Pregenerated sensors for MYCL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028654Ensembl transcript IDs: ENSMUST00000030407.8, ENSMUST00000106252.9, ENSMUST00000144998.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAATAGCCCTGCAGAAAACCTGGGCAAGGACCGTTGGTCATGAGTaGGGATGCCAAGGCTTCCCCAGGTCCTGGGCTGTGACCCATTTC | + |
|
Preference number: 1 (lower is better) Translates to: QIALQKTWARTVGHE*GCQGFPRSWAVTHF Trigger: GAAATGGGTCACAGCCCAGGACCTGGGGAAGCCTTGGCATCCCCACTCATGACCAACGGTCCTTGCCCAGGTTTTCTGCAGGGCTATTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR CCA 90 bp | TCCAGGGGAAAGGATGTGACTCAGGCCGGCAGAGAATCAGGATGGTaGCTGCAGAGCCAGCAAAGTTGCTCGAGAAGGACAGGTTTGCAC | + |
|
Preference number: 1 (lower is better) Translates to: SRGKDVTQAGRESGW*LQSQQSCSRRTGLH Trigger: GTGCAAACCTGTCCTTCTCGAGCAACTTTGCTGGCTCTGCAGCCACCATCCTGATTCTCTGCCGGCCTGAGTCACATCCTTTCCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR TCA 90 bp | GCCCCAACAGGTACAACAGCAACTTCCGAAGCTTCCTCTAGGACTTaGGGCCAGGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATT | + |
|
Preference number: 1 (lower is better) Translates to: APTGTTATSEASSRT*GQEVIGGHHSWEPI Trigger: AATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCCTGGCCTCAAGTCCTAGAGGAAGCTTCGGAAGTTGCTGTTGTACCTGTTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR CCA 90 bp | TTCCACAGGGAGTTGCAGAACACAGCTGGAGCAAACTCTCCTTGTTaGCTGAGTAGCGTTCCTAGAGGTACACTGACAACCCACCAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: FHRELQNTAGANSPC*LSSVPRGTLTTHQE Trigger: TTCCTGGTGGGTTGTCAGTGTACCTCTAGGAACGCTACTCAGCCAACAAGGAGAGTTTGCTCCAGCTGTGTTCTGCAACTCCCTGTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR CCA 90 bp | AAGCCCTTTCTCAAAGTCATAGCATTGAGCGTGCAGGGAAGGGTGTaGCCTACCATCCAAATCTATCTTAAAGGTTTCCACTCCACAGCT | + |
|
Preference number: 1 (lower is better) Translates to: KPFLKVIALSVQGRV*PTIQIYLKGFHSTA Trigger: AGCTGTGGAGTGGAAACCTTTAAGATAGATTTGGATGGTAGGCCACACCCTTCCCTGCACGCTCAATGCTATGACTTTGAGAAAGGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR TCA 90 bp | GTCCCCCACACTGTACCCCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGAAGGACCGTTGGTCATaGGTGGGGATGCCAAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: VPHTVPLLPSPGPAGTDLKDRWS*VGMPRL Trigger: AAGCCTTGGCATCCCCACTCATGACCAACGGTCCTT...CAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGGGGTACAGTGTGGGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTCAAATAGCCCTGCAGAAAACCTGGGCAAGGACCGTTGGTCATGAGTGGGGACCGGGACAGCTCGCTTaGCTCCTGGAAAACGGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: PQIALQKTWARTVGHEWGPGQLA*LLENGA Trigger: GGCTCCGTTTTCCAGGAGGCAAGCGAGCTGTCCCGG...TCCCCACTCATGACCAACGGTCCTTGCCCAGGTTTTCTGCAGGGCTATTTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCCAGATTCCAGGGGAAAGGATGTGACTCAGGCCGGCAGAGAATCAGGATGCCAGGTCCTGGGCTGTaGCCCATTTCCCTATGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RPRFQGKGCDSGRQRIRMPGPGL*PISLCP Trigger: AGGACATAGGGAAATGGGTCACAGCCCAGGACCTGG...CATCCTGATTCTCTGCCGGCCTGAGTCACATCCTTTCCCCTGGAATCTGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | CCCCCACACTGTACCCCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTTGTGCGCACACCGGCTaGAATGCATTCTGGGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: PPHCTPTSKPRASRNRSACAHTG*NAFWDL Trigger: TAGATCCCAGAATGCATTGCAGCCGGTGTGCGCACA...AGCAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGGGGTACAGTGTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR TCA 90 bp | GTCCCCCACACTGTACCCCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGATAAGCTTGTGTCTGTaGGACCAAGAAGTCAGGCGT | + |
|
Preference number: 2 (lower is better) Translates to: VPHTVPLLPSPGPAGTDLISLCL*DQEVRR Trigger: ACGCCTGACTTCTTGGTCTCACAGACACAAGCTTAT...CAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGGGGTACAGTGTGGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGGTAGCTGGTTCTGGGGGCATCAGGTaGATGCAAGCGGTGCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GSNWRPSQLGANLEVVAGSGGIR*MQAVPL Trigger: GAGGGGCACCGCTTGCATTCACCTGATGCCCCCAGA...ACCAGCTACCACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCCAGATTCCAGGGGAAAGGATGTGACTCAGGCCGGCAGAGAATCAGGATGGCACACCGGCTGCAATaGATTCTGGGATCTACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: RPRFQGKGCDSGRQRIRMAHRLQ*ILGSTV Trigger: GACAGTAGATCCCAGAATGCATTGCAGCCGGTGTGC...CATCCTGATTCTCTGCCGGCCTGAGTCACATCCTTTCCCCTGGAATCTGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCCAGATTCCAGGGGAAAGGATGTGACTCAGGCCGGCAGAGAATCAGGATGTGTGCGCACACCGGCTaGAATGCATTCTGGGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: RPRFQGKGCDSGRQRIRMCAHTG*NAFWDL Trigger: TAGATCCCAGAATGCATTGCAGCCGGTGTGCGCACA...CATCCTGATTCTCTGCCGGCCTGAGTCACATCCTTTCCCCTGGAATCTGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCCTCAGATCATCCCCAGAGACAGCAGTGAGAGCAGCATCCTTTCCTAGCCTGGCACACCGGCTGCAATaGATTCTGGGATCTACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: VLRSSPETAVRAASFPSLAHRLQ*ILGSTV Trigger: GACAGTAGATCCCAGAATGCATTGCAGCCGGTGTGC...CAGGCTAGGAAAGGATGCTGCTCTCACTGCTGTCTCTGGGGATGATCTGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTCAAATAGCCCTGCAGAAAACCTGGGCAAGGACCGTTGGTCATGAGTGGGGAAGATTTCACGTAGGCTaGAGCCCCAACAACGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: PQIALQKTWARTVGHEWGRFHVG*SPNNVH Trigger: GTGGACGTTGTTGGGGCTGCAGCCTACGTGAAATCT...TCCCCACTCATGACCAACGGTCCTTGCCCAGGTTTTCTGCAGGGCTATTTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGATTCCACAGGGAGTTGCAGAACACAGCTGGAGCAAACTCTCCTTGTTGGCTGGTCATGAGTGGGGATaGCAAGGCTTCCCCAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LIPQGVAEHSWSKLSLLAGHEWG*QGFPRS Trigger: GGACCTGGGGAAGCCTTGGCATCCCCACTCATGACC...AGCCAACAAGGAGAGTTTGCTCCAGCTGTGTTCTGCAACTCCCTGTGGAATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGGCCAGGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGGGTCATGAGTGGGGATaGCAAGGCTTCCCCAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LRPGSNWRPSQLGANLEVGHEWG*QGFPRS Trigger: GGACCTGGGGAAGCCTTGGCATCCCCACTCATGACC...CACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCCTGGCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGGCCAGGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGCGGCTGCTAGCTTGGTaGCTTTCCCAGGATAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LRPGSNWRPSQLGANLEVRLLAW*LSQDRG Trigger: CCCTCTATCCTGGGAAAGTCACCAAGCTAGCAGCCG...CACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCCTGGCCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTCAAATAGCCCTGCAGAAAACCTGGGCAAGGACCGTTGGTCATGAGTGGGGATGCTGTGGTGGCCATTaGATAACAAAGGCAGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: PQIALQKTWARTVGHEWGCCGGH*ITKAGR Trigger: TCTTCCTGCCTTTGTTATGCAATGGCCACCACAGCA...TCCCCACTCATGACCAACGGTCCTTGCCCAGGTTTTCTGCAGGGCTATTTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGCCAGCAAAGTTGCTCGAGAAGGACAGGTTTGCACTGTTCCAGCAGATTGGAAAAGGTTCCAAGCTaGGCCTCAAATAGCCCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QSQQSCSRRTGLHCSSRLEKVPS*ASNSPA Trigger: TGCAGGGCTATTTGAGGCCCAGCTTGGAACCTTTTC...CAATCTGCTGGAACAGTGCAAACCTGTCCTTCTCGAGCAACTTTGCTGGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGCCAGCAAAGTTGCTCGAGAAGGACAGGTTTGCACTGTTCCAGCAGATTGATAAGCTTGTGTCTGTaGGACCAAGAAGTCAGGCGT | + |
|
Preference number: 2 (lower is better) Translates to: QSQQSCSRRTGLHCSSRLISLCL*DQEVRR Trigger: ACGCCTGACTTCTTGGTCTCACAGACACAAGCTTAT...CAATCTGCTGGAACAGTGCAAACCTGTCCTTCTCGAGCAACTTTGCTGGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGGTGTGGCCTACCATCCAAATCTATCTTAAAGGTTTCCACTCCACAGCTACAAGCCCTTATTGTGTaGGCACACCGGCTGCAATGC | + |
|
Preference number: 2 (lower is better) Translates to: EGCGLPSKSILKVSTPQLQALIV*AHRLQC Trigger: GCATTGCAGCCGGTGTGCGCACACAATAAGGGCTTG...TAGCTGTGGAGTGGAAACCTTTAAGATAGATTTGGATGGTAGGCCACACCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGTGTGGCCTACCATCCAAATCTATCTTAAAGGTTTCCACTCCACAGCTACTGAGATTTCACGTAGGCTaGAGCCCCAACAACGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: GCGLPSKSILKVSTPQLLRFHVG*SPNNVH Trigger: GTGGACGTTGTTGGGGCTGCAGCCTACGTGAAATCT...CAGTAGCTGTGGAGTGGAAACCTTTAAGATAGATTTGGATGGTAGGCCACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGATTCCACAGGGAGTTGCAGAACACAGCTGGAGCAAACTCTCCTTGTTGGCTAATCAGGATGGTGGCTaGAGAGCCAGCAAAGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LIPQGVAEHSWSKLSLLANQDGG*RASKVA Trigger: AGCAACTTTGCTGGCTCTGCAGCCACCATCCTGATT...AGCCAACAAGGAGAGTTTGCTCCAGCTGTGTTCTGCAACTCCCTGTGGAATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGCCAGCAAAGTTGCTCGAGAAGGACAGGTTTGCACTGTTCCAGCAGATTGGGGAAGAGGGAGAATTaGGTTTCGAGGTTACCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QSQQSCSRRTGLHCSSRLGKREN*VSRLPR Trigger: TCTTGGTAACCTCGAAACCCAATTCTCCCTCTTCCC...CAATCTGCTGGAACAGTGCAAACCTGTCCTTCTCGAGCAACTTTGCTGGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGATTCCACAGGGAGTTGCAGAACACAGCTGGAGCAAACTCTCCTTGTTGGCTGAAAAGGTTCCAAGCTaGGCCTCAAATAGCCCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LIPQGVAEHSWSKLSLLAEKVPS*ASNSPA Trigger: TGCAGGGCTATTTGAGGCCCAGCTTGGAACCTTTTC...AGCCAACAAGGAGAGTTTGCTCCAGCTGTGTTCTGCAACTCCCTGTGGAATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGGTAGCTGGTAGAGAATCAGGATGGTaGCTGCAGAGCCAGCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: GSNWRPSQLGANLEVVAGRESGW*LQSQQS Trigger: ACTTTGCTGGCTCTGCAGCCACCATCCTGATTCTCT...ACCAGCTACCACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGGTAGCTGGTGTTGCAGAACACAGCTaGAGCAAACTCTCCTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: GSNWRPSQLGANLEVVAGVAEHS*SKLSLL Trigger: CAACAAGGAGAGTTTGCTCCAGCTGTGTTCTGCAAC...ACCAGCTACCACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGTGTGGCCTACCATCCAAATCTATCTTAAAGGTTTCCACTCCACAGCTACTGGGGAAGAGGGAGAATTaGGTTTCGAGGTTACCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GCGLPSKSILKVSTPQLLGKREN*VSRLPR Trigger: TCTTGGTAACCTCGAAACCCAATTCTCCCTCTTCCC...CAGTAGCTGTGGAGTGGAAACCTTTAAGATAGATTTGGATGGTAGGCCACACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGGTAGCTGGTAGTAAGTTTACCTTCTaGGGGCATCAGGTGAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: GSNWRPSQLGANLEVVAGSKFTF*GHQVNA Trigger: TGCATTCACCTGATGCCCCCAGAAGGTAAACTTACT...ACCAGCTACCACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CAA 90 bp | GATCAAGTCTGCGAGCTTGTCTTCGCCCGGGACAGCTCGCTTGCCTCCTGGAAAGAATGCAAGCCCTTATaGTGTGCGCACACCGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: DQVCELVFARDSSLASWKECKPL*CAHTGC Trigger: GCAGCCGGTGTGCGCACACAATAAGGGCTTGCATTC...TTTCCAGGAGGCAAGCGAGCTGTCCCGGGCGAAGACAAGCTCGCAGACTTGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCACACTGTACCCCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTCTCAAAGTCATAGCATaGAGCGTGCAGGGAAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PPHCTPTSKPRASRNRSALKVIA*SVQGRV Trigger: CACCCTTCCCTGCACGCTCAATGCTATGACTTTGAG...AGCAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGGGGTACAGTGTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTTTCCTGGGTAGAGTTATCAAGTCTGCGAGCTaGTCTTCGCCCGGGACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PTSKPRASRNRSAFLGRVIKSAS*SSPGTA Trigger: AGCTGTCCCGGGCGAAGACAAGCTCGCAGACTTGAT...AACTCTACCCAGGAAAGCAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR TCA 72 bp | TCTCTCTGTAAGGCCCAGATTCCAGGGGAAAGGATGTaGCTCAGGCCGGCAGAGAATCAGGATGGTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SLCKAQIPGERM*LRPAENQDGGC Trigger: GCAGCCACCATCCTGATTCTCTGCCGGCCTGAGTCACATCCTTTCCCCTGGAATCTGGGCCTTACAGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR CCA 72 bp | GGAAAGGATGTGACTCAGGCCGGCAGAGAATCAGGATaGTGGCTGCAGAGCCAGCAAAGTTGCTCGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GKDVTQAGRESG*WLQSQQSCSRR Trigger: CCTTCTCGAGCAACTTTGCTGGCTCTGCAGCCACCATCCTGATTCTCTGCCGGCCTGAGTCACATCCTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCCAGATTCCAGGGGAAAGGATGTGACTCAGGCCGGCAGAGAATCAGGATGGCAGAGCCAGCAAAGTaGCTCGAGAAGGACAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RPRFQGKGCDSGRQRIRMAEPAK*LEKDRF Trigger: AAACCTGTCCTTCTCGAGCAACTTTGCTGGCTCTGC...CATCCTGATTCTCTGCCGGCCTGAGTCACATCCTTTCCCCTGGAATCTGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR CCA 72 bp | TTCCAAGCTGGGCCTCAAATAGCCCTGCAGAAAACCTaGGCAAGGACCGTTGGTCATGAGTGGGGATGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: FQAGPQIALQKT*ARTVGHEWGCQ Trigger: TTGGCATCCCCACTCATGACCAACGGTCCTTGCCCAGGTTTTCTGCAGGGCTATTTGAGGCCCAGCTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR CCA 72 bp | AAGGATGTGACTCAGGCCGGCAGAGAATCAGGATGGTaGCTGCAGAGCCAGCAAAGTTGCTCGAGAAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: KDVTQAGRESGW*LQSQQSCSRRT Trigger: TGTCCTTCTCGAGCAACTTTGCTGGCTCTGCAGCCACCATCCTGATTCTCTGCCGGCCTGAGTCACATCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTCCAAGCTGGGCCTCAAATAGCCCTGCAGAAAACCTGGGCAAGGACCGTTGTGCTGTGGTGGCCATaGCATAACAAAGGCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RFQAGPQIALQKTWARTVVLWWP*HNKGRK Trigger: CTTCCTGCCTTTGTTATGCAATGGCCACCACAGCAC...AACGGTCCTTGCCCAGGTTTTCTGCAGGGCTATTTGAGGCCCAGCTTGGAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGATTCCACAGGGAGTTGCAGAACACAGCTGGAGCAAACTCTCCTTGTTGGCTGAATGCAAGCCCTTATaGTGTGCGCACACCGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LIPQGVAEHSWSKLSLLAECKPL*CAHTGC Trigger: GCAGCCGGTGTGCGCACACAATAAGGGCTTGCATTC...AGCCAACAAGGAGAGTTTGCTCCAGCTGTGTTCTGCAACTCCCTGTGGAATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR TCA 72 bp | GGTACAACAGCAACTTCCGAAGCTTCCTCTAGGACTTaGGGCCAGGAAGTAATTGGAGGCCATCACAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GTTATSEASSRT*GQEVIGGHHSW Trigger: CCAACTGTGATGGCCTCCAATTACTTCCTGGCCTCAAGTCCTAGAGGAAGCTTCGGAAGTTGCTGTTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR GCA 72 bp | CAGGATAGAGGGCTGTACTTTGATTCCACAGGGAGTTaGAGAACACAGCTGGAGCAAACTCTCCTTGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QDRGLYFDSTGS*RTQLEQTLLVG Trigger: GCCAACAAGGAGAGTTTGCTCCAGCTGTGTTCTGCAACTCCCTGTGGAATCAAAGTACAGCCCTCTATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR CCA 72 bp | CCTTGTAACTATCTGCCTCGAGAAAAGGTTCCAAGCTaGGCCTCAAATAGCCCTGCAGAAAACCTGGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PCNYLPREKVPS*ASNSPAENLGK Trigger: CTTGCCCAGGTTTTCTGCAGGGCTATTTGAGGCCCAGCTTGGAACCTTTTCTCGAGGCAGATAGTTACAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR CCA 72 bp | GAGTTGCAGAACACAGCTGGAGCAAACTCTCCTTGTTaGCTGAGTAGCGTTCCTAGAGGTACACTGACAACC | + |
|
Preference number: 3 (lower is better) Translates to: ELQNTAGANSPC*LSSVPRGTLTT Trigger: GGTTGTCAGTGTACCTCTAGGAACGCTACTCAGCCAACAAGGAGAGTTTGCTCCAGCTGTGTTCTGCAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR TCA 72 bp | CAGTTGGGAGCCAATTTGGAAGTGGTAGCTGGTTTTTaGGAGCCACATGTTGTTACTTACTGTCTGTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QLGANLEVVAGF*EPHVVTYCLSP Trigger: GGGGGACAGACAGTAAGTAACAACATGTGGCTCTCAAAAACCAGCTACCACTTCCAAATTGGCTCCCAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR GCA 72 bp | ATAGGGCTTGTCCTTCAGAGGCACCTTGTAACTATCTaGCTCGAGAAAAGGTTCCAAGCTGGGCCTCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: IGLVLQRHLVTI*LEKRFQAGPQI Trigger: TATTTGAGGCCCAGCTTGGAACCTTTTCTCGAGGCAGATAGTTACAAGGTGCCTCTGAAGGACAAGCCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR GCA 72 bp | TGCAGAGCCAGCAAAGTTGCTCGAGAAGGACAGGTTTaGACTGTTCCAGCAGATTGTAGACAGAGTCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CRASKVAREGQV*TVPADCRQSQD Trigger: ATCTTGACTCTGTCTACAATCTGCTGGAACAGTGCAAACCTGTCCTTCTCGAGCAACTTTGCTGGCTCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR CCA 72 bp | CTCAAAGTCATAGCATTGAGCGTGCAGGGAAGGGTGTaGCCTACCATCCAAATCTATCTTAAAGGTTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LKVIALSVQGRV*PTIQIYLKGFH Trigger: GTGGAAACCTTTAAGATAGATTTGGATGGTAGGCCACACCCTTCCCTGCACGCTCAATGCTATGACTTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | CCCCCACACTGTACCCCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTCCCCAGGCTTTCGAATaGCCCCGAGATTCCGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPHCTPTSKPRASRNRSAPQAFE*PRDSAS Trigger: CGAGGCGGAATCTCGGGGCCATTCGAAAGCCTGGGG...AGCAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGGGGTACAGTGTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | GTCCCCCACACTGTACCCCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGTCCGGAGCCTCTTCCTaGGGACCTGGCTCAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VPHTVPLLPSPGPAGTDLSGASS*GPGSGS Trigger: GGATCCTGAGCCAGGTCCCCAGGAAGAGGCTCCGGA...CAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGGGGTACAGTGTGGGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR GCA 90 bp | CCTCAAATAGCCCTGCAGAAAACCTGGGCAAGGACCGTTGGTCATGAGTGGGGAGGGGTCCAGGGGGTCTaGTCGCACCGTGATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PQIALQKTWARTVGHEWGGVQGV*SHRDGD Trigger: GTCACCATCACGGTGCGAGCAGACCCCCTGGACCCC...TCCCCACTCATGACCAACGGTCCTTGCCCAGGTTTTCTGCAGGGCTATTTGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTTCGCCCGGGACAGCTCGCTTGCCTCCTGGAAAACGGAGCCTGGGGGACACCGTGATGGTGACTaGCTTTCGGATGTCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVFARDSSLASWKTEPGGHRDGD*LSDVQR Trigger: TCTCTGGACATCCGAAAGCCAGTCACCATCACGGTG...TCCCCCAGGCTCCGTTTTCCAGGAGGCAAGCGAGCTGTCCCGGGCGAAGACAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | CCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTTTCCTGGGTAGAGTTGCCAGGGTGGGAACCTaGTCCCGCAGGGCTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PTSKPRASRNRSAFLGRVARVGT*SRRARN Trigger: GTTCCTAGCCCTGCGGGACCAGGTTCCCACCCTGGC...AACTCTACCCAGGAAAGCAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR TCA 90 bp | GATCAAGTCTGCGAGCTTGTCTTCGCCCGGGACAGCTCGCTTGCCTCCTGGAAACCTCAGTGTCAGAACTaGCAGGTTTGGGGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DQVCELVFARDSSLASWKPQCQN*QVWGGR Trigger: CCTGCCACCCCAAACCTGTCAGTTCTGACACTGAGG...TTTCCAGGAGGCAAGCGAGCTGTCCCGGGCGAAGACAAGCTCGCAGACTTGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | GTCCTCAGATCATCCCCAGAGACAGCAGTGAGAGCAGCATCCTTTCCTAGCCTGCACCTTCAGAATCGCTaGGGCTCTCGGACCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRSSPETAVRAASFPSLHLQNR*GSRTRS Trigger: GCTCCGGGTCCGAGAGCCCCAGCGATTCTGAAGGTG...CAGGCTAGGAAAGGATGCTGCTCTCACTGCTGTCTCTGGGGATGATCTGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | CCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTTTCCTGGGTAGAGTTTCCGGAGCCTCTTCCTaGGGACCTGGCTCAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PTSKPRASRNRSAFLGRVSGASS*GPGSGS Trigger: GGATCCTGAGCCAGGTCCCCAGGAAGAGGCTCCGGA...AACTCTACCCAGGAAAGCAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR GCA 90 bp | CCCCCACACTGTACCCCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTTGCCGACACCGGAGCTaGCTTTTCTCTGTAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PPHCTPTSKPRASRNRSACRHRS*LFSVAI Trigger: AATGGCTACAGAGAAAAGGCAGCTCCGGTGTCGGCA...AGCAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGGGGTACAGTGTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | CCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTTTCCTGGGTAGAGTTTTGGGGTGGCAGGACTaGGGAGCCTCACTTCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: PTSKPRASRNRSAFLGRVLGWQD*GASLPT Trigger: TGTCGGAAGTGAGGCTCCCCAGTCCTGCCACCCCAA...AACTCTACCCAGGAAAGCAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCAGCAAAGTTGCTCGAGAAGGACAGGTTTGCACTGTTCCAGCAGATTGGCCAGGGTGGGAACCTaGTCCCGCAGGGCTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSQQSCSRRTGLHCSSRLARVGT*SRRARN Trigger: GTTCCTAGCCCTGCGGGACCAGGTTCCCACCCTGGC...CAATCTGCTGGAACAGTGCAAACCTGTCCTTCTCGAGCAACTTTGCTGGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGGCCAGGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGGGGGTCCAGGGGGTCTaGTCGCACCGTGATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRPGSNWRPSQLGANLEVGVQGV*SHRDGD Trigger: GTCACCATCACGGTGCGAGCAGACCCCCTGGACCCC...CACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCCTGGCCTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | CCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTTTCCTGGGTAGAGTTAGCAGGCCTGAGTCTTaGGCTCGCCCAGCTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: PTSKPRASRNRSAFLGRVSRPES*ARPADI Trigger: AATGTCAGCTGGGCGAGCCCAAGACTCAGGCCTGCT...AACTCTACCCAGGAAAGCAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR GCA 90 bp | GTCCTCAGATCATCCCCAGAGACAGCAGTGAGAGCAGCATCCTTTCCTAGCCTGTATGGAAGTGCTTCATaGAGGGGTCCAGGGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLRSSPETAVRAASFPSLYGSAS*RGPGGL Trigger: CAGACCCCCTGGACCCCTGCATGAAGCACTTCCATA...CAGGCTAGGAAAGGATGCTGCTCTCACTGCTGTCTCTGGGGATGATCTGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGGTAGCTGGTCCCCAGGCTTTCGAATaGCCCCGAGATTCCGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GSNWRPSQLGANLEVVAGPQAFE*PRDSAS Trigger: CGAGGCGGAATCTCGGGGCCATTCGAAAGCCTGGGG...ACCAGCTACCACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR TCA 90 bp | GTCCTCAGATCATCCCCAGAGACAGCAGTGAGAGCAGCATCCTTTCCTAGCCTGTCAGGATCCCCCTCTTaGGAGCAACTTTCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLRSSPETAVRAASFPSLSGSPS*EQLSGG Trigger: TCCTCCAGAAAGTTGCTCTCAAGAGGGGGATCCTGA...CAGGCTAGGAAAGGATGCTGCTCTCACTGCTGTCTCTGGGGATGATCTGAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | GTCCTCAGATCATCCCCAGAGACAGCAGTGAGAGCAGCATCCTTTCCTAGCCTGCCTCCTCTTTCTCCTTaGGAGCTTCTATCTCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLRSSPETAVRAASFPSLPPLSP*ELLSPE Trigger: CTCCGGAGATAGAAGCTCCCAAGGAGAAAGAGGAGG...CAGGCTAGGAAAGGATGCTGCTCTCACTGCTGTCTCTGGGGATGATCTGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | TTGATTCCACAGGGAGTTGCAGAACACAGCTGGAGCAAACTCTCCTTGTTGGCTTTGGGGTGGCAGGACTaGGGAGCCTCACTTCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: LIPQGVAEHSWSKLSLLALGWQD*GASLPT Trigger: TGTCGGAAGTGAGGCTCCCCAGTCCTGCCACCCCAA...AGCCAACAAGGAGAGTTTGCTCCAGCTGTGTTCTGCAACTCCCTGTGGAATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGCCAGCAAAGTTGCTCGAGAAGGACAGGTTTGCACTGTTCCAGCAGATTGTATGGAAGTGCTTCATaGAGGGGTCCAGGGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSQQSCSRRTGLHCSSRLYGSAS*RGPGGL Trigger: CAGACCCCCTGGACCCCTGCATGAAGCACTTCCATA...CAATCTGCTGGAACAGTGCAAACCTGTCCTTCTCGAGCAACTTTGCTGGCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR GCA 90 bp | GCCCTTTCTCAAAGTCATAGCATTGAGCGTGCAGGGAAGGGTGTGGCCTACCATGCCCCCACCAAAGCCTaGAAGTATTCTAACGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALSQSHSIERAGKGVAYHAPTKA*KYSNAL Trigger: CAAGGCGTTAGAATACTTGCAGGCTTTGGTGGGGGC...ATGGTAGGCCACACCCTTCCCTGCACGCTCAATGCTATGACTTTGAGAAAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR GCA 90 bp | GCCCTTTCTCAAAGTCATAGCATTGAGCGTGCAGGGAAGGGTGTGGCCTACCATTGCCGACACCGGAGCTaGCTTTTCTCTGTAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ALSQSHSIERAGKGVAYHCRHRS*LFSVAI Trigger: AATGGCTACAGAGAAAAGGCAGCTCCGGTGTCGGCA...ATGGTAGGCCACACCCTTCCCTGCACGCTCAATGCTATGACTTTGAGAAAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGGTGTGGCCTACCATCCAAATCTATCTTAAAGGTTTCCACTCCACAGCTACACCTTCAGAATCGCTaGGGCTCTCGGACCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGCGLPSKSILKVSTPQLHLQNR*GSRTRS Trigger: GCTCCGGGTCCGAGAGCCCCAGCGATTCTGAAGGTG...TAGCTGTGGAGTGGAAACCTTTAAGATAGATTTGGATGGTAGGCCACACCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR TCA 90 bp | GCCCTTTCTCAAAGTCATAGCATTGAGCGTGCAGGGAAGGGTGTGGCCTACCATTGCAGTCACGGCGAATaGTGGAAGCATAATTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSQSHSIERAGKGVAYHCSHGE*WKHNSC Trigger: GCAGGAATTATGCTTCCATCATTCGCCGTGACTGCA...ATGGTAGGCCACACCCTTCCCTGCACGCTCAATGCTATGACTTTGAGAAAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR GCA 90 bp | AGGTTCCAAGCTGGGCCTCAAATAGCCCTGCAGAAAACCTGGGCAAGGACCGTTTACGCGATTCTCTTTTaGAGTTGCTGTTGCCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RFQAGPQIALQKTWARTVYAILF*SCCCRH Trigger: GTGTCGGCAACAGCAACTGCAAAAGAGAATCGCGTA...AACGGTCCTTGCCCAGGTTTTCTGCAGGGCTATTTGAGGCCCAGCTTGGAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR GCA 90 bp | CCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTTTCCTGGGTAGAGTTTACGCGATTCTCTTTTaGAGTTGCTGTTGCCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PTSKPRASRNRSAFLGRVYAILF*SCCCRH Trigger: GTGTCGGCAACAGCAACTGCAAAAGAGAATCGCGTA...AACTCTACCCAGGAAAGCAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | ATTCCCATGAGTCGGTCGGGGAAGAGGGAGAATTGGGTTTCGAGGTTACCAAGACACCGTGATGGTGACTaGCTTTCGGATGTCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPMSRSGKRENWVSRLPRHRDGD*LSDVQR Trigger: TCTCTGGACATCCGAAAGCCAGTCACCATCACGGTG...TCTTGGTAACCTCGAAACCCAATTCTCCCTCTTCCCCGACCGACTCATGGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCAGCAAAGTTGCTCGAGAAGGACAGGTTTGCACTGTTCCAGCAGATTGTGCAGTCACGGCGAATaGTGGAAGCATAATTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSQQSCSRRTGLHCSSRLCSHGE*WKHNSC Trigger: GCAGGAATTATGCTTCCATCATTCGCCGTGACTGCA...CAATCTGCTGGAACAGTGCAAACCTGTCCTTCTCGAGCAACTTTGCTGGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGGCCAGGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGTCAGGATCCCCCTCTTaGGAGCAACTTTCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRPGSNWRPSQLGANLEVSGSPS*EQLSGG Trigger: TCCTCCAGAAAGTTGCTCTCAAGAGGGGGATCCTGA...CACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCCTGGCCTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGGCCAGGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGCCTCCTCTTTCTCCTTaGGAGCTTCTATCTCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRPGSNWRPSQLGANLEVPPLSP*ELLSPE Trigger: CTCCGGAGATAGAAGCTCCCAAGGAGAAAGAGGAGG...CACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCCTGGCCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| 3UTR CAA 72 bp | TACATAGAGGCCAAGCCCTTTCTCAAAGTCATAGCATaGAGCGTGCAGGGAAGGGTGTGGCCTACCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YIEAKPFLKVIA*SVQGRVWPTIQ Trigger: TTGGATGGTAGGCCACACCCTTCCCTGCACGCTCAATGCTATGACTTTGAGAAAGGGCTTGGCCTCTATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | GTCCCCCACACTGTACCCCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTCGCCCAGCTGACATaGGGTGGCGGGCGCCGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VPHTVPLLPSPGPAGTDLLAQLT*GGGRRV Trigger: AACCCGGCGCCCGCCACCCAATGTCAGCTGGGCGAG...CAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGGGGTACAGTGTGGGGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | GATCAAGTCTGCGAGCTTGTCTTCGCCCGGGACAGCTCGCTTGCCTCCTGGAAACTCGCCCAGCTGACATaGGGTGGCGGGCGCCGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DQVCELVFARDSSLASWKLAQLT*GGGRRV Trigger: AACCCGGCGCCCGCCACCCAATGTCAGCTGGGCGAG...TTTCCAGGAGGCAAGCGAGCTGTCCCGGGCGAAGACAAGCTCGCAGACTTGATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTTCGCCCGGGACAGCTCGCTTGCCTCCTGGAAAACGGAGCCTGGGGGATCAGAACTGACAGGTTaGGGGTGGCAGGACTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LVFARDSSLASWKTEPGGSELTG*GWQDWG Trigger: TCCCCAGTCCTGCCACCCCAAACCTGTCAGTTCTGA...TCCCCCAGGCTCCGTTTTCCAGGAGGCAAGCGAGCTGTCCCGGGCGAAGACAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTTCGCCCGGGACAGCTCGCTTGCCTCCTGGAAAACGGAGCCTGGGGGACTCAGGATCCCCCTCTaGAGAGCAACTTTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVFARDSSLASWKTEPGGLRIPL*RATFWR Trigger: CCTCCAGAAAGTTGCTCTCAAGAGGGGGATCCTGAG...TCCCCCAGGCTCCGTTTTCCAGGAGGCAAGCGAGCTGTCCCGGGCGAAGACAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | GATCAAGTCTGCGAGCTTGTCTTCGCCCGGGACAGCTCGCTTGCCTCCTGGAAATCCTCCTCTTTCTCCTaGGGAGCTTCTATCTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: DQVCELVFARDSSLASWKSSSFS*GASISG Trigger: TCCGGAGATAGAAGCTCCCAAGGAGAAAGAGGAGGA...TTTCCAGGAGGCAAGCGAGCTGTCCCGGGCGAAGACAAGCTCGCAGACTTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | CCTACTTCCAAGCCCAGGGCCAGCAGGAACAGATCTGCTTTCCTGGGTAGAGTTCTGAGGATCACGACTTaGGGGGCCTTAGAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTSKPRASRNRSAFLGRVLRITT*GALEQL Trigger: CAGCTGCTCTAAGGCCCCCAAAGTCGTGATCCTCAG...AACTCTACCCAGGAAAGCAGATCTGTTCCTGCTGGCCCTGGGCTTGGAAGTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | GCCCTTTCTCAAAGTCATAGCATTGAGCGTGCAGGGAAGGGTGTGGCCTACCATTCAGAACTGACAGGTTaGGGGTGGCAGGACTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALSQSHSIERAGKGVAYHSELTG*GWQDWG Trigger: TCCCCAGTCCTGCCACCCCAAACCTGTCAGTTCTGA...ATGGTAGGCCACACCCTTCCCTGCACGCTCAATGCTATGACTTTGAGAAAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | TTGAGGCCAGGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGCTGAGGATCACGACTTaGGGGGCCTTAGAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRPGSNWRPSQLGANLEVLRITT*GALEQL Trigger: CAGCTGCTCTAAGGCCCCCAAAGTCGTGATCCTCAG...CACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCCTGGCCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTCCAAGCTGGGCCTCAAATAGCCCTGCAGAAAACCTGGGCAAGGACCGTTGTACGCGATTCTCTTTaGCAGTTGCTGTTGCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: RFQAGPQIALQKTWARTVVRDSL*QLLLPT Trigger: TGTCGGCAACAGCAACTGCAAAAGAGAATCGCGTAC...AACGGTCCTTGCCCAGGTTTTCTGCAGGGCTATTTGAGGCCCAGCTTGGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | TTGAGGCCAGGAAGTAATTGGAGGCCATCACAGTTGGGAGCCAATTTGGAAGTGCTCAGGATCCCCCTCTaGAGAGCAACTTTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRPGSNWRPSQLGANLEVLRIPL*RATFWR Trigger: CCTCCAGAAAGTTGCTCTCAAGAGGGGGATCCTGAG...CACTTCCAAATTGGCTCCCAACTGTGATGGCCTCCAATTACTTCCTGGCCTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGCCAGCAAAGTTGCTCGAGAAGGACAGGTTTGCACTGTTCCAGCAGATTGTTATGGTTCTTCCTCTaGGTCACGTCCTCAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QSQQSCSRRTGLHCSSRLLWFFL*VTSSVS Trigger: TGACACTGAGGACGTGACCAAGAGGAAGAACCATAA...CAATCTGCTGGAACAGTGCAAACCTGTCCTTCTCGAGCAACTTTGCTGGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | TTGATTCCACAGGGAGTTGCAGAACACAGCTGGAGCAAACTCTCCTTGTTGGCTGTACGCGATTCTCTTTaGCAGTTGCTGTTGCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: LIPQGVAEHSWSKLSLLAVRDSL*QLLLPT Trigger: TGTCGGCAACAGCAACTGCAAAAGAGAATCGCGTAC...AGCCAACAAGGAGAGTTTGCTCCAGCTGTGTTCTGCAACTCCCTGTGGAATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGTGGCCTACCATCCAAATCTATCTTAAAGGTTTCCACTCCACAGCTACTGTTATGGTTCTTCCTCTaGGTCACGTCCTCAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GCGLPSKSILKVSTPQLLLWFFL*VTSSVS Trigger: TGACACTGAGGACGTGACCAAGAGGAAGAACCATAA...CAGTAGCTGTGGAGTGGAAACCTTTAAGATAGATTTGGATGGTAGGCCACACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||
| CDS CCA 72 bp | TCCAGGCCACGGCTCCCCGGGATTAATCCCAGAGGCTaGGTCCACGGCGCCGGGACCGGAGCCCCAGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRPRLPGINPRG*VHGAGTGAPGR Trigger: CCGCCCTGGGGCTCCGGTCCCGGCGCCGTGGACCCAGCCTCTGGGATTAATCCCGGGGAGCCGTGGCCTGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 ENSMUST00000144998.2 |
||
| CDS CCA 72 bp | GGGGTCCAGGGGGTCTGCTCGCACCGTGATGGTGACTaGCTTTCGGATGTCCAGAGATCGCCTCTTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GVQGVCSHRDGD*LSDVQRSPLLH Trigger: GTGGAGAAGAGGCGATCTCTGGACATCCGAAAGCCAGTCACCATCACGGTGCGAGCAGACCCCCTGGACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030407.8 ENSMUST00000106252.9 |
||