Pregenerated sensors for MYEF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027201Ensembl transcript IDs: ENSMUST00000067780.10, ENSMUST00000089825.13, ENSMUST00000110501.8, ENSMUST00000137091.3, ENSMUST00000142718.8, ENSMUST00000147105.8, ENSMUST00000152367.8
Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TCACTGACCACAGCTGGGCCCAGACACCTACTAACATGTACACACTaGTGTCCTCACACTGCTGGGGCTAAAGAATTACAACACAAATTC | + |
Preference number: 1 (lower is better) Translates to: SLTTAGPRHLLTCTH*CPHTAGAKELQHKF Trigger: GAATTTGTGTTGTAATTCTTTAGCCCCAGCAGTGTGAGGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTGGTCAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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3UTR TCA 90 bp | ATACTCTTTCCTCCATGCCTAAATCATGCAACCAGATTGTACCAGTaGAGCTTCACTGACCACAGCTGGGCCCAGACACCTACTAACATG | + |
Preference number: 1 (lower is better) Translates to: ILFPPCLNHATRLYQ*SFTDHSWAQTPTNM Trigger: CATGTTAGTAGGTGTCTGGGCCCAGCTGTGGTCAGTGAAGCTTCACTGGTACAATCTGGTTGCATGATTTAGGCATGGAGGAAAGAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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3UTR CCA 90 bp | ATCGTGGGATCCAATGTGTTTGATATGCTATGCCTAGGTCTTCCCTaGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAA | + |
Preference number: 1 (lower is better) Translates to: IVGSNVFDMLCLGLP*FIKTAFTNASAPIE Trigger: TTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAGACCTAGGCATAGCATATCAAACACATTGGATCCCACGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR GCA 90 bp | GTTCATTTTAATGGCTGGAAACTAGACCGAAAGTTGGGGGTGGTCTaGCTAGTGTTATACTTAGGACTTGCTACTTTATCAGTTCTATAT | + |
Preference number: 1 (lower is better) Translates to: VHFNGWKLDRKLGVV*LVLYLGLATLSVLY Trigger: ATATAGAACTGATAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTCTAGTTTCCAGCCATTAAAATGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR-3UTR CCA 90 bp | TTCACTGACCACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCGGAATAACTACTACCTaGAACCCTCTCCAAACTGGC | + |
Preference number: 2 (lower is better) Translates to: FTDHSWAQTPTNMYTLLSGITTT*NPLQTG Trigger: GCCAGTTTGGAGAGGGTTCCAGGTAGTAGTTATTCC...GGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTGGTCAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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3UTR-3UTR CCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACAAGGTCGGGAAAACTaGAACAGACAAACTCTGCTA | + |
Preference number: 2 (lower is better) Translates to: DRKLGVVCLVLYLGLATLQGREN*NRQTLL Trigger: TAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR CAA 90 bp | CTGTTCTTAGCAGTTCATTTTAATGGCTGGAAACTAGACCGAAAGTaGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTA | + |
Preference number: 2 (lower is better) Translates to: LFLAVHFNGWKLDRK*GVVCLVLYLGLATL Trigger: TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTCTAGTTTCCAGCCATTAAAATGAACTGCTAAGAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR-3UTR TCA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATTCCACTGAAACTGAATaGTCAGATGTGCTGTCTTTA | + |
Preference number: 2 (lower is better) Translates to: ELTPRSGKLEQTNSATENSTETE*SDVLSL Trigger: TAAAGACAGCACATCTGATCATTCAGTTTCAGTGGA...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR-3UTR CCA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGCAAGGTCGGGAAAACTaGAACAGACAAACTCTGCTA | + |
Preference number: 2 (lower is better) Translates to: TTCYSSAGKGDMAISNIVQGREN*NRQTLL Trigger: TAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTG...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR-3UTR TCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATTCCACTGAAACTGAATaGTCAGATGTGCTGTCTTTA | + |
Preference number: 2 (lower is better) Translates to: AGKGDMAISNIVGSNVFDSTETE*SDVLSL Trigger: TAAAGACAGCACATCTGATCATTCAGTTTCAGTGGA...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR-3UTR CCA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGTGTTATGTGGAAAGATaGAATGGTAGAGGGGCAAAA | + |
Preference number: 2 (lower is better) Translates to: TTCYSSAGKGDMAISNIVCYVER*NGRGAK Trigger: TTTTGCCCCTCTACCATTCCATCTTTCCACATAACA...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR-3UTR CCA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCTGTTATGTGGAAAGATaGAATGGTAGAGGGGCAAAA | + |
Preference number: 2 (lower is better) Translates to: VKETWLYLTSWDPMCLICCYVER*NGRGAK Trigger: TTTTGCCCCTCTACCATTCCATCTTTCCACATAACA...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR-3UTR CCA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGTTCATTTTAATGGCTaGAAACTAGACCGAAAGTTG | + |
Preference number: 2 (lower is better) Translates to: TTCYSSAGKGDMAISNIVVHFNG*KLDRKL Trigger: CAACTTTCGGTCTAGTTTCCAGCCATTAAAATGAAC...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR-3UTR TCA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCTCCACTGAAACTGAATaGTCAGATGTGCTGTCTTTA | + |
Preference number: 2 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSSTETE*SDVLSL Trigger: TAAAGACAGCACATCTGATCATTCAGTTTCAGTGGA...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR-3UTR CAA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGAAACTAGACCGAAAGTaGGGGGTGGTCTGCCTAGTG | + |
Preference number: 3 (lower is better) Translates to: LPWFIKTAFTNASAPIEVKLDRK*GVVCLV Trigger: CACTAGGCAGACCACCCCCAACTTTCGGTCTAGTTT...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR GCA 72 bp | AATGGCTGGAAACTAGACCGAAAGTTGGGGGTGGTCTaGCTAGTGTTATACTTAGGACTTGCTACTTTATCA | + |
Preference number: 3 (lower is better) Translates to: NGWKLDRKLGVV*LVLYLGLATLS Trigger: TGATAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTCTAGTTTCCAGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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3UTR CCA 72 bp | AAAGTATCTGTGAGCTTACACCAAGGTCGGGAAAACTaGAACAGACAAACTCTGCTACTGAAAATAACAAAA | + |
Preference number: 3 (lower is better) Translates to: KVSVSLHQGREN*NRQTLLLKITK Trigger: TTTTGTTATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTCACAGATACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | CACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCTCACACTGCCCAGTCCCATGCCCATaGCTCCAGTCACAGTGCTCA | + |
Preference number: 4 (lower is better) Translates to: HSWAQTPTNMYTLLSSHCPVPCP*LQSQCS Trigger: TGAGCACTGTGACTGGAGGCATGGGCATGGGACTGG...GCAGTGTGAGGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR GCA 90 bp | TTCACTGACCACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCCGAAGCTGGAGCTCATaGGGTCCAGTCCCATGCCCA | + |
Preference number: 4 (lower is better) Translates to: FTDHSWAQTPTNMYTLLSRSWSS*GPVPCP Trigger: TGGGCATGGGACTGGACCGCATGAGCTCCAGCTTCG...GGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTGGTCAGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR GCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCACGCCGTTGGCGCTGCTaGGCGGCGGTTTCTCGGGCT | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPRRWRC*AAVSRA Trigger: AGCCCGAGAAACCGCCGCGCAGCAGCGCCAACGGCG...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATCGCCGTTGGCGCTGCTaGGCGGCGGTTTCTCGGGCT | + |
Preference number: 4 (lower is better) Translates to: ELTPRSGKLEQTNSATENRRWRC*AAVSRA Trigger: AGCCCGAGAAACCGCCGCGCAGCAGCGCCAACGGCG...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | CACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCTCACACTGCTATGGCTCCAATGCCTaGCCCCATCCTGTCGAAGCT | + |
Preference number: 4 (lower is better) Translates to: HSWAQTPTNMYTLLSSHCYGSNA*PHPVEA Trigger: AGCTTCGACAGGATGGGGCCAGGCATTGGAGCCATA...GCAGTGTGAGGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR TCA 90 bp | CACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCTCACACTGCGCAGGCCTTTTCCGCTaGCTCTGCAGATTCAAACCT | + |
Preference number: 4 (lower is better) Translates to: HSWAQTPTNMYTLLSSHCAGLFR*LCRFKP Trigger: AGGTTTGAATCTGCAGAGTCAGCGGAAAAGGCCTGC...GCAGTGTGAGGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR GCA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGCGCCGTTGGCGCTGCTaGGCGGCGGTTTCTCGGGCT | + |
Preference number: 4 (lower is better) Translates to: TTCYSSAGKGDMAISNIVRRWRC*AAVSRA Trigger: AGCCCGAGAAACCGCCGCGCAGCAGCGCCAACGGCG...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACGAAGCTGGAGCTCATaGGGTCCAGTCCCATGCCCA | + |
Preference number: 4 (lower is better) Translates to: DRKLGVVCLVLYLGLATLRSWSS*GPVPCP Trigger: TGGGCATGGGACTGGACCGCATGAGCTCCAGCTTCG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | CACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCTCACACTGCAATAGGCTGTCCACCTaGACCAAGTCCCATTCCAAT | + |
Preference number: 4 (lower is better) Translates to: HSWAQTPTNMYTLLSSHCNRLST*TKSHSN Trigger: ATTGGAATGGGACTTGGTCCAGGTGGACAGCCTATT...GCAGTGTGAGGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR GCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTCGCCGTTGGCGCTGCTaGGCGGCGGTTTCTCGGGCT | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFRRWRC*AAVSRA Trigger: AGCCCGAGAAACCGCCGCGCAGCAGCGCCAACGGCG...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | TTCACTGACCACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCACTGCTTCAATTGCCTaGTCAAAAGTGACAGTGCCC | + |
Preference number: 4 (lower is better) Translates to: FTDHSWAQTPTNMYTLLSTASIA*SKVTVP Trigger: GGGCACTGTCACTTTTGAGCAGGCAATTGAAGCAGT...GGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTGGTCAGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR GCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCATGCGGTCCAGTCCCATaGCCATGCCTCCAGTCACAG | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPCGPVP*PCLQSQ Trigger: CTGTGACTGGAGGCATGGGCATGGGACTGGACCGCA...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | CACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCTCACACTGCTATTCCAGTTCCTACTaGACCCATGTTAGAAGCTCC | + |
Preference number: 4 (lower is better) Translates to: HSWAQTPTNMYTLLSSHCYSSSY*THVRSS Trigger: GGAGCTTCTAACATGGGTCCAGTAGGAACTGGAATA...GCAGTGTGAGGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR GCA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAACGCCGTTGGCGCTGCTaGGCGGCGGTTTCTCGGGCT | + |
Preference number: 4 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQRRWRC*AAVSRA Trigger: AGCCCGAGAAACCGCCGCGCAGCAGCGCCAACGGCG...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | TTCACTGACCACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCAGCTCCTATTCTTCCTaGAAACCCTCCAATCATTGC | + |
Preference number: 4 (lower is better) Translates to: FTDHSWAQTPTNMYTLLSSSYSS*KPSNHC Trigger: GCAATGATTGGAGGGTTTGCAGGAAGAATAGGAGCT...GGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTGGTCAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR GCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCACCAGTCCCATGCCCATaGCTCCAGTCACAGTGCTCA | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPPVPCP*LQSQCS Trigger: TGAGCACTGTGACTGGAGGCATGGGCATGGGACTGG...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATCCAGTCCCATGCCCATaGCTCCAGTCACAGTGCTCA | + |
Preference number: 4 (lower is better) Translates to: ELTPRSGKLEQTNSATENPVPCP*LQSQCS Trigger: TGAGCACTGTGACTGGAGGCATGGGCATGGGACTGG...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATTGCGGTCCAGTCCCATaGCCATGCCTCCAGTCACAG | + |
Preference number: 4 (lower is better) Translates to: AGKGDMAISNIVGSNVFDCGPVP*PCLQSQ Trigger: CTGTGACTGGAGGCATGGGCATGGGACTGGACCGCA...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTATGCTCCTTTCCAGTATaGCTCCAATGCCTGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: DRKLGVVCLVLYLGLATLCSFPV*LQCLAP Trigger: TGGGGCCAGGCATTGGAGCCATACTGGAAAGGAGCA...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | CACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCTCACACTGCATATCTGGTTGCCTTTaGAGCCTAATCTGTCTCTCA | + |
Preference number: 4 (lower is better) Translates to: HSWAQTPTNMYTLLSSHCISGCL*SLICLS Trigger: TGAGAGACAGATTAGGCTCCAAAGGCAACCAGATAT...GCAGTGTGAGGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR TCA 90 bp | CTAACATGTACACACTGCTGTCCTCACACTGCTGGGGCTAAAGAATTACAACACCACGCCACAACCCCTTaGTTTTCCTTCCGCATCCTT | + |
Preference number: 4 (lower is better) Translates to: LTCTHCCPHTAGAKELQHHATTP*FSFRIL Trigger: AAGGATGCGGAAGGAAAATCAAGGGGTTGTGGCGTG...GTGTTGTAATTCTTTAGCCCCAGCAGTGTGAGGACAGCAGTGTGTACATGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR TCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACACGCCACAACCCCTTaGTTTTCCTTCCGCATCCTT | + |
Preference number: 4 (lower is better) Translates to: DRKLGVVCLVLYLGLATLHATTP*FSFRIL Trigger: AAGGATGCGGAAGGAAAATCAAGGGGTTGTGGCGTG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR TCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCATTGCCTGCTCAAAAGTaGCAGTGCCCATGCCTCTGC | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPLPAQK*QCPCLC Trigger: GCAGAGGCATGGGCACTGTCACTTTTGAGCAGGCAA...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR TCA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATTTGCCTGCTCAAAAGTaGCAGTGCCCATGCCTCTGC | + |
Preference number: 4 (lower is better) Translates to: ELTPRSGKLEQTNSATENLPAQK*QCPCLC Trigger: GCAGAGGCATGGGCACTGTCACTTTTGAGCAGGCAA...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR TCA 90 bp | TTCACTGACCACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCTGTCTTACTATCATGTaGACGGTAGTCTTCATGAGG | + |
Preference number: 4 (lower is better) Translates to: FTDHSWAQTPTNMYTLLSCLTIM*TVVFMR Trigger: CCTCATGAAGACTACCGTTCACATGATAGTAAGACA...GGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTGGTCAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR GCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATTCCTGTTCGCTGCAGTaGCCGGCGAGCATTTTCTCC | + |
Preference number: 4 (lower is better) Translates to: AGKGDMAISNIVGSNVFDSCSLQ*PASIFS Trigger: GGAGAAAATGCTCGCCGGGCACTGCAGCGAACAGGA...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACAGTGCCCATGCCTCTaGTCTTGCCATCCTTGTCTT | + |
Preference number: 4 (lower is better) Translates to: DRKLGVVCLVLYLGLATLQCPCL*SCHPCL Trigger: AAGACAAGGATGGCAAGAGCAGAGGCATGGGCACTG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGCGAAGCTGGAGCTCATaGGGTCCAGTCCCATGCCCA | + |
Preference number: 4 (lower is better) Translates to: TTCYSSAGKGDMAISNIVRSWSS*GPVPCP Trigger: TGGGCATGGGACTGGACCGCATGAGCTCCAGCTTCG...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CCA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATTATGGCTCCAATGCCTaGCCCCATCCTGTCGAAGCT | + |
Preference number: 4 (lower is better) Translates to: ELTPRSGKLEQTNSATENYGSNA*PHPVEA Trigger: AGCTTCGACAGGATGGGGCCAGGCATTGGAGCCATA...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR TCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCACACGCCACAACCCCTTaGTTTTCCTTCCGCATCCTT | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPHATTP*FSFRIL Trigger: AAGGATGCGGAAGGAAAATCAAGGGGTTGTGGCGTG...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR TCA 90 bp | CTAACATGTACACACTGCTGTCCTCACACTGCTGGGGCTAAAGAATTACAACACCTGCAGATTCAAACCTaGCTGTCCCACAGCCTTTTG | + |
Preference number: 4 (lower is better) Translates to: LTCTHCCPHTAGAKELQHLQIQT*LSHSLL Trigger: CAAAAGGCTGTGGGACAGTCAGGTTTGAATCTGCAG...GTGTTGTAATTCTTTAGCCCCAGCAGTGTGAGGACAGCAGTGTGTACATGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
||
CDS-3UTR TCA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATGCAGGCCTTTTCCGCTaGCTCTGCAGATTCAAACCT | + |
Preference number: 4 (lower is better) Translates to: ELTPRSGKLEQTNSATENAGLFR*LCRFKP Trigger: AGGTTTGAATCTGCAGAGTCAGCGGAAAAGGCCTGC...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGTCCTGTTCGCTGCAGTaGCCGGCGAGCATTTTCTCC | + |
Preference number: 4 (lower is better) Translates to: LPWFIKTAFTNASAPIEVSCSLQ*PASIFS Trigger: GGAGAAAATGCTCGCCGGGCACTGCAGCGAACAGGA...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | CTAACATGTACACACTGCTGTCCTCACACTGCTGGGGCTAAAGAATTACAACACCAAGTCCCATTCCAATaGCTCCAAGACCACGTGGTA | + |
Preference number: 4 (lower is better) Translates to: LTCTHCCPHTAGAKELQHQVPFQ*LQDHVV Trigger: TACCACGTGGTCTTGGAGGCATTGGAATGGGACTTG...GTGTTGTAATTCTTTAGCCCCAGCAGTGTGAGGACAGCAGTGTGTACATGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
||
CDS-3UTR GCA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGCCAGTCCCATGCCCATaGCTCCAGTCACAGTGCTCA | + |
Preference number: 4 (lower is better) Translates to: LPWFIKTAFTNASAPIEVPVPCP*LQSQCS Trigger: TGAGCACTGTGACTGGAGGCATGGGCATGGGACTGG...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACTCGGTCTACATCGATaGTCCTTTCCAGTATGGCTC | + |
Preference number: 4 (lower is better) Translates to: DRKLGVVCLVLYLGLATLLGLHR*SFPVWL Trigger: GAGCCATACTGGAAAGGAGCATCGATGTAGACCGAG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR TCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATGCAGGCCTTTTCCGCTaGCTCTGCAGATTCAAACCT | + |
Preference number: 4 (lower is better) Translates to: AGKGDMAISNIVGSNVFDAGLFR*LCRFKP Trigger: AGGTTTGAATCTGCAGAGTCAGCGGAAAAGGCCTGC...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATCAGTGCCCATGCCTCTaGTCTTGCCATCCTTGTCTT | + |
Preference number: 4 (lower is better) Translates to: AGKGDMAISNIVGSNVFDQCPCL*SCHPCL Trigger: AAGACAAGGATGGCAAGAGCAGAGGCATGGGCACTG...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTAACTGCTTCAATTGCCTaGTCAAAAGTGACAGTGCCC | + |
Preference number: 4 (lower is better) Translates to: DRKLGVVCLVLYLGLATLTASIA*SKVTVP Trigger: GGGCACTGTCACTTTTGAGCAGGCAATTGAAGCAGT...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCACTCGGTCTACATCGATaGTCCTTTCCAGTATGGCTC | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPLGLHR*SFPVWL Trigger: GAGCCATACTGGAAAGGAGCATCGATGTAGACCGAG...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CCA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGTATGGCTCCAATGCCTaGCCCCATCCTGTCGAAGCT | + |
Preference number: 4 (lower is better) Translates to: LPWFIKTAFTNASAPIEVYGSNA*PHPVEA Trigger: AGCTTCGACAGGATGGGGCCAGGCATTGGAGCCATA...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CCA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCTGCTCCTTTCCAGTATaGCTCCAATGCCTGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: VKETWLYLTSWDPMCLICCSFPV*LQCLAP Trigger: TGGGGCCAGGCATTGGAGCCATACTGGAAAGGAGCA...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR TCA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCCACGCCACAACCCCTTaGTTTTCCTTCCGCATCCTT | + |
Preference number: 4 (lower is better) Translates to: VKETWLYLTSWDPMCLICHATTP*FSFRIL Trigger: AAGGATGCGGAAGGAAAATCAAGGGGTTGTGGCGTG...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGTCCTGTTCGCTGCAGTaGCCGGCGAGCATTTTCTCC | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLSCSLQ*PASIFS Trigger: GGAGAAAATGCTCGCCGGGCACTGCAGCGAACAGGA...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
||
CDS-3UTR GCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACCAAGTCTACCAGCCTaGAAATTGCTGATAACCTCA | + |
Preference number: 4 (lower is better) Translates to: DRKLGVVCLVLYLGLATLPSLPA*KLLITS Trigger: TGAGGTTATCAGCAATTTGCAGGCTGGTAGACTTGG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAACTGCTTCAATTGCCTaGTCAAAAGTGACAGTGCCC | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPTASIA*SKVTVP Trigger: GGGCACTGTCACTTTTGAGCAGGCAATTGAAGCAGT...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATACTGCTTCAATTGCCTaGTCAAAAGTGACAGTGCCC | + |
Preference number: 4 (lower is better) Translates to: ELTPRSGKLEQTNSATENTASIA*SKVTVP Trigger: GGGCACTGTCACTTTTGAGCAGGCAATTGAAGCAGT...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATCAAGTCCCATTCCAATaGCTCCAAGACCACGTGGTA | + |
Preference number: 4 (lower is better) Translates to: AGKGDMAISNIVGSNVFDQVPFQ*LQDHVV Trigger: TACCACGTGGTCTTGGAGGCATTGGAATGGGACTTG...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGCCAGTCCCATGCCCATaGCTCCAGTCACAGTGCTCA | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLPVPCP*LQSQCS Trigger: TGAGCACTGTGACTGGAGGCATGGGCATGGGACTGG...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATGCGGTCCAGTCCCATaGCCATGCCTCCAGTCACAG | + |
Preference number: 4 (lower is better) Translates to: GSLHICRIQFFPIRTYLTCGPVP*PCLQSQ Trigger: CTGTGACTGGAGGCATGGGCATGGGACTGGACCGCA...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCTGCGGTCCAGTCCCATaGCCATGCCTCCAGTCACAG | + |
Preference number: 4 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSCGPVP*PCLQSQ Trigger: CTGTGACTGGAGGCATGGGCATGGGACTGGACCGCA...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAATGCGGTCCAGTCCCATaGCCATGCCTCCAGTCACAG | + |
Preference number: 4 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQCGPVP*PCLQSQ Trigger: CTGTGACTGGAGGCATGGGCATGGGACTGGACCGCA...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAACGAAGCTGGAGCTCATaGGGTCCAGTCCCATGCCCA | + |
Preference number: 4 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQRSWSS*GPVPCP Trigger: TGGGCATGGGACTGGACCGCATGAGCTCCAGCTTCG...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAAATAGGCTGTCCACCTaGACCAAGTCCCATTCCAAT | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPNRLST*TKSHSN Trigger: ATTGGAATGGGACTTGGTCCAGGTGGACAGCCTATT...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATAATAGGCTGTCCACCTaGACCAAGTCCCATTCCAAT | + |
Preference number: 4 (lower is better) Translates to: ELTPRSGKLEQTNSATENNRLST*TKSHSN Trigger: ATTGGAATGGGACTTGGTCCAGGTGGACAGCCTATT...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATTCATTCCGCTTCCCATaGGACCTGATAAAAACCCTC | + |
Preference number: 4 (lower is better) Translates to: ELTPRSGKLEQTNSATENSFRFP*DLIKTL Trigger: GAGGGTTTTTATCAGGTCCCATGGGAAGCGGAATGA...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR TCA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGCTGCAGATTCAAACCTaGCTGTCCCACAGCCTTTTG | + |
Preference number: 4 (lower is better) Translates to: TTCYSSAGKGDMAISNIVLQIQT*LSHSLL Trigger: CAAAAGGCTGTGGGACAGTCAGGTTTGAATCTGCAG...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR TCA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCCTGCAGATTCAAACCTaGCTGTCCCACAGCCTTTTG | + |
Preference number: 4 (lower is better) Translates to: VKETWLYLTSWDPMCLICLQIQT*LSHSLL Trigger: CAAAAGGCTGTGGGACAGTCAGGTTTGAATCTGCAG...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCCTGTTCGCTGCAGTaGCCGGCGAGCATTTTCTCC | + |
Preference number: 4 (lower is better) Translates to: GSLHICRIQFFPIRTYLTSCSLQ*PASIFS Trigger: GGAGAAAATGCTCGCCGGGCACTGCAGCGAACAGGA...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATCCAAGTCTACCAGCCTaGAAATTGCTGATAACCTCA | + |
Preference number: 4 (lower is better) Translates to: ELTPRSGKLEQTNSATENPSLPA*KLLITS Trigger: TGAGGTTATCAGCAATTTGCAGGCTGGTAGACTTGG...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCACCAAGTCTACCAGCCTaGAAATTGCTGATAACCTCA | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPPSLPA*KLLITS Trigger: TGAGGTTATCAGCAATTTGCAGGCTGGTAGACTTGG...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTATTGGACTGCTTCAATTaGCTGCTCAAAAGTGACAGT | + |
Preference number: 4 (lower is better) Translates to: DRKLGVVCLVLYLGLATLLDCFN*LLKSDS Trigger: ACTGTCACTTTTGAGCAGGCAATTGAAGCAGTCCAA...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | CTAACATGTACACACTGCTGTCCTCACACTGCTGGGGCTAAAGAATTACAACACTTGGACTGCTTCAATTaGCTGCTCAAAAGTGACAGT | + |
Preference number: 4 (lower is better) Translates to: LTCTHCCPHTAGAKELQHLDCFN*LLKSDS Trigger: ACTGTCACTTTTGAGCAGGCAATTGAAGCAGTCCAA...GTGTTGTAATTCTTTAGCCCCAGCAGTGTGAGGACAGCAGTGTGTACATGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
||
CDS-3UTR GCA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGCAAGTCCCATTCCAATaGCTCCAAGACCACGTGGTA | + |
Preference number: 4 (lower is better) Translates to: LPWFIKTAFTNASAPIEVQVPFQ*LQDHVV Trigger: TACCACGTGGTCTTGGAGGCATTGGAATGGGACTTG...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATAACTCCACCAAAGCCTaGCATGCTATTCATTGCTTC | + |
Preference number: 4 (lower is better) Translates to: ELTPRSGKLEQTNSATENNSTKA*HAIHCF Trigger: GAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTT...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGCTCGGTCTACATCGATaGTCCTTTCCAGTATGGCTC | + |
Preference number: 4 (lower is better) Translates to: TTCYSSAGKGDMAISNIVLGLHR*SFPVWL Trigger: GAGCCATACTGGAAAGGAGCATCGATGTAGACCGAG...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
3UTR CAA 72 bp | GCAGTTCATTTTAATGGCTGGAAACTAGACCGAAAGTaGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTT | + |
Preference number: 4 (lower is better) Translates to: AVHFNGWKLDRK*GVVCLVLYLGL Trigger: AAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTCTAGTTTCCAGCCATTAAAATGAACTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR TCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTCACGCCACAACCCCTTaGTTTTCCTTCCGCATCCTT | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFHATTP*FSFRIL Trigger: AAGGATGCGGAAGGAAAATCAAGGGGTTGTGGCGTG...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
||
CDS-3UTR TCA 90 bp | CTAACATGTACACACTGCTGTCCTCACACTGCTGGGGCTAAAGAATTACAACACCAAATTCTTCATCTTTaGATTCAACCACGCCACAAC | + |
Preference number: 4 (lower is better) Translates to: LTCTHCCPHTAGAKELQHQILHL*IQPRHN Trigger: GTTGTGGCGTGGTTGAATTCAAAGATGAAGAATTTG...GTGTTGTAATTCTTTAGCCCCAGCAGTGTGAGGACAGCAGTGTGTACATGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
||
CDS-3UTR TCA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAATTGCCTGCTCAAAAGTaGCAGTGCCCATGCCTCTGC | + |
Preference number: 4 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQLPAQK*QCPCLC Trigger: GCAGAGGCATGGGCACTGTCACTTTTGAGCAGGCAA...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
||
CDS-3UTR TCA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCTTGCCTGCTCAAAAGTaGCAGTGCCCATGCCTCTGC | + |
Preference number: 4 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSLPAQK*QCPCLC Trigger: GCAGAGGCATGGGCACTGTCACTTTTGAGCAGGCAA...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR TCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTGCAGGCCTTTTCCGCTaGCTCTGCAGATTCAAACCT | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFAGLFR*LCRFKP Trigger: AGGTTTGAATCTGCAGAGTCAGCGGAAAAGGCCTGC...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
||
CDS-3UTR GCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCATTGGACTGCTTCAATTaGCTGCTCAAAAGTGACAGT | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPLDCFN*LLKSDS Trigger: ACTGTCACTTTTGAGCAGGCAATTGAAGCAGTCCAA...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCCACCAAAGCCTGCCATaGTATTCATTGCTTCCAGAC | + |
Preference number: 4 (lower is better) Translates to: VKETWLYLTSWDPMCLICHQSLP*YSLLPD Trigger: GTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTG...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGCACCAAAGCCTGCCATaGTATTCATTGCTTCCAGAC | + |
Preference number: 4 (lower is better) Translates to: LPWFIKTAFTNASAPIEVHQSLP*YSLLPD Trigger: GTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTG...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATAACTCCACCAAAGCCTaGCATGCTATTCATTGCTTC | + |
Preference number: 4 (lower is better) Translates to: AGKGDMAISNIVGSNVFDNSTKA*HAIHCF Trigger: GAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTT...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACTCAGGAGGAATGTTTaGATTATTGAGAATGGAAGG | + |
Preference number: 4 (lower is better) Translates to: DRKLGVVCLVLYLGLATLLRRNV*IIENGR Trigger: CCTTCCATTCTCAATAATCCAAACATTCCTCCTGAG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CCA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCCCAGTTATGTTCAGCTaGCTGGCACTAATAGGCTGT | + |
Preference number: 4 (lower is better) Translates to: VKETWLYLTSWDPMCLICPVMFS*LALIGC Trigger: ACAGCCTATTAGTGCCAGCCAGCTGAACATAACTGG...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CCA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCTATGGCTCCAATGCCTaGCCCCATCCTGTCGAAGCT | + |
Preference number: 4 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSYGSNA*PHPVEA Trigger: AGCTTCGACAGGATGGGGCCAGGCATTGGAGCCATA...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CCA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATATGGCTCCAATGCCTaGCCCCATCCTGTCGAAGCT | + |
Preference number: 4 (lower is better) Translates to: GSLHICRIQFFPIRTYLTYGSNA*PHPVEA Trigger: AGCTTCGACAGGATGGGGCCAGGCATTGGAGCCATA...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
||
CDS-3UTR CCA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATGCTCCTTTCCAGTATaGCTCCAATGCCTGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: GSLHICRIQFFPIRTYLTCSFPV*LQCLAP Trigger: TGGGGCCAGGCATTGGAGCCATACTGGAAAGGAGCA...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CCA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAATGCTCCTTTCCAGTATaGCTCCAATGCCTGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQCSFPV*LQCLAP Trigger: TGGGGCCAGGCATTGGAGCCATACTGGAAAGGAGCA...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
||
CDS-3UTR CCA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCTCATTCCGCTTCCCATaGGACCTGATAAAAACCCTC | + |
Preference number: 4 (lower is better) Translates to: VKETWLYLTSWDPMCLICSFRFP*DLIKTL Trigger: GAGGGTTTTTATCAGGTCCCATGGGAAGCGGAATGA...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGTCATTCCGCTTCCCATaGGACCTGATAAAAACCCTC | + |
Preference number: 4 (lower is better) Translates to: LPWFIKTAFTNASAPIEVSFRFP*DLIKTL Trigger: GAGGGTTTTTATCAGGTCCCATGGGAAGCGGAATGA...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATATCTGGTTGCCTTTaGAGCCTAATCTGTCTCTCA | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPISGCL*SLICLS Trigger: TGAGAGACAGATTAGGCTCCAAAGGCAACCAGATAT...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR TCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATTGTCTTACTATCATGTaGACGGTAGTCTTCATGAGG | + |
Preference number: 4 (lower is better) Translates to: AGKGDMAISNIVGSNVFDCLTIM*TVVFMR Trigger: CCTCATGAAGACTACCGTTCACATGATAGTAAGACA...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACACAGTGCCCATGCCTCTaGTCTTGCCATCCTTGTCTT | + |
Preference number: 4 (lower is better) Translates to: GSLHICRIQFFPIRTYLTQCPCL*SCHPCL Trigger: AAGACAAGGATGGCAAGAGCAGAGGCATGGGCACTG...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAACAGTGCCCATGCCTCTaGTCTTGCCATCCTTGTCTT | + |
Preference number: 4 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQQCPCL*SCHPCL Trigger: AAGACAAGGATGGCAAGAGCAGAGGCATGGGCACTG...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATTTGGACTGCTTCAATTaGCTGCTCAAAAGTGACAGT | + |
Preference number: 4 (lower is better) Translates to: AGKGDMAISNIVGSNVFDLDCFN*LLKSDS Trigger: ACTGTCACTTTTGAGCAGGCAATTGAAGCAGTCCAA...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTAATTGAACATGGAAATTaGTTGGACTGCTTCAATTGC | + |
Preference number: 4 (lower is better) Translates to: DRKLGVVCLVLYLGLATLIEHGN*LDCFNC Trigger: GCAATTGAAGCAGTCCAAGCAATTTCCATGTTCAAT...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTCAAGTCCCATTCCAATaGCTCCAAGACCACGTGGTA | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFQVPFQ*LQDHVV Trigger: TACCACGTGGTCTTGGAGGCATTGGAATGGGACTTG...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATCTCCAATCATTGCACTaGCAAGTCTACCAAAGGAAT | + |
Preference number: 4 (lower is better) Translates to: AGKGDMAISNIVGSNVFDLQSLH*QVYQRN Trigger: ATTCCTTTGGTAGACTTGGCAGTGCAATGATTGGAG...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067780.10 |
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CDS-3UTR GCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATAAACCCTCCAATCATTaGACTGCCAAGTCTACCAAA | + |
Preference number: 4 (lower is better) Translates to: AGKGDMAISNIVGSNVFDKPSNH*TAKSTK Trigger: TTTGGTAGACTTGGCAGTGCAATGATTGGAGGGTTT...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067780.10 |
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CDS-3UTR GCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGCTCGGTCTACATCGATaGTCCTTTCCAGTATGGCTC | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLLGLHR*SFPVWL Trigger: GAGCCATACTGGAAAGGAGCATCGATGTAGACCGAG...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTCTCGGTCTACATCGATaGTCCTTTCCAGTATGGCTC | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFLGLHR*SFPVWL Trigger: GAGCCATACTGGAAAGGAGCATCGATGTAGACCGAG...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACTCCATCTTTATCTCTaGAAACATTACATGACCACA | + |
Preference number: 4 (lower is better) Translates to: DRKLGVVCLVLYLGLATLLHLYL*KHYMTT Trigger: TGTGGTCATGTAATGTTTGCAGAGATAAAGATGGAG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCACTCAGGAGGAATGTTTaGATTATTGAGAATGGAAGG | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPLRRNV*IIENGR Trigger: CCTTCCATTCTCAATAATCCAAACATTCCTCCTGAG...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGTATTCCAGTTCCTACTaGACCCATGTTAGAAGCTCC | + |
Preference number: 4 (lower is better) Translates to: LPWFIKTAFTNASAPIEVYSSSY*THVRSS Trigger: GGAGCTTCTAACATGGGTCCAGTAGGAACTGGAATA...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067780.10 |
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CDS-3UTR CCA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATATCTGGTTGCCTTTaGAGCCTAATCTGTCTCTCA | + |
Preference number: 4 (lower is better) Translates to: AGKGDMAISNIVGSNVFDISGCL*SLICLS Trigger: TGAGAGACAGATTAGGCTCCAAAGGCAACCAGATAT...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR TCA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGTGTCTTACTATCATGTaGACGGTAGTCTTCATGAGG | + |
Preference number: 4 (lower is better) Translates to: TTCYSSAGKGDMAISNIVCLTIM*TVVFMR Trigger: CCTCATGAAGACTACCGTTCACATGATAGTAAGACA...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR TCA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACACTGCAGATTCAAACCTaGCTGTCCCACAGCCTTTTG | + |
Preference number: 4 (lower is better) Translates to: GSLHICRIQFFPIRTYLTLQIQT*LSHSLL Trigger: CAAAAGGCTGTGGGACAGTCAGGTTTGAATCTGCAG...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTACTGCTTCAATTGCCTaGTCAAAAGTGACAGTGCCC | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFTASIA*SKVTVP Trigger: GGGCACTGTCACTTTTGAGCAGGCAATTGAAGCAGT...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGCACCAAAGCCTGCCATaGTATTCATTGCTTCCAGAC | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLHQSLP*YSLLPD Trigger: GTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTG...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTCACCAAAGCCTGCCATaGTATTCATTGCTTCCAGAC | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFHQSLP*YSLLPD Trigger: GTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTG...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCACTCCATCTTTATCTCTaGAAACATTACATGACCACA | + |
Preference number: 4 (lower is better) Translates to: AILLQVKETWLYLTSWDPLHLYL*KHYMTT Trigger: TGTGGTCATGTAATGTTTGCAGAGATAAAGATGGAG...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTAATAGGCTGTCCACCTaGACCAAGTCCCATTCCAAT | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFNRLST*TKSHSN Trigger: ATTGGAATGGGACTTGGTCCAGGTGGACAGCCTATT...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGCCAGTTATGTTCAGCTaGCTGGCACTAATAGGCTGT | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLPVMFS*LALIGC Trigger: ACAGCCTATTAGTGCCAGCCAGCTGAACATAACTGG...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTCCAGTTATGTTCAGCTaGCTGGCACTAATAGGCTGT | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFPVMFS*LALIGC Trigger: ACAGCCTATTAGTGCCAGCCAGCTGAACATAACTGG...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CCA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGCATTCCCATACCACTTaGACCCAAATTTCCCATTAC | + |
Preference number: 4 (lower is better) Translates to: TTCYSSAGKGDMAISNIVHSHTT*TQISHY Trigger: GTAATGGGAAATTTGGGTCCAAGTGGTATGGGAATG...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142718.8 |
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CDS-3UTR TCA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCCAAATTCTTCATCTTTaGATTCAACCACGCCACAAC | + |
Preference number: 4 (lower is better) Translates to: VKETWLYLTSWDPMCLICQILHL*IQPRHN Trigger: GTTGTGGCGTGGTTGAATTCAAAGATGAAGAATTTG...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR GCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGCCAAGTCTACCAGCCTaGAAATTGCTGATAACCTCA | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLPSLPA*KLLITS Trigger: TGAGGTTATCAGCAATTTGCAGGCTGGTAGACTTGG...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
||
CDS-3UTR GCA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCCACCAAAGCCTGCCATaGTATTCATTGCTTCCAGAC | + |
Preference number: 4 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSHQSLP*YSLLPD Trigger: GTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTG...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTAACTCCACCAAAGCCTaGCATGCTATTCATTGCTTC | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFNSTKA*HAIHCF Trigger: GAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTT...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTAGCTCCTATTCTTCCTaGAAACCCTCCAATCATTGC | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFSSYSS*KPSNHC Trigger: GCAATGATTGGAGGGTTTGCAGGAAGAATAGGAGCT...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CCA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCCTCAGGAGGAATGTTTaGATTATTGAGAATGGAAGG | + |
Preference number: 4 (lower is better) Translates to: VKETWLYLTSWDPMCLICLRRNV*IIENGR Trigger: CCTTCCATTCTCAATAATCCAAACATTCCTCCTGAG...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CCA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCCCAGTTATGTTCAGCTaGCTGGCACTAATAGGCTGT | + |
Preference number: 4 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSPVMFS*LALIGC Trigger: ACAGCCTATTAGTGCCAGCCAGCTGAACATAACTGG...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTATTCCAGTTCCTACTaGACCCATGTTAGAAGCTCC | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFYSSSY*THVRSS Trigger: GGAGCTTCTAACATGGGTCCAGTAGGAACTGGAATA...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CCA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAATCATTCCGCTTCCCATaGGACCTGATAAAAACCCTC | + |
Preference number: 4 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQSFRFP*DLIKTL Trigger: GAGGGTTTTTATCAGGTCCCATGGGAAGCGGAATGA...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
||
CDS-3UTR CCA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCATTCCGCTTCCCATaGGACCTGATAAAAACCCTC | + |
Preference number: 4 (lower is better) Translates to: GSLHICRIQFFPIRTYLTSFRFP*DLIKTL Trigger: GAGGGTTTTTATCAGGTCCCATGGGAAGCGGAATGA...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
||
CDS-3UTR TCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGTGTCTTACTATCATGTaGACGGTAGTCTTCATGAGG | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLCLTIM*TVVFMR Trigger: CCTCATGAAGACTACCGTTCACATGATAGTAAGACA...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACACCAAGTCTACCAGCCTaGAAATTGCTGATAACCTCA | + |
Preference number: 4 (lower is better) Translates to: GSLHICRIQFFPIRTYLTPSLPA*KLLITS Trigger: TGAGGTTATCAGCAATTTGCAGGCTGGTAGACTTGG...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTTGGACTGCTTCAATTaGCTGCTCAAAAGTGACAGT | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFLDCFN*LLKSDS Trigger: ACTGTCACTTTTGAGCAGGCAATTGAAGCAGTCCAA...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGATTGAACATGGAAATTaGTTGGACTGCTTCAATTGC | + |
Preference number: 4 (lower is better) Translates to: TTCYSSAGKGDMAISNIVIEHGN*LDCFNC Trigger: GCAATTGAAGCAGTCCAAGCAATTTCCATGTTCAAT...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGATTGAACATGGAAATTaGTTGGACTGCTTCAATTGC | + |
Preference number: 4 (lower is better) Translates to: LPWFIKTAFTNASAPIEVIEHGN*LDCFNC Trigger: GCAATTGAAGCAGTCCAAGCAATTTCCATGTTCAAT...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCAACTCCACCAAAGCCTaGCATGCTATTCATTGCTTC | + |
Preference number: 4 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSNSTKA*HAIHCF Trigger: GAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTT...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTCTCCAATCATTGCACTaGCAAGTCTACCAAAGGAAT | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFLQSLH*QVYQRN Trigger: ATTCCTTTGGTAGACTTGGCAGTGCAATGATTGGAG...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGCTCCAATCATTGCACTaGCAAGTCTACCAAAGGAAT | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLLQSLH*QVYQRN Trigger: ATTCCTTTGGTAGACTTGGCAGTGCAATGATTGGAG...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCAGCTCCTATTCTTCCTaGAAACCCTCCAATCATTGC | + |
Preference number: 4 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSSSYSS*KPSNHC Trigger: GCAATGATTGGAGGGTTTGCAGGAAGAATAGGAGCT...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067780.10 |
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CDS-3UTR CCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGATATCTGGTTGCCTTTaGAGCCTAATCTGTCTCTCA | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLISGCL*SLICLS Trigger: TGAGAGACAGATTAGGCTCCAAAGGCAACCAGATAT...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR TCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGCAAATTCTTCATCTTTaGATTCAACCACGCCACAAC | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLQILHL*IQPRHN Trigger: GTTGTGGCGTGGTTGAATTCAAAGATGAAGAATTTG...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAAAAACCCTCCAATCATTaGACTGCCAAGTCTACCAAA | + |
Preference number: 4 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQKPSNH*TAKSTK Trigger: TTTGGTAGACTTGGCAGTGCAATGATTGGAGGGTTT...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACAAAACCCTCCAATCATTaGACTGCCAAGTCTACCAAA | + |
Preference number: 4 (lower is better) Translates to: GSLHICRIQFFPIRTYLTKPSNH*TAKSTK Trigger: TTTGGTAGACTTGGCAGTGCAATGATTGGAGGGTTT...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGCTCAGGAGGAATGTTTaGATTATTGAGAATGGAAGG | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLLRRNV*IIENGR Trigger: CCTTCCATTCTCAATAATCCAAACATTCCTCCTGAG...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTCTCAGGAGGAATGTTTaGATTATTGAGAATGGAAGG | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFLRRNV*IIENGR Trigger: CCTTCCATTCTCAATAATCCAAACATTCCTCCTGAG...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CCA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCATATCTGGTTGCCTTTaGAGCCTAATCTGTCTCTCA | + |
Preference number: 4 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSISGCL*SLICLS Trigger: TGAGAGACAGATTAGGCTCCAAAGGCAACCAGATAT...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CCA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAACATTCCCATACCACTTaGACCCAAATTTCCCATTAC | + |
Preference number: 4 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQHSHTT*TQISHY Trigger: GTAATGGGAAATTTGGGTCCAAGTGGTATGGGAATG...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152367.8 |
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CDS-3UTR TCA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCCAAATTCTTCATCTTTaGATTCAACCACGCCACAAC | + |
Preference number: 4 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSQILHL*IQPRHN Trigger: GTTGTGGCGTGGTTGAATTCAAAGATGAAGAATTTG...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGATTGAACATGGAAATTaGTTGGACTGCTTCAATTGC | + |
Preference number: 4 (lower is better) Translates to: PGSLHICRIQFFPIRTYLIEHGN*LDCFNC Trigger: GCAATTGAAGCAGTCCAAGCAATTTCCATGTTCAAT...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTCTCCATCTTTATCTCTaGAAACATTACATGACCACA | + |
Preference number: 4 (lower is better) Translates to: HEEDKNVQVACIFAVSNFLHLYL*KHYMTT Trigger: TGTGGTCATGTAATGTTTGCAGAGATAAAGATGGAG...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAAATTGAACATGGAAATTaGTTGGACTGCTTCAATTGC | + |
Preference number: 4 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQIEHGN*LDCFNC Trigger: GCAATTGAAGCAGTCCAAGCAATTTCCATGTTCAAT...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR GCA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCCTCCATCTTTATCTCTaGAAACATTACATGACCACA | + |
Preference number: 4 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSLHLYL*KHYMTT Trigger: TGTGGTCATGTAATGTTTGCAGAGATAAAGATGGAG...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR GCA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACACTCCATCTTTATCTCTaGAAACATTACATGACCACA | + |
Preference number: 4 (lower is better) Translates to: GSLHICRIQFFPIRTYLTLHLYL*KHYMTT Trigger: TGTGGTCATGTAATGTTTGCAGAGATAAAGATGGAG...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | GGCTCGCCGGGGTGCGTGTCTCGCCGCGGCTCAGCCGGTTGCTGCTaGGAGCCGTCGTCACCCGCGGCCGCCTCGGACTTGTCGGCATCG | + |
Preference number: 5 (lower is better) Translates to: GSPGCVSRRGSAGCC*EPSSPAAASDLSAS Trigger: CGATGCCGACAAGTCCGAGGCGGCCGCGGGTGACGACGGCTCGCAGCAGCAACCGGCTGAGCCGCGGCGAGACACGCACCCCGGCGAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067780.10 ENSMUST00000110501.8 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | TCGGGCTCGCCGGGGTGCGTGTCTCGCCGCGGCTCAGCCGGTTGCTaGTGCGAGCCGTCGTCACCCGCGGCCGCCTCGGACTTGTCGGCA | + |
Preference number: 5 (lower is better) Translates to: SGSPGCVSRRGSAGC*CEPSSPAAASDLSA Trigger: TGCCGACAAGTCCGAGGCGGCCGCGGGTGACGACGGCTCGCAGCAGCAACCGGCTGAGCCGCGGCGAGACACGCACCCCGGCGAGCCCGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067780.10 ENSMUST00000110501.8 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | ACGCCGTTGGCGCTGCTGCGCGGCGGTTTCTCGGGCTCGCCGGGGTaGGTGTCTCGCCGCGGCTCAGCCGGTTGCTGCTGCGAGCCGTCG | + |
Preference number: 5 (lower is better) Translates to: TPLALLRGGFSGSPG*VSRRGSAGCCCEPS Trigger: CGACGGCTCGCAGCAGCAACCGGCTGAGCCGCGGCGAGACACGCACCCCGGCGAGCCCGAGAAACCGCCGCGCAGCAGCGCCAACGGCGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067780.10 ENSMUST00000110501.8 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | TTCTCGGGCTCGCCGGGGTGCGTGTCTCGCCGCGGCTCAGCCGGTTaGTGCTGCGAGCCGTCGTCACCCGCGGCCGCCTCGGACTTGTCG | + |
Preference number: 5 (lower is better) Translates to: FSGSPGCVSRRGSAG*CCEPSSPAAASDLS Trigger: CGACAAGTCCGAGGCGGCCGCGGGTGACGACGGCTCGCAGCAGCAACCGGCTGAGCCGCGGCGAGACACGCACCCCGGCGAGCCCGAGAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067780.10 ENSMUST00000110501.8 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | TGGAGCTCATGCGGTCCAGTCCCATGCCCATGCCTCCAGTCACAGTaGTCATGCCGCTCATGCTGCCGCCTCCCATTCGGCCAACTCCAC | + |
Preference number: 5 (lower is better) Translates to: WSSCGPVPCPCLQSQ*SCRSCCRLPFGQLH Trigger: GTGGAGTTGGCCGAATGGGAGGCGGCAGCATGAGCGGCATGAGCACTGTGACTGGAGGCATGGGCATGGGACTGGACCGCATGAGCTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137091.3 |
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CDS GCA 90 bp | CCATCCTGTCGAAGCTGGAGCTCATGCGGTCCAGTCCCATGCCCATaGCTCCAGTCACAGTGCTCATGCCGCTCATGCTGCCGCCTCCCA | + |
Preference number: 5 (lower is better) Translates to: PSCRSWSSCGPVPCP*LQSQCSCRSCCRLP Trigger: TGGGAGGCGGCAGCATGAGCGGCATGAGCACTGTGACTGGAGGCATGGGCATGGGACTGGACCGCATGAGCTCCAGCTTCGACAGGATGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137091.3 |
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CDS GCA 90 bp | CCATCCTGTCGAAGCTGGAGCTCATGCGGTCCAGTCCCATGCCCATaGCTCCAGTCACAGTGCTCATGCCGCTCATGCTGCCGCCAAGTC | + |
Preference number: 5 (lower is better) Translates to: PSCRSWSSCGPVPCP*LQSQCSCRSCCRQV Trigger: GACTTGGCGGCAGCATGAGCGGCATGAGCACTGTGACTGGAGGCATGGGCATGGGACTGGACCGCATGAGCTCCAGCTTCGACAGGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS GCA 90 bp | CCATCCTGTCGAAGCTGGAGCTCATGCGGTCCAGTCCCATGCCCATaGCTCCAGTCACAGTGCTCATGCCGCTCATGCTGCCGCTTATTC | + |
Preference number: 5 (lower is better) Translates to: PSCRSWSSCGPVPCP*LQSQCSCRSCCRLF Trigger: GAATAAGCGGCAGCATGAGCGGCATGAGCACTGTGACTGGAGGCATGGGCATGGGACTGGACCGCATGAGCTCCAGCTTCGACAGGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | TGGAGCTCATGCGGTCCAGTCCCATGCCCATGCCTCCAGTCACAGTaGTCATGCCGCTCATGCTGCCGCCAAGTCTACCAAAGGAATCGC | + |
Preference number: 5 (lower is better) Translates to: WSSCGPVPCPCLQSQ*SCRSCCRQVYQRNR Trigger: GCGATTCCTTTGGTAGACTTGGCGGCAGCATGAGCGGCATGAGCACTGTGACTGGAGGCATGGGCATGGGACTGGACCGCATGAGCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS CCA 90 bp | TCCTTTCCAGTATGGCTCCAATGCCTGGCCCCATCCTGTCGAAGCTaGAGCTCATGCGGTCCAGTCCCATGCCCATGCCTCCAGTCACAG | + |
Preference number: 5 (lower is better) Translates to: SFPVWLQCLAPSCRS*SSCGPVPCPCLQSQ Trigger: CTGTGACTGGAGGCATGGGCATGGGACTGGACCGCATGAGCTCCAGCTTCGACAGGATGGGGCCAGGCATTGGAGCCATACTGGAAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | TGGAGCTCATGCGGTCCAGTCCCATGCCCATGCCTCCAGTCACAGTaGTCATGCCGCTCATGCTGCCGCTTATTCCAGTTCCTACTGGAC | + |
Preference number: 5 (lower is better) Translates to: WSSCGPVPCPCLQSQ*SCRSCCRLFQFLLD Trigger: GTCCAGTAGGAACTGGAATAAGCGGCAGCATGAGCGGCATGAGCACTGTGACTGGAGGCATGGGCATGGGACTGGACCGCATGAGCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | GCCGCTCATGCTGCCGCCTCCCATTCGGCCAACTCCACCAAAGCCTaGCATGCTATTCATTGCTTCCAGACCACCAAACCCAACTCCTCC | + |
Preference number: 5 (lower is better) Translates to: AAHAAASHSANSTKA*HAIHCFQTTKPNSS Trigger: GGAGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGGCGGCAGCATGAGCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137091.3 |
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CDS CCA 90 bp | CCCTCGGTCTACATCGATGCTCCTTTCCAGTATGGCTCCAATGCCTaGCCCCATCCTGTCGAAGCTGGAGCTCATGCGGTCCAGTCCCAT | + |
Preference number: 5 (lower is better) Translates to: PSVYIDAPFQYGSNA*PHPVEAGAHAVQSH Trigger: ATGGGACTGGACCGCATGAGCTCCAGCTTCGACAGGATGGGGCCAGGCATTGGAGCCATACTGGAAAGGAGCATCGATGTAGACCGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | AAAACCCTCGGTCTACATCGATGCTCCTTTCCAGTATGGCTCCAATaGCTGGCCCCATCCTGTCGAAGCTGGAGCTCATGCGGTCCAGTC | + |
Preference number: 5 (lower is better) Translates to: KTLGLHRCSFPVWLQ*LAPSCRSWSSCGPV Trigger: GACTGGACCGCATGAGCTCCAGCTTCGACAGGATGGGGCCAGGCATTGGAGCCATACTGGAAAGGAGCATCGATGTAGACCGAGGGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | TCATGCTGCCGCCTCCCATTCGGCCAACTCCACCAAAGCCTGCCATaGTATTCATTGCTTCCAGACCACCAAACCCAACTCCTCCTCCAA | + |
Preference number: 5 (lower is better) Translates to: SCCRLPFGQLHQSLP*YSLLPDHQTQLLLQ Trigger: TTGGAGGAGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGGCGGCAGCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137091.3 |
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CDS GCA 90 bp | TTCCGCTTCCCATGGGACCTGATAAAAACCCTCGGTCTACATCGATaGTCCTTTCCAGTATGGCTCCAATGCCTGGCCCCATCCTGTCGA | + |
Preference number: 5 (lower is better) Translates to: FRFPWDLIKTLGLHR*SFPVWLQCLAPSCR Trigger: TCGACAGGATGGGGCCAGGCATTGGAGCCATACTGGAAAGGAGCATCGATGTAGACCGAGGGTTTTTATCAGGTCCCATGGGAAGCGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | CACGGTATAGCTCTCCCATTCGGCCAACTCCACCAAAGCCTGCCATaGTATTCATTGCTTCCAGACCACCAAACCCAACTCCACTTGGAC | + |
Preference number: 5 (lower is better) Translates to: HGIALPFGQLHQSLP*YSLLPDHQTQLHLD Trigger: GTCCAAGTGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGAGCTATACCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000147105.8 |
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CDS GCA 90 bp | CACGGTATAGCTCTCCCATTCGGCCAACTCCACCAAAGCCTGCCATaGTATTCATTGCTTCCAGACCACCAAACCCAACTCCTCCTCCAA | + |
Preference number: 5 (lower is better) Translates to: HGIALPFGQLHQSLP*YSLLPDHQTQLLLQ Trigger: TTGGAGGAGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGAGCTATACCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142718.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | CACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCTCACACTGCCTGCCATGCTATTCATaGCTTCCAGACCACCAAACC | + |
Preference number: 5 (lower is better) Translates to: HSWAQTPTNMYTLLSSHCLPCYS*LPDHQT Trigger: GGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAG...GCAGTGTGAGGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS GCA 90 bp | CTCTCCCATTCGGCCAACTCCACCAAAGCCTGCCATGCTATTCATTaGTTCCAGACCACCAAACCCAACTCCACTTGGACCCAAATTTCC | + |
Preference number: 5 (lower is better) Translates to: LSHSANSTKACHAIH*FQTTKPNSTWTQIS Trigger: GGAAATTTGGGTCCAAGTGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000147105.8 |
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CDS GCA 90 bp | GCCTCCCATTCGGCCAACTCCACCAAAGCCTGCCATGCTATTCATTaGTTCCAGACCACCAAACCCAACTCCTCCTCCAATTCTATTCAC | + |
Preference number: 5 (lower is better) Translates to: ASHSANSTKACHAIH*FQTTKPNSSSNSIH Trigger: GTGAATAGAATTGGAGGAGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137091.3 |
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CDS TCA 90 bp | GGTAAATTCACCAACCCAGATCCCACATCGGAGGCATGTGATCCTTaGAATGATGTTCCTGTTCGCTGCAGTGCCCGGCGAGCATTTTCT | + |
Preference number: 5 (lower is better) Translates to: GKFTNPDPTSEACDP*NDVPVRCSARRAFS Trigger: AGAAAATGCTCGCCGGGCACTGCAGCGAACAGGAACATCATTTCAAGGATCACATGCCTCCGATGTGGGATCTGGGTTGGTGAATTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | CTCTCCCATTCGGCCAACTCCACCAAAGCCTGCCATGCTATTCATTaGTTCCAGACCACCAAACCCAACTCCTCCTCCAATTCTATTCAC | + |
Preference number: 5 (lower is better) Translates to: LSHSANSTKACHAIH*FQTTKPNSSSNSIH Trigger: GTGAATAGAATTGGAGGAGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142718.8 ENSMUST00000152367.8 |
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CDS CCA 90 bp | CACAGTGCTCATGCCGCTCATGCTGCCGCTTATTCCAGTTCCTACTaGACCCATGTTAGAAGCTCCTATTCTTCCTGCAAACCCTCCAAT | + |
Preference number: 5 (lower is better) Translates to: HSAHAAHAAAYSSSY*THVRSSYSSCKPSN Trigger: ATTGGAGGGTTTGCAGGAAGAATAGGAGCTTCTAACATGGGTCCAGTAGGAACTGGAATAAGCGGCAGCATGAGCGGCATGAGCACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS CCA 90 bp | ACTCCACTTGGACCCAAATTTCCCATTACACCAGTTATGTTCAGCTaGCTGGCACTAATAGGCTGTCCACCTGGACCAAGTCCCATTCCA | + |
Preference number: 5 (lower is better) Translates to: TPLGPKFPITPVMFS*LALIGCPPGPSPIP Trigger: TGGAATGGGACTTGGTCCAGGTGGACAGCCTATTAGTGCCAGCCAGCTGAACATAACTGGTGTAATGGGAAATTTGGGTCCAAGTGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACCACGCCACAACCCCTaGATTTTCCTTCCGCATCCT | + |
Preference number: 5 (lower is better) Translates to: DRKLGVVCLVLYLGLATLPRHNP*IFLPHP Trigger: AGGATGCGGAAGGAAAATCAAGGGGTTGTGGCGTGG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | CACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCTCACACTGCCTAACAAATATCTGGTaGCCTTTGGAGCCTAATCTG | + |
Preference number: 5 (lower is better) Translates to: HSWAQTPTNMYTLLSSHCLTNIW*PLEPNL Trigger: CAGATTAGGCTCCAAAGGCAACCAGATATTTGTTAG...GCAGTGTGAGGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS CCA 90 bp | ATACCACTTGGACCCAAATTTCCCATTACACCAGTTATGTTCAGCTaGCTGGCACTAATAGGCTGTCCACCTGGACCAAGTCCCATTCCA | + |
Preference number: 5 (lower is better) Translates to: IPLGPKFPITPVMFS*LALIGCPPGPSPIP Trigger: TGGAATGGGACTTGGTCCAGGTGGACAGCCTATTAGTGCCAGCCAGCTGAACATAACTGGTGTAATGGGAAATTTGGGTCCAAGTGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCACCACGCCACAACCCCTaGATTTTCCTTCCGCATCCT | + |
Preference number: 5 (lower is better) Translates to: AILLQVKETWLYLTSWDPPRHNP*IFLPHP Trigger: AGGATGCGGAAGGAAAATCAAGGGGTTGTGGCGTGG...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | CACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCTCACACTGCCCGAATTCTTATCTTTaGAATAAGGATGGAACCGAT | + |
Preference number: 5 (lower is better) Translates to: HSWAQTPTNMYTLLSSHCPNSYL*NKDGTD Trigger: ATCGGTTCCATCCTTATTCAAAAGATAAGAATTCGG...GCAGTGTGAGGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR CAA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGCCACGCCACAACCCCTaGATTTTCCTTCCGCATCCT | + |
Preference number: 5 (lower is better) Translates to: LPWFIKTAFTNASAPIEVPRHNP*IFLPHP Trigger: AGGATGCGGAAGGAAAATCAAGGGGTTGTGGCGTGG...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | TTCACTGACCACAGCTGGGCCCAGACACCTACTAACATGTACACACTGCTGTCCAATAAAAACTGCCCATaGAACATGGAAATTGCTTGG | + |
Preference number: 5 (lower is better) Translates to: FTDHSWAQTPTNMYTLLSNKNCP*NMEIAW Trigger: CCAAGCAATTTCCATGTTCAATGGGCAGTTTTTATT...GGACAGCAGTGTGTACATGTTAGTAGGTGTCTGGGCCCAGCTGTGGTCAGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR CAA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCACTGCCATGCTATTCATaGCTTCCAGACCACCAAACC | + |
Preference number: 5 (lower is better) Translates to: AILLQVKETWLYLTSWDPLPCYS*LPDHQT Trigger: GGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAG...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | CTAACATGTACACACTGCTGTCCTCACACTGCTGGGGCTAAAGAATTACAACACCAAACCCTCCAATCATaGCACTGCCAAGTCTACCAA | + |
Preference number: 5 (lower is better) Translates to: LTCTHCCPHTAGAKELQHQTLQS*HCQVYQ Trigger: TTGGTAGACTTGGCAGTGCAATGATTGGAGGGTTTG...GTGTTGTAATTCTTTAGCCCCAGCAGTGTGAGGACAGCAGTGTGTACATGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS GCA 90 bp | TATTCCAGTTCCTACTGGACCCATGTTAGAAGCTCCTATTCTTCCTaGAAACCCTCCAATCATTGCACTGCCAAGTCTACCAAAGGAATC | + |
Preference number: 5 (lower is better) Translates to: YSSSYWTHVRSSYSS*KPSNHCTAKSTKGI Trigger: GATTCCTTTGGTAGACTTGGCAGTGCAATGATTGGAGGGTTTGCAGGAAGAATAGGAGCTTCTAACATGGGTCCAGTAGGAACTGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | CTAACATGTACACACTGCTGTCCTCACACTGCTGGGGCTAAAGAATTACAACACACACTCTGTTCCGATTaGGACCTTTCTTTTCTCCAG | + |
Preference number: 5 (lower is better) Translates to: LTCTHCCPHTAGAKELQHTLCSD*DLSFLQ Trigger: CTGGAGAAAAGAAAGGTCCAAATCGGAACAGAGTGT...GTGTTGTAATTCTTTAGCCCCAGCAGTGTGAGGACAGCAGTGTGTACATGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110501.8 |
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CDS-3UTR CAA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATCTGCCATGCTATTCATaGCTTCCAGACCACCAAACC | + |
Preference number: 5 (lower is better) Translates to: AGKGDMAISNIVGSNVFDLPCYS*LPDHQT Trigger: GGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAG...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTAAATATCTGGTTGCCTTaGGAGCCTAATCTGTCTCTC | + |
Preference number: 5 (lower is better) Translates to: DRKLGVVCLVLYLGLATLNIWLP*EPNLSL Trigger: GAGAGACAGATTAGGCTCCAAAGGCAACCAGATATT...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAACACTCTGTTCCGATTaGGACCTTTCTTTTCTCCAG | + |
Preference number: 5 (lower is better) Translates to: AILLQVKETWLYLTSWDPTLCSD*DLSFLQ Trigger: CTGGAGAAAAGAAAGGTCCAAATCGGAACAGAGTGT...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTCCACGCCACAACCCCTaGATTTTCCTTCCGCATCCT | + |
Preference number: 5 (lower is better) Translates to: HEEDKNVQVACIFAVSNFPRHNP*IFLPHP Trigger: AGGATGCGGAAGGAAAATCAAGGGGTTGTGGCGTGG...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGCCACGCCACAACCCCTaGATTTTCCTTCCGCATCCT | + |
Preference number: 5 (lower is better) Translates to: PGSLHICRIQFFPIRTYLPRHNP*IFLPHP Trigger: AGGATGCGGAAGGAAAATCAAGGGGTTGTGGCGTGG...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACTGCTCTTGCCATCCTaGTCTTCTTTAATATCAGCT | + |
Preference number: 5 (lower is better) Translates to: DRKLGVVCLVLYLGLATLLLLPS*SSLISA Trigger: AGCTGATATTAAAGAAGACAAGGATGGCAAGAGCAG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAGAACATGGAAATTGCTaGGACTGCTTCAATTGCCTG | + |
Preference number: 5 (lower is better) Translates to: AILLQVKETWLYLTSWDPEHGNC*DCFNCL Trigger: CAGGCAATTGAAGCAGTCCAAGCAATTTCCATGTTC...TGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATGAACATGGAAATTGCTaGGACTGCTTCAATTGCCTG | + |
Preference number: 5 (lower is better) Translates to: ELTPRSGKLEQTNSATENEHGNC*DCFNCL Trigger: CAGGCAATTGAAGCAGTCCAAGCAATTTCCATGTTC...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGCTGCCATGCTATTCATaGCTTCCAGACCACCAAACC | + |
Preference number: 5 (lower is better) Translates to: TTCYSSAGKGDMAISNIVLPCYS*LPDHQT Trigger: GGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAG...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GAGCTTACACCAAGGTCGGGAAAACTGGAACAGACAAACTCTGCTACTGAAAATAATATCTGGTTGCCTTaGGAGCCTAATCTGTCTCTC | + |
Preference number: 5 (lower is better) Translates to: ELTPRSGKLEQTNSATENNIWLP*EPNLSL Trigger: GAGAGACAGATTAGGCTCCAAAGGCAACCAGATATT...ATTTTCAGTAGCAGAGTTTGTCTGTTCCAGTTTTCCCGACCTTGGTGTAAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACTAACAAATATCTGGTaGCCTTTGGAGCCTAATCTG | + |
Preference number: 5 (lower is better) Translates to: DRKLGVVCLVLYLGLATLLTNIW*PLEPNL Trigger: CAGATTAGGCTCCAAAGGCAACCAGATATTTGTTAG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCCAAACCCTCCAATCATaGCACTGCCAAGTCTACCAA | + |
Preference number: 5 (lower is better) Translates to: VKETWLYLTSWDPMCLICQTLQS*HCQVYQ Trigger: TTGGTAGACTTGGCAGTGCAATGATTGGAGGGTTTG...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067780.10 |
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CDS-3UTR CAA 90 bp | GCAGGTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATAATATCTGGTTGCCTTaGGAGCCTAATCTGTCTCTC | + |
Preference number: 5 (lower is better) Translates to: AGKGDMAISNIVGSNVFDNIWLP*EPNLSL Trigger: GAGAGACAGATTAGGCTCCAAAGGCAACCAGATATT...ATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTACCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GACCGAAAGTTGGGGGTGGTCTGCCTAGTGTTATACTTAGGACTTGCTACTTTACCGAATTCTTATCTTTaGAATAAGGATGGAACCGAT | + |
Preference number: 5 (lower is better) Translates to: DRKLGVVCLVLYLGLATLPNSYL*NKDGTD Trigger: ATCGGTTCCATCCTTATTCAAAAGATAAGAATTCGG...TAAAGTAGCAAGTCCTAAGTATAACACTAGGCAGACCACCCCCAACTTTCGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGACACTCTGTTCCGATTaGGACCTTTCTTTTCTCCAG | + |
Preference number: 5 (lower is better) Translates to: TTCYSSAGKGDMAISNIVTLCSD*DLSFLQ Trigger: CTGGAGAAAAGAAAGGTCCAAATCGGAACAGAGTGT...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCACACTCTGTTCCGATTaGGACCTTTCTTTTCTCCAG | + |
Preference number: 5 (lower is better) Translates to: VKETWLYLTSWDPMCLICTLCSD*DLSFLQ Trigger: CTGGAGAAAAGAAAGGTCCAAATCGGAACAGAGTGT...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCGAACATGGAAATTGCTaGGACTGCTTCAATTGCCTG | + |
Preference number: 5 (lower is better) Translates to: VKETWLYLTSWDPMCLICEHGNC*DCFNCL Trigger: CAGGCAATTGAAGCAGTCCAAGCAATTTCCATGTTC...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CAA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGCTGCTCTTGCCATCCTaGTCTTCTTTAATATCAGCT | + |
Preference number: 5 (lower is better) Translates to: TTCYSSAGKGDMAISNIVLLLPS*SSLISA Trigger: AGCTGATATTAAAGAAGACAAGGATGGCAAGAGCAG...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CAA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACACTGCCATGCTATTCATaGCTTCCAGACCACCAAACC | + |
Preference number: 5 (lower is better) Translates to: GSLHICRIQFFPIRTYLTLPCYS*LPDHQT Trigger: GGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAG...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTCAAACCCTCCAATCATaGCACTGCCAAGTCTACCAA | + |
Preference number: 5 (lower is better) Translates to: HEEDKNVQVACIFAVSNFQTLQS*HCQVYQ Trigger: TTGGTAGACTTGGCAGTGCAATGATTGGAGGGTTTG...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
||
CDS-3UTR CAA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGCTAACAAATATCTGGTaGCCTTTGGAGCCTAATCTG | + |
Preference number: 5 (lower is better) Translates to: LPWFIKTAFTNASAPIEVLTNIW*PLEPNL Trigger: CAGATTAGGCTCCAAAGGCAACCAGATATTTGTTAG...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | CATGAAGAAGATAAGAATGTCCAGGTAGCTTGCATATTTGCCGTATCCAATTTTGAACATGGAAATTGCTaGGACTGCTTCAATTGCCTG | + |
Preference number: 5 (lower is better) Translates to: HEEDKNVQVACIFAVSNFEHGNC*DCFNCL Trigger: CAGGCAATTGAAGCAGTCCAAGCAATTTCCATGTTC...AAAATTGGATACGGCAAATATGCAAGCTACCTGGACATTCTTATCTTCTTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGAATATCTGGTTGCCTTaGGAGCCTAATCTGTCTCTC | + |
Preference number: 5 (lower is better) Translates to: PGSLHICRIQFFPIRTYLNIWLP*EPNLSL Trigger: GAGAGACAGATTAGGCTCCAAAGGCAACCAGATATT...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS GCA 90 bp | AAGTCAAGATTAGCAACAAAAATTGTGGAACCAAGTCTACCAGCCTaGAAATTGCTGATAACCTCAGGAGGAATGTTTGGATTATTGAGA | + |
Preference number: 5 (lower is better) Translates to: KSRLATKIVEPSLPA*KLLITSGGMFGLLR Trigger: TCTCAATAATCCAAACATTCCTCCTGAGGTTATCAGCAATTTGCAGGCTGGTAGACTTGGTTCCACAATTTTTGTTGCTAATCTTGACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | CTTCCCTGGTTTATTAAGACTGCATTTACGAATGCATCTGCTCCTATAGAAGTGCCGAATTCTTATCTTTaGAATAAGGATGGAACCGAT | + |
Preference number: 5 (lower is better) Translates to: LPWFIKTAFTNASAPIEVPNSYL*NKDGTD Trigger: ATCGGTTCCATCCTTATTCAAAAGATAAGAATTCGG...CACTTCTATAGGAGCAGATGCATTCGTAAATGCAGTCTTAATAAACCAGGGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CAA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCCCGAATTCTTATCTTTaGAATAAGGATGGAACCGAT | + |
Preference number: 5 (lower is better) Translates to: VKETWLYLTSWDPMCLICPNSYL*NKDGTD Trigger: ATCGGTTCCATCCTTATTCAAAAGATAAGAATTCGG...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
||
CDS-3UTR CAA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACAACACTCTGTTCCGATTaGGACCTTTCTTTTCTCCAG | + |
Preference number: 5 (lower is better) Translates to: GSLHICRIQFFPIRTYLTTLCSD*DLSFLQ Trigger: CTGGAGAAAAGAAAGGTCCAAATCGGAACAGAGTGT...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCGGAATGTTTGGATTATaGAGAATGGAAGGTGGTAAA | + |
Preference number: 5 (lower is better) Translates to: VKETWLYLTSWDPMCLICGMFGL*RMEGGK Trigger: TTTACCACCTTCCATTCTCAATAATCCAAACATTCC...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | CCAGGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGCTGCTCTTGCCATCCTaGTCTTCTTTAATATCAGCT | + |
Preference number: 5 (lower is better) Translates to: PGSLHICRIQFFPIRTYLLLLPS*SSLISA Trigger: AGCTGATATTAAAGAAGACAAGGATGGCAAGAGCAG...CAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACAGAACATGGAAATTGCTaGGACTGCTTCAATTGCCTG | + |
Preference number: 5 (lower is better) Translates to: GSLHICRIQFFPIRTYLTEHGNC*DCFNCL Trigger: CAGGCAATTGAAGCAGTCCAAGCAATTTCCATGTTC...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | ACAACATGCTATTCTTCTGCAGGTAAAGGAGACATGGCTATATCTAACATCGTGAATAAAAACTGCCCATaGAACATGGAAATTGCTTGG | + |
Preference number: 5 (lower is better) Translates to: TTCYSSAGKGDMAISNIVNKNCP*NMEIAW Trigger: CCAAGCAATTTCCATGTTCAATGGGCAGTTTTTATT...CACGATGTTAGATATAGCCATGTCTCCTTTACCTGCAGAAGAATAGCATGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GTAAAGGAGACATGGCTATATCTAACATCGTGGGATCCAATGTGTTTGATATGCAATAAAAACTGCCCATaGAACATGGAAATTGCTTGG | + |
Preference number: 5 (lower is better) Translates to: VKETWLYLTSWDPMCLICNKNCP*NMEIAW Trigger: CCAAGCAATTTCCATGTTCAATGGGCAGTTTTTATT...GCATATCAAACACATTGGATCCCACGATGTTAGATATAGCCATGTCTCCTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACAAATATCTGGTTGCCTTaGGAGCCTAATCTGTCTCTC | + |
Preference number: 5 (lower is better) Translates to: GSLHICRIQFFPIRTYLTNIWLP*EPNLSL Trigger: GAGAGACAGATTAGGCTCCAAAGGCAACCAGATATT...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCCTGCTCTTGCCATCCTaGTCTTCTTTAATATCAGCT | + |
Preference number: 5 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSLLLPS*SSLISA Trigger: AGCTGATATTAAAGAAGACAAGGATGGCAAGAGCAG...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAACTGCTCTTGCCATCCTaGTCTTCTTTAATATCAGCT | + |
Preference number: 5 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQLLLPS*SSLISA Trigger: AGCTGATATTAAAGAAGACAAGGATGGCAAGAGCAG...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCCTAACAAATATCTGGTaGCCTTTGGAGCCTAATCTG | + |
Preference number: 5 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSLTNIW*PLEPNL Trigger: CAGATTAGGCTCCAAAGGCAACCAGATATTTGTTAG...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACACTAACAAATATCTGGTaGCCTTTGGAGCCTAATCTG | + |
Preference number: 5 (lower is better) Translates to: GSLHICRIQFFPIRTYLTLTNIW*PLEPNL Trigger: CAGATTAGGCTCCAAAGGCAACCAGATATTTGTTAG...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAACCGAATTCTTATCTTTaGAATAAGGATGGAACCGAT | + |
Preference number: 5 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQPNSYL*NKDGTD Trigger: ATCGGTTCCATCCTTATTCAAAAGATAAGAATTCGG...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | GCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACATCAGGCAAGGAATGTTTGGATTATaGAGAATGGAAGGTGGTAAA | + |
Preference number: 5 (lower is better) Translates to: AYLPYPIFPNKNIFDIRQGMFGL*RMEGGK Trigger: TTTACCACCTTCCATTCTCAATAATCCAAACATTCC...TTGCCTGATGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | AGTAATTTAAACCAAACCAAAATCCATCCTAATTTGTCTGAGCCCTTTCTTTCCGGAATGTTTGGATTATaGAGAATGGAAGGTGGTAAA | + |
Preference number: 5 (lower is better) Translates to: SNLNQTKIHPNLSEPFLSGMFGL*RMEGGK Trigger: TTTACCACCTTCCATTCTCAATAATCCAAACATTCC...GGAAAGAAAGGGCTCAGACAAATTAGGATGGATTTTGGTTTGGTTTAAATTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067780.10 ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS-3UTR CAA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACAGGAATGTTTGGATTATaGAGAATGGAAGGTGGTAAA | + |
Preference number: 5 (lower is better) Translates to: GSLHICRIQFFPIRTYLTGMFGL*RMEGGK Trigger: TTTACCACCTTCCATTCTCAATAATCCAAACATTCC...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS-3UTR CAA 90 bp | GGTAGCTTGCATATTTGCCGTATCCAATTTTTCCCAATAAGAACATATTTGACAAATAAAAACTGCCCATaGAACATGGAAATTGCTTGG | + |
Preference number: 5 (lower is better) Translates to: GSLHICRIQFFPIRTYLTNKNCP*NMEIAW Trigger: CCAAGCAATTTCCATGTTCAATGGGCAGTTTTTATT...TGTCAAATATGTTCTTATTGGGAAAAATTGGATACGGCAAATATGCAAGCTACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS GCA 72 bp | CCGGGGTGCGTGTCTCGCCGCGGCTCAGCCGGTTGCTaGTGCGAGCCGTCGTCACCCGCGGCCGCCTCGGAC | + |
Preference number: 6 (lower is better) Translates to: PGCVSRRGSAGC*CEPSSPAAASD Trigger: GTCCGAGGCGGCCGCGGGTGACGACGGCTCGCAGCAGCAACCGGCTGAGCCGCGGCGAGACACGCACCCCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067780.10 ENSMUST00000110501.8 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 72 bp | TCGCCGGGGTGCGTGTCTCGCCGCGGCTCAGCCGGTTaGTGCTGCGAGCCGTCGTCACCCGCGGCCGCCTCG | + |
Preference number: 6 (lower is better) Translates to: SPGCVSRRGSAG*CCEPSSPAAAS Trigger: CGAGGCGGCCGCGGGTGACGACGGCTCGCAGCAGCAACCGGCTGAGCCGCGGCGAGACACGCACCCCGGCGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067780.10 ENSMUST00000110501.8 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS CAA 72 bp | CTCGCCGGGGTGCGTGTCTCGCCGCGGCTCAGCCGGTaGCTGCTGCGAGCCGTCGTCACCCGCGGCCGCCTC | + |
Preference number: 6 (lower is better) Translates to: LAGVRVSPRLSR*LLRAVVTRGRL Trigger: GAGGCGGCCGCGGGTGACGACGGCTCGCAGCAGCAACCGGCTGAGCCGCGGCGAGACACGCACCCCGGCGAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067780.10 ENSMUST00000110501.8 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 72 bp | GCGCTGCTGCGCGGCGGTTTCTCGGGCTCGCCGGGGTaGGTGTCTCGCCGCGGCTCAGCCGGTTGCTGCTGC | + |
Preference number: 6 (lower is better) Translates to: ALLRGGFSGSPG*VSRRGSAGCCC Trigger: GCAGCAGCAACCGGCTGAGCCGCGGCGAGACACGCACCCCGGCGAGCCCGAGAAACCGCCGCGCAGCAGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067780.10 ENSMUST00000110501.8 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS CAA 90 bp | TTTCTCGGGCTCGCCGGGGTGCGTGTCTCGCCGCGGCTCAGCCGGTaGCTGCTGCGAGCCGTCGTCACCCGCGGCCGCCTCGGACTTGTC | + |
Preference number: 6 (lower is better) Translates to: FLGLAGVRVSPRLSR*LLRAVVTRGRLGLV Trigger: GACAAGTCCGAGGCGGCCGCGGGTGACGACGGCTCGCAGCAGCAACCGGCTGAGCCGCGGCGAGACACGCACCCCGGCGAGCCCGAGAAA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067780.10 ENSMUST00000110501.8 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 72 bp | TGCGGTCCAGTCCCATGCCCATGCCTCCAGTCACAGTaGTCATGCCGCTCATGCTGCCGCCTCCCATTCGGC | + |
Preference number: 6 (lower is better) Translates to: CGPVPCPCLQSQ*SCRSCCRLPFG Trigger: GCCGAATGGGAGGCGGCAGCATGAGCGGCATGAGCACTGTGACTGGAGGCATGGGCATGGGACTGGACCGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137091.3 |
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CDS GCA 72 bp | CGAAGCTGGAGCTCATGCGGTCCAGTCCCATGCCCATaGCTCCAGTCACAGTGCTCATGCCGCTCATGCTGC | + |
Preference number: 6 (lower is better) Translates to: RSWSSCGPVPCP*LQSQCSCRSCC Trigger: GCAGCATGAGCGGCATGAGCACTGTGACTGGAGGCATGGGCATGGGACTGGACCGCATGAGCTCCAGCTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 72 bp | TGCGGTCCAGTCCCATGCCCATGCCTCCAGTCACAGTaGTCATGCCGCTCATGCTGCCGCCAAGTCTACCAA | + |
Preference number: 6 (lower is better) Translates to: CGPVPCPCLQSQ*SCRSCCRQVYQ Trigger: TTGGTAGACTTGGCGGCAGCATGAGCGGCATGAGCACTGTGACTGGAGGCATGGGCATGGGACTGGACCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142718.8 ENSMUST00000147105.8 |
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CDS GCA 72 bp | TGCGGTCCAGTCCCATGCCCATGCCTCCAGTCACAGTaGTCATGCCGCTCATGCTGCCGCTTATTCCAGTTC | + |
Preference number: 6 (lower is better) Translates to: CGPVPCPCLQSQ*SCRSCCRLFQF Trigger: GAACTGGAATAAGCGGCAGCATGAGCGGCATGAGCACTGTGACTGGAGGCATGGGCATGGGACTGGACCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS TCA 72 bp | ACCAACCCAGATCCCACATCGGAGGCATGTGATCCTTaGAATGATGTTCCTGTTCGCTGCAGTGCCCGGCGA | + |
Preference number: 6 (lower is better) Translates to: TNPDPTSEACDP*NDVPVRCSARR Trigger: TCGCCGGGCACTGCAGCGAACAGGAACATCATTTCAAGGATCACATGCCTCCGATGTGGGATCTGGGTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 72 bp | CGCCTCCCATTCGGCCAACTCCACCAAAGCCTGCCATaGTATTCATTGCTTCCAGACCACCAAACCCAACTC | + |
Preference number: 6 (lower is better) Translates to: RLPFGQLHQSLP*YSLLPDHQTQL Trigger: GAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137091.3 |
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CDS CAA 90 bp | TACGCATTGCGGTCCAAGCGCACATCGATTTCCCTGCCGCTGATCTaGATGCCATTCATGATCCTGCAGGCCTTTTCCGCTGACTCTGCA | + |
Preference number: 6 (lower is better) Translates to: YALRSKRTSISLPLI*MPFMILQAFSADSA Trigger: TGCAGAGTCAGCGGAAAAGGCCTGCAGGATCATGAATGGCATCAAGATCAGCGGCAGGGAAATCGATGTGCGCTTGGACCGCAATGCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 72 bp | GCTCTCCCATTCGGCCAACTCCACCAAAGCCTGCCATaGTATTCATTGCTTCCAGACCACCAAACCCAACTC | + |
Preference number: 6 (lower is better) Translates to: ALPFGQLHQSLP*YSLLPDHQTQL Trigger: GAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 72 bp | CCATGGGACCTGATAAAAACCCTCGGTCTACATCGATaGTCCTTTCCAGTATGGCTCCAATGCCTGGCCCCA | + |
Preference number: 6 (lower is better) Translates to: PWDLIKTLGLHR*SFPVWLQCLAP Trigger: TGGGGCCAGGCATTGGAGCCATACTGGAAAGGAGCATCGATGTAGACCGAGGGTTTTTATCAGGTCCCATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS CAA 72 bp | TTCGGCCAACTCCACCAAAGCCTGCCATGCTATTCATaGCTTCCAGACCACCAAACCCAACTCCACTTGGAC | + |
Preference number: 6 (lower is better) Translates to: FGQLHQSLPCYS*LPDHQTQLHLD Trigger: GTCCAAGTGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000147105.8 |
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CDS CAA 72 bp | TTCGGCCAACTCCACCAAAGCCTGCCATGCTATTCATaGCTTCCAGACCACCAAACCCAACTCCTCCTCCAA | + |
Preference number: 6 (lower is better) Translates to: FGQLHQSLPCYS*LPDHQTQLLLQ Trigger: TTGGAGGAGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000152367.8 |
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CDS CAA 90 bp | GCTCTCCCATTCGGCCAACTCCACCAAAGCCTGCCATGCTATTCATaGCTTCCAGACCACCAAACCCAACTCCACTTGGACCCAAATTTC | + |
Preference number: 6 (lower is better) Translates to: ALPFGQLHQSLPCYS*LPDHQTQLHLDPNF Trigger: GAAATTTGGGTCCAAGTGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000147105.8 |
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CDS CAA 90 bp | CGCCTCCCATTCGGCCAACTCCACCAAAGCCTGCCATGCTATTCATaGCTTCCAGACCACCAAACCCAACTCCTCCTCCAATTCTATTCA | + |
Preference number: 6 (lower is better) Translates to: RLPFGQLHQSLPCYS*LPDHQTQLLLQFYS Trigger: TGAATAGAATTGGAGGAGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137091.3 |
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CDS CAA 90 bp | GCTCTCCCATTCGGCCAACTCCACCAAAGCCTGCCATGCTATTCATaGCTTCCAGACCACCAAACCCAACTCCTCCTCCAATTCTATTCA | + |
Preference number: 6 (lower is better) Translates to: ALPFGQLHQSLPCYS*LPDHQTQLLLQFYS Trigger: TGAATAGAATTGGAGGAGGAGTTGGGTTTGGTGGTCTGGAAGCAATGAATAGCATGGCAGGCTTTGGTGGAGTTGGCCGAATGGGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142718.8 ENSMUST00000152367.8 |
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CDS CCA 72 bp | GGACCCAAATTTCCCATTACACCAGTTATGTTCAGCTaGCTGGCACTAATAGGCTGTCCACCTGGACCAAGT | + |
Preference number: 6 (lower is better) Translates to: GPKFPITPVMFS*LALIGCPPGPS Trigger: ACTTGGTCCAGGTGGACAGCCTATTAGTGCCAGCCAGCTGAACATAACTGGTGTAATGGGAAATTTGGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS CCA 72 bp | CATGCCGCTCATGCTGCCGCTTATTCCAGTTCCTACTaGACCCATGTTAGAAGCTCCTATTCTTCCTGCAAA | + |
Preference number: 6 (lower is better) Translates to: HAAHAAAYSSSY*THVRSSYSSCK Trigger: TTTGCAGGAAGAATAGGAGCTTCTAACATGGGTCCAGTAGGAACTGGAATAAGCGGCAGCATGAGCGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000152367.8 |
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CDS CCA 72 bp | CTTTGGAGCCTAATCTGTCTCTCATTCCGCTTCCCATaGGACCTGATAAAAACCCTCGGTCTACATCGATGC | + |
Preference number: 6 (lower is better) Translates to: LWSLICLSFRFP*DLIKTLGLHRC Trigger: GCATCGATGTAGACCGAGGGTTTTTATCAGGTCCCATGGGAAGCGGAATGAGAGACAGATTAGGCTCCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS GCA 72 bp | CCCATTGAACATGGAAATTGCTTGGACTGCTTCAATTaGCTGCTCAAAAGTGACAGTGCCCATGCCTCTGCT | + |
Preference number: 6 (lower is better) Translates to: PIEHGNCLDCFN*LLKSDSAHASA Trigger: AGCAGAGGCATGGGCACTGTCACTTTTGAGCAGGCAATTGAAGCAGTCCAAGCAATTTCCATGTTCAATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS CAA 90 bp | GCTTCAATTGCCTGCTCAAAAGTGACAGTGCCCATGCCTCTGCTCTaGCCATCCTTGTCTTCTTTAATATCAGCTCGCTTCACAGTTCCA | + |
Preference number: 6 (lower is better) Translates to: ASIACSKVTVPMPLL*PSLSSLISARFTVP Trigger: TGGAACTGTGAAGCGAGCTGATATTAAAGAAGACAAGGATGGCAAGAGCAGAGGCATGGGCACTGTCACTTTTGAGCAGGCAATTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS CAA 90 bp | CCAGCCTGCAAATTGCTGATAACCTCAGGAGGAATGTTTGGATTATaGAGAATGGAAGGTGGTAAATTCACCAACCCAGATCCCACATCG | + |
Preference number: 6 (lower is better) Translates to: PACKLLITSGGMFGL*RMEGGKFTNPDPTS Trigger: CGATGTGGGATCTGGGTTGGTGAATTTACCACCTTCCATTCTCAATAATCCAAACATTCCTCCTGAGGTTATCAGCAATTTGCAGGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS CAA 72 bp | TCAAAAGGAAGATTTCTAACAAATATCTGGTTGCCTTaGGAGCCTAATCTGTCTCTCATTCCGCTTCCCATG | + |
Preference number: 6 (lower is better) Translates to: SKGRFLTNIWLP*EPNLSLIPLPM Trigger: CATGGGAAGCGGAATGAGAGACAGATTAGGCTCCAAAGGCAACCAGATATTTGTTAGAAATCTTCCTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS TCA 72 bp | ACCTTTCTTTTCTCCAGTGCCCGAATTCTTATCTTTTaGATAAGGATGGAACCGATTGGCCTTCTTATTTCC | + |
Preference number: 6 (lower is better) Translates to: TFLFSSARILIF*IRMEPIGLLIS Trigger: GGAAATAAGAAGGCCAATCGGTTCCATCCTTATTCAAAAGATAAGAATTCGGGCACTGGAGAAAAGAAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |
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CDS CAA 90 bp | AGATTAGCAACAAAAATTGTGGAACCAAGTCTACCAGCCTGCAAATaGCTGATAACCTCAGGAGGAATGTTTGGATTATTGAGAATGGAA | + |
Preference number: 6 (lower is better) Translates to: RLATKIVEPSLPACK*LITSGGMFGLLRME Trigger: TTCCATTCTCAATAATCCAAACATTCCTCCTGAGGTTATCAGCAATTTGCAGGCTGGTAGACTTGGTTCCACAATTTTTGTTGCTAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000067780.10 ENSMUST00000089825.13 ENSMUST00000110501.8 ENSMUST00000137091.3 ENSMUST00000142718.8 ENSMUST00000147105.8 ENSMUST00000152367.8 |