGAAGCCATCAAGCAGCTTCGAAAACT...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTGCTGCCAGGTCCTCTaGGAGCTGCATGAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVCCQVL*ELHEVC
Trigger: GCAGACCTCATGCAGCTCCAAGAGGACCTGGCAGCA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGCTCATGGCCTCCATGTaGCCCTGCTCTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVLMASM*PCSSSS
Trigger: GCTGGAGGAAGAGCAGGGCAACATGGAGGCCATGAG...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGACAGCTCATTGCTCAGTaGCTCAGCCTGCAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: WQAGKGREFSNGISSQTGQLIAQ*LSLQCG
Trigger: GCCACACTGCAGGCTGAGCAACTGAGCAATGAGCTG...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGCTGGCGCTCCAGCTGTaGCCGTGCGCTCTCATTCTT +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVLALQL*PCALIL
Trigger: AAGAATGAGAGCGCACGGCAACAGCTGGAGCGCCAG...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTGACTTGAGCTTGGCTTaGACAGCACCTTCTACCTCC +
Preference number: 5 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVDLSLA*TAPSTS
Trigger: GGAGGTAGAAGGTGCTGTCAAAGCCAAGCTCAAGTC...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATTTCACCTCCTTTAGCTTCTaGTCCTTTTGCTTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: HTLCAGLWLTPGEGWSDFTSFSF*SFCFSD
Trigger: GTCGCTGAAGCAAAAGGACAAGAAGCTAAAGGAGGT...GAAATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS CCA 90 bp TGCTTTTCCAGCTCCCCCGTGATGCTGCTGTCTTTCTTGCCCTTGTaGGAGGATGCCACCACAGCCAAGTACTGTATGACTTTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: CFSSSPVMLLSFLPL*EDATTAKYCMTFFV
Trigger: CACAAAGAAAGTCATACAGTACTTGGCTGTGGTGGCATCCTCCCACAAGGGCAAGAAAGACAGCAGCATCACGGGGGAGCTGGAAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
CDS CCA 90 bp CTGGCAGCCCGCTCTGAGTCTAGGTCCTCTTGTAGGTCTGAGATATaGCCCTCTAGCTCGCGAATCTTCTTTAGGGCATTGTTTTTCTGG +
Preference number: 5 (lower is better)
Translates to: LAARSESRSSCRSEI*PSSSRIFFRALFFW
Trigger: CCAGAAAAACAATGCCCTAAAGAAGATTCGCGAGCTAGAGGGCCATATCTCAGACCTACAAGAGGACCTAGACTCAGAGCGGGCTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACTGTCTTTCTTGCCCTaGTGGGAGGATGCCACCACA +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGLSFLP*WEDATT
Trigger: TGTGGTGGCATCCTCCCACAAGGGCAAGAAAGACAG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTCCTCCAGGATTGGGTTaGCCTGTAGAAGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVPPGLG*PVEAAF
Trigger: AAAAGCAGCTTCTACAGGCAAACCCAATCCTGGAGG...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATGGTCAGCCAGGCACTaGCATTGTAGTCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: WQAGKGREFSNGISSQTGWSARH*HCSPPS
Trigger: GGAAGGTGGACTACAATGCAAGTGCCTGGCTGACCA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAAGCGGGTCCATGTTCTaGGTCAGCCAGGCACTTGCA +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSGSMF*VSQALA
Trigger: TGCAAGTGCCTGGCTGACCAAGAACATGGACCCGCT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp ATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGGTGAGGGGTGGAGTGATGTTCGGAAGAAGATTTaGCTCTGCCCAATCCTGTAC +
Preference number: 5 (lower is better)
Translates to: IHTLCAGLWLTPGEGWSDVRKKI*LCPILY
Trigger: GTACAGGATTGGGCAGAGCAAAATCTTCTTCCGAAC...ATCACTCCACCCCTCACCAGGAGTCAACCACAGCCCTGCACAAAGGGTGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAGAAGAGCCGCCACCATaGCCAGTTGCGGAGCTTAAG +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSEEEPPP*PVAELK
Trigger: CTTAAGCTCCGCAACTGGCAATGGTGGCGGCTCTTC...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGATGGCGCTCCAGGTTTaGCTTAGCCTCCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKMALQV*LSLHLL
Trigger: GAGGAGATGGAGGCTAAGCAAAACCTGGAGCGCCAT...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACGTTCAAACTGGCCCTaGAGGGCCTGCATGTTGACC +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKRSNWP*RACMLT
Trigger: GGTCAACATGCAGGCCCTCAAGGGCCAGTTTGAACG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATCCAGGTCAGCTTGCTaGCGAGCTCTCTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSESRSAC*RALSAA
Trigger: AGCAGCTGAGAGAGCTCGCAAGCAAGCTGACCTGGA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACAGCTCATTGCTCAGTaGCTCAGCCTGCAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKQLIAQ*LSLQCG
Trigger: GCCACACTGCAGGCTGAGCAACTGAGCAATGAGCTG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTATTTTGCTTCAGCGACTaGGTGGCCGCCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVFCFSD*VAACFS
Trigger: AGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAAAA...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGCGGCCCATGGCCTCATaGCTCTCTGTGGCCTCATCT +
Preference number: 5 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVRPMAS*LSVASS
Trigger: AGATGAGGCCACAGAGAGCAATGAGGCCATGGGCCG...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTATTTCCTCTCCTGAGTTaGCTCTTGAGGGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVFPLLS*LLRAFT
Trigger: GGTGAACGCCCTCAAGAGCAAACTCAGGAGAGGAAA...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAACCTCTGAGTTTGCTCTaGAGGGCGTTCACCTCACGG +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKPLSLL*RAFTSR
Trigger: CCGTGAGGTGAACGCCCTCAAGAGCAAACTCAGAGG...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCCTGCCGATGGGTCTaGTCCAAGGCCTTGTTTACA +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSEPCRWV*SKALFT
Trigger: TGTAAACAAGGCCTTGGACAAGACCCATCGGCAGGG...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTGGTCAGCCAGGCACTaGCATTGTAGTCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVWSARH*HCSPPS
Trigger: GGAAGGTGGACTACAATGCAAGTGCCTGGCTGACCA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAAGCGGGTCCATGTTCTaGGTCAGCCAGGCACTTGCA +
Preference number: 5 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKSGSMF*VSQALA
Trigger: TGCAAGTGCCTGGCTGACCAAGAACATGGACCCGCT...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGAGGTCAGCCACAAACTaGTCAGAGGAGGCATTGAGG +
Preference number: 5 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKRSATN*SEEALR
Trigger: CCTCAATGCCTCCTCTGACAAGTTTGTGGCTGACCT...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAACGGAACATGCCCTTTTaGGTCTTGGAGGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKRNMPF*VLEALG
Trigger: GCCCAGTGCCTCCAAGACCAAAAAGGGCATGTTCCG...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGCCGCTCCTTGATCTTTaGCATCTCCTCCTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVPLLDL*HLLLLG
Trigger: GCCAAGGAGGAGGAGATGCAAAAGATCAAGGAGCGG...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATCCAGTTTCTTGATCTaGGCCTCAGCCGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGSSFLI*ASAVTF
Trigger: GAAGGTCACGGCTGAGGCCAAGATCAAGAAACTGGA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGTCCAGTTTCTTGATCTaGGCCTCAGCCGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKSSFLI*ASAVTF
Trigger: GAAGGTCACGGCTGAGGCCAAGATCAAGAAACTGGA...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGCCCTCCAGTTTCCTCTaGAGTTTCTCCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVPSSFL*SFSSSC
Trigger: GCAGGAGCTGGAGAAACTCAAGAGGAAACTGGAGGG...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATTTGCCAGCTGCATCTaGAGCTCTGCAATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSEFASCI*SSAIWA
Trigger: GGCCCAGATTGCAGAGCTCAAGATGCAGCTGGCAAA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAATCCCCATCACTGCACTaGGACTGCAGATCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKSPSLH*DCRSCS
Trigger: GCTGCAGGATCTGCAGTCCAAGTGCAGTGATGGGGA...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTTGCCCTCTGCCTCATaGAGCATGCCAGTGACACTC +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVLPSAS*SMPVTL
Trigger: GAGTGTCACTGGCATGCTCAATGAGGCAGAGGGCAA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACATCTTTGGCCAGTTaGATGGCTTTGCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGTSLAS*MALPSA
Trigger: GGCAGAGGGCAAAGCCATCAAACTGGCCAAAGATGT...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGCTGCCGGGTTTCTTCTaGGAGCAGCTCTTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVLPGFF*EQLLGV
Trigger: GACACCCAAGAGCTGCTCCAAGAAGAAACCCGGCAG...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAATGGCGCTCCAGGTTTaGCTTAGCCTCCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSEMALQV*LSLHLL
Trigger: GAGGAGATGGAGGCTAAGCAAAACCTGGAGCGCCAT...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGACAGATTGGATACCAGTaGCCGCTGGTTGTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGQIGYQ*PLVVQV
Trigger: GACTTGGACAACCAGCGGCAACTGGTATCCAATCTG...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTATGCTTCTTTTCCAGATaGGATACCAGTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVCFFSR*DTSCRW
Trigger: CCAGCGGCAACTGGTATCCAATCTGGAAAAGAAGCA...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAGCTTTGAGCATCTTGTaGGTCCTCTCCAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVALSIL*VLSSSS
Trigger: AGAAGAGCTGGAGAGGACCAACAAGATGCTCAAAGC...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATTGCCTACATCATCCTaGGAGCTGACCAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: WQAGKGREFSNGISSQTGLPTSS*ELTRSS
Trigger: GGAAGACCTGGTCAGCTCCAAGGATGATGTAGGCAA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ATTTCCTCCCAAACTGGAAGGTCAGGCAGGTCAGGGAAAGGTTGGGAGTGGGTTAGTTCATGCACGTTCTaGCCTACATCATCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: ISSQTGRSGRSGKGWEWVSSCTF*PTSSLE
Trigger: CTCCAAGGATGATGTAGGCAAGAACGTGCATGAACT...AACCCACTCCCAACCTTTCCCTGACCTGCCTGACCTTCCAGTTTGGGAGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAACGTTCAAACTGGCCCTaGAGGGCCTGCATGTTGACC +
Preference number: 5 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKRSNWP*RACMLT
Trigger: GGTCAACATGCAGGCCCTCAAGGGCCAGTTTGAACG...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAATCCAGGTCAGCTTGCTaGCGAGCTCTCTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKSRSAC*RALSAA
Trigger: AGCAGCTGAGAGAGCTCGCAAGCAAGCTGACCTGGA...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCGACTTGAGCTTGGCTTaGACAGCACCTTCTACCTCC +
Preference number: 5 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSDLSLA*TAPSTS
Trigger: GGAGGTAGAAGGTGCTGTCAAAGCCAAGCTCAAGTC...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAGCCGCAACAGTGGACTaGAGCTTGGCTTTGACAGCA +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSEAATVD*SLALTA
Trigger: TGCTGTCAAAGCCAAGCTCAAGTCCACTGTTGCGGC...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTTTTGCTTCAGCGACTaGGTGGCCGCCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSFCFSD*VAACFS
Trigger: AGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAAAA...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTGCAGCTTCCTGCGGTaGGCGTTGATGCGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFCSFLR*ALMRWD
Trigger: GTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATTTCCTCTCCTGAGTTaGCTCTTGAGGGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: WQAGKGREFSNGISSQTGFPLLS*LLRAFT
Trigger: GGTGAACGCCCTCAAGAGCAAACTCAGGAGAGGAAA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS TCA 90 bp CTCCTGCCGGCTCTTCTCCTCTTTCTTCAGCCTCACCTCCAGCTCTaGGATCATAGACTCATGCTTGCTCTTCAGCTTTGTGAGGTTTTT +
Preference number: 5 (lower is better)
Translates to: LLPALLLFLQPHLQL*DHRLMLALQLCEVF
Trigger: AAAAACCTCACAAAGCTGAAGAGCAAGCATGAGTCTATGATCTCAGAGCTGGAGGTGAGGCTGAAGAAAGAGGAGAAGAGCCGGCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 90 bp TCCTCTTCATTGAAGCCCATGATAGACATGGCTTCCAGTGTCTCCTaGAACATCTCATCATCTTGTGCAGCTGGGATGGGCACAAAGCCA +
Preference number: 5 (lower is better)
Translates to: SSSLKPMIDMASSVS*NISSSCAAGMGTKP
Trigger: TGGCTTTGTGCCCATCCCAGCTGCACAAGATGATGAGATGTTCCAGGAGACACTGGAAGCCATGTCTATCATGGGCTTCAATGAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 90 bp ATATGGCCCTCTAGCTCGCGAATCTTCTTTAGGGCATTGTTTTTCTaGGCGATCTCTTCATCAAGCCTGGCTAGAGCTGCCTGTAGCTCT +
Preference number: 5 (lower is better)
Translates to: IWPSSSRIFFRALFF*AISSSSLARAACSS
Trigger: AGAGCTACAGGCAGCTCTAGCCAGGCTTGATGAAGAGATCGCCCAGAAAAACAATGCCCTAAAGAAGATTCGCGAGCTAGAGGGCCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 90 bp GCAAAAGATGGACCTTGCGTGATGCTGCTGTCTTTCTTGCCCTTGTaGGAGGATGCCACCACAGCCAAGTACTGTATGACTTTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: AKDGPCVMLLSFLPL*EDATTAKYCMTFFV
Trigger: CACAAAGAAAGTCATACAGTACTTGGCTGTGGTGGCATCCTCCCACAAGGGCAAGAAAGACAGCAGCATCACGCAAGGTCCATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCAGCACAGAGGCCTCATaGAGGCACGTCAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFSTEAS*RHVSSA
Trigger: GGCAGAGCTGACGTGCCTCAATGAGGCCTCTGTGCT...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGCTGTCTTTCTTGCCCTaGTGGGAGGATGCCACCACA +
Preference number: 5 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVLSFLP*WEDATT
Trigger: TGTGGTGGCATCCTCCCACAAGGGCAAGAAAGACAG...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCCCTCCAGGATTGGGTTaGCCTGTAGAAGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSPPGLG*PVEAAF
Trigger: AAAAGCAGCTTCTACAGGCAAACCCAATCCTGGAGG...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGTTGACGGTTTTCGCATaGCCGAAAGCCTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKLTVFA*PKASRI
Trigger: AATCCTGGAGGCTTTCGGCAATGCGAAAACCGTCAA...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAACCCTGCCGATGGGTCTaGTCCAAGGCCTTGTTTACA +
Preference number: 5 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKPCRWV*SKALFT
Trigger: TGTAAACAAGGCCTTGGACAAGACCCATCGGCAGGG...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAAGGTCAGCCACAAACTaGTCAGAGGAGGCATTGAGG +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKRSATN*SEEALR
Trigger: CCTCAATGCCTCCTCTGACAAGTTTGTGGCTGACCT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCGAGCTCTCAGTCATCTaGGCCATCTGGTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFELSVI*AIWSSP
Trigger: GGGGCTGGACCAGATGGCCAAGATGACTGAGAGCTC...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGCGTTGCCGGAACTCTaGGAAGACAATCCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKALPEL*EDNPVG
Trigger: CCCAACAGGATTGTCTTCCAAGAGTTCCGGCAACGC...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATTCTGCTGCCGCTCCTaGATCTTTTGCATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKFCCRS*IFCISS
Trigger: GGAGGAGATGCAAAAGATCAAGGAGCGGCAGCAGAA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTCATCCTCCAGTTTCTaGATCTTGGCCTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVSSSSF*ILASAV
Trigger: CACGGCTGAGGCCAAGATCAAGAAACTGGAGGATGA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATTTGCCTTGGCCCTTTaGAACTGCTCCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKFALAL*NCSSCS
Trigger: AGAGCAGCTGGAGCAGTTCAAAAGGGCCAAGGCAAA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAAGGGAAGCCACATCTTaGGCCAGTTTGATGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGREATS*ASLMAL
Trigger: CAAAGCCATCAAACTGGCCAAAGATGTGGCTTCCCT...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGAGGGAAGCCACATCTTaGGCCAGTTTGATGGCTTTG +
Preference number: 5 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKREATS*ASLMAL
Trigger: CAAAGCCATCAAACTGGCCAAAGATGTGGCTTCCCT...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAATGGCGCTCCAGGTTTaGCTTAGCCTCCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKMALQV*LSLHLL
Trigger: GAGGAGATGGAGGCTAAGCAAAACCTGGAGCGCCAT...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGCTTCTTTTCCAGATaGGATACCAGTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSCFFSR*DTSCRW
Trigger: CCAGCGGCAACTGGTATCCAATCTGGAAAAGAAGCA...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCCTCTCATCCGCATACTaGGAGGAGATGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSLSSAY*EEMFFS
Trigger: GGAGAAGAACATCTCCTCCAAGTATGCGGATGAGAG...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATCAGCTTTGAGCATCTaGTTGGTCCTCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: WQAGKGREFSNGISSQTGSALSI*LVLSSS
Trigger: AGAGCTGGAGAGGACCAACAAGATGCTCAAAGCTGA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATCAGCTTTGAGCATCTaGTTGGTCCTCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGSALSI*LVLSSS
Trigger: AGAGCTGGAGAGGACCAACAAGATGCTCAAAGCTGA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATTGCCTACATCATCCTaGGAGCTGACCAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSELPTSS*ELTRSS
Trigger: GGAAGACCTGGTCAGCTCCAAGGATGATGTAGGCAA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAAGTTTTCGAAGCTGCTaGATGGCTTCCTCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSFRSC*MASSLP
Trigger: AGGGAGGGAGGAAGCCATCAAGCAGCTTCGAAAACT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTGCTGCCAGGTCCTCTaGGAGCTGCATGAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGCCQVL*ELHEVC
Trigger: GCAGACCTCATGCAGCTCCAAGAGGACCTGGCAGCA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGGACTTGAGCTTGGCTTaGACAGCACCTTCTACCTCC +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVDLSLA*TAPSTS
Trigger: GGAGGTAGAAGGTGCTGTCAAAGCCAAGCTCAAGTC...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAACAGTGGACTTGAGCTaGGCTTTGACAGCACCTTCT +
Preference number: 5 (lower is better)
Translates to: WQAGKGREFSNGISSQTGTVDLS*ALTAPS
Trigger: AGAAGGTGCTGTCAAAGCCAAGCTCAAGTCCACTGT...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATTTTGCTTCAGCGACTaGGTGGCCGCCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKFCFSD*VAACFS
Trigger: AGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAAAA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCTGCCTCTTCAGCTGCTaGACCTTGGTGTTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSCLFSC*TLVFPF
Trigger: GAAAGGAAACACCAAGGTCAAGCAGCTGAAGAGGCA...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGATGCCTCTTCAGCTGCTaGACCTTGGTGTTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGCLFSC*TLVFPF
Trigger: GAAAGGAAACACCAAGGTCAAGCAGCTGAAGAGGCA...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGATGCCTCTTCAGCTGCTaGACCTTGGTGTTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: WQAGKGREFSNGISSQTGCLFSC*TLVFPF
Trigger: GAAAGGAAACACCAAGGTCAAGCAGCTGAAGAGGCA...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS CCA 90 bp TTTCCCTGGCCTCTGCTTCAGCTCGGTCTCTCTCATCCGCATACTTaGAGGAGATGTTCTTCTCCTCAGCTAACAACTGGTCAAATTTCT +
Preference number: 5 (lower is better)
Translates to: FPWPLLQLGLSHPHT*RRCSSPQLTTGQIS
Trigger: AGAAATTTGACCAGTTGTTAGCTGAGGAGAAGAACATCTCCTCCAAGTATGCGGATGAGAGAGACCGAGCTGAAGCAGAGGCCAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATTGACGGTTTTCGCATaGCCGAAAGCCTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKLTVFA*PKASRI
Trigger: AATCCTGGAGGCTTTCGGCAATGCGAAAACCGTCAA...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCCGGAACATGCCCTTTTaGGTCTTGGAGGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFRNMPF*VLEALG
Trigger: GCCCAGTGCCTCCAAGACCAAAAAGGGCATGTTCCG...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGTCAAGTTCGAGGGCTTaGATCATGAGAATGCAGGCT +
Preference number: 5 (lower is better)
Translates to: AGRKGKGIFKRDFLPNWKSSSRA*IMRMQA
Trigger: AGCCTGCATTCTCATGATCAAAGCCCTCGAACTTGA...CTTCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GGGAGTGGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAATCATAGACTCATGCTaGCTCTTCAGCTTTGTGAGG +
Preference number: 5 (lower is better)
Translates to: GSGLGAVAPIHVTSSFHVIIDSC*LFSFVR
Trigger: CCTCACAAAGCTGAAGAGCAAGCATGAGTCTATGAT...TACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCCACTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTCCCCATCACTGCACTaGGACTGCAGATCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFSPSLH*DCRSCS
Trigger: GCTGCAGGATCTGCAGTCCAAGTGCAGTGATGGGGA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAAGCTTGGTAGACACATaGAGCTTCTGCCGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKSLVDT*SFCRVS
Trigger: AGAAACCCGGCAGAAGCTCAATGTGTCTACCAAGCT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATGCTTCTTTTCCAGATaGGATACCAGTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSECFFSR*DTSCRW
Trigger: CCAGCGGCAACTGGTATCCAATCTGGAAAAGAAGCA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACTCTCATCCGCATACTaGGAGGAGATGTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSELSSAY*EEMFFS
Trigger: GGAGAAGAACATCTCCTCCAAGTATGCGGATGAGAG...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAGCTTTGAGCATCTTGTaGGTCCTCTCCAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKALSIL*VLSSSS
Trigger: AGAAGAGCTGGAGAGGACCAACAAGATGCTCAAAGC...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGAAAGGGAAGGGAATTTTCAAACGGGATTTCCTCCCAAACTGGAAGTTCATGCACGTTCTaGCCTACATCATCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: WQAGKGREFSNGISSQTGSSCTF*PTSSLE
Trigger: CTCCAAGGATGATGTAGGCAAGAACGTGCATGAACT...TCCAGTTTGGGAGGAAATCCCGTTTGAAAATTCCCTTCCCTTTCCTGCCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTTGAGGGCCTGCATGTaGACCTCTAGCCGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGLRACM*TSSRSL
Trigger: CAAGCTGCGGCTAGAGGTCAACATGCAGGCCCTCAA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTTGAGGGCCTGCATGTaGACCTCTAGCCGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFLRACM*TSSRSL
Trigger: CAAGCTGCGGCTAGAGGTCAACATGCAGGCCCTCAA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGACAGTGGACTTGAGCTaGGCTTTGACAGCACCTTCT +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVTVDLS*ALTAPS
Trigger: AGAAGGTGCTGTCAAAGCCAAGCTCAAGTCCACTGT...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCACCTCCTTTAGCTTCTaGTCCTTTTGCTTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSTSFSF*SFCFSD
Trigger: GTCGCTGAAGCAAAAGGACAAGAAGCTAAAGGAGGT...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGTTCAGCTGCTTGACCTaGGTGTTTCCTTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVFSCLT*VFPFSA
Trigger: GGCAGAGAAAGGAAACACCAAGGTCAAGCAGCTGAA...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCAGAACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAGTGTTTCGCTCCTTCTaGAAGACAATGTTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SEPSVFSITLRPPALLEGVFRSF*KTMFPS
Trigger: GCTTGGAAACATTGTCTTCAAGAAGGAGCGAAACAC...TCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp AGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGGTTGACTCCGTGTTTCGCTCCTTCTaGAAGACAATGTTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SPSKNLNSHPLCRAVVDSVFRSF*KTMFPS
Trigger: GCTTGGAAACATTGTCTTCAAGAAGGAGCGAAACAC...GGAGTCAACCACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAAGGAGTGATGTCACATaGTCATTTAGCGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSERSDVT*SFSGSM
Trigger: CATGGACCCGCTAAATGACAATGTGACATCACTCCT...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAAAGTTAGGCGTGGTATaGCGCAGTGTAGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKKLGVV*RSVVIS
Trigger: ACTGATGACTACACTGCGCAATACCACGCCTAACTT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCGCGTTGCCGGAACTCTaGGAAGACAATCCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFALPEL*EDNPVG
Trigger: CCCAACAGGATTGTCTTCCAAGAGTTCCGGCAACGC...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAATCAAGTTCGAGGGCTTaGATCATGAGAATGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSESSSRA*IMRMQA
Trigger: AGCCTGCATTCTCATGATCAAAGCCCTCGAACTTGA...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TTCTCTGATAGCCCATCTAAGAACTTGAATTCACACCCTTTGTGCAGGGCTGTGTTCTCCAGTGTCTGCTaGCTTTTGTCCAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: FSDSPSKNLNSHPLCRAVFSSVC*LLSRFA
Trigger: GGCAAACCTGGACAAAAGCAAGCAGACACTGGAGAA...CACAGCCCTGCACAAAGGGTGTGAATTCAAGTTCTTAGATGGGCTATCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAATCAGCTTTGAGCATCTaGTTGGTCCTCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKSALSI*LVLSSS
Trigger: AGAGCTGGAGAGGACCAACAAGATGCTCAAAGCTGA...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAAGTTCATGCACGTTCTaGCCTACATCATCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSESSCTF*PTSSLE
Trigger: CTCCAAGGATGATGTAGGCAAGAACGTGCATGAACT...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCACCTCTAGCCGCAGCTaGGCATCCTCAGTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCTSSRS*ASSVAC
Trigger: GCAGGCCACTGAGGATGCCAAGCTGCGGCTAGAGGT...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR CAA 90 bp ACCATCTGTGTTTTCAATAACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAAACCTCCTTTAGCTTCTaGTCCTTTTGCTTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: TICVFNNSTAPSPSGRNKTSFSF*SFCFSD
Trigger: GTCGCTGAAGCAAAAGGACAAGAAGCTAAAGGAGGT...TTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTTATTGAAAACACAGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGGCTTTGGTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAAAGCTGTTCCTCTTCATaGAAGCCCATGATAGACATG +
Preference number: 5 (lower is better)
Translates to: LALVPLKSESRASISSSESCSSS*KPMIDM
Trigger: CATGTCTATCATGGGCTTCAATGAAGAGGAACAGCT...TTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAACCAAAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp GGGTTGGGGGCTGTGGCACCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTCGGAAGAAGATTTaGCTCTGCCCAATCCTGTAC +
Preference number: 5 (lower is better)
Translates to: GLGAVAPIHVTSSFHVNKVRKKI*LCPILY
Trigger: GTACAGGATTGGGCAGAGCAAAATCTTCTTCCGAAC...TTTGTTTACATGAAATGAGGAAGTTACATGAATGGGTGCCACAGCCCCCAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGAGTCCCGAGCGTCCATTTCTTCTTCAGAACCATCTGTGATCATAGACTCATGCTaGCTCTTCAGCTTTGTGAGG +
Preference number: 5 (lower is better)
Translates to: VPLKSESRASISSSEPSVIIDSC*LFSFVR
Trigger: CCTCACAAAGCTGAAGAGCAAGCATGAGTCTATGAT...CACAGATGGTTCTGAAGAAGAAATGGACGCTCGGGACTCAGACTTCAATGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCGCTGAATGTTCAGTGTaGAGACATGGCGCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFAECSV*RHGAPG
Trigger: ACCTGGAGCGCCATGTCTCAACACTGAACATTCAGC...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCTTGCCTACATCATCCTaGGAGCTGACCAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGLPTSS*ELTRSS
Trigger: GGAAGACCTGGTCAGCTCCAAGGATGATGTAGGCAA...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTTCTCTGCCTGCTCCTaGTACTGCTCTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFFSACS*YCSAIL
Trigger: CAAGATGGCAGAGCAGTACAAGGAGCAGGCAGAGAA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATTCCTGCGGTTGGCGTaGATGCGCTGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSFLRLA*MRWDSS
Trigger: GGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS GCA 90 bp TCCTCTTTCTTCAGCCTCACCTCCAGCTCTGAGATCATAGACTCATaGTTGCTCTTCAGCTTTGTGAGGTTTTTAGCCTTTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SSFFSLTSSSEIIDS*LLFSFVRFLAFSSS
Trigger: AGAGGAAGAAAAGGCTAAAAACCTCACAAAGCTGAAGAGCAAGCATGAGTCTATGATCTCAGAGCTGGAGGTGAGGCTGAAGAAAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 90 bp GAGGAGATGTTCTTCTCCTCAGCTAACAACTGGTCAAATTTCTTCTaGTTCTTTTCCAGATTGGATACCAGTTGCCGCTGGTTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: EEMFFSSANNWSNFF*FFSRLDTSCRWLSK
Trigger: CTTGGACAACCAGCGGCAACTGGTATCCAATCTGGAAAAGAAGCAGAAGAAATTTGACCAGTTGTTAGCTGAGGAGAAGAACATCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCCCTCCAGGATTGGGTTaGCCTGTAGAAGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFPPGLG*PVEAAF
Trigger: AAAAGCAGCTTCTACAGGCAAACCCAATCCTGGAGG...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCGTCTTGTCCAAGGCCTaGTTTACACGGCTGAGAATC +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFVLSKA*FTRLRI
Trigger: GATTCTCAGCCGTGTAAACAAGGCCTTGGACAAGAC...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCAGCAATGGCTTTACTTaGGTGAAGAGCCGCCACCAT +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFSNGFT*VKSRHH
Trigger: ATGGTGGCGGCTCTTCACCAAAGTAAAGCCATTGCT...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATTCTGCTTCTCGGCCTaGTTCCTGGCAGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSFCFSA*FLAARS
Trigger: AGAGCGGGCTGCCAGGAACAAGGCCGAGAAGCAGAA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCTTCTCCAGTGTCTGCTaGCTTTTGTCCAGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFFSSVC*LLSRFA
Trigger: GGCAAACCTGGACAAAAGCAAGCAGACACTGGAGAA...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCCCAGTGACATCGAAGTaGATGCGAATGAACTTGCCA +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFPVTSK*MRMNLP
Trigger: TGGCAAGTTCATTCGCATCAACTTCGATGTCACTGG...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp TCTGTTTTCCCTGACATGGTGTCCAATCCTGAATTTATTCACTGGCTTTGGTTCGTTCGGAAGAAGATTTaGCTCTGCCCAATCCTGTAC +
Preference number: 5 (lower is better)
Translates to: SVFPDMVSNPEFIHWLWFVRKKI*LCPILY
Trigger: GTACAGGATTGGGCAGAGCAAAATCTTCTTCCGAAC...GAACCAAAGCCAGTGAATAAATTCAGGATTGGACACCATGTCAGGGAAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230397.2
CDS-3UTR CAA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATTGAGGGCCTGCATGTaGACCTCTAGCCGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSLRACM*TSSRSL
Trigger: CAAGCTGCGGCTAGAGGTCAACATGCAGGCCCTCAA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCACGTTCAAACTGGCCCTaGAGGGCCTGCATGTTGACC +
Preference number: 5 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSRSNWP*RACMLT
Trigger: GGTCAACATGCAGGCCCTCAAGGGCCAGTTTGAACG...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCACTCCTGAGTTTGCTCTaGAGGGCGTTCACCTCACGG +
Preference number: 5 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSLLSLL*RAFTSR
Trigger: CCGTGAGGTGAACGCCCTCAAGAGCAAACTCAGGAG...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CCCATTCATGTAACTTCCTCATTTCATGTAAACAAAGTTGCTGGTGACTGTGGCAGCTGTTCCTCTTCATaGAAGCCCATGATAGACATG +
Preference number: 5 (lower is better)
Translates to: PIHVTSSFHVNKVAGDCGSCSSS*KPMIDM
Trigger: CATGTCTATCATGGGCTTCAATGAAGAGGAACAGCT...GCCACAGTCACCAGCAACTTTGTTTACATGAAATGAGGAAGTTACATGAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATTTGCCTTGGCCCTTTaGAACTGCTCCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSFALAL*NCSSCS
Trigger: AGAGCAGCTGGAGCAGTTCAAAAGGGCCAAGGCAAA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp ACTTACAACCTTTTATTAGTGAAAGTGACCATGGGTGCAAATAAGTGTGATTGCAGGAGTGATGTCACATaGTCATTTAGCGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: TYNLLLVKVTMGANKCDCRSDVT*SFSGSM
Trigger: CATGGACCCGCTAAATGACAATGTGACATCACTCCT...GCAATCACACTTATTTGCACCCATGGTCACTTTCACTAATAAAAGGTTGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090287.5
CDS-3UTR CAA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAAGCAATGGCTTTACTTaGGTGAAGAGCCGCCACCAT +
Preference number: 5 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSSNGFT*VKSRHH
Trigger: ATGGTGGCGGCTCTTCACCAAAGTAAAGCCATTGCT...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAGCTTTGAGCATCTTGTaGGTCCTCTCCAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSALSIL*VLSSSS
Trigger: AGAAGAGCTGGAGAGGACCAACAAGATGCTCAAAGC...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCATCAAGTTCGAGGGCTTaGATCATGAGAATGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSSSSRA*IMRMQA
Trigger: AGCCTGCATTCTCATGATCAAAGCCCTCGAACTTGA...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS-3UTR CAA 90 bp CTGTACGTCTTATTTGGATTTTTCTCTGATAGCCCATCTAAGAACTTGAATTCAAGCTGTTCCTCTTCATaGAAGCCCATGATAGACATG +
Preference number: 5 (lower is better)
Translates to: LYVLFGFFSDSPSKNLNSSCSSS*KPMIDM
Trigger: CATGTCTATCATGGGCTTCAATGAAGAGGAACAGCT...TGAATTCAAGTTCTTAGATGGGCTATCAGAGAAAAATCCAAATAAGACGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS CAA 72 bp GTGGCCTCATCTAGCTCCCGCTGCAGCTTCCTGCGGTaGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: VASSSSRCSFLR*ALMRWDSSSAS
Trigger: AGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCGGGAGCTAGATGAGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS TCA 72 bp TGGCGCTCCAGCTGTTGCCGTGCGCTCTCATTCTTCTaGGCCGTGCTGCGTTCTGTGGCCAGCTCATTGCTC +
Preference number: 6 (lower is better)
Translates to: WRSSCCRALSFF*AVLRSVASSLL
Trigger: GAGCAATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGAATGAGAGCGCACGGCAACAGCTGGAGCGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp CTCCAGGTCAGCTTGCTTGCGAGCTCTCTCAGCTGCTaGCAGGTCCTCTTGGAGCTGCATGAGGTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: LQVSLLASSLSC*QVLLELHEVCL
Trigger: GAGGCAGACCTCATGCAGCTCCAAGAGGACCTGGCAGCAGCTGAGAGAGCTCGCAAGCAAGCTGACCTGGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp CTTCTCCAGGTCAGCTTGCTTGCGAGCTCTCTCAGCTaGTGCCAGGTCCTCTTGGAGCTGCATGAGGTCTGC +
Preference number: 6 (lower is better)
Translates to: LLQVSLLASSLS*CQVLLELHEVC
Trigger: GCAGACCTCATGCAGCTCCAAGAGGACCTGGCAGCAGCTGAGAGAGCTCGCAAGCAAGCTGACCTGGAGAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp CGAGCTCTCTCAGCTGCTGCCAGGTCCTCTTGGAGCTaGATGAGGTCTGCCTCCAGACTCTTGGCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: RALSAAARSSWS*MRSASRLLAFF
Trigger: GAAGAAAGCCAAGAGTCTGGAGGCAGACCTCATGCAGCTCCAAGAGGACCTGGCAGCAGCTGAGAGAGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp GCCGTGCTGCGTTCTGTGGCCAGCTCATTGCTCAGTTaGTCAGCCTGCAGTGTGGCCTTGCGTACTCTATCA +
Preference number: 6 (lower is better)
Translates to: AVLRSVASSLLS*SACSVALRTLS
Trigger: TGATAGAGTACGCAAGGCCACACTGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAGAACGCAGCACGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp TCTTCTGAGCCGTGCTGCGTTCTGTGGCCAGCTCATTaGTCAGTTGCTCAGCCTGCAGTGTGGCCTTGCGTA +
Preference number: 6 (lower is better)
Translates to: SSEPCCVLWPAH*SVAQPAVWPCV
Trigger: TACGCAAGGCCACACTGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp GCTGTTGCCGTGCGCTCTCATTCTTCTGAGCCGTGCTaGGTTCTGTGGCCAGCTCATTGCTCAGTTGCTCAG +
Preference number: 6 (lower is better)
Translates to: AVAVRSHSSEPC*VLWPAHCSVAQ
Trigger: CTGAGCAACTGAGCAATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGAATGAGAGCGCACGGCAACAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp CCAGCTGTTGCCGTGCGCTCTCATTCTTCTGAGCCGTaGTGCGTTCTGTGGCCAGCTCATTGCTCAGTTGCT +
Preference number: 6 (lower is better)
Translates to: PAVAVRSHSSEP*CVLWPAHCSVA
Trigger: AGCAACTGAGCAATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGAATGAGAGCGCACGGCAACAGCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 72 bp TGCCTCCTCTTCTCCTCATTCTGTTCATCCCGAGCCTaGAGATCGCGTTCAAACTGGCCCTTGAGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: CLLFSSFCSSRA*RSRSNWPLRAC
Trigger: GCAGGCCCTCAAGGGCCAGTTTGAACGCGATCTCCAGGCTCGGGATGAACAGAATGAGGAGAAGAGGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 72 bp GTGCGCTCTCATTCTTCTGAGCCGTGCTGCGTTCTGTaGCCAGCTCATTGCTCAGTTGCTCAGCCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: VRSHSSEPCCVL*PAHCSVAQPAV
Trigger: CACTGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGAATGAGAGCGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 72 bp GCCTCCAGCGCCGCAACAGTGGACTTGAGCTTGGCTTaGACAGCACCTTCTACCTCCTGCAACTTGCTTCGC +
Preference number: 6 (lower is better)
Translates to: ASSAATVDLSLA*TAPSTSCNLLR
Trigger: GCGAAGCAAGTTGCAGGAGGTAGAAGGTGCTGTCAAAGCCAAGCTCAAGTCCACTGTTGCGGCGCTGGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 90 bp TCCCCAGCCAGGTCCGCGTTCTCCTTCTCCAGTGTCTGCTTGCTTTaGTCCAGGTTTGCCTTGGCCCTTTTGAACTGCTCCAGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: SPARSAFSFSSVCLL*SRFALALLNCSSCS
Trigger: AGAGCAGCTGGAGCAGTTCAAAAGGGCCAAGGCAAACCTGGACAAAAGCAAGCAGACACTGGAGAAGGAGAACGCGGACCTGGCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 90 bp AGCATGCCAGTGACACTCTCCACTTCATTCTGTAGCTTGTGGACCTaGTCACTGAGCTCAGCCCGGGCACGCTCCCCATCACTGCACTTG +
Preference number: 6 (lower is better)
Translates to: SMPVTLSTSFCSLWT*SLSSARARSPSLHL
Trigger: CAAGTGCAGTGATGGGGAGCGTGCCCGGGCTGAGCTCAGTGACAAGGTCCACAAGCTACAGAATGAAGTGGAGAGTGTCACTGGCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 90 bp GCCTCATTGAGCATGCCAGTGACACTCTCCACTTCATTCTGTAGCTaGTGGACCTTGTCACTGAGCTCAGCCCGGGCACGCTCCCCATCA +
Preference number: 6 (lower is better)
Translates to: ASLSMPVTLSTSFCS*WTLSLSSARARSPS
Trigger: TGATGGGGAGCGTGCCCGGGCTGAGCTCAGTGACAAGGTCCACAAGCTACAGAATGAAGTGGAGAGTGTCACTGGCATGCTCAATGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp CGTTCTGTGGCCAGCTCATTGCTCAGTTGCTCAGCCTaGAGTGTGGCCTTGCGTACTCTATCACTCATGGCC +
Preference number: 6 (lower is better)
Translates to: RSVASSLLSCSA*SVALRTLSLMA
Trigger: GGCCATGAGTGATAGAGTACGCAAGGCCACACTGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAGAACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 72 bp ATGCCAGTGACACTCTCCACTTCATTCTGTAGCTTGTaGACCTTGTCACTGAGCTCAGCCCGGGCACGCTCC +
Preference number: 6 (lower is better)
Translates to: MPVTLSTSFCSL*TLSLSSARARS
Trigger: GGAGCGTGCCCGGGCTGAGCTCAGTGACAAGGTCCACAAGCTACAGAATGAAGTGGAGAGTGTCACTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 72 bp TCCAGCTCCCCCGTGATGCTGCTGTCTTTCTTGCCCTaGTGGGAGGATGCCACCACAGCCAAGTACTGTATG +
Preference number: 6 (lower is better)
Translates to: SSSPVMLLSFLP*WEDATTAKYCM
Trigger: CATACAGTACTTGGCTGTGGTGGCATCCTCCCACAAGGGCAAGAAAGACAGCAGCATCACGGGGGAGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
CDS CAA 72 bp AGCATGCCAGTGACACTCTCCACTTCATTCTGTAGCTaGTGGACCTTGTCACTGAGCTCAGCCCGGGCACGC +
Preference number: 6 (lower is better)
Translates to: SMPVTLSTSFCS*WTLSLSSARAR
Trigger: GCGTGCCCGGGCTGAGCTCAGTGACAAGGTCCACAAGCTACAGAATGAAGTGGAGAGTGTCACTGGCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 90 bp ATTCTTCTGAGCCGTGCTGCGTTCTGTGGCCAGCTCATTGCTCAGTaGCTCAGCCTGCAGTGTGGCCTTGCGTACTCTATCACTCATGGC +
Preference number: 6 (lower is better)
Translates to: ILLSRAAFCGQLIAQ*LSLQCGLAYSITHG
Trigger: GCCATGAGTGATAGAGTACGCAAGGCCACACTGCAGGCTGAGCAACTGAGCAATGAGCTGGCCACAGAACGCAGCACGGCTCAGAAGAAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS TCA 72 bp TCCTCCTCCAGTTGCTCCTCCAGGTCTAGCATCTGCTaGGCCATCTTCTTCCTCTCAGCCTGTAGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SSSSCSSRSSIC*AIFFLSACSCW
Trigger: CCAGCAACTACAGGCTGAGAGGAAGAAGATGGCTCAGCAGATGCTAGACCTGGAGGAGCAACTGGAGGAGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp TCTCAGTCATCTTGGCCATCTGGTCCAGCCCCACAATaGGGTCCACATCCTTCCACAGGTCAGCCACAAACT +
Preference number: 6 (lower is better)
Translates to: SQSSWPSGPAPQ*GPHPSTGQPQT
Trigger: AGTTTGTGGCTGACCTGTGGAAGGATGTGGACCGCATTGTGGGGCTGGACCAGATGGCCAAGATGACTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp AGTTCTGTCTCATACTCGTGCAGCTGCCGCTGTAGCTaGCTCCTCTTCTCCTCATTCTGTTCATCCCGAGCC +
Preference number: 6 (lower is better)
Translates to: SSVSYSCSCRCS*LLFSSFCSSRA
Trigger: GGCTCGGGATGAACAGAATGAGGAGAAGAGGAGGCAGCTACAGCGGCAGCTGCACGAGTATGAGACAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 72 bp AGCTCCCCCGTGATGCTGCTGTCTTTCTTGCCCTTGTaGGAGGATGCCACCACAGCCAAGTACTGTATGACT +
Preference number: 6 (lower is better)
Translates to: SSPVMLLSFLPL*EDATTAKYCMT
Trigger: AGTCATACAGTACTTGGCTGTGGTGGCATCCTCCCACAAGGGCAAGAAAGACAGCAGCATCACGGGGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
CDS CCA 72 bp TGGCCAGCTCATTGCTCAGTTGCTCAGCCTGCAGTGTaGCCTTGCGTACTCTATCACTCATGGCCTCCATGT +
Preference number: 6 (lower is better)
Translates to: WPAHCSVAQPAV*PCVLYHSWPPC
Trigger: ACATGGAGGCCATGAGTGATAGAGTACGCAAGGCCACACTGCAGGCTGAGCAACTGAGCAATGAGCTGGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 72 bp TCTACCTCCTGCAACTTGCTTCGCAGTTCCTTGTTCTaGCGCTCCAGCTGTTGCCGTGCGCTCTCATTCTTC +
Preference number: 6 (lower is better)
Translates to: STSCNLLRSSLF*RSSCCRALSFF
Trigger: GAAGAATGAGAGCGCACGGCAACAGCTGGAGCGCCAGAACAAGGAACTGCGAAGCAAGTTGCAGGAGGTAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 72 bp CCAGCCAGGTCCGCGTTCTCCTTCTCCAGTGTCTGCTaGCTTTTGTCCAGGTTTGCCTTGGCCCTTTTGAAC +
Preference number: 6 (lower is better)
Translates to: PARSAFSFSSVC*LLSRFALALLN
Trigger: GTTCAAAAGGGCCAAGGCAAACCTGGACAAAAGCAAGCAGACACTGGAGAAGGAGAACGCGGACCTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 72 bp ATTGAGCTTCTGCCGGGTTTCTTCTTGGAGCAGCTCTaGGGTGTCCTGAAGCTGGGATCCAAGGGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: IELLPGFFLEQL*GVLKLGSKGSH
Trigger: GTGGCTTCCCTTGGATCCCAGCTTCAGGACACCCAAGAGCTGCTCCAAGAAGAAACCCGGCAGAAGCTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS TCA 72 bp AGCTGGTCCTGCAGGCTGTTCCTTTCATCTTCCAACTaGCGCAGCTTGGTAGACACATTGAGCTTCTGCCGG +
Preference number: 6 (lower is better)
Translates to: SWSCRLFLSSSN*RSLVDTLSFCR
Trigger: CCGGCAGAAGCTCAATGTGTCTACCAAGCTGCGTCAGTTGGAAGATGAAAGGAACAGCCTGCAGGACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp TTGAGCTCTGCAATCTGGGCCTGCAAGTCAGCGATCTaGTCATGGAAGTCACTGGCATCACCCTCCAGTTTC +
Preference number: 6 (lower is better)
Translates to: LSSAIWACKSAI*SWKSLASPSSF
Trigger: GAAACTGGAGGGTGATGCCAGTGACTTCCATGAGCAGATCGCTGACTTGCAGGCCCAGATTGCAGAGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp TCCAGCTTCTTCTTAGCTGCCGCCGCCAGAGCTCTCTaGTTCCGTTCATCTTCCAGTTCTGTCTCATACTCG +
Preference number: 6 (lower is better)
Translates to: SSFFLAAAARAL*FRSSSSSVSYS
Trigger: CGAGTATGAGACAGAACTGGAAGATGAACGGAAGCAGAGAGCTCTGGCGGCGGCAGCTAAGAAGAAGCTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 72 bp GGACCTTGCGTGATGCTGCTGTCTTTCTTGCCCTTGTaGGAGGATGCCACCACAGCCAAGTACTGTATGACT +
Preference number: 6 (lower is better)
Translates to: GPCVMLLSFLPL*EDATTAKYCMT
Trigger: AGTCATACAGTACTTGGCTGTGGTGGCATCCTCCCACAAGGGCAAGAAAGACAGCAGCATCACGCAAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231567.2
CDS CAA 72 bp AGGTCCGCGTTCTCCTTCTCCAGTGTCTGCTTGCTTTaGTCCAGGTTTGCCTTGGCCCTTTTGAACTGCTCC +
Preference number: 6 (lower is better)
Translates to: RSAFSFSSVCLL*SRFALALLNCS
Trigger: GGAGCAGTTCAAAAGGGCCAAGGCAAACCTGGACAAAAGCAAGCAGACACTGGAGAAGGAGAACGCGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 72 bp CCAAGGGAAGCCACATCTTTGGCCAGTTTGATGGCTTaGCCCTCTGCCTCATTGAGCATGCCAGTGACACTC +
Preference number: 6 (lower is better)
Translates to: PREATSLASLMA*PSASLSMPVTL
Trigger: GAGTGTCACTGGCATGCTCAATGAGGCAGAGGGCAAAGCCATCAAACTGGCCAAAGATGTGGCTTCCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 72 bp AGCTGGGATCCAAGGGAAGCCACATCTTTGGCCAGTTaGATGGCTTTGCCCTCTGCCTCATTGAGCATGCCA +
Preference number: 6 (lower is better)
Translates to: SWDPREATSLAS*MALPSASLSMP
Trigger: TGGCATGCTCAATGAGGCAGAGGGCAAAGCCATCAAACTGGCCAAAGATGTGGCTTCCCTTGGATCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 72 bp ACAAATGAAGCCTCGTTTCCTCTCCTGAGTTTGCTCTaGAGGGCGTTCACCTCACGGCCCATGGCCTCATTG +
Preference number: 6 (lower is better)
Translates to: TNEASFPLLSLL*RAFTSRPMASL
Trigger: CAATGAGGCCATGGGCCGTGAGGTGAACGCCCTCAAGAGCAAACTCAGGAGAGGAAACGAGGCTTCATTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS CAA 72 bp GATGGACCTTGCGTGATGCTGCTGTCTTTCTTGCCCTaGTGGGAGGATGCCACCACAGCCAAGTACTGTATG +
Preference number: 6 (lower is better)
Translates to: DGPCVMLLSFLP*WEDATTAKYCM
Trigger: CATACAGTACTTGGCTGTGGTGGCATCCTCCCACAAGGGCAAGAAAGACAGCAGCATCACGCAAGGTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231567.2
CDS CAA 90 bp AGCTGGGATCCAAGGGAAGCCACATCTTTGGCCAGTTTGATGGCTTaGCCCTCTGCCTCATTGAGCATGCCAGTGACACTCTCCACTTCA +
Preference number: 6 (lower is better)
Translates to: SWDPREATSLASLMA*PSASLSMPVTLSTS
Trigger: TGAAGTGGAGAGTGTCACTGGCATGCTCAATGAGGCAGAGGGCAAAGCCATCAAACTGGCCAAAGATGTGGCTTCCCTTGGATCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS TCA 72 bp AACTCTACGGCCCCCAGCCCTTCTGGAAGGAACAAATaGAGCCTCGTTTCCTCTCCTGAGTTTGCTCTTGAG +
Preference number: 6 (lower is better)
Translates to: NSTAPSPSGRNK*SLVSSPEFALE
Trigger: CTCAAGAGCAAACTCAGGAGAGGAAACGAGGCTTCATTTGTTCCTTCCAGAAGGGCTGGGGGCCGTAGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000231567.2
CDS GCA 72 bp AGCCACATCTTTGGCCAGTTTGATGGCTTTGCCCTCTaGCTCATTGAGCATGCCAGTGACACTCTCCACTTC +
Preference number: 6 (lower is better)
Translates to: SHIFGQFDGFAL*LIEHASDTLHF
Trigger: GAAGTGGAGAGTGTCACTGGCATGCTCAATGAGGCAGAGGGCAAAGCCATCAAACTGGCCAAAGATGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 72 bp GCCTCTGCTTCAGCTCGGTCTCTCTCATCCGCATACTaGGAGGAGATGTTCTTCTCCTCAGCTAACAACTGG +
Preference number: 6 (lower is better)
Translates to: ASASARSLSSAY*EEMFFSSANNW
Trigger: CCAGTTGTTAGCTGAGGAGAAGAACATCTCCTCCAAGTATGCGGATGAGAGAGACCGAGCTGAAGCAGAGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 90 bp AGCTGCTTTTCCAGCTCCCCCGTGATGCTGCTGTCTTTCTTGCCCTaGTGGGAGGATGCCACCACAGCCAAGTACTGTATGACTTTCTTT +
Preference number: 6 (lower is better)
Translates to: SCFSSSPVMLLSFLP*WEDATTAKYCMTFF
Trigger: AAAGAAAGTCATACAGTACTTGGCTGTGGTGGCATCCTCCCACAAGGGCAAGAAAGACAGCAGCATCACGGGGGAGCTGGAAAAGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
CDS CAA 90 bp AGGTCTGAGATATGGCCCTCTAGCTCGCGAATCTTCTTTAGGGCATaGTTTTTCTGGGCGATCTCTTCATCAAGCCTGGCTAGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: RSEIWPSSSRIFFRA*FFWAISSSSLARAA
Trigger: GGCAGCTCTAGCCAGGCTTGATGAAGAGATCGCCCAGAAAAACAATGCCCTAAAGAAGATTCGCGAGCTAGAGGGCCATATCTCAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS TCA 72 bp TCTGTCACATTAATCCCCACGAGGTGGCAAACTTTCTaGGCCGCTGTGTTATCAGGCATGGATGCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: SVTLIPTRWQTF*AAVLSGMDAWS
Trigger: AGACCAGGCATCCATGCCTGATAACACAGCGGCTCAGAAAGTTTGCCACCTCGTGGGGATTAATGTGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 72 bp TTGAAGCCCATGATAGACATGGCTTCCAGTGTCTCCTaGAACATCTCATCATCTTGTGCAGCTGGGATGGGC +
Preference number: 6 (lower is better)
Translates to: LKPMIDMASSVS*NISSSCAAGMG
Trigger: GCCCATCCCAGCTGCACAAGATGATGAGATGTTCCAGGAGACACTGGAAGCCATGTCTATCATGGGCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 72 bp TCTTTCTTTGCCAGCTGCATCTTGAGCTCTGCAATCTaGGCCTGCAAGTCAGCGATCTGCTCATGGAAGTCA +
Preference number: 6 (lower is better)
Translates to: SFFASCILSSAI*ACKSAICSWKS
Trigger: TGACTTCCATGAGCAGATCGCTGACTTGCAGGCCCAGATTGCAGAGCTCAAGATGCAGCTGGCAAAGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 72 bp CGCTCTGAGTCTAGGTCCTCTTGTAGGTCTGAGATATaGCCCTCTAGCTCGCGAATCTTCTTTAGGGCATTG +
Preference number: 6 (lower is better)
Translates to: RSESRSSCRSEI*PSSSRIFFRAL
Trigger: CAATGCCCTAAAGAAGATTCGCGAGCTAGAGGGCCATATCTCAGACCTACAAGAGGACCTAGACTCAGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp GGTGAAGGCCTTTCTGGCAAGGTAGCCACGACACATTaGCTGGAAGGCCATGATGACATCAGTAATTTTCAG +
Preference number: 6 (lower is better)
Translates to: GEGLSGKVATTH*LEGHDDISNFQ
Trigger: CTGAAAATTACTGATGTCATCATGGCCTTCCAGGCAATGTGTCGTGGCTACCTTGCCAGAAAGGCCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CCA 72 bp TCTAGCTCGCGAATCTTCTTTAGGGCATTGTTTTTCTaGGCGATCTCTTCATCAAGCCTGGCTAGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: SSSRIFFRALFF*AISSSSLARAA
Trigger: GGCAGCTCTAGCCAGGCTTGATGAAGAGATCGCCCAGAAAAACAATGCCCTAAAGAAGATTCGCGAGCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 72 bp TCTTTGGCCAGTTTGATGGCTTTGCCCTCTGCCTCATaGAGCATGCCAGTGACACTCTCCACTTCATTCTGT +
Preference number: 6 (lower is better)
Translates to: SLASLMALPSAS*SMPVTLSTSFC
Trigger: ACAGAATGAAGTGGAGAGTGTCACTGGCATGCTCAATGAGGCAGAGGGCAAAGCCATCAAACTGGCCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 90 bp TTTTCCCTGGCCTCTGCTTCAGCTCGGTCTCTCTCATCCGCATACTaGGAGGAGATGTTCTTCTCCTCAGCTAACAACTGGTCAAATTTC +
Preference number: 6 (lower is better)
Translates to: FSLASASARSLSSAY*EEMFFSSANNWSNF
Trigger: GAAATTTGACCAGTTGTTAGCTGAGGAGAAGAACATCTCCTCCAAGTATGCGGATGAGAGAGACCGAGCTGAAGCAGAGGCCAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS GCA 72 bp TTCAGCCTCACCTCCAGCTCTGAGATCATAGACTCATaGTTGCTCTTCAGCTTTGTGAGGTTTTTAGCCTTT +
Preference number: 6 (lower is better)
Translates to: FSLTSSSEIIDS*LLFSFVRFLAF
Trigger: AAAGGCTAAAAACCTCACAAAGCTGAAGAGCAAGCATGAGTCTATGATCTCAGAGCTGGAGGTGAGGCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS CAA 72 bp AGCCTCACCTCCAGCTCTGAGATCATAGACTCATGCTaGCTCTTCAGCTTTGTGAGGTTTTTAGCCTTTTCT +
Preference number: 6 (lower is better)
Translates to: SLTSSSEIIDSC*LFSFVRFLAFS
Trigger: AGAAAAGGCTAAAAACCTCACAAAGCTGAAGAGCAAGCATGAGTCTATGATCTCAGAGCTGGAGGTGAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2
CDS TCA 72 bp TTTCTTCCTCTTCTGCTAGGTTGGTTGTCAAGTCGCTaGCCCTCTCTTCAAGGAGTTTTCGTTCTTTTGAAA +
Preference number: 6 (lower is better)
Translates to: FLPLLLGWLSSR*PSLQGVFVLLK
Trigger: TTTCAAAAGAACGAAAACTCCTTGAAGAGAGGGTCAGCGACTTGACAACCAACCTAGCAGAAGAGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090287.5
ENSMUST00000230397.2
ENSMUST00000231567.2