Pregenerated sensors for MYCBPAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039110Ensembl transcript IDs: ENSMUST00000040692.9, ENSMUST00000093945.10, ENSMUST00000239238.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGCTCTGGCGTGGAGATGCCCCTCAGTAAGTCCTGCAGCACGCTCTaGGCAATGGTGATGGCCTCGTGGGCAGCCAGCTTTGTCTCGCAC | + |
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Preference number: 5 (lower is better) Translates to: RSGVEMPLSKSCSTL*AMVMASWAASFVSH Trigger: GTGCGAGACAAAGCTGGCTGCCCACGAGGCCATCACCATTGCCCAGAGCGTGCTGCAGGACTTACTGAGGGGCATCTCCACGCCAGAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040692.9 |
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| CDS CCA 90 bp | CGCTCTGGCGTGGAGATGCCCCTCAGTAAGTCCTGCAGCACGCTCTaGGCAATGGTGATGGCCTCGTGGGCAGCCAGCTTTGTCTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: RSGVEMPLSKSCSTL*AMVMASWAASFVSN Trigger: GTTGGAGACAAAGCTGGCTGCCCACGAGGCCATCACCATTGCCCAGAGCGTGCTGCAGGACTTACTGAGGGGCATCTCCACGCCAGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 90 bp | CTCAGTAAGTCCTGCAGCACGCTCTGGGCAATGGTGATGGCCTCGTaGGCAGCCAGCTTTGTCTCGCACTCCCCTGGGAGCTGCTTATGG | + |
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Preference number: 5 (lower is better) Translates to: LSKSCSTLWAMVMAS*AASFVSHSPGSCLW Trigger: CCATAAGCAGCTCCCAGGGGAGTGCGAGACAAAGCTGGCTGCCCACGAGGCCATCACCATTGCCCAGAGCGTGCTGCAGGACTTACTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040692.9 |
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| CDS TCA 90 bp | GCAACGCATAGACCTCAGCGTGCAACCGCTGGGTATATTTCTCCATaGCCAGGGGGTCTATGGGCTCCTGGGAGGGTGCCGTGCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: ATHRPQRATAGYISP*PGGLWAPGRVPCCQ Trigger: CTGACAGCACGGCACCCTCCCAGGAGCCCATAGACCCCCTGGTCATGGAGAAATATACCCAGCGGTTGCACGCTGAGGTCTATGCGTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 90 bp | AACCGCTGGGTATATTTCTCCATGACCAGGGGGTCTATGGGCTCCTaGGAGGGTGCCGTGCTGTCAGGGGGAGGATCTTCTGAGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: NRWVYFSMTRGSMGS*EGAVLSGGGSSESS Trigger: GCTGCTCTCAGAAGATCCTCCCCCTGACAGCACGGCACCCTCCCAGGAGCCCATAGACCCCCTGGTCATGGAGAAATATACCCAGCGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 90 bp | TATGGGCTCCTGGGAGGGTGCCGTGCTGTCAGGGGGAGGATCTTCTaGGAGCAGCCTGTCCCGGCTTGCAGACTTTACCACTTTCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: YGLLGGCRAVRGRIF*EQPVPACRLYHFLV Trigger: GACAAGAAAGTGGTAAAGTCTGCAAGCCGGGACAGGCTGCTCTCAGAAGATCCTCCCCCTGACAGCACGGCACCCTCCCAGGAGCCCATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 90 bp | CACAGGGACTGGCTTACCAGGCTGTCAATCACGTCTCGCCACAGCTaGAGACACATCTGGTATAGGAGGTCCGACTGCAGTGGCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: HRDWLTRLSITSRHS*RHIWYRRSDCSGFC Trigger: GCAGAAGCCACTGCAGTCGGACCTCCTATACCAGATGTGTCTGCAGCTGTGGCGAGACGTGATTGACAGCCTGGTAAGCCAGTCCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 90 bp | GGGGCCGCCTTCGCCAGTTGTACCAAATGGCCACCGTGCCGTTATTaGCCACAGTCAGTTCTGAGGACGTTCTCTCCCCTTCAAGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: GAAFASCTKWPPCRY*PQSVLRTFSPLQGF Trigger: AAACCCTTGAAGGGGAGAGAACGTCCTCAGAACTGACTGTGGTCAATAACGGCACGGTGGCCATTTGGTACAACTGGCGAAGGCGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 90 bp | ACCAACAGTAACGGCACTGGAGTTCTGAGGCTGGGGGTTTCCTTCTaGGTTGCCTTGGCCTTCCTGTACTGTTGCCACAGCTGGTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: TNSNGTGVLRLGVSF*VALAFLYCCHSWCK Trigger: CTTGCACCAGCTGTGGCAACAGTACAGGAAGGCCAAGGCAACCCAGAAGGAAACCCCCAGCCTCAGAACTCCAGTGCCGTTACTGTTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 90 bp | AGCTCCATTGCCGCCTTATTGAGCTGGATGAGGGCATCCTCTCTCTaGAGCTCCTCGGGGAAGGTCATCACTGCCTGTCTGAAGTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SSIAALLSWMRASSL*SSSGKVITACLKSS Trigger: AGAGGACTTCAGACAGGCAGTGATGACCTTCCCCGAGGAGCTCCAGAGAGAGGATGCCCTCATCCAGCTCAATAAGGCGGCAATGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 90 bp | GTCTCCTTCTCAGGCAGGCCCAGAAGATTTCTTAGCCACAGGGACTaGCTTACCAGGCTGTCAATCACGTCTCGCCACAGCTGCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: VSFSGRPRRFLSHRD*LTRLSITSRHSCRH Trigger: GTGTCTGCAGCTGTGGCGAGACGTGATTGACAGCCTGGTAAGCCAGTCCCTGTGGCTAAGAAATCTTCTGGGCCTGCCTGAGAAGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 90 bp | AGACACATCTGGTATAGGAGGTCCGACTGCAGTGGCTTCTGCTCCTaGCACAGCTCCATTGCCGCCTTATTGAGCTGGATGAGGGCATCC | + |
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Preference number: 5 (lower is better) Translates to: RHIWYRRSDCSGFCS*HSSIAALLSWMRAS Trigger: GGATGCCCTCATCCAGCTCAATAAGGCGGCAATGGAGCTGTGTCAGGAGCAGAAGCCACTGCAGTCGGACCTCCTATACCAGATGTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 90 bp | CGGTATGCATCAACAGCTCACTGGCTGGCTTCTTCAGGTGCTTGCTaGGAGCTTCCTGTTGCTTCTTCCGCAAGGCAATGTGCCGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RYASTAHWLASSGAC*ELPVASSARQCAVS Trigger: GGAGACGGCACATTGCCTTGCGGAAGAAGCAACAGGAAGCTCTCAGCAAGCACCTGAAGAAGCCAGCCAGTGAGCTGTTGATGCATACCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 90 bp | AACTGGTTGCTTTTCCGTCATGCTGGGTGGGAAGTGCACGGTCAATaGCCTCGCGCTCCTCCTGGATCTTCCTATAGCTCTCCCCGGTAT | + |
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Preference number: 5 (lower is better) Translates to: NWLLFRHAGWEVHGQ*PRAPPGSSYSSPRY Trigger: ATACCGGGGAGAGCTATAGGAAGATCCAGGAGGAGCGCGAGGTCATTGACCGTGCACTTCCCACCCAGCATGACGGAAAAGCAACCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 90 bp | GGACACCAATTCCGATGTTTTTCTTGTCCTCTGGGTTACTGCCTCTaGCCCAGCAAGCTGGCTTCCCACAGAACAGCAGCGAAGGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: GHQFRCFSCPLGYCL*PSKLASHRTAAKGR Trigger: TCGGCCCTTCGCTGCTGTTCTGTGGGAAGCCAGCTTGCTGGGTCAGAGGCAGTAACCCAGAGGACAAGAAAAACATCGGAATTGGTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 90 bp | TCCATAAAAATGTCCTGGGTCAGTGAGATGGCATGGAGGGTGACCTaGAGGACAGCACCTCCCAGGAGTGTAGGGTGGGTCCCAAACTCC | + |
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Preference number: 5 (lower is better) Translates to: SIKMSWVSEMAWRVT*RTAPPRSVGWVPNS Trigger: GGAGTTTGGGACCCACCCTACACTCCTGGGAGGTGCTGTCCTTCAGGTCACCCTCCATGCCATCTCACTGACCCAGGACATTTTTATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 90 bp | AGTCCTGGAGACTTCCCAAGATCTGGTGAGGGAGGATCTGGCCACTaGTTAAGAAGCTGTCATGAGGACCGGAGTAGTCCAGAGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SPGDFPRSGEGGSGH*LRSCHEDRSSPEAW Trigger: CCAAGCCTCTGGACTACTCCGGTCCTCATGACAGCTTCTTAAGCAGTGGCCAGATCCTCCCTCACCAGATCTTGGGAAGTCTCCAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 90 bp | CTCTCCCCGGTATGCATCAACAGCTCACTGGCTGGCTTCTTCAGGTaGTTGCTGAGAGCTTCCTGTTGCTTCTTCCGCAAGGCAATGTGC | + |
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Preference number: 5 (lower is better) Translates to: LSPVCINSSLAGFFR*LLRASCCFFRKAMC Trigger: GCACATTGCCTTGCGGAAGAAGCAACAGGAAGCTCTCAGCAAGCACCTGAAGAAGCCAGCCAGTGAGCTGTTGATGCATACCGGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 90 bp | GCTGTCATGAGGACCGGAGTAGTCCAGAGGCTTGGTGGCGGCATCTaGAGTAGCAGGATGTGCTACCAAGTGGTAGACCCTTTTGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: AVMRTGVVQRLGGGI*SSRMCYQVVDPFAR Trigger: TCTAGCAAAAGGGTCTACCACTTGGTAGCACATCCTGCTACTCCAGATGCCGCCACCAAGCCTCTGGACTACTCCGGTCCTCATGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 90 bp | GATGTTTTTCTTGTCCTCTGGGTTACTGCCTCTGACCCAGCAAGCTaGCTTCCCACAGAACAGCAGCGAAGGGCCGAGAATAGGCATGGG | + |
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Preference number: 5 (lower is better) Translates to: DVFLVLWVTASDPAS*LPTEQQRRAENRHG Trigger: CCCATGCCTATTCTCGGCCCTTCGCTGCTGTTCTGTGGGAAGCCAGCTTGCTGGGTCAGAGGCAGTAACCCAGAGGACAAGAAAAACATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 90 bp | ACTCCAGAACCAACTGGTTGCTTTTCCGTCATGCTGGGTGGGAAGTaGACGGTCAATGACCTCGCGCTCCTCCTGGATCTTCCTATAGCT | + |
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Preference number: 5 (lower is better) Translates to: TPEPTGCFSVMLGGK*TVNDLALLLDLPIA Trigger: AGCTATAGGAAGATCCAGGAGGAGCGCGAGGTCATTGACCGTGCACTTCCCACCCAGCATGACGGAAAAGCAACCAGTTGGTTCTGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 90 bp | GGGCTGTTCAGGTGCCTTCGCCCGCTTCTTTTCTTTGACGCTCTCTaGGTTCTCCAGGATCTTGCTGGTTGGCATTTTGAGACGGGATTC | + |
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Preference number: 5 (lower is better) Translates to: GLFRCLRPLLFFDAL*VLQDLAGWHFETGF Trigger: GAATCCCGTCTCAAAATGCCAACCAGCAAGATCCTGGAGAACGCAGAGAGCGTCAAAGAAAAGAAGCGGGCGAAGGCACCTGAACAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239238.2 |
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| CDS CCA 90 bp | GGTGGCAAATGTTCTTCCACTGTGACAGATGAGAAGGGCTTCCCATaGCCCACCACCTCCAGGCCATCAATATCCTGCTGGCTGAAATCC | + |
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Preference number: 5 (lower is better) Translates to: GGKCSSTVTDEKGFP*PTTSRPSISCWLKS Trigger: GGATTTCAGCCAGCAGGATATTGATGGCCTGGAGGTGGTGGGCCATGGGAAGCCCTTCTCATCTGTCACAGTGGAAGAACATTTGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 90 bp | AGGAGCTCTTCTGGATCTTTTCAGGTGGCAAATGTTCTTCCACTGTaGCAGATGAGAAGGGCTTCCCATGGCCCACCACCTCCAGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RSSSGSFQVANVLPL*QMRRASHGPPPPGH Trigger: ATGGCCTGGAGGTGGTGGGCCATGGGAAGCCCTTCTCATCTGTCACAGTGGAAGAACATTTGCCACCTGAAAAGATCCAGAAGAGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 90 bp | GGAGTAGTCCAGAGGCTTGGTGGCGGCATCTGGAGTAGCAGGATGTaGTACCAAGTGGTAGACCCTTTTGCTAGAGTCTTTCGGTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: GVVQRLGGGIWSSRM*YQVVDPFARVFRFE Trigger: CTCAAACCGAAAGACTCTAGCAAAAGGGTCTACCACTTGGTAGCACATCCTGCTACTCCAGATGCCGCCACCAAGCCTCTGGACTACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 90 bp | AGCTCACTGGCTGGCTTCTTCAGGTGCTTGCTGAGAGCTTCCTGTTaGTTCTTCCGCAAGGCAATGTGCCGTCTCCAGTTCTTTAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SSLAGFFRCLLRASC*FFRKAMCRLQFFRK Trigger: CTTCCTAAAGAACTGGAGACGGCACATTGCCTTGCGGAAGAAGCAACAGGAAGCTCTCAGCAAGCACCTGAAGAAGCCAGCCAGTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 90 bp | GATCTTCCTATAGCTCTCCCCGGTATGCATCAACAGCTCACTGGCTaGCTTCTTCAGGTGCTTGCTGAGAGCTTCCTGTTGCTTCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: DLPIALPGMHQQLTG*LLQVLAESFLLLLP Trigger: CGGAAGAAGCAACAGGAAGCTCTCAGCAAGCACCTGAAGAAGCCAGCCAGTGAGCTGTTGATGCATACCGGGGAGAGCTATAGGAAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 90 bp | GTTGTACCAAATGGCCACCGTGCCGTTATTGACCACAGTCAGTTCTaGGGACGTTCTCTCCCCTTCAAGGGTTTCAAATGTCAGGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: VVPNGHRAVIDHSQF*GRSLPFKGFKCQAD Trigger: GTCCGCCTGACATTTGAAACCCTTGAAGGGGAGAGAACGTCCTCAGAACTGACTGTGGTCAATAACGGCACGGTGGCCATTTGGTACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 90 bp | GTCCGGACCCTCCTCCACCAGCAGTTCCTCCATAATGCTCTTCCGTaGCACACTCTTCTTTCCTATGCTAGACTTCAGAGACAGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: VRTLLHQQFLHNALP*HTLLSYARLQRQEE Trigger: TTCTTCCTGTCTCTGAAGTCTAGCATAGGAAAGAAGAGTGTGGCACGGAAGAGCATTATGGAGGAACTGCTGGTGGAGGAGGGTCCGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 90 bp | CTTCTGGATCTTTTCAGGTGGCAAATGTTCTTCCACTGTGACAGATaGGAAGGGCTTCCCATGGCCCACCACCTCCAGGCCATCAATATC | + |
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Preference number: 5 (lower is better) Translates to: LLDLFRWQMFFHCDR*EGLPMAHHLQAINI Trigger: GATATTGATGGCCTGGAGGTGGTGGGCCATGGGAAGCCCTTCTCATCTGTCACAGTGGAAGAACATTTGCCACCTGAAAAGATCCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 90 bp | TTTGGTCATGAGAAGACCTGTCATCTCATCACCCAGGTATTCCAGTaGACTCCAGAACCAACTGGTTGCTTTTCCGTCATGCTGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: FGHEKTCHLITQVFQ*TPEPTGCFSVMLGG Trigger: CCCACCCAGCATGACGGAAAAGCAACCAGTTGGTTCTGGAGTCCACTGGAATACCTGGGTGATGAGATGACAGGTCTTCTCATGACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 90 bp | CACCTTCGACTCTGTGACTGGAGGGGATTTTTGACCTTGTTCATCTaGAAGATCCAAATAAACCGTCTCCTTCTCAGGCAGGCCCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: HLRLCDWRGFLTLFI*KIQINRLLLRQAQK Trigger: CTTCTGGGCCTGCCTGAGAAGGAGACGGTTTATTTGGATCTTCCAGATGAACAAGGTCAAAAATCCCCTCCAGTCACAGAGTCGAAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 72 bp | CGTCCACCGGGGATGGTGTGCGCTCTGGCGTGGAGATaGCCCTCAGTAAGTCCTGCAGCACGCTCTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: RPPGMVCALAWR*PSVSPAARSGQ Trigger: TTGCCCAGAGCGTGCTGCAGGACTTACTGAGGGGCATCTCCACGCCAGAGCGCACACCATCCCCGGTGGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 72 bp | GTGCGCTCTGGCGTGGAGATGCCCCTCAGTAAGTCCTaGAGCACGCTCTGGGCAATGGTGATGGCCTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: VRSGVEMPLSKS*STLWAMVMASW Trigger: CCACGAGGCCATCACCATTGCCCAGAGCGTGCTGCAGGACTTACTGAGGGGCATCTCCACGCCAGAGCGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 72 bp | CTGGGAGGGTGCCGTGCTGTCAGGGGGAGGATCTTCTaGGAGCAGCCTGTCCCGGCTTGCAGACTTTACCAC | + |
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Preference number: 6 (lower is better) Translates to: LGGCRAVRGRIF*EQPVPACRLYH Trigger: GTGGTAAAGTCTGCAAGCCGGGACAGGCTGCTCTCAGAAGATCCTCCCCCTGACAGCACGGCACCCTCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 72 bp | AGACCTCAGCGTGCAACCGCTGGGTATATTTCTCCATaGCCAGGGGGTCTATGGGCTCCTGGGAGGGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RPQRATAGYISP*PGGLWAPGRVP Trigger: CGGCACCCTCCCAGGAGCCCATAGACCCCCTGGTCATGGAGAAATATACCCAGCGGTTGCACGCTGAGGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | GGCCTCGTGGGCAGCCAGCTTTGTCTCGCACTCCCCTaGGAGCTGCTTATGGTGAAGGGTAGTAAGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GLVGSQLCLALP*ELLMVKGSKAG Trigger: ACCAGCCTTACTACCCTTCACCATAAGCAGCTCCCAGGGGAGTGCGAGACAAAGCTGGCTGCCCACGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040692.9 |
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| CDS TCA 72 bp | ATGTCCTGGGTCAGTGAGATGGCATGGAGGGTGACCTaGAGGACAGCACCTCCCAGGAGTGTAGGGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: MSWVSEMAWRVT*RTAPPRSVGWV Trigger: GACCCACCCTACACTCCTGGGAGGTGCTGTCCTTCAGGTCACCCTCCATGCCATCTCACTGACCCAGGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | GCCGCCTTATTGAGCTGGATGAGGGCATCCTCTCTCTaGAGCTCCTCGGGGAAGGTCATCACTGCCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: AALLSWMRASSL*SSSGKVITACL Trigger: CAGACAGGCAGTGATGACCTTCCCCGAGGAGCTCCAGAGAGAGGATGCCCTCATCCAGCTCAATAAGGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 72 bp | AGGCCTTCTCCACCAACAGTAACGGCACTGGAGTTCTaGGGCTGGGGGTTTCCTTCTGGGTTGCCTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RPSPPTVTALEF*GWGFPSGLPWP Trigger: AGGCCAAGGCAACCCAGAAGGAAACCCCCAGCCTCAGAACTCCAGTGCCGTTACTGTTGGTGGAGAAGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 72 bp | CACTGGAGTTCTGAGGCTGGGGGTTTCCTTCTGGGTTaGCTTGGCCTTCCTGTACTGTTGCCACAGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: HWSSEAGGFLLG*LGLPVLLPQLV Trigger: CACCAGCTGTGGCAACAGTACAGGAAGGCCAAGGCAACCCAGAAGGAAACCCCCAGCCTCAGAACTCCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | GCGGTGACAGCTGCGAGTACTCTGAGACCAGGTTCCTaGGGCTTATCGAACCTGAGGCCTTCTCCACCAACA | + |
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Preference number: 6 (lower is better) Translates to: AVTAASTLRPGS*GLSNLRPSPPT Trigger: TGTTGGTGGAGAAGGCCTCAGGTTCGATAAGCCCCAGGAACCTGGTCTCAGAGTACTCGCAGCTGTCACCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | GTATATTTCTCCATGACCAGGGGGTCTATGGGCTCCTaGGAGGGTGCCGTGCTGTCAGGGGGAGGATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VYFSMTRGSMGS*EGAVLSGGGSS Trigger: AGAAGATCCTCCCCCTGACAGCACGGCACCCTCCCAGGAGCCCATAGACCCCCTGGTCATGGAGAAATATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | AGGACCGGAGTAGTCCAGAGGCTTGGTGGCGGCATCTaGAGTAGCAGGATGTGCTACCAAGTGGTAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: RTGVVQRLGGGI*SSRMCYQVVDP Trigger: AGGGTCTACCACTTGGTAGCACATCCTGCTACTCCAGATGCCGCCACCAAGCCTCTGGACTACTCCGGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | CTTGTCCTCTGGGTTACTGCCTCTGACCCAGCAAGCTaGCTTCCCACAGAACAGCAGCGAAGGGCCGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: LVLWVTASDPAS*LPTEQQRRAEN Trigger: ATTCTCGGCCCTTCGCTGCTGTTCTGTGGGAAGCCAGCTTGCTGGGTCAGAGGCAGTAACCCAGAGGACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 90 bp | TGGGGCCGCCTTCGCCAGTTGTACCAAATGGCCACCGTGCCGTTATaGACCACAGTCAGTTCTGAGGACGTTCTCTCCCCTTCAAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: WGRLRQLYQMATVPL*TTVSSEDVLSPSRV Trigger: AACCCTTGAAGGGGAGAGAACGTCCTCAGAACTGACTGTGGTCAATAACGGCACGGTGGCCATTTGGTACAACTGGCGAAGGCGGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 72 bp | CCAACTGGTTGCTTTTCCGTCATGCTGGGTGGGAAGTaGACGGTCAATGACCTCGCGCTCCTCCTGGATCTT | + |
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Preference number: 6 (lower is better) Translates to: PTGCFSVMLGGK*TVNDLALLLDL Trigger: AAGATCCAGGAGGAGCGCGAGGTCATTGACCGTGCACTTCCCACCCAGCATGACGGAAAAGCAACCAGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | TCAGGCAGGCCCAGAAGATTTCTTAGCCACAGGGACTaGCTTACCAGGCTGTCAATCACGTCTCGCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: SGRPRRFLSHRD*LTRLSITSRHS Trigger: GCTGTGGCGAGACGTGATTGACAGCCTGGTAAGCCAGTCCCTGTGGCTAAGAAATCTTCTGGGCCTGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 90 bp | TCCCCGGTATGCATCAACAGCTCACTGGCTGGCTTCTTCAGGTGCTaGCTGAGAGCTTCCTGTTGCTTCTTCCGCAAGGCAATGTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: SPVCINSSLAGFFRC*LRASCCFFRKAMCR Trigger: ACGGCACATTGCCTTGCGGAAGAAGCAACAGGAAGCTCTCAGCAAGCACCTGAAGAAGCCAGCCAGTGAGCTGTTGATGCATACCGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 90 bp | AGCAGCGAAGGGCCGAGAATAGGCATGGGGACCATGTCGGAGAGGTaGGTCAAGGAGTCTAGAAATACCGTGTCTTCCGAGGAGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSEGPRIGMGTMSER*VKESRNTVSSEELF Trigger: GAAGAGCTCCTCGGAAGACACGGTATTTCTAGACTCCTTGACCAACCTCTCCGACATGGTCCCCATGCCTATTCTCGGCCCTTCGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 72 bp | TGGTATAGGAGGTCCGACTGCAGTGGCTTCTGCTCCTaGCACAGCTCCATTGCCGCCTTATTGAGCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: WYRRSDCSGFCS*HSSIAALLSWM Trigger: CATCCAGCTCAATAAGGCGGCAATGGAGCTGTGTCAGGAGCAGAAGCCACTGCAGTCGGACCTCCTATACCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 72 bp | CTTTTCCGTCATGCTGGGTGGGAAGTGCACGGTCAATaGCCTCGCGCTCCTCCTGGATCTTCCTATAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LFRHAGWEVHGQ*PRAPPGSSYSS Trigger: AGAGCTATAGGAAGATCCAGGAGGAGCGCGAGGTCATTGACCGTGCACTTCCCACCCAGCATGACGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 72 bp | CTTTTCAGGTGGCAAATGTTCTTCCACTGTGACAGATaGGAAGGGCTTCCCATGGCCCACCACCTCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LFRWQMFFHCDR*EGLPMAHHLQA Trigger: GGCCTGGAGGTGGTGGGCCATGGGAAGCCCTTCTCATCTGTCACAGTGGAAGAACATTTGCCACCTGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 72 bp | TGGGCTGTTCAGGTGCCTTCGCCCGCTTCTTTTCTTTaGCGCTCTCTGCGTTCTCCAGGATCTTGCTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: WAVQVPSPASFL*RSLRSPGSCWL Trigger: CAACCAGCAAGATCCTGGAGAACGCAGAGAGCGTCAAAGAAAAGAAGCGGGCGAAGGCACCTGAACAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239238.2 |
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| CDS GCA 72 bp | TGGCTTACCAGGCTGTCAATCACGTCTCGCCACAGCTaGAGACACATCTGGTATAGGAGGTCCGACTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: WLTRLSITSRHS*RHIWYRRSDCS Trigger: ACTGCAGTCGGACCTCCTATACCAGATGTGTCTGCAGCTGTGGCGAGACGTGATTGACAGCCTGGTAAGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 72 bp | GCTGGCTTCTTCAGGTGCTTGCTGAGAGCTTCCTGTTaGTTCTTCCGCAAGGCAATGTGCCGTCTCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AGFFRCLLRASC*FFRKAMCRLQF Trigger: GAACTGGAGACGGCACATTGCCTTGCGGAAGAAGCAACAGGAAGCTCTCAGCAAGCACCTGAAGAAGCCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | TGTTCTTCCACTGTGACAGATGAGAAGGGCTTCCCATaGCCCACCACCTCCAGGCCATCAATATCCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CSSTVTDEKGFP*PTTSRPSISCW Trigger: CCAGCAGGATATTGATGGCCTGGAGGTGGTGGGCCATGGGAAGCCCTTCTCATCTGTCACAGTGGAAGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 72 bp | GGCTGGCTTCTTCAGGTGCTTGCTGAGAGCTTCCTGTaGCTTCTTCCGCAAGGCAATGTGCCGTCTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: GWLLQVLAESFL*LLPQGNVPSPV Trigger: AACTGGAGACGGCACATTGCCTTGCGGAAGAAGCAACAGGAAGCTCTCAGCAAGCACCTGAAGAAGCCAGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 72 bp | CACCCAGGTATTCCAGTGGACTCCAGAACCAACTGGTaGCTTTTCCGTCATGCTGGGTGGGAAGTGCACGGT | + |
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Preference number: 6 (lower is better) Translates to: HPGIPVDSRTNW*LFRHAGWEVHG Trigger: ACCGTGCACTTCCCACCCAGCATGACGGAAAAGCAACCAGTTGGTTCTGGAGTCCACTGGAATACCTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 72 bp | GGGCCGAGAATAGGCATGGGGACCATGTCGGAGAGGTaGGTCAAGGAGTCTAGAAATACCGTGTCTTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GPRIGMGTMSER*VKESRNTVSSE Trigger: CTCGGAAGACACGGTATTTCTAGACTCCTTGACCAACCTCTCCGACATGGTCCCCATGCCTATTCTCGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 90 bp | GAGGCTGGGGGTTTCCTTCTGGGTTGCCTTGGCCTTCCTGTACTGTaGCCACAGCTGGTGCAAGTTTTGCACCACTTGATGCTGGTAATG | + |
|
Preference number: 6 (lower is better) Translates to: EAGGFLLGCLGLPVL*PQLVQVLHHLMLVM Trigger: CATTACCAGCATCAAGTGGTGCAAAACTTGCACCAGCTGTGGCAACAGTACAGGAAGGCCAAGGCAACCCAGAAGGAAACCCCCAGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | CATCACCCAGGTATTCCAGTGGACTCCAGAACCAACTaGTTGCTTTTCCGTCATGCTGGGTGGGAAGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HHPGIPVDSRTN*LLFRHAGWEVH Trigger: GTGCACTTCCCACCCAGCATGACGGAAAAGCAACCAGTTGGTTCTGGAGTCCACTGGAATACCTGGGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | CAAGCATCCTTCTGGGCTGGTAATCCAGTCTCCACTTaGATGGAGAGGGGCTTCCTGATGTGTGTGATGGGT | + |
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Preference number: 6 (lower is better) Translates to: QASFWAGNPVST*MERGFLMCVMG Trigger: ACCCATCACACACATCAGGAAGCCCCTCTCCATCCAAGTGGAGACTGGATTACCAGCCCAGAAGGATGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 72 bp | CTTCGCCAGTTGTACCAAATGGCCACCGTGCCGTTATaGACCACAGTCAGTTCTGAGGACGTTCTCTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRQLYQMATVPL*TTVSSEDVLSP Trigger: AGGGGAGAGAACGTCCTCAGAACTGACTGTGGTCAATAACGGCACGGTGGCCATTTGGTACAACTGGCGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 72 bp | TCAACAGCTCACTGGCTGGCTTCTTCAGGTGCTTGCTaGGAGCTTCCTGTTGCTTCTTCCGCAAGGCAATGT | + |
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Preference number: 6 (lower is better) Translates to: STAHWLASSGAC*ELPVASSARQC Trigger: ACATTGCCTTGCGGAAGAAGCAACAGGAAGCTCTCAGCAAGCACCTGAAGAAGCCAGCCAGTGAGCTGTTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 72 bp | TTCGCCAGTTGTACCAAATGGCCACCGTGCCGTTATTaGCCACAGTCAGTTCTGAGGACGTTCTCTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: FASCTKWPPCRY*PQSVLRTFSPL Trigger: AAGGGGAGAGAACGTCCTCAGAACTGACTGTGGTCAATAACGGCACGGTGGCCATTTGGTACAACTGGCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 72 bp | CAGAGGCTTGGTGGCGGCATCTGGAGTAGCAGGATGTaGTACCAAGTGGTAGACCCTTTTGCTAGAGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: QRLGGGIWSSRM*YQVVDPFARVF Trigger: AAAGACTCTAGCAAAAGGGTCTACCACTTGGTAGCACATCCTGCTACTCCAGATGCCGCCACCAAGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 72 bp | AGGTGCCTTCGCCCGCTTCTTTTCTTTGACGCTCTCTaGGTTCTCCAGGATCTTGCTGGTTGGCATTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: RCLRPLLFFDAL*VLQDLAGWHFE Trigger: CTCAAAATGCCAACCAGCAAGATCCTGGAGAACGCAGAGAGCGTCAAAGAAAAGAAGCGGGCGAAGGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239238.2 |
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| CDS CAA 90 bp | CCGTGCTGTCAGGGGGAGGATCTTCTGAGAGCAGCCTGTCCCGGCTaGCAGACTTTACCACTTTCTTGTCATCTTTTGGCTTCAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: PCCQGEDLLRAACPG*QTLPLSCHLLASVF Trigger: AAAAACTGAAGCCAAAAGATGACAAGAAAGTGGTAAAGTCTGCAAGCCGGGACAGGCTGCTCTCAGAAGATCCTCCCCCTGACAGCACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 90 bp | TCAAGGGTTTCAAATGTCAGGCGGACACCAATTCCGATGTTTTTCTaGTCCTCTGGGTTACTGCCTCTGACCCAGCAAGCTGGCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SRVSNVRRTPIPMFF*SSGLLPLTQQAGFP Trigger: TGGGAAGCCAGCTTGCTGGGTCAGAGGCAGTAACCCAGAGGACAAGAAAAACATCGGAATTGGTGTCCGCCTGACATTTGAAACCCTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 72 bp | TCTGGATCTTTTCAGGTGGCAAATGTTCTTCCACTGTaGCAGATGAGAAGGGCTTCCCATGGCCCACCACCT | + |
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Preference number: 6 (lower is better) Translates to: SGSFQVANVLPL*QMRRASHGPPP Trigger: AGGTGGTGGGCCATGGGAAGCCCTTCTCATCTGTCACAGTGGAAGAACATTTGCCACCTGAAAAGATCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 72 bp | TGTTCAGGTGCCTTCGCCCGCTTCTTTTCGAGCAACTaGAGCGGGGACTGCCTTTCAGTAATCTTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: CSGAFARFFSSN*SGDCLSVIFFI Trigger: GATGAAGAAGATTACTGAAAGGCAGTCCCCGCTCAAGTTGCTCGAAAAGAAGCGGGCGAAGGCACCTGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093945.10 |
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| CDS TCA 72 bp | AATGGCCACCGTGCCGTTATTGACCACAGTCAGTTCTaGGGACGTTCTCTCCCCTTCAAGGGTTTCAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: NGHRAVIDHSQF*GRSLPFKGFKC Trigger: ACATTTGAAACCCTTGAAGGGGAGAGAACGTCCTCAGAACTGACTGTGGTCAATAACGGCACGGTGGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS GCA 72 bp | CTCCTCCACCAGCAGTTCCTCCATAATGCTCTTCCGTaGCACACTCTTCTTTCCTATGCTAGACTTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLHQQFLHNALP*HTLLSYARLQR Trigger: TCTCTGAAGTCTAGCATAGGAAAGAAGAGTGTGGCACGGAAGAGCATTATGGAGGAACTGCTGGTGGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | CCCAGCTTTCCCACTTGTCACCTTCGACTCTGTGACTaGAGGGGATTTTTGACCTTGTTCATCTGGAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: PSFPTCHLRLCD*RGFLTLFIWKI Trigger: GATCTTCCAGATGAACAAGGTCAAAAATCCCCTCCAGTCACAGAGTCGAAGGTGACAAGTGGGAAAGCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CCA 72 bp | TTTGACGCTCTCTGCGTTCTCCAGGATCTTGCTGGTTaGCATTTTGAGACGGGATTCCTTCTTGATGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FDALCVLQDLAG*HFETGFLLDGL Trigger: AAGGCCATCAAGAAGGAATCCCGTCTCAAAATGCCAACCAGCAAGATCCTGGAGAACGCAGAGAGCGTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239238.2 |
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| CDS CAA 72 bp | TCAAATGTCAGGCGGACACCAATTCCGATGTTTTTCTaGTCCTCTGGGTTACTGCCTCTGACCCAGCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SNVRRTPIPMFF*SSGLLPLTQQA Trigger: AGCTTGCTGGGTCAGAGGCAGTAACCCAGAGGACAAGAAAAACATCGGAATTGGTGTCCGCCTGACATTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 90 bp | GGCCTTCCTGTACTGTTGCCACAGCTGGTGCAAGTTTTGCACCACTaGATGCTGGTAATGCAACCTAGGATTCCTGTAGTTGAACAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GLPVLLPQLVQVLHH*MLVMQPRIPVVEQV Trigger: GACTTGTTCAACTACAGGAATCCTAGGTTGCATTACCAGCATCAAGTGGTGCAAAACTTGCACCAGCTGTGGCAACAGTACAGGAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 90 bp | CCCACTTGTCACCTTCGACTCTGTGACTGGAGGGGATTTTTGACCTaGTTCATCTGGAAGATCCAAATAAACCGTCTCCTTCTCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PTCHLRLCDWRGFLT*FIWKIQINRLLLRQ Trigger: CTGCCTGAGAAGGAGACGGTTTATTTGGATCTTCCAGATGAACAAGGTCAAAAATCCCCTCCAGTCACAGAGTCGAAGGTGACAAGTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 90 bp | GTCCCAAACTCCCAAGATTCCCTGAAGATGCCAGCATTCAGAGACTaGAAGAAGAAGGTAAAGTGTTTGGTTTCCCCGGGCAGAATCACA | + |
|
Preference number: 6 (lower is better) Translates to: VPNSQDSLKMPAFRD*KKKVKCLVSPGRIT Trigger: TGTGATTCTGCCCGGGGAAACCAAACACTTTACCTTCTTCTTCAAGTCTCTGAATGCTGGCATCTTCAGGGAATCTTGGGAGTTTGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS TCA 72 bp | ATTCTTTTAAAGTCCTGGAGACTTCCCAAGATCTGGTaGGGGAGGATCTGGCCACTGCTTAAGAAGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ILLKSWRLPKIW*GRIWPLLKKLS Trigger: TGACAGCTTCTTAAGCAGTGGCCAGATCCTCCCTCACCAGATCTTGGGAAGTCTCCAGGACTTTAAAAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 72 bp | GTACTGTTGCCACAGCTGGTGCAAGTTTTGCACCACTaGATGCTGGTAATGCAACCTAGGATTCCTGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VLLPQLVQVLHH*MLVMQPRIPVV Trigger: AACTACAGGAATCCTAGGTTGCATTACCAGCATCAAGTGGTGCAAAACTTGCACCAGCTGTGGCAACAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 72 bp | TTCTTTTCTTTGACGCTCTCTGCGTTCTCCAGGATCTaGCTGGTTGGCATTTTGAGACGGGATTCCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FFSLTLSAFSRI*LVGILRRDSFL Trigger: CAAGAAGGAATCCCGTCTCAAAATGCCAACCAGCAAGATCCTGGAGAACGCAGAGAGCGTCAAAGAAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239238.2 |
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| CDS CAA 72 bp | CACCTTCGACTCTGTGACTGGAGGGGATTTTTGACCTaGTTCATCTGGAAGATCCAAATAAACCGTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HLRLCDWRGFLT*FIWKIQINRLL Trigger: AAGGAGACGGTTTATTTGGATCTTCCAGATGAACAAGGTCAAAAATCCCCTCCAGTCACAGAGTCGAAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040692.9 ENSMUST00000093945.10 ENSMUST00000239238.2 |
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| CDS CAA 90 bp | TGTGACCACAGGCTTTTCTCCTGTTTCTTCAAACTGAGGAACATGTaGCTTCCTCAAGTCTTCCTTTTTAATGGCCAAGGCAAGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: CDHRLFSCFFKLRNM*LPQVFLFNGQGKNV Trigger: GACATTCTTGCCTTGGCCATTAAAAAGGAAGACTTGAGGAAGCAACATGTTCCTCAGTTTGAAGAAACAGGAGAAAAGCCTGTGGTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093945.10 ENSMUST00000239238.2 |
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