Pregenerated sensors for MYDGF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019579Ensembl transcript IDs: ENSMUST00000019723.8
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACAGTGTGACCTGTGCAGGGCAGGGCAGCTCCTATGGGAACCAGTaGCCTAGACAAGTAGTCCCGGTCAGTGTGCCTGAGGAACGTGGA | + |
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Preference number: 1 (lower is better) Translates to: HSVTCAGQGSSYGNQ*PRQVVPVSVPEERG Trigger: TCCACGTTCCTCAGGCACACTGACCGGGACTACTTGTCTAGGGCACTGGTTCCCATAGGAGCTGCCCTGCCCTGCACAGGTCACACTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR GCA 90 bp | TCAGGAAAGCCAGGAAGTCCTTCCATCCCACCCCCGCACATGCCCTaGATCTTCCCTGGCAAAACAGGTGACCGGGCTCAGAGAGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SGKPGSPSIPPPHMP*IFPGKTGDRAQRVL Trigger: CAGAACTCTCTGAGCCCGGTCACCTGTTTTGCCAGGGAAGATGCAGGGCATGTGCGGGGGTGGGATGGAAGGACTTCCTGGCTTTCCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR GCA 90 bp | TCAAGAGAGAGAGTGACTAGTCATTGTGGGTGCAAAGTCATTGGTTaGGTTGTGACCCACTGTGCTGGCACCTATGTGACAGTCACTATT | + |
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Preference number: 1 (lower is better) Translates to: SRERVTSHCGCKVIG*VVTHCAGTYVTVTI Trigger: AATAGTGACTGTCACATAGGTGCCAGCACAGTGGGTCACAACGCAACCAATGACTTTGCACCCACAATGACTAGTCACTCTCTCTCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR CCA 90 bp | ACATTGGATGCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTGGAAGAGCAATCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: TLDAITDGCEPPCGC*ELNSGPLEEQSVLL Trigger: TAAGAGCACTGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGCATCCAATGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR CCA 90 bp | TATGAGTACACTGTCACTATCTTCAGACACACCAGAAAAGGACATTaGATGCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: YEYTVTIFRHTRKGH*MPLQMVVSHHVVAG Trigger: CCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGCATCCAATGTCCTTTTCTGGTGTGTCTGAAGATAGTGACAGTGTACTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGATGGGGACACTCATCTGTGGCTCAGAGGGGAAACCACACCACATCTTGGAGAGTTCTGCGGAGTaGCACAGTGTGACCTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: PGMGTLICGSEGKPHHILESSAE*HSVTCA Trigger: TGCACAGGTCACACTGTGTCACTCCGCAGAACTCTC...CAAGATGTGGTGTGGTTTCCCCTCTGAGCCACAGATGAGTGTCCCCATCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGGAAACCACACCACATCTTGACTTCAGGAAAGCCAGGAAGTCCTTCCATCGGAGTGACACAGTGTaGCCTGTGCAGGGCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RGETTPHLDFRKARKSFHRSDTV*PVQGRA Trigger: TGCCCTGCCCTGCACAGGTCACACTGTGTCACTCCG...ATGGAAGGACTTCCTGGCTTTCCTGAAGTCAAGATGTGGTGTGGTTTCCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGACACACCAGAAAAGGACATTGGATGCCATTACAGATGGTTGTGAGCCATCCATCTCTGAGTCCTaGCCCCACAGAGCCACCACT | + |
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Preference number: 2 (lower is better) Translates to: LQTHQKRTLDAITDGCEPSISES*PHRATT Trigger: AGTGGTGGCTCTGTGGGGTCAGGACTCAGAGATGGA...TGGCTCACAACCATCTGTAATGGCATCCAATGTCCTTTTCTGGTGTGTCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACACACACAGAGTCTCACTCTCGTGCTGGCACCTATGTaGCAGTCACTATTAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTHTQSLTLVLAPM*QSLLGE Trigger: CTCTCCTAATAGTGACTGTCACATAGGTGCCAGCAC...GAGAGTGAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAAGGACATTGGATGCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCCGTTGTGACCCACTGTaGTGGCACCTATGTGACAGT | + |
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Preference number: 2 (lower is better) Translates to: QKRTLDAITDGCEPPCGCRCDPL*WHLCDS Trigger: ACTGTCACATAGGTGCCAGCACAGTGGGTCACAACG...GCAACCACATGGTGGCTCACAACCATCTGTAATGGCATCCAATGTCCTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACGATGGGGTTAGAAAGTaGTCCTGGGATGGGGACACT | + |
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Preference number: 2 (lower is better) Translates to: WLLGIELRTSGRAISALNDGVRK*SWDGDT Trigger: AGTGTCCCCATCCCAGGACCACTTTCTAACCCCATC...GTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAAGGACATTGGATGCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCGTTAGAAAGTGGTCCTaGGATGGGGACACTCATCTG | + |
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Preference number: 2 (lower is better) Translates to: QKRTLDAITDGCEPPCGCVRKWS*DGDTHL Trigger: CAGATGAGTGTCCCCATCCCAGGACCACTTTCTAAC...GCAACCACATGGTGGCTCACAACCATCTGTAATGGCATCCAATGTCCTTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAGTACTAGAGAACACAGTGTGGATTCAAGGCATCATTGTGTCTCAAGAGAGATGAGAATCCATCTCTaGGTCCTGACCCCACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PSTREHSVDSRHHCVSREMRIHL*VLTPQS Trigger: GCTCTGTGGGGTCAGGACTCAGAGATGGATTCTCAT...CTCTCTTGAGACACAATGATGCCTTGAATCCACACTGTGTTCTCTAGTACTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGACACACCAGAAAAGGACATTGGATGCCATTACAGATGGTTGTGAGCCAGTGTCAGGAATGCAATaGCCTCTTGTTTCCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: LQTHQKRTLDAITDGCEPVSGMQ*PLVSTG Trigger: GCCAGTGGAAACAAGAGGGCATTGCATTCCTGACAC...TGGCTCACAACCATCTGTAATGGCATCCAATGTCCTTTTCTGGTGTGTCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR CCA 90 bp | CACTATCTTCAGACACACCAGAAAAGGACATTGGATGCCATTACAGATGGTTGTGGGGACACTCATCTGTaGCTCAGAGGGGAAACCACA | + |
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Preference number: 2 (lower is better) Translates to: HYLQTHQKRTLDAITDGCGDTHL*LRGETT Trigger: TGTGGTTTCCCCTCTGAGCCACAGATGAGTGTCCCC...ACAACCATCTGTAATGGCATCCAATGTCCTTTTCTGGTGTGTCTGAAGATAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAGTACACTGTCACTATCTTCAGACACACCAGAAAAGGACATTGGATGCCATTCCTATGGGAACCAGTaGCCTAGACAAGTAGTCCCG | + |
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Preference number: 2 (lower is better) Translates to: MSTLSLSSDTPEKDIGCHSYGNQ*PRQVVP Trigger: CGGGACTACTTGTCTAGGGCACTGGTTCCCATAGGA...ATGGCATCCAATGTCCTTTTCTGGTGTGTCTGAAGATAGTGACAGTGTACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR CCA 90 bp | CACTATCTTCAGACACACCAGAAAAGGACATTGGATGCCATTACAGATGGTTGTAAAGTGGTCCTGGGATaGGGACACTCATCTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: HYLQTHQKRTLDAITDGCKVVLG*GHSSVA Trigger: AGCCACAGATGAGTGTCCCCATCCCAGGACCACTTT...ACAACCATCTGTAATGGCATCCAATGTCCTTTTCTGGTGTGTCTGAAGATAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAGTACTAGAGAACACAGTGTGGATTCAAGGCATCATTGTGTCTCAAGAGAGAACCACACCACATCTTaGCTTCAGGAAAGCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PSTREHSVDSRHHCVSRENHTTS*LQESQE Trigger: TTCCTGGCTTTCCTGAAGTCAAGATGTGGTGTGGTT...CTCTCTTGAGACACAATGATGCCTTGAATCCACACTGTGTTCTCTAGTACTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR GCA 90 bp | CACTATCTTCAGACACACCAGAAAAGGACATTGGATGCCATTACAGATGGTTGTGAGAGGCTATGTGCCTaGACCTGCTGCTATTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: HYLQTHQKRTLDAITDGCERLCA*TCCYCR Trigger: TCTACAATAGCAGCAGGTGCAGGCACATAGCCTCTC...ACAACCATCTGTAATGGCATCCAATGTCCTTTTCTGGTGTGTCTGAAGATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAAAAGGACATTGGATGCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCCATGTTGCTTTCATTTaGCTTCAAAATCCTGAATCC | + |
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Preference number: 2 (lower is better) Translates to: QKRTLDAITDGCEPPCGCHVAFI*LQNPES Trigger: GGATTCAGGATTTTGAAGTCAAATGAAAGCAACATG...GCAACCACATGGTGGCTCACAACCATCTGTAATGGCATCCAATGTCCTTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR TCA 72 bp | GACCGGGCTCAGAGAGTTCTGCGGAGTGACACAGTGTaGCCTGTGCAGGGCAGGGCAGCTCCTATGGGAACC | + |
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Preference number: 3 (lower is better) Translates to: DRAQRVLRSDTV*PVQGRAAPMGT Trigger: GGTTCCCATAGGAGCTGCCCTGCCCTGCACAGGTCACACTGTGTCACTCCGCAGAACTCTCTGAGCCCGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR GCA 72 bp | CCAGGAAGTCCTTCCATCCCACCCCCGCACATGCCCTaGATCTTCCCTGGCAAAACAGGTGACCGGGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: PGSPSIPPPHMP*IFPGKTGDRAQ Trigger: CTGAGCCCGGTCACCTGTTTTGCCAGGGAAGATGCAGGGCATGTGCGGGGGTGGGATGGAAGGACTTCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR GCA 72 bp | ACCTGTGCAGGGCAGGGCAGCTCCTATGGGAACCAGTaGCCTAGACAAGTAGTCCCGGTCAGTGTGCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: TCAGQGSSYGNQ*PRQVVPVSVPE Trigger: CTCAGGCACACTGACCGGGACTACTTGTCTAGGGCACTGGTTCCCATAGGAGCTGCCCTGCCCTGCACAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR GCA 72 bp | CTCAGAGAGTTCTGCGGAGTGACACAGTGTGACCTGTaGAGGGCAGGGCAGCTCCTATGGGAACCAGTGCCC | + |
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Preference number: 3 (lower is better) Translates to: LREFCGVTQCDL*RAGQLLWEPVP Trigger: GGGCACTGGTTCCCATAGGAGCTGCCCTGCCCTGCACAGGTCACACTGTGTCACTCCGCAGAACTCTCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR GCA 72 bp | TCCCTGGCAAAACAGGTGACCGGGCTCAGAGAGTTCTaGGGAGTGACACAGTGTGACCTGTGCAGGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SLAKQVTGLREF*GVTQCDLCRAG Trigger: CCCTGCCCTGCACAGGTCACACTGTGTCACTCCGCAGAACTCTCTGAGCCCGGTCACCTGTTTTGCCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR GCA 72 bp | GAAAGCCAGGAAGTCCTTCCATCCCACCCCCGCACATaGCCTGCATCTTCCCTGGCAAAACAGGTGACCGGG | + |
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Preference number: 3 (lower is better) Translates to: ESQEVLPSHPRT*PASSLAKQVTG Trigger: CCCGGTCACCTGTTTTGCCAGGGAAGATGCAGGGCATGTGCGGGGGTGGGATGGAAGGACTTCCTGGCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR TCA 72 bp | TCATCTGTGGCTCAGAGGGGAAACCACACCACATCTTaGCTTCAGGAAAGCCAGGAAGTCCTTCCATCCCAC | + |
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Preference number: 3 (lower is better) Translates to: SSVAQRGNHTTS*LQESQEVLPSH Trigger: GTGGGATGGAAGGACTTCCTGGCTTTCCTGAAGTCAAGATGTGGTGTGGTTTCCCCTCTGAGCCACAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR CCA 72 bp | GTTAGAAAGTGGTCCTGGGATGGGGACACTCATCTGTaGCTCAGAGGGGAAACCACACCACATCTTGACTTC | + |
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Preference number: 3 (lower is better) Translates to: VRKWSWDGDTHL*LRGETTPHLDF Trigger: GAAGTCAAGATGTGGTGTGGTTTCCCCTCTGAGCCACAGATGAGTGTCCCCATCCCAGGACCACTTTCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR CAA 90 bp | ATGAGTACACTGTCACTATCTTCAGACACACCAGAAAAGGACATTGGATGCCATGTGGGGACAGTGGCCTaGCCCTGTGGTCCTAGTACT | + |
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Preference number: 3 (lower is better) Translates to: MSTLSLSSDTPEKDIGCHVGTVA*PCGPST Trigger: AGTACTAGGACCACAGGGCAAGGCCACTGTCCCCAC...ATGGCATCCAATGTCCTTTTCTGGTGTGTCTGAAGATAGTGACAGTGTACTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR GCA 72 bp | AGAGTGACTAGTCATTGTGGGTGCAAAGTCATTGGTTaGGTTGTGACCCACTGTGCTGGCACCTATGTGACA | + |
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Preference number: 3 (lower is better) Translates to: RVTSHCGCKVIG*VVTHCAGTYVT Trigger: TGTCACATAGGTGCCAGCACAGTGGGTCACAACGCAACCAATGACTTTGCACCCACAATGACTAGTCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR CCA 72 bp | GCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTGGAAGAGCAATCA | + |
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Preference number: 3 (lower is better) Translates to: AITDGCEPPCGC*ELNSGPLEEQS Trigger: TGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR TCA 72 bp | CCAGAAAAGGACATTGGATGCCATTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGAATTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEKDIGCHYRWL*ATMWLLGIELR Trigger: CCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGCATCCAATGTCCTTTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR GCA 72 bp | AATGGTGGCTCAGCAGTTAAGAGAATTGGTCGCTCTTaGAGAGGTTCACAACCACCTGTAACTCCAGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: NGGSAVKRIGRS*RGSQPPVTPVS Trigger: TGACACTGGAGTTACAGGTGGTTGTGAACCTCTGCAAGAGCGACCAATTCTCTTAACTGCTGAGCCACCATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR CCA 72 bp | TCCAGTGTCAGGAATGCAATGCCCTCTTGTTTCCACTaGCACACAAACAGTAGAGATTCACAGCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: SSVRNAMPSCFH*HTNSRDSQLSL Trigger: GAGAGAGAGCTGTGAATCTCTACTGTTTGTGTGCCAGTGGAAACAAGAGGGCATTGCATTCCTGACACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR-3UTR CAA 90 bp | GAACACAGTGTGGATTCAAGGCATCATTGTGTCTCAAGAGAGAGAGTGACTAGTAAACCACACCACATCTaGACTTCAGGAAAGCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: EHSVDSRHHCVSRERVTSKPHHI*TSGKPG Trigger: TCCTGGCTTTCCTGAAGTCAAGATGTGGTGTGGTTT...ACTAGTCACTCTCTCTCTTGAGACACAATGATGCCTTGAATCCACACTGTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR TCA 72 bp | TGGATTCAAGGCATCATTGTGTCTCAAGAGAGAGAGTaGCTAGTCATTGTGGGTGCAAAGTCATTGGTTGCG | + |
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Preference number: 3 (lower is better) Translates to: WIQGIIVSQERE*LVIVGAKSLVA Trigger: CGCAACCAATGACTTTGCACCCACAATGACTAGTCACTCTCTCTCTTGAGACACAATGATGCCTTGAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR CCA 72 bp | ACTGTCACTATCTTCAGACACACCAGAAAAGGACATTaGATGCCATTACAGATGGTTGTGAGCCACCATGTG | + |
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Preference number: 3 (lower is better) Translates to: TVTIFRHTRKGH*MPLQMVVSHHV Trigger: CACATGGTGGCTCACAACCATCTGTAATGGCATCCAATGTCCTTTTCTGGTGTGTCTGAAGATAGTGACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR TCA 72 bp | AGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCACTaGGCCATCTCTCTAACCCTTTGTTTTATTTACTTA | + |
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Preference number: 3 (lower is better) Translates to: RTSGRAISALNH*AISLTLCFIYL Trigger: TAAGTAAATAAAACAAAGGGTTAGAGAGATGGCTCAGTGGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS-3UTR CCA 90 bp | CTTCAGGAAAGCCAGGAAGTCCTTCCATCCCACCCCCGCACATGCCCTGCATCTGGGCCTCACGTCAAATaGCACGGTGGTGGGCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: LQESQEVLPSHPRTCPASGPHVK*HGGGLG Trigger: TCCGAGCCCACCACCGTGCCATTTGACGTGAGGCCC...AGATGCAGGGCATGTGCGGGGGTGGGATGGAAGGACTTCCTGGCTTTCCTGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS-3UTR CCA 90 bp | TCCCACCCCCGCACATGCCCTGCATCTTCCCTGGCAAAACAGGTGACCGGGCTCCTTTGGAGTAGGCCATaGCATACTCGATCTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SHPRTCPASSLAKQVTGLLWSRP*HTRSQH Trigger: GTGCTGAGATCGAGTATGCCATGGCCTACTCCAAAG...GAGCCCGGTCACCTGTTTTGCCAGGGAAGATGCAGGGCATGTGCGGGGGTGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS-3UTR CCA 90 bp | GATGAGAATCCATCTCTGAGTCCTGACCCCACAGAGCCACCACTAAGGTGGCTACGTCAAATGGCACGGTaGTGGGCTCGGACACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: DENPSLSPDPTEPPLRWLRQMAR*WARTQR Trigger: CCGCTGTGTCCGAGCCCACCACCGTGCCATTTGACG...TAGCCACCTTAGTGGTGGCTCTGTGGGGTCAGGACTCAGAGATGGATTCTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS-3UTR TCA 90 bp | CACTGTGCTGGCACCTATGTGACAGTCACTATTAGGAGAGGCTATGTGCCTGCATGGAGAGCTCAGCTTTaGAGGCCCCAGGCCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: HCAGTYVTVTIRRGYVPAWRAQL*RPQACE Trigger: CTCACAGGCCTGGGGCCTTCAAAGCTGAGCTCTCCA...TGCAGGCACATAGCCTCTCCTAATAGTGACTGTCACATAGGTGCCAGCACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS-3UTR GCA 90 bp | GGCTATGTGCCTGCACCTGCTGCTATTGTAGAAAACGATGAGAATCCATCTCTGGTCCCCAGGCTCATCTaGCATTGCTCGTTGGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GYVPAPAAIVENDENPSLVPRLI*HCSLVP Trigger: AGGGACCAACGAGCAATGGCAGATGAGCCTGGGGAC...CAGAGATGGATTCTCATCGTTTTCTACAATAGCAGCAGGTGCAGGCACATAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAATCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWE*NSGPLEEQSVL Trigger: GAGCACTGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS-3UTR CCA 90 bp | GAACACAGTGTGGATTCAAGGCATCATTGTGTCTCAAGAGAGAGAGTGACTAGTTCTCAAATGCGGCTTTaGAGTAGGCCATGGCATACT | + |
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Preference number: 4 (lower is better) Translates to: EHSVDSRHHCVSRERVTSSQMRL*SRPWHT Trigger: AGTATGCCATGGCCTACTCCAAAGCCGCATTTGAGA...ACTAGTCACTCTCTCTCTTGAGACACAATGATGCCTTGAATCCACACTGTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| 3UTR CAA 72 bp | CACTGTCACTATCTTCAGACACACCAGAAAAGGACATaGGATGCCATTACAGATGGTTGTGAGCCACCATGT | + |
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Preference number: 4 (lower is better) Translates to: HCHYLQTHQKRT*DAITDGCEPPC Trigger: ACATGGTGGCTCACAACCATCTGTAATGGCATCCAATGTCCTTTTCTGGTGTGTCTGAAGATAGTGACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS CCA 90 bp | ACGAATGCACGACCCCTCCGGGCCTCACGTCAAATGGCACGGTGGTaGGCTCGGACACAGCGGCGGCCAATTTCAGCGCTGCGGCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: TNARPLRASRQMARW*ARTQRRPISALRPP Trigger: TGGCGGCCGCAGCGCTGAAATTGGCCGCCGCTGTGTCCGAGCCCACCACCGTGCCATTTGACGTGAGGCCCGGAGGGGTCGTGCATTCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS CCA 90 bp | AGAACGAATGCACGACCCCTCCGGGCCTCACGTCAAATGGCACGGTaGTGGGCTCGGACACAGCGGCGGCCAATTTCAGCGCTGCGGCCG | + |
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Preference number: 5 (lower is better) Translates to: RTNARPLRASRQMAR*WARTQRRPISALRP Trigger: CGGCCGCAGCGCTGAAATTGGCCGCCGCTGTGTCCGAGCCCACCACCGTGCCATTTGACGTGAGGCCCGGAGGGGTCGTGCATTCGTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS CCA 90 bp | GTCCTGGGAGAACGAATGCACGACCCCTCCGGGCCTCACGTCAAATaGCACGGTGGTGGGCTCGGACACAGCGGCGGCCAATTTCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: VLGERMHDPSGPHVK*HGGGLGHSGGQFQR Trigger: GCGCTGAAATTGGCCGCCGCTGTGTCCGAGCCCACCACCGTGCCATTTGACGTGAGGCCCGGAGGGGTCGTGCATTCGTTCTCCCAGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS-3UTR CAA 90 bp | GGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACCGCTGGCTGTCTTCACTaGTCCCCAGGCTCATCTGCC | + |
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Preference number: 5 (lower is better) Translates to: GCWELNSGPLEEQSVLLTAGCLH*SPGSSA Trigger: GGCAGATGAGCCTGGGGACAAGTGAAGACAGCCAGC...GGTTAAGAGCACTGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACACACACAGAGTCTCACTCTCCTCGTTGGTCCCTCCTaGGGAAGCGTAGGTGAATGT | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTHTHTHTQSLTLLVGPS*GSVGEC Trigger: ACATTCACCTACGCTTCCCAAGGAGGGACCAACGAG...GAGAGTGAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS-3UTR CAA 90 bp | AGAGTGACTAGTCATTGTGGGTGCAAAGTCATTGGTTGCGTTGTGACCCACTGTGCTACGATCACCAGCTaGGAGAGCTCAGCTTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: RVTSHCGCKVIGCVVTHCATITS*ESSALK Trigger: CTTCAAAGCTGAGCTCTCCAAGCTGGTGATCGTAGC...ACAGTGGGTCACAACGCAACCAATGACTTTGCACCCACAATGACTAGTCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS CCA 72 bp | CGACCCCTCCGGGCCTCACGTCAAATGGCACGGTGGTaGGCTCGGACACAGCGGCGGCCAATTTCAGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: RPLRASRQMARW*ARTQRRPISAL Trigger: CAGCGCTGAAATTGGCCGCCGCTGTGTCCGAGCCCACCACCGTGCCATTTGACGTGAGGCCCGGAGGGGTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS CCA 72 bp | GCACGACCCCTCCGGGCCTCACGTCAAATGGCACGGTaGTGGGCTCGGACACAGCGGCGGCCAATTTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: ARPLRASRQMAR*WARTQRRPISA Trigger: CGCTGAAATTGGCCGCCGCTGTGTCCGAGCCCACCACCGTGCCATTTGACGTGAGGCCCGGAGGGGTCGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS CCA 72 bp | GAACGAATGCACGACCCCTCCGGGCCTCACGTCAAATaGCACGGTGGTGGGCTCGGACACAGCGGCGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: ERMHDPSGPHVK*HGGGLGHSGGQ Trigger: TTGGCCGCCGCTGTGTCCGAGCCCACCACCGTGCCATTTGACGTGAGGCCCGGAGGGGTCGTGCATTCGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS CCA 72 bp | AATGTACATGTAAACTTGTTCCCGGGTCCTACGTCCTaGGAGAACGAATGCACGACCCCTCCGGGCCTCACG | + |
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Preference number: 6 (lower is better) Translates to: NVHVNLFPGPTS*ENECTTPPGLT Trigger: CGTGAGGCCCGGAGGGGTCGTGCATTCGTTCTCCCAGGACGTAGGACCCGGGAACAAGTTTACATGTACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS GCA 72 bp | CTCACTTTTCAGGGGGACATCACTCTCTCTCTCAAATaGGGCTTTGGAGTAGGCCATGGCATACTCGATCTC | + |
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Preference number: 6 (lower is better) Translates to: LTFQGDITLSLK*GFGVGHGILDL Trigger: GAGATCGAGTATGCCATGGCCTACTCCAAAGCCGCATTTGAGAGAGAGAGTGATGTCCCCCTGAAAAGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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| CDS CAA 72 bp | CCCCAGGCTCATCTGCCATTGCTCGTTGGTCCCTCCTaGGGAAGCGTAGGTGAATGTACATGTAAACTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PQAHLPLLVGPS*GSVGECTCKLV Trigger: AACAAGTTTACATGTACATTCACCTACGCTTCCCAAGGAGGGACCAACGAGCAATGGCAGATGAGCCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019723.8 |
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