Pregenerated sensors for MYCN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037169Ensembl transcript IDs: ENSMUST00000043396.15, ENSMUST00000130990.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCTCCTTAGTGTCCCGAACTTCCACGGCTGTCACCAGGTGATATaGAGGAGGAAAACAAGCCACCCAGCATCCCATAAGTCAGTTTTT | + |
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Preference number: 1 (lower is better) Translates to: KLLSVPNFHGCHQVI*RRKTSHPASHKSVF Trigger: AAAAACTGACTTATGGGATGCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGGGACACTAAGGAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| 3UTR-3UTR GCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCCAGAACCCCGTGTCCTaGCCCCTACCCAGATCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ELPRLSPGDMEEENKPPSQNPVS*PLPRSR Trigger: TCTGGATCTGGGTAGGGGGCAGGACACGGGGTTCTG...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCTGTGCAAAGTGGCAGTaGCTGTCCGTGTGGGAAACG | + |
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Preference number: 2 (lower is better) Translates to: ELPRLSPGDMEEENKPPSCAKWQ*LSVWET Trigger: CGTTTCCCACACGGACAGTCACTGCCACTTTGCACA...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| 3UTR TCA 72 bp | TCCTTAGTGTCCCGAACTTCCACGGCTGTCACCAGGTaGTATGGAGGAGGAAAACAAGCCACCCAGCATCCC | + |
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Preference number: 3 (lower is better) Translates to: SLVSRTSTAVTR*YGGGKQATQHP Trigger: GGGATGCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGGGACACTAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| 3UTR TCA 72 bp | AATCTTGGACCGGAACAAGGTGACTTCACAGCCTCCTaGAGCTCCTTAGTGTCCCGAACTTCCACGGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: NLGPEQGDFTAS*SSLVSRTSTAV Trigger: GACAGCCGTGGAAGTTCGGGACACTAAGGAGCTTCAGGAGGCTGTGAAGTCACCTTGTTCCGGTCCAAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| 3UTR CCA 72 bp | AGTGTCCCGAACTTCCACGGCTGTCACCAGGTGATATaGAGGAGGAAAACAAGCCACCCAGCATCCCATAAG | + |
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Preference number: 3 (lower is better) Translates to: SVPNFHGCHQVI*RRKTSHPASHK Trigger: CTTATGGGATGCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGGGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCACCTCCTCGGCCGGGTTaGCCCACAGGTCGGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPPPRPG*PTGRPP Trigger: CGGAGGCCGACCTGTGGGGCAACCCGGCCGAGGAGG...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCCCTCCTCGGCCGGGTTaGCCCACAGGTCGGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSPPRPG*PTGRPP Trigger: CGGAGGCCGACCTGTGGGGCAACCCGGCCGAGGAGG...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR TCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCCCTCTCCGGAGGTGCTaGGGGCCTTGGCCTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSPLRRC*GPWPPH Trigger: GTGGGGAGGCCAAGGCCCTCAGCACCTCCGGAGAGG...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCACCTTGGCCTCCCCACTaGTGGCAGGACGGCCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPPWPPH*WQDGRL Trigger: CAGGCGGCCGTCCTGCCAGCAGTGGGGAGGCCAAGG...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGATGTCCTCCCCCGGTaGGGTCGAGTCGGGACCGCC | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPDVLPR*GRVGTA Trigger: GGCGGTCCCGACTCGACCCCACCGGGGGAGGACATC...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCGATGTCCTCCCCCGGTaGGGTCGAGTCGGGACCGCC | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSDVLPR*GRVGTA Trigger: GGCGGTCCCGACTCGACCCCACCGGGGGAGGACATC...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCACTCCGGGCTGTGCTCTaGGAAGGCGCGGCTGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPLRAVL*EGAAGR Trigger: TCGCCCAGCCGCGCCTTCCCAGAGCACAGCCCGGAG...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCCTCCGGGCTGTGCTCTaGGAAGGCGCGGCTGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSLRAVL*EGAAGR Trigger: TCGCCCAGCCGCGCCTTCCCAGAGCACAGCCCGGAG...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCTGGCCTCCCCACTGCTaGCAGGACGGCCGCCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSWPPHC*QDGRLH Trigger: GTGCAGGCGGCCGTCCTGCCAGCAGTGGGGAGGCCA...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCACGCTCCAGGATGTTGTaGTTGCGGCGGCGCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPRSRML*LRRRSL Trigger: CAGCGAGCGCCGCCGCAACCACAACATCCTGGAGCG...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR TCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCGCTGTCCTCCGAGTCTaGGTTTCGGGGGCTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSAVLRV*VSGAQA Trigger: AGCCTGAGCCCCCGAAACTCAGACTCGGAGGACAGC...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR TCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCTGTCCTCCGAGTCTaGGTTTCGGGGGCTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPAVLRV*VSGAQA Trigger: AGCCTGAGCCCCCGAAACTCAGACTCGGAGGACAGC...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCACCAGGATGTTGTGGTTaGGGCGGCGCTCGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPPGCCG*GGARCP Trigger: AGGACAGCGAGCGCCGCCGCAACCACAACATCCTGG...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCCCAGGATGTTGTGGTTaGGGCGGCGCTCGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSPGCCG*GGARCP Trigger: AGGACAGCGAGCGCCGCCGCAACCACAACATCCTGG...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCGCGACAACGGGGGCGTaGGCAGCAGCTCAAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSATTGA*AAAQTS Trigger: AGAAGTTTGAGCTGCTGCCCACGCCCCCGTTGTCGC...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCGACAACGGGGGCGTaGGCAGCAGCTCAAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPATTGA*AAAQTS Trigger: AGAAGTTTGAGCTGCTGCCCACGCCCCCGTTGTCGC...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR TCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGAAGCAGGGCTGCAGTaGGTCAAACTCGAGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPEAGLQ*VKLEVW Trigger: CCAGACCTCGAGTTTGACTCACTGCAGCCCTGCTTC...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR TCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCTCTCCACGTAGGGTaGGGGTGCAGCATAGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPALHVG*GCSIVV Trigger: CACAACTATGCTGCACCCTCACCCTACGTGGAGAGC...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR TCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCGCTCTCCACGTAGGGTaGGGGTGCAGCATAGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSALHVG*GCSIVV Trigger: CACAACTATGCTGCACCCTCACCCTACGTGGAGAGC...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR TCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCGAGAAGCCTCGCTCTTaGTCTTTTTCTGCGGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSEKPRS*SFSAGA Trigger: CGCCCCCGCAGAAAAAGATCAAGAGCGAGGCTTCTC...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCCGAGGTCTGGGTTCTTaGAGATCATCCCCGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSRGLGS*RSSPAW Trigger: CCATGCCGGGGATGATCTGCAAGAACCCAGACCTCG...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGGGGGCCCGTGGCCGTaGTGTAGTTTTTCGTTCACT | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPGGPWP*CSFSFT Trigger: AGTGAACGAAAAACTACAGCACGGCCACGGGCCCCC...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAACCAGCTCAGGCACATaGTCCCTGAGCGTCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPTSSGT*SLSVRK Trigger: CTTCCTGACGCTCAGGGACCATGTGCCTGAGCTGGT...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCACCAGCTCAGGCACATaGTCCCTGAGCGTCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSTSSGT*SLSVRK Trigger: CTTCCTGACGCTCAGGGACCATGTGCCTGAGCTGGT...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCATGCTGCTGCCTCGCCTaGAGTTTCTCCTTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPCCCLA*SFSFSS Trigger: GCTGGAAAAGGAGAAACTGCAGGCGAGGCAGCAGCA...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCTGCTGCTGCCTCGCCTaGAGTTTCTCCTTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSCCCLA*SFSFSS Trigger: GCTGGAAAAGGAGAAACTGCAGGCGAGGCAGCAGCA...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR TCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCTGGCCTTTTTCAAGATaGCCACCTTGGCGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSWPFSR*PPWRPS Trigger: AGAAGGCCGCCAAGGTGGTCATCTTGAAAAAGGCCA...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR TCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCATGGCCTTTTTCAAGATaGCCACCTTGGCGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPWPFSR*PPWRPS Trigger: AGAAGGCCGCCAAGGTGGTCATCTTGAAAAAGGCCA...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCATTTAGCAACTGCTGCTaGCTCGCCTGCAGTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPFSNCC*LACSFS Trigger: GGAGAAACTGCAGGCGAGGCAGCAGCAGTTGCTAAA...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCTTTAGCAACTGCTGCTaGCTCGCCTGCAGTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSFSNCC*LACSFS Trigger: GGAGAAACTGCAGGCGAGGCAGCAGCAGTTGCTAAA...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCTTCTTTAGCAACTGCTaGTGCCTCGCCTGCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSFFSNC*CLACSF Trigger: GAAACTGCAGGCGAGGCAGCAGCAGTTGCTAAAGAA...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAATCTTCTTTAGCAACTaGTGCTGCCTCGCCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPIFFSN*CCLACS Trigger: ACTGCAGGCGAGGCAGCAGCAGTTGCTAAAGAAGAT...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCATCTTCTTTAGCAACTaGTGCTGCCTCGCCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSIFFSN*CCLACS Trigger: ACTGCAGGCGAGGCAGCAGCAGTTGCTAAAGAAGAT...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGTCAAACTCGAGGTCTaGGTTCTTGCAGATCATCCC | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPVKLEV*VLADHP Trigger: GGGATGATCTGCAAGAACCCAGACCTCGAGTTTGAC...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCCAGGCTCTTCGCTTTTaGTGGAACAACACTTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: ELPRLSPGDMEEENKPPSQALRF*WNNTFE Trigger: CTCAAAAGTGTTGTTCCAGCAAAAGCGAAGAGCCTG...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR GCA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCACAGGCTCTTCGCTTTTaGTGGAACAACACTTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPQALRF*WNNTFE Trigger: CTCAAAAGTGTTGTTCCAGCAAAAGCGAAGAGCCTG...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS GCA 90 bp | TCCGGCAGCAGCATCTCCGTAGCCCAATTCGAAGGCTCCGGGCTGTaGTCTGGGAAGGCGCGGCTGGGCGACAACGGGGGCGTGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SGSSISVAQFEGSGL*SGKARLGDNGGVGS Trigger: GCTGCCCACGCCCCCGTTGTCGCCCAGCCGCGCCTTCCCAGAGCACAGCCCGGAGCCTTCGAATTGGGCTACGGAGATGCTGCTGCCGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS GCA 90 bp | CCGGGAGCCGAGCAGGCTGAGCTGACGCCCGGGGGCCCGTGGCCGTaGTGTAGTTTTTCGTTCACTGCGCGCTCTAGCTTCTCGCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGAEQAELTPGGPWP*CSFSFTARSSFSRA Trigger: TGCCCGCGAGAAGCTAGAGCGCGCAGTGAACGAAAAACTACAGCACGGCCACGGGCCCCCGGGCGTCAGCTCAGCCTGCTCGGCTCCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS GCA 90 bp | TGGAGCGCAGGTCGTTCCGGCGTTGACGCTCCAGGATGTTGTGGTTaGGGCGGCGCTCGCTGTCCTCCGAGTCTGAGTTTCGGGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WSAGRSGVDAPGCCG*GGARCPPSLSFGGS Trigger: TGAGCCCCCGAAACTCAGACTCGGAGGACAGCGAGCGCCGCCGCAACCACAACATCCTGGAGCGTCAACGCCGGAACGACCTGCGCTCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS TCA 90 bp | CCTTGGCGGCCTTCTCGTTCTTCACCAGCTCAGGCACATGGTCCCTaGGCGTCAGGAAGCTGGAGCGCAGGTCGTTCCGGCGTTGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: PWRPSRSSPAQAHGP*ASGSWSAGRSGVDA Trigger: AGCGTCAACGCCGGAACGACCTGCGCTCCAGCTTCCTGACGCTCAGGGACCATGTGCCTGAGCTGGTGAAGAACGAGAAGGCCGCCAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS GCA 90 bp | CTGATGGATGGGAACACAGCGCTTGAGGATCAGCTCGCCAGGCTGTaGTCGCCCCAGGCCCAGAGCGGAGGTCTTGGGACGCACAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LMDGNTALEDQLARL*SPQAQSGGLGTHSD Trigger: ATCACTGTGCGTCCCAAGACCTCCGCTCTGGGCCTGGGGCGAGCACAGCCTGGCGAGCTGATCCTCAAGCGCTGTGTTCCCATCCATCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCATCCTCCTCGGCCGGGTaGCCCCACAGGTCGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPSSSAG*PHRSAS Trigger: GGAGGCCGACCTGTGGGGCAACCCGGCCGAGGAGGA...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCTCCTCCTCGGCCGGGTaGCCCCACAGGTCGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELPRLSPGDMEEENKPPSSSSAG*PHRSAS Trigger: GGAGGCCGACCTGTGGGGCAACCCGGCCGAGGAGGA...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCGAGGTGCTGAGGGCCTaGGCCTCCCCACTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ELPRLSPGDMEEENKPPSEVLRA*ASPLLA Trigger: TGCCAGCAGTGGGGAGGCCAAGGCCCTCAGCACCTC...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS TCA 90 bp | CTCCAGGATGTTGTGGTTGCGGCGGCGCTCGCTGTCCTCCGAGTCTaGGTTTCGGGGGCTCAGGCTCTTCGCTTTTGCTGGAACAACACT | + |
|
Preference number: 5 (lower is better) Translates to: LQDVVVAAALAVLRV*VSGAQALRFCWNNT Trigger: AGTGTTGTTCCAGCAAAAGCGAAGAGCCTGAGCCCCCGAAACTCAGACTCGGAGGACAGCGAGCGCCGCCGCAACCACAACATCCTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS CCA 90 bp | AACTGCTGCTGCCTCGCCTGCAGTTTCTCCTTTTCCAGCAGGAGCTaGTGCTCGTTGGCCTGTAGGGCGTGCACGTACTCGGTGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NCCCLACSFSFSSRS*CSLACRACTYSVAF Trigger: AAAGGCCACCGAGTACGTGCACGCCCTACAGGCCAACGAGCACCAGCTCCTGCTGGAAAAGGAGAAACTGCAGGCGAGGCAGCAGCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCATCCAGGATGTTGTGGTaGCGGCGGCGCTCGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPSRMLW*RRRSLS Trigger: GGACAGCGAGCGCCGCCGCAACCACAACATCCTGGA...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS GCA 90 bp | TTCTCCTTTTCCAGCAGGAGCTGGTGCTCGTTGGCCTGTAGGGCGTaGACGTACTCGGTGGCCTTTTTCAAGATGACCACCTTGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSFSSRSWCSLACRA*TYSVAFFKMTTLAA Trigger: GGCCGCCAAGGTGGTCATCTTGAAAAAGGCCACCGAGTACGTGCACGCCCTACAGGCCAACGAGCACCAGCTCCTGCTGGAAAAGGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCACCCAGAGCGGAGGTCTaGGGACGCACAGTGATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPPRAEV*GRTVIV Trigger: CACGATCACTGTGCGTCCCAAGACCTCCGCTCTGGG...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCACAGGTCGTTCCGGCGTaGACGCTCCAGGATGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPQVVPA*TLQDVV Trigger: CACAACATCCTGGAGCGTCAACGCCGGAACGACCTG...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS GCA 90 bp | GTCCGAGCGTGTTCGATCTTCTTTAGCAACTGCTGCTGCCTCGCCTaGAGTTTCTCCTTTTCCAGCAGGAGCTGGTGCTCGTTGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VRACSIFFSNCCCLA*SFSFSSRSWCSLAC Trigger: ACAGGCCAACGAGCACCAGCTCCTGCTGGAAAAGGAGAAACTGCAGGCGAGGCAGCAGCAGTTGCTAAAGAAGATCGAACACGCTCGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCATCGAGGTCTGGGTTCTaGCAGATCATCCCCGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPSRSGF*QIIPGM Trigger: CATGCCGGGGATGATCTGCAAGAACCCAGACCTCGA...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCTCGAGGTCTGGGTTCTaGCAGATCATCCCCGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ELPRLSPGDMEEENKPPSSRSGF*QIIPGM Trigger: CATGCCGGGGATGATCTGCAAGAACCCAGACCTCGA...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCGGAGAAGCCTCGCTCTaGATCTTTTTCTGCGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ELPRLSPGDMEEENKPPSGEASL*IFFCGG Trigger: GCCCCCGCAGAAAAAGATCAAGAGCGAGGCTTCTCC...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGGAGAAGCCTCGCTCTaGATCTTTTTCTGCGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPGEASL*IFFCGG Trigger: GCCCCCGCAGAAAAAGATCAAGAGCGAGGCTTCTCC...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS TCA 90 bp | GCCGAAGTAGAAGTCATCTTCGTCCGGGTAGAAGCAGGGCTGCAGTaGGTCAAACTCGAGGTCTGGGTTCTTGCAGATCATCCCCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AEVEVIFVRVEAGLQ*VKLEVWVLADHPRH Trigger: ATGCCGGGGATGATCTGCAAGAACCCAGACCTCGAGTTTGACTCACTGCAGCCCTGCTTCTACCCGGACGAAGATGACTTCTACTTCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CAA 90 bp | GAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGCGTGGTTACCGCCTTGTaGTTAGAGGAGGAACGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELPRLSPGDMEEENKPPSVVTAL*LEEERL Trigger: GAGACGTTCCTCCTCTAACAACAAGGCGGTAACCAC...GCTGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAGTGGTTACCGCCTTGTaGTTAGAGGAGGAACGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPVVTAL*LEEERL Trigger: GAGACGTTCCTCCTCTAACAACAAGGCGGTAACCAC...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS-3UTR CAA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCATTCAAGATGACCACCTaGGCGGCCTTCTCGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPFKMTT*AAFSFF Trigger: GAAGAACGAGAAGGCCGCCAAGGTGGTCATCTTGAA...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS-3UTR CAA 90 bp | CCGAACTTCCACGGCTGTCACCAGGTGATATGGAGGAGGAAAACAAGCCACCCAAAAGTGGTTACCGCCTaGTTGTTAGAGGAGGAACGT | + |
|
Preference number: 5 (lower is better) Translates to: PNFHGCHQVIWRRKTSHPKVVTA*LLEEER Trigger: ACGTTCCTCCTCTAACAACAAGGCGGTAACCACTTT...TGGGTGGCTTGTTTTCCTCCTCCATATCACCTGGTGACAGCCGTGGAAGTTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS GCA 72 bp | CACTCGACGACCCACCAAGGGCACGGCCCCCGGGGCTaGTGGCACCCACTCCGGGAGCCGAGCAGGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HSTTHQGHGPRG*WHPLREPSRLS Trigger: GCTCAGCCTGCTCGGCTCCCGGAGTGGGTGCCAGCAGCCCCGGGGGCCGTGCCCTTGGTGGGTCGTCGAGTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS GCA 72 bp | GGCCTTGGCCTCCCCACTGCTGGCAGGACGGCCGCCTaGACGAGCAGGAGCAGCCACCGGGGCAGTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLGLPTAGRTAA*TSRSSHRGSSW Trigger: CCAGCTACTGCCCCGGTGGCTGCTCCTGCTCGTGCAGGCGGCCGTCCTGCCAGCAGTGGGGAGGCCAAGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS CCA 72 bp | GGGTGGGAGAGGTCGGTAGGCAGGGTGGCCCCGGTGTaGCTAGCACTCGACGACCCACCAAGGGCACGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GWERSVGRVAPV*LALDDPPRARP Trigger: GGGCCGTGCCCTTGGTGGGTCGTCGAGTGCTAGCCACACCGGGGCCACCCTGCCTACCGACCTCTCCCACCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS CAA 72 bp | AGGCCCCCGAGACCGAACGCATCCTCCTCGGCCGGGTaGCCCCACAGGTCGGCCTCCGGCAGCAGCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPPRPNASSSAG*PHRSASGSSIS Trigger: GGAGATGCTGCTGCCGGAGGCCGACCTGTGGGGCAACCCGGCCGAGGAGGATGCGTTCGGTCTCGGGGGCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS CAA 90 bp | AGGCCACCCAGGCCCCCGAGACCGAACGCATCCTCCTCGGCCGGGTaGCCCCACAGGTCGGCCTCCGGCAGCAGCATCTCCGTAGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RPPRPPRPNASSSAG*PHRSASGSSISVAQ Trigger: TTGGGCTACGGAGATGCTGCTGCCGGAGGCCGACCTGTGGGGCAACCCGGCCGAGGAGGATGCGTTCGGTCTCGGGGGCCTGGGTGGCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS CCA 72 bp | CTCCGTAGCCCAATTCGAAGGCTCCGGGCTGTGCTCTaGGAAGGCGCGGCTGGGCGACAACGGGGGCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRSPIRRLRAVL*EGAAGRQRGRG Trigger: CCCACGCCCCCGTTGTCGCCCAGCCGCGCCTTCCCAGAGCACAGCCCGGAGCCTTCGAATTGGGCTACGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS CCA 72 bp | AAGACCACGGCGGGGTCCACACATTCGGCAGCCGGGTaGGAGAGGTCGGTAGGCAGGGTGGCCCCGGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KTTAGSTHSAAG*ERSVGRVAPVW Trigger: CCACACCGGGGCCACCCTGCCTACCGACCTCTCCCACCCGGCTGCCGAATGTGTGGACCCCGCCGTGGTCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS GCA 72 bp | GGGAACACAGCGCTTGAGGATCAGCTCGCCAGGCTGTaGTCGCCCCAGGCCCAGAGCGGAGGTCTTGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: GNTALEDQLARL*SPQAQSGGLGT Trigger: CGTCCCAAGACCTCCGCTCTGGGCCTGGGGCGAGCACAGCCTGGCGAGCTGATCCTCAAGCGCTGTGTTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS CCA 72 bp | GCCTGCACGAGCAGGAGCAGCCACCGGGGCAGTAGCTaGAACAGACACACTAGTGACCGCAGCGCTGGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: ACTSRSSHRGSS*NRHTSDRSAGR Trigger: GCGACCAGCGCTGCGGTCACTAGTGTGTCTGTTCCAGCTACTGCCCCGGTGGCTGCTCCTGCTCGTGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS CAA 72 bp | GAGCGTCAGGAAGCTGGAGCGCAGGTCGTTCCGGCGTaGACGCTCCAGGATGTTGTGGTTGCGGCGGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ERQEAGAQVVPA*TLQDVVVAAAL Trigger: GAGCGCCGCCGCAACCACAACATCCTGGAGCGTCAACGCCGGAACGACCTGCGCTCCAGCTTCCTGACGCTC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS CAA 90 bp | ATGGTCCCTGAGCGTCAGGAAGCTGGAGCGCAGGTCGTTCCGGCGTaGACGCTCCAGGATGTTGTGGTTGCGGCGGCGCTCGCTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: MVPERQEAGAQVVPA*TLQDVVVAAALAVL Trigger: GAGGACAGCGAGCGCCGCCGCAACCACAACATCCTGGAGCGTCAACGCCGGAACGACCTGCGCTCCAGCTTCCTGACGCTCAGGGACCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS GCA 72 bp | GAGCAGGCTGAGCTGACGCCCGGGGGCCCGTGGCCGTaGTGTAGTTTTTCGTTCACTGCGCGCTCTAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EQAELTPGGPWP*CSFSFTARSSF Trigger: GAAGCTAGAGCGCGCAGTGAACGAAAAACTACAGCACGGCCACGGGCCCCCGGGCGTCAGCTCAGCCTGCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS CAA 72 bp | CCAGGCTGTGCTCGCCCCAGGCCCAGAGCGGAGGTCTaGGGACGCACAGTGATCGTGAAAGTGGTTACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGCARPRPRAEV*GRTVIVKVVTA Trigger: GGCGGTAACCACTTTCACGATCACTGTGCGTCCCAAGACCTCCGCTCTGGGCCTGGGGCGAGCACAGCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS GCA 72 bp | GGTCGTTCCGGCGTTGACGCTCCAGGATGTTGTGGTTaGGGCGGCGCTCGCTGTCCTCCGAGTCTGAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GRSGVDAPGCCG*GGARCPPSLSF Trigger: GAAACTCAGACTCGGAGGACAGCGAGCGCCGCCGCAACCACAACATCCTGGAGCGTCAACGCCGGAACGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS TCA 72 bp | CCTTCTCGTTCTTCACCAGCTCAGGCACATGGTCCCTaGGCGTCAGGAAGCTGGAGCGCAGGTCGTTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSRSSPAQAHGP*ASGSWSAGRSG Trigger: GCCGGAACGACCTGCGCTCCAGCTTCCTGACGCTCAGGGACCATGTGCCTGAGCTGGTGAAGAACGAGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS TCA 72 bp | CATAGTTGTGCTGCTGATGGATGGGAACACAGCGCTTaGGGATCAGCTCGCCAGGCTGTGCTCGCCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HSCAADGWEHSA*GSARQAVLAPG Trigger: GCCTGGGGCGAGCACAGCCTGGCGAGCTGATCCTCAAGCGCTGTGTTCCCATCCATCAGCAGCACAACTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS GCA 72 bp | AGGGCTGCAGTGAGTCAAACTCGAGGTCTGGGTTCTTaGAGATCATCCCCGGCATGGTGGACGCGGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAAVSQTRGLGS*RSSPAWWTRCS Trigger: GCTGCACCGCGTCCACCATGCCGGGGATGATCTGCAAGAACCCAGACCTCGAGTTTGACTCACTGCAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS CAA 72 bp | CAGGGCTGCAGTGAGTCAAACTCGAGGTCTGGGTTCTaGCAGATCATCCCCGGCATGGTGGACGCGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QGCSESNSRSGF*QIIPGMVDAVQ Trigger: CTGCACCGCGTCCACCATGCCGGGGATGATCTGCAAGAACCCAGACCTCGAGTTTGACTCACTGCAGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS CAA 90 bp | ATCAGCTCGCCAGGCTGTGCTCGCCCCAGGCCCAGAGCGGAGGTCTaGGGACGCACAGTGATCGTGAAAGTGGTTACCGCCTTGTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ISSPGCARPRPRAEV*GRTVIVKVVTALLL Trigger: TAACAACAAGGCGGTAACCACTTTCACGATCACTGTGCGTCCCAAGACCTCCGCTCTGGGCCTGGGGCGAGCACAGCCTGGCGAGCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS CAA 72 bp | TGCACGTACTCGGTGGCCTTTTTCAAGATGACCACCTaGGCGGCCTTCTCGTTCTTCACCAGCTCAGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: CTYSVAFFKMTT*AAFSFFTSSGT Trigger: TGTGCCTGAGCTGGTGAAGAACGAGAAGGCCGCCAAGGTGGTCATCTTGAAAAAGGCCACCGAGTACGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS CAA 90 bp | GCGGAGGTCTTGGGACGCACAGTGATCGTGAAAGTGGTTACCGCCTaGTTGTTAGAGGAGGAACGTCTCTTCTCTACGGTGACCACATCG | + |
|
Preference number: 6 (lower is better) Translates to: AEVLGRTVIVKVVTA*LLEEERLFSTVTTS Trigger: CGATGTGGTCACCGTAGAGAAGAGACGTTCCTCCTCTAACAACAAGGCGGTAACCACTTTCACGATCACTGTGCGTCCCAAGACCTCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS GCA 72 bp | TGTTCGATCTTCTTTAGCAACTGCTGCTGCCTCGCCTaGAGTTTCTCCTTTTCCAGCAGGAGCTGGTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CSIFFSNCCCLA*SFSFSSRSWCS Trigger: CGAGCACCAGCTCCTGCTGGAAAAGGAGAAACTGCAGGCGAGGCAGCAGCAGTTGCTAAAGAAGATCGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS GCA 72 bp | CAAGTCCGAGCGTGTTCGATCTTCTTTAGCAACTGCTaGTGCCTCGCCTGCAGTTTCTCCTTTTCCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QVRACSIFFSNC*CLACSFSFSSR Trigger: CCTGCTGGAAAAGGAGAAACTGCAGGCGAGGCAGCAGCAGTTGCTAAAGAAGATCGAACACGCTCGGACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
||
| CDS TCA 72 bp | GAAGTCATCTTCGTCCGGGTAGAAGCAGGGCTGCAGTaGGTCAAACTCGAGGTCTGGGTTCTTGCAGATCAT | + |
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Preference number: 6 (lower is better) Translates to: EVIFVRVEAGLQ*VKLEVWVLADH Trigger: ATGATCTGCAAGAACCCAGACCTCGAGTTTGACTCACTGCAGCCCTGCTTCTACCCGGACGAAGATGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS CAA 72 bp | GGACGCACAGTGATCGTGAAAGTGGTTACCGCCTTGTaGTTAGAGGAGGAACGTCTCTTCTCTACGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: GRTVIVKVVTAL*LEEERLFSTVT Trigger: GGTCACCGTAGAGAAGAGACGTTCCTCCTCTAACAACAAGGCGGTAACCACTTTCACGATCACTGTGCGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS CAA 90 bp | GAGGTCTTGGGACGCACAGTGATCGTGAAAGTGGTTACCGCCTTGTaGTTAGAGGAGGAACGTCTCTTCTCTACGGTGACCACATCGATT | + |
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Preference number: 6 (lower is better) Translates to: EVLGRTVIVKVVTAL*LEEERLFSTVTTSI Trigger: AATCGATGTGGTCACCGTAGAGAAGAGACGTTCCTCCTCTAACAACAAGGCGGTAACCACTTTCACGATCACTGTGCGTCCCAAGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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| CDS CAA 72 bp | TTGGGACGCACAGTGATCGTGAAAGTGGTTACCGCCTaGTTGTTAGAGGAGGAACGTCTCTTCTCTACGGTG | + |
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Preference number: 6 (lower is better) Translates to: LGRTVIVKVVTA*LLEEERLFSTV Trigger: CACCGTAGAGAAGAGACGTTCCTCCTCTAACAACAAGGCGGTAACCACTTTCACGATCACTGTGCGTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043396.15 ENSMUST00000130990.2 |
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