Pregenerated sensors for MYG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001285Ensembl transcript IDs: ENSMUST00000001331.13, ENSMUST00000113682.9, ENSMUST00000171244.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATaGGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: VRKGVLDLLELELQL*AALWVLGMESQSSP Trigger: GGGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| 3UTR-3UTR CCA 90 bp | CTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTAAAGAAAATTCCAGGTTaGTGGATCAGGGACTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LVPTEVRKGVLDLLELELKKIPG*WIRDWV Trigger: GACCCAGTCCCTGATCCACCAACCTGGAATTTTCTT...TAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCACTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| 3UTR-3UTR TCA 90 bp | CTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTAATCTCTCCAGCCAACTaGGATGGTTGTCAACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LVPTEVRKGVLDLLELELISPAN*DGCQLK Trigger: TTTCAGTTGACAACCATCTCAGTTGGCTGGAGAGAT...TAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCACTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTAAAATTCCAGGTTGGTaGATCAGGGACTGGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GRGCWISWSWSYSYELLCKIPGW*IRDWVS Trigger: ACTGACCCAGTCCCTGATCCACCAACCTGGAATTTT...ACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| 3UTR-3UTR CCA 90 bp | GTTACAGTTATGAGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCTCCAGCCAACTGAGATaGTTGTCAACTGAAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: VTVMSCFVGAGDGIPVLSSSQLR*LSTEKQ Trigger: TTGCTTTTCAGTTGACAACCATCTCAGTTGGCTGGA...GGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATAACTGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAATGTGTGTCTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTGGAGATGGTTGTCAACTaGAAAGCAAAGCACTTACAA | + |
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Preference number: 2 (lower is better) Translates to: TNVCLVPTEVRKGVLDLLEMVVN*KAKHLQ Trigger: TTGTAAGTGCTTTGCTTTTCAGTTGACAACCATCTC...CAGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCACTAGACACACATTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| 3UTR TCA 72 bp | GGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATaGGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAG | + |
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Preference number: 3 (lower is better) Translates to: GVLDLLELELQL*AALWVLGMESQ Trigger: CTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| 3UTR CCA 72 bp | CAGAGGTCAGGAAGGGGGTGTTGGATCTCCTGGAGCTaGAGTTACAGTTATGAGCTGCTTTGTGGGTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: QRSGRGCWISWS*SYSYELLCGCW Trigger: CCAGCACCCACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTGACCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| 3UTR CCA 72 bp | TGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTaGAGCTGGAGTTACAGTTATGAGCTGCTTTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: CPQRSGRGCWIS*SWSYSYELLCG Trigger: CCCACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| 3UTR-3UTR CAA 90 bp | CTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACCCACAACAACCATGTaGACTGCTGAGCTATCTCTC | + |
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Preference number: 3 (lower is better) Translates to: LVPTEVRKGVLDLLELELPTTTM*TAELSL Trigger: GAGAGATAGCTCAGCAGTCAACATGGTTGTTGTGGG...TAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCACTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| 3UTR GCA 72 bp | TGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTGGGTaGTGGGGATGGAATCCCAGTCCTCTCCCACAACAA | + |
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Preference number: 3 (lower is better) Translates to: WSWSYSYELLCG*WGWNPSPLPQQ Trigger: TTGTTGTGGGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATAACTGTAACTCCAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | GTTACAGTTATGAGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCACAGGTGCTGGGCGCTaGGCAAGGGTGGCACGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VTVMSCFVGAGDGIPVLSTGAGR*ARVARA Trigger: GGCCCGTGCCACCCTTGCCCAGCGCCCAGCACCTGT...GGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATAACTGTAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | CTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTATGCAAGAGGCACAGGTaGTGGGCGCTGGGCAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LVPTEVRKGVLDLLELELCKRHR*WALGKG Trigger: ACCCTTGCCCAGCGCCCAGCACCTGTGCCTCTTGCA...TAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCACTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | GTTACAGTTATGAGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCGGCGCTGGGCAAGGGTaGCACGGGCCATGTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VTVMSCFVGAGDGIPVLSGAGQG*HGPCSG Trigger: CCCTGAACATGGCCCGTGCCACCCTTGCCCAGCGCC...GGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATAACTGTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | AGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTGGGATGCGGTGCTGGGCTTaGAGAACTGACCGGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RGCWISWSWSYSYELLCGMRCWA*RTDRSG Trigger: GCCGCTCCGGTCAGTTCTCCAAGCCCAGCACCGCAT...CCCACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | ACAGTTATGAGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCCACTCCTTGGGTACGCACTaGACTCGCCACTGTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TVMSCFVGAGDGIPVLSHSLGTH*TRHCPA Trigger: GGCTGGACAGTGGCGAGTCCAGTGCGTACCCAAGGA...GTGGGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATAACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | CAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTAAGAGGCACAGGTGCTaGGCGCTGGGCAAGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: QEGGVGSPGAGVTVMSCFKRHRC*ALGKGG Trigger: GCCACCCTTGCCCAGCGCCCAGCACCTGTGCCTCTT...AAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | TACAAATGTGTGTCTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTTGGAAGGTGCCGTTGTaGGTCCCGATTCGGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: YKCVSSAHRGQEGGVGSPWKVPL*VPIRGG Trigger: ACCGCCCCGAATCGGGACGCACAACGGCACCTTCCA...AGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCACTAGACACACATTTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | ACAGTTATGAGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCCACGCACCCTCTCGAGTGTaGTGCCCACCAATGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TVMSCFVGAGDGIPVLSHAPSRV*CPPMKP Trigger: TGGCTTCATTGGTGGGCACCACACTCGAGAGGGTGC...GTGGGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATAACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR TCA 90 bp | ACAAATGTGTGTCTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTGCGGCTTTGGAATGAGTaGGGCTCCTTGGGTACGCAC | + |
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Preference number: 4 (lower is better) Translates to: TNVCLVPTEVRKGVLDLLRLWNE*GSLGTH Trigger: GTGCGTACCCAAGGAGCCTCACTCATTCCAAAGCCG...CAGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCACTAGACACACATTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR TCA 90 bp | ACAGTTATGAGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCCACAACCAGGGATCCCACTaGCTTGGTCCAGGGCCTTAT | + |
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Preference number: 4 (lower is better) Translates to: TVMSCFVGAGDGIPVLSHNQGSH*LGPGPY Trigger: ATAAGGCCCTGGACCAAGTCAGTGGGATCCCTGGTT...GTGGGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATAACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | GGTCAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCAGACAAGTCCCGCACTaGTCAGCTTGGTCTGCCATG | + |
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Preference number: 4 (lower is better) Translates to: GQEGGVGSPGAGVTVMSCRQVPH*SAWSAM Trigger: CATGGCAGACCAAGCTGAGCAGTGCGGGACTTGTCT...GCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | ACAAATGTGTGTCTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTGCCCTCTCGAGTGTGGTaGCCACCAATGAAGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: TNVCLVPTEVRKGVLDLLPSRVW*PPMKPL Trigger: CAGTGGCTTCATTGGTGGGCACCACACTCGAGAGGG...CAGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCACTAGACACACATTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | GGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTCCGAGGCTCCCCCTCTaGCCACTGAGAGATCCCATT | + |
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Preference number: 4 (lower is better) Translates to: GRGCWISWSWSYSYELLCPRLPL*PLRDPI Trigger: AATGGGATCTCTCAGTGGGCAGAGGGGGAGCCTCGG...ACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | TATGAGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCCACAACAACCGCACTGCTCAGCTTaGTCTGCCATGGCTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: YELLCGCWGWNPSPLPQQPHCSA*SAMAFQ Trigger: CTGGAAAGCCATGGCAGACCAAGCTGAGCAGTGCGG...TTGTTGTGGGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | GGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTCTAGTGCCCAGCAACTaGGCCAGGAGCTTACGTCCG | + |
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Preference number: 4 (lower is better) Translates to: GRGCWISWSWSYSYELLCLVPSN*ARSLRP Trigger: CGGACGTAAGCTCCTGGCCCAGTTGCTGGGCACTAG...ACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | TATGAGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCCACAACAAATGAGTGAGGCTCCTTaGGTACGCACTGGACTCGCC | + |
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Preference number: 4 (lower is better) Translates to: YELLCGCWGWNPSPLPQQMSEAP*VRTGLA Trigger: GGCGAGTCCAGTGCGTACCCAAGGAGCCTCACTCAT...TTGTTGTGGGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | TCCCAGTCCTCTCCCACAACAACCATGTTGACTGCTGAGCTATCTCTCCAGCCAGGGATCCCACTGACTTaGTCCAGGGCCTTATCCCGA | + |
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Preference number: 4 (lower is better) Translates to: SQSSPTTTMLTAELSLQPGIPLT*SRALSR Trigger: TCGGGATAAGGCCCTGGACCAAGTCAGTGGGATCCC...TGGCTGGAGAGATAGCTCAGCAGTCAACATGGTTGTTGTGGGAGAGGACTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | ACAAATGTGTGTCTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTGTCAGTGTGGTGGTCATaGCATACCGAGGCTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: TNVCLVPTEVRKGVLDLLSVWWS*HTEAPP Trigger: AGGGGGAGCCTCGGTATGCCATGACCACCACACTGA...CAGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCACTAGACACACATTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | GGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTGGGTGCTCCCGGGCACTCAGTGTaGTGGTCATGGCATACCGAG | + |
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Preference number: 4 (lower is better) Translates to: GVGSPGAGVTVMSCFVGAPGHSV*WSWHTE Trigger: CTCGGTATGCCATGACCACCACACTGAGTGCCCGGG...AGCACCCACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR TCA 90 bp | GGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTGGTCCATTGCTCGCCTaGACCCTGCCTCAGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GRGCWISWSWSYSYELLCGPLLA*TLPQCL Trigger: AAGACACTGAGGCAGGGTTCAGGCGAGCAATGGACC...ACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | TGCATGTACAAATGTGTGTCTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATGCTCGCCTGAACCCTaGCTCAGTGTCTTGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: CMYKCVSSAHRGQEGGVGCSPEP*LSVLVG Trigger: CCCAACCAAGACACTGAGGCAGGGTTCAGGCGAGCA...TCCAACACCCCCTTCCTGACCTCTGTGGGCACTAGACACACATTTGTACATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | GGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTGGGTGCTGGGCACTCAGTGTGGTaGTCATGGCATACCGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GVGSPGAGVTVMSCFVGAGHSVW*SWHTEA Trigger: AGCCTCGGTATGCCATGACCACCACACTGAGTGCCC...AGCACCCACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | CAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTCCTGCCTCAGTGTCTTaGTTGGGCTGGTTCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: QEGGVGSPGAGVTVMSCFPASVS*LGWFQV Trigger: CACCTGGAACCAGCCCAACCAAGACACTGAGGCAGG...AAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | GGTCAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTGGACTACAGCATTTaGAAGAGGCACAGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GQEGGVGSPGAGVTVMSCLDYSI*KRHRCW Trigger: CCAGCACCTGTGCCTCTTGCAAATGCTGTAGTCCAA...GCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | GGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTTTGTACCAGGTCCATTaGTCGCCTGAACCCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GRGCWISWSWSYSYELLCLYQVH*SPEPCL Trigger: GAGGCAGGGTTCAGGCGAGCAATGGACCTGGTACAA...ACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | TATGAGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCCACAACAAATGAAGCCACTGGCATaGACGAAGATGCAACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: YELLCGCWGWNPSPLPQQMKPLA*TKMQPG Trigger: CCCTGGTTGCATCTTCGTCCATGCCAGTGGCTTCAT...TTGTTGTGGGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR TCA 90 bp | AGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTGGGCACTTGAATCTACCTTaGATCTCTGGGCCAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RGCWISWSWSYSYELLCGHLNLP*ISGPVP Trigger: AGGCACTGGCCCAGAGATTCAAGGTAGATTCAAGTG...CCCACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | ACAAATGTGTGTCTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTGAGGGCATCCACCTTTTaGGAGTTCCACTATTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: TNVCLVPTEVRKGVLDLLRASTF*EFHYFP Trigger: GGGGAAATAGTGGAACTCGCAAAAGGTGGATGCCCT...CAGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCACTAGACACACATTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | GGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTGTGTCTTGGTTGGGCTaGTTCCAGGTGGGATTAAGC | + |
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Preference number: 4 (lower is better) Translates to: GRGCWISWSWSYSYELLCVSWLG*FQVGLS Trigger: GCTTAATCCCACCTGGAACCAGCCCAACCAAGACAC...ACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | TATGAGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCCACAACAATCTAGGTGGTATAGATaGTCCTTCCAAGGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: YELLCGCWGWNPSPLPQQSRWYR*SFQGHP Trigger: TGGATGCCCTTGGAAGGAGCATCTATACCACCTAGA...TTGTTGTGGGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | TGCATGTACAAATGTGTGTCTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTACCTTGAATCTCTaGGCCAGTGCCTCCTCTACT | + |
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Preference number: 4 (lower is better) Translates to: CMYKCVSSAHRGQEGGVGSTLNL*ASASST Trigger: AGTAGAGGAGGCACTGGCCCAGAGATTCAAGGTAGA...TCCAACACCCCCTTCCTGACCTCTGTGGGCACTAGACACACATTTGTACATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | TCCCAGTCCTCTCCCACAACAACCATGTTGACTGCTGAGCTATCTCTCCAGCCAACATCTTGTCATAGATaGTATCCACCACGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SQSSPTTTMLTAELSLQPTSCHR*YPPRCP Trigger: AGGACAGCGTGGTGGATACCATCTATGACAAGATGT...TGGCTGGAGAGATAGCTCAGCAGTCAACATGGTTGTTGTGGGAGAGGACTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | TTATTTTACACGTTTGTGTTGCCTGCATGTACAAATGTGTGTCTAGTGCCCACACCAAGCATGCGGTGCTaGGCTTGGAGAACTGACCGG | + |
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Preference number: 4 (lower is better) Translates to: LFYTFVLPACTNVCLVPTPSMRC*AWRTDR Trigger: CCGGTCAGTTCTCCAAGCCCAGCACCGCATGCTTGG...TGTGGGCACTAGACACACATTTGTACATGCAGGCAACACAAACGTGTAAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CCA 90 bp | TATGAGCTGCTTTGTGGGTGCTGGGGATGGAATCCCAGTCCTCTCCCACAACAAAGCTCAGATTCTAGGTaGTATAGATGCTCCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: YELLCGCWGWNPSPLPQQSSDSR*YRCSFQ Trigger: TTGGAAGGAGCATCTATACCACCTAGAATCTGAGCT...TTGTTGTGGGAGAGGACTGGGATTCCATCCCCAGCACCCACAAAGCAGCTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | GATTTATTATTTTACACGTTTGTGTTGCCTGCATGTACAAATGTGTGTCTAGTGCCCGATTCGGGGCGGTaGCATGAGGTTGTTGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: DLLFYTFVLPACTNVCLVPDSGR*HEVVAR Trigger: CCTCGCAACAACCTCATGGCACCGCCCCGAATCGGG...CACTAGACACACATTTGTACATGCAGGCAACACAAACGTGTAAAATAATAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR GCA 90 bp | GATTTATTATTTTACACGTTTGTGTTGCCTGCATGTACAAATGTGTGTCTAGTGCATCGCAGTGGAAGGTaGCGTTGTGCGTCCCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: DLLFYTFVLPACTNVCLVHRSGR*RCASRF Trigger: GAATCGGGACGCACAACGGCACCTTCCACTGCGATG...CACTAGACACACATTTGTACATGCAGGCAACACAAACGTGTAAAATAATAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| 3UTR CAA 72 bp | CTATTTCTTAAGGATTTATTATTTTACACGTTTGTGTaGCCTGCATGTACAAATGTGTGTCTAGTGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LFLKDLLFYTFV*PACTNVCLVPT Trigger: TGTGGGCACTAGACACACATTTGTACATGCAGGCAACACAAACGTGTAAAATAATAAATCCTTAAGAAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS TCA 90 bp | AGTCCTCTCCATGGCTCGGGCAAGGGTAGCCGGCTTTGGAATGAGTaGGGCTCCTTGGGTACGCACTGGACTCGCCACTGTCCAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SPLHGSGKGSRLWNE*GSLGTHWTRHCPAW Trigger: CCAGGCTGGACAGTGGCGAGTCCAGTGCGTACCCAAGGAGCCTCACTCATTCCAAAGCCGGCTACCCTTGCCCGAGCCATGGAGAGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS GCA 90 bp | CCGGGCACTCAGTGTGGTGGTCATGGCATACCGAGGCTCCCCCTCTaGCCACTGAGAGATCCCATTGTCCACCGCATCCACCTCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: PGTQCGGHGIPRLPL*PLRDPIVHRIHLFH Trigger: GTGGAAGAGGTGGATGCGGTGGACAATGGGATCTCTCAGTGGGCAGAGGGGGAGCCTCGGTATGCCATGACCACCACACTGAGTGCCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS GCA 90 bp | TTCATCGCAGTGGAAGGTGCCGTTGTGCGTCCCGATTCGGGGCGGTaGCATGAGGTTGTTGCGAGGTCTTTTAGCGGGCGGATCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FIAVEGAVVRPDSGR*HEVVARSFSGRILL Trigger: GAGCAGGATCCGCCCGCTAAAAGACCTCGCAACAACCTCATGGCACCGCCCCGAATCGGGACGCACAACGGCACCTTCCACTGCGATGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS CCA 90 bp | ATGGCTCGGGCAAGGGTAGCCGGCTTTGGAATGAGTGAGGCTCCTTaGGTACGCACTGGACTCGCCACTGTCCAGCCTGGTCAGTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: MARARVAGFGMSEAP*VRTGLATVQPGQCR Trigger: TCTACACTGACCAGGCTGGACAGTGGCGAGTCCAGTGCGTACCCAAGGAGCCTCACTCATTCCAAAGCCGGCTACCCTTGCCCGAGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS-3UTR CAA 90 bp | CTAGTGCCCACAGAGGTCAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACCCGCACTGCTCAGCTaGGTCTGCCATGGCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVPTEVRKGVLDLLELELPALLS*VCHGFP Trigger: TGGAAAGCCATGGCAGACCAAGCTGAGCAGTGCGGG...TAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTGACCTCTGTGGGCACTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS TCA 90 bp | CTCAGTGTGGTGGTCATGGCATACCGAGGCTCCCCCTCTGCCCACTaGGAGATCCCATTGTCCACCGCATCCACCTCTTCCACAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSVVVMAYRGSPSAH*EIPLSTASTSSTKF Trigger: GAACTTTGTGGAAGAGGTGGATGCGGTGGACAATGGGATCTCTCAGTGGGCAGAGGGGGAGCCTCGGTATGCCATGACCACCACACTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTAGGGATCCCACTGACTaGGTCCAGGGCCTTATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QEGGVGSPGAGVTVMSCFRDPTD*VQGLIP Trigger: CGGGATAAGGCCCTGGACCAAGTCAGTGGGATCCCT...AAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CAA 90 bp | GGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTCCCTGCCTCAGTGTCTaGGTTGGGCTGGTTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRGCWISWSWSYSYELLCPCLSV*VGLVPG Trigger: ACCTGGAACCAGCCCAACCAAGACACTGAGGCAGGG...ACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CAA 90 bp | GGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTGTGGGTGCTGGTGCCATGAGGTTGTaGCGAGGTCTTTTAGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVGSPGAGVTVMSCFVGAGAMRL*RGLLAG Trigger: GCCCGCTAAAAGACCTCGCAACAACCTCATGGCACC...AGCACCCACAAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS-3UTR CAA 90 bp | GGTCAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCCCACTTGAATCTACCTaGAATCTCTGGGCCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQEGGVGSPGAGVTVMSCPLEST*NLWASA Trigger: GGCACTGGCCCAGAGATTCAAGGTAGATTCAAGTGG...GCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS TCA 90 bp | ATCCACCTTTTGCGAGTTCCACTATTTCCCCACTTGAATCTACCTTaGATCTCTGGGCCAGTGCCTCCTCTACTAAGGCCCGGGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IHLLRVPLFPHLNLP*ISGPVPPLLRPGLA Trigger: TGCCAGCCCGGGCCTTAGTAGAGGAGGCACTGGCCCAGAGATTCAAGGTAGATTCAAGTGGGGAAATAGTGGAACTCGCAAAAGGTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 |
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| CDS-3UTR CAA 90 bp | CAGGAAGGGGGTGTTGGATCTCCTGGAGCTGGAGTTACAGTTATGAGCTGCTTTTTGCAGAAACTCCTCTaGTACCAGGTCCATTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QEGGVGSPGAGVTVMSCFLQKLL*YQVHCS Trigger: CGAGCAATGGACCTGGTACAAGAGGAGTTTCTGCAA...AAAGCAGCTCATAACTGTAACTCCAGCTCCAGGAGATCCAACACCCCCTTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS GCA 90 bp | GTAATGGCCACTTTGGGGGACAGCTCAGATTCTAGGTGGTATAGATaGTCCTTCCAAGGGCATCCACCTTTTGCGAGTTCCACTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VMATLGDSSDSRWYR*SFQGHPPFASSTIS Trigger: GGAAATAGTGGAACTCGCAAAAGGTGGATGCCCTTGGAAGGAGCATCTATACCACCTAGAATCTGAGCTGTCCCCCAAAGTGGCCATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS-3UTR CAA 90 bp | GATTTATTATTTTACACGTTTGTGTTGCCTGCATGTACAAATGTGTGTCTAGTGCAGTGGAAGGTGCCGTaGTGCGTCCCGATTCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DLLFYTFVLPACTNVCLVQWKVP*CVPIRG Trigger: GCCCCGAATCGGGACGCACAACGGCACCTTCCACTG...CACTAGACACACATTTGTACATGCAGGCAACACAAACGTGTAAAATAATAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113682.9 |
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| CDS CCA 72 bp | AGGCGGAGCAACGCGCAAGCCAGAGCTTCATCGCAGTaGAAGGTGCCGTTGTGCGTCCCGATTCGGGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: RRSNAQARASSQ*KVPLCVPIRGG Trigger: ACCGCCCCGAATCGGGACGCACAACGGCACCTTCCACTGCGATGAAGCTCTGGCTTGCGCGTTGCTCCGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS GCA 72 bp | GTGGAAGGTGCCGTTGTGCGTCCCGATTCGGGGCGGTaGCATGAGGTTGTTGCGAGGTCTTTTAGCGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VEGAVVRPDSGR*HEVVARSFSGR Trigger: CCGCCCGCTAAAAGACCTCGCAACAACCTCATGGCACCGCCCCGAATCGGGACGCACAACGGCACCTTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS CAA 72 bp | CCGTTGTGCGTCCCGATTCGGGGCGGTGCCATGAGGTaGTTGCGAGGTCTTTTAGCGGGCGGATCCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLCVPIRGGAMR*LRGLLAGGSCS Trigger: AGAGCAGGATCCGCCCGCTAAAAGACCTCGCAACAACCTCATGGCACCGCCCCGAATCGGGACGCACAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS TCA 72 bp | CATGGCTCGGGCAAGGGTAGCCGGCTTTGGAATGAGTaGGGCTCCTTGGGTACGCACTGGACTCGCCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: HGSGKGSRLWNE*GSLGTHWTRHC Trigger: ACAGTGGCGAGTCCAGTGCGTACCCAAGGAGCCTCACTCATTCCAAAGCCGGCTACCCTTGCCCGAGCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS GCA 72 bp | AGCCAACTTTTCAGGATCCCGAGTCCGCACAATCTCTaGGTTCGCGTACTCGGGCAGGAGGCGGAGCAACGC | + |
|
Preference number: 6 (lower is better) Translates to: SQLFRIPSPHNL*VRVLGQEAEQR Trigger: GCGTTGCTCCGCCTCCTGCCCGAGTACGCGAACGCAGAGATTGTGCGGACTCGGGATCCTGAAAAGTTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS GCA 72 bp | CAGTGTGGTGGTCATGGCATACCGAGGCTCCCCCTCTaGCCACTGAGAGATCCCATTGTCCACCGCATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QCGGHGIPRLPL*PLRDPIVHRIH Trigger: GTGGATGCGGTGGACAATGGGATCTCTCAGTGGGCAGAGGGGGAGCCTCGGTATGCCATGACCACCACACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS CAA 72 bp | TTGTGCGTCCCGATTCGGGGCGGTGCCATGAGGTTGTaGCGAGGTCTTTTAGCGGGCGGATCCTGCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCVPIRGGAMRL*RGLLAGGSCSE Trigger: CTCAGAGCAGGATCCGCCCGCTAAAAGACCTCGCAACAACCTCATGGCACCGCCCCGAATCGGGACGCACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS TCA 72 bp | CACTGGCATGGACGAAGATGCAACCAGGGATCCCACTaGCTTGGTCCAGGGCCTTATCCCGAAGTCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HWHGRRCNQGSH*LGPGPYPEVLS Trigger: GGAGAGGACTTCGGGATAAGGCCCTGGACCAAGTCAGTGGGATCCCTGGTTGCATCTTCGTCCATGCCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS TCA 72 bp | TGTTCAGGGCACCCTCTCGAGTGTGGTGCCCACCAATaGAGCCACTGGCATGGACGAAGATGCAACCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CSGHPLECGAHQ*SHWHGRRCNQG Trigger: TCCCTGGTTGCATCTTCGTCCATGCCAGTGGCTTCATTGGTGGGCACCACACTCGAGAGGGTGCCCTGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 |
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| CDS GCA 72 bp | GCTTACGTCCGAAGTGCAAATAGACAAGTCCCGCACTaGTCAGCTTGGTCTGCCATGGCTTTCCAGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: AYVRSANRQVPH*SAWSAMAFQGT Trigger: TGTGCCCTGGAAAGCCATGGCAGACCAAGCTGAGCAGTGCGGGACTTGTCTATTTGCACTTCGGACGTAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS GCA 72 bp | CTCCTCTTGTACCAGGTCCATTGCTCGCCTGAACCCTaGCTTGTCATAGATGGTATCCACCACGCTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLYQVHCSPEP*LVIDGIHHAVL Trigger: GAGGACAGCGTGGTGGATACCATCTATGACAAGGCAGGGTTCAGGCGAGCAATGGACCTGGTACAAGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001331.13 |
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| CDS CCA 72 bp | TCCACTATTTCCCCACTTGAATCTACCTTGAATCTCTaGGCCAGTGCCTCCTCTACTAAGGCCCGGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: STISPLESTLNL*ASASSTKARAG Trigger: GCCAGCCCGGGCCTTAGTAGAGGAGGCACTGGCCCAGAGATTCAAGGTAGATTCAAGTGGGGAAATAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 |
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| CDS CAA 90 bp | CATCCACCTTTTGCGAGTTCCACTATTTCCCCACTTGAATCTACCTaGAATCTCTGGGCCAGTGCCTCCTCTACTAAGGCCCGGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HPPFASSTISPLEST*NLWASASSTKARAG Trigger: GCCAGCCCGGGCCTTAGTAGAGGAGGCACTGGCCCAGAGATTCAAGGTAGATTCAAGTGGGGAAATAGTGGAACTCGCAAAAGGTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 |
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| CDS TCA 72 bp | GCAGAAACTCCTCTTGTACCAGGTCCATTGCTCGCCTaGACCCTGCCTTGTCATAGATGGTATCCACCACGC | + |
|
Preference number: 6 (lower is better) Translates to: AETPLVPGPLLA*TLPCHRWYPPR Trigger: GCGTGGTGGATACCATCTATGACAAGGCAGGGTTCAGGCGAGCAATGGACCTGGTACAAGAGGAGTTTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001331.13 |
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| CDS TCA 72 bp | TTGCGAGTTCCACTATTTCCCCACTTGAATCTACCTTaGATCTCTGGGCCAGTGCCTCCTCTACTAAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LRVPLFPHLNLP*ISGPVPPLLRP Trigger: GGGCCTTAGTAGAGGAGGCACTGGCCCAGAGATTCAAGGTAGATTCAAGTGGGGAAATAGTGGAACTCGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 |
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| CDS TCA 72 bp | GCATCCACCTTTTGCGAGTTCCACTATTTCCCCACTTaGATCTACCTTGAATCTCTGGGCCAGTGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASTFCEFHYFPT*IYLESLGQCLL Trigger: GAGGAGGCACTGGCCCAGAGATTCAAGGTAGATTCAAGTGGGGAAATAGTGGAACTCGCAAAAGGTGGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 |
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| CDS GCA 72 bp | ACTTTGGGGGACAGCTCAGATTCTAGGTGGTATAGATaGTCCTTCCAAGGGCATCCACCTTTTGCGAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLGDSSDSRWYR*SFQGHPPFASS Trigger: GGAACTCGCAAAAGGTGGATGCCCTTGGAAGGAGCATCTATACCACCTAGAATCTGAGCTGTCCCCCAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 ENSMUST00000171244.2 |
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| CDS TCA 72 bp | GCATCCACCTTTTGCGAGTTCCACTATTTCCCCACTTaGATCTACCTCAGTGTCTTGGTTGGGCTGGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASTFCEFHYFPT*IYLSVLVGLVP Trigger: TGGAACCAGCCCAACCAAGACACTGAGGTAGATTCAAGTGGGGAAATAGTGGAACTCGCAAAAGGTGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171244.2 |
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| CDS CAA 72 bp | TTTGCGAGTTCCACTATTTCCCCACTTGAATCTACCTaGAATCTCTGGGCCAGTGCCTCCTCTACTAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FASSTISPLEST*NLWASASSTKA Trigger: GGCCTTAGTAGAGGAGGCACTGGCCCAGAGATTCAAGGTAGATTCAAGTGGGGAAATAGTGGAACTCGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001331.13 ENSMUST00000113682.9 |
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