Pregenerated sensors for MYBPHL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068745Ensembl transcript IDs: ENSMUST00000090563.7
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTTGAGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATACGCTGGGTCAGCAGCTaGTTCTACCTGCCGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LEDTVLSESGSQEALPQIRWVSS*FYLPLG Trigger: TCCCAGCGGCAGGTAGAAGCAGCTGCTGACCCAGCG...TATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CCA 90 bp | ACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTCTGAGAGGTCCCGCTaGGCAAACCCCTTGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TQSCQSQAPRRPFLRYPVSERSR*ANPLAL Trigger: CAAGGCCAAGGGGTTTGCCCAGCGGGACCTCTCAGA...GACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| 3UTR CAA 72 bp | AGGCCAAGCCAGCTAATGCTCCTTGAGGACACAGTCTaGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RPSQLMLLEDTV*SESGSQEALPQ Trigger: CTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAAGGAGCATTAGCTGGCTTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR TCA 90 bp | TTGAGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCTGCCGCTGGGAGCATaGGGCTATCTCCAGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LRTQSCQSQAPRRPFLRYLPLGA*GYLQCG Trigger: ACCACACTGGAGATAGCCTCATGCTCCCAGCGGCAG...ATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR TCA 90 bp | CACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTGAGTTGGTAGCATCCTaGGTCAGTGCGTTGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: HSLVRVRLPGGPSSDILSELVAS*VSALGL Trigger: GAGGCCCAACGCACTGACTCAGGATGCTACCAACTC...AGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR TCA 90 bp | TCCTTGAGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGACGATCACCAGGATATTaGTGGTGGCAGTGGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SLRTQSCQSQAPRRPFLRRSPGY*WWQWPA Trigger: TGCAGGCCACTGCCACCATCAATATCCTGGTGATCG...TCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR TCA 90 bp | CAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGGACAGGAGCAGATCCCCAGCTaGCTGAGGGCTCTGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: QSQAPRRPFLRYPVFLGQEQIPS*LRALYL Trigger: CAAGTACAGAGCCCTCAGTCAGCTGGGGATCTGCTC...CTGTCCTAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR TCA 90 bp | CTTGAGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATAAAACTTGGGAGCTTCTaGGAGGTCCCGCTGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LEDTVLSESGSQEALPQIKLGSF*EVPLGK Trigger: TTTGCCCAGCGGGACCTCTCAGAAGCTCCCAAGTTT...TATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR TCA 90 bp | CAGCTAATGCTCCTTGAGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCTGTTCTTTAGCCAGATaGTCTTGGGCCTGGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QLMLLEDTVLSESGSQEACSLAR*SWAWER Trigger: CCTCTCCCAGGCCCAAGATCATCTGGCTAAAGAACA...GGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAAGGAGCATTAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CCA 90 bp | CACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTACTCTGAGGAGGGCCTaGCTTCTCGATCACCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: HSLVRVRLPGGPSSDILSTLRRA*LLDHQD Trigger: ATCCTGGTGATCGAGAAGCCAGGCCCTCCTCAGAGT...AGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR GCA 90 bp | CAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGGACAGAGCCAGATCTTGGGGTaGTCTTCAATAGAGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QSQAPRRPFLRYPVFLGQSQILG*SSIEGR Trigger: CCTGCCCTCTATTGAAGAGCACCCCAAGATCTGGCT...CTGTCCTAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CCA 90 bp | CACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTGCTGCTTTCTGGATGTaGGCAAGGTCAGCTGTGACA | + |
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Preference number: 4 (lower is better) Translates to: HSLVRVRLPGGPSSDILSAAFWM*ARSAVT Trigger: TGTCACAGCTGACCTTGCCCACATCCAGAAAGCAGC...AGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CCA 90 bp | CAGCTAATGCTCCTTGAGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCACAGTAGCTGCTTTCTaGATGTGGGCAAGGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QLMLLEDTVLSESGSQEATVAAF*MWARSA Trigger: AGCTGACCTTGCCCACATCCAGAAAGCAGCTACTGT...GGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAAGGAGCATTAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CCA 90 bp | TTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGGCAGTCTGCCAGCGGCTaGGTAAACTTGGGAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LSESGSQEALPQISCLLRQSASG*VNLGAS Trigger: AGAAGCTCCCAAGTTTACCCAGCCGCTGGCAGACTG...CCTAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR TCA 90 bp | TCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGGACAACCAACTTAATACTCTaGGGAGGGCCTGGCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: SESGSQEALPQISCLLRTTNLIL*GGPGFS Trigger: CGAGAAGCCAGGCCCTCCTCAGAGTATTAAGTTGGT...TGTCCTAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR GCA 90 bp | TGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGGAGACTGTAGTGCAGTCTaGCAGCGGCTGGGTAAACTT | + |
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Preference number: 4 (lower is better) Translates to: CQSQAPRRPFLRYPVFLGDCSAV*QRLGKL Trigger: AAGTTTACCCAGCCGCTGGCAGACTGCACTACAGTC...TCCTAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR TCA 90 bp | TTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGGAACGCTCCAGGACTGTaGACCAGAGCCCAGATTTTT | + |
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Preference number: 4 (lower is better) Translates to: LSESGSQEALPQISCLLRNAPGL*TRAQIF Trigger: AAAAATCTGGGCTCTGGTTCACAGTCCTGGAGCGTT...CCTAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR GCA 90 bp | AGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTTTTTTGTCAGCCTTCTaGACCGTGTATCCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RTQSCQSQAPRRPFLRYPFLSAF*TVYPRR Trigger: TCTCCTGGGATACACGGTGCAGAAGGCTGACAAAAA...AGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR GCA 90 bp | TCCTTGAGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGACTTGTAAACAGTAGCTaGTTTCTGGATGTGGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: SLRTQSCQSQAPRRPFLRLVNSS*FLDVGK Trigger: CTTGCCCACATCCAGAAAGCAGCTACTGTTTACAAG...TCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGGACAGATTGCCCGTATCTTGTaGAGGTGTCCATTCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: QSQAPRRPFLRYPVFLGQIARIL*RCPFQS Trigger: ACTCTGGAATGGACACCTCCACAAGATACGGGCAAT...CTGTCCTAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS GCA 90 bp | GTCCGGGGTCCTTTAGCATCCGCTGGGTCAGCAGCTGCTTCTACCTaGCGCTGGGAGCATGAGGCTATCTCCAGTGTGGTGGCTGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: VRGPLASAGSAAAST*RWEHEAISSVVAVS Trigger: GGAGACAGCCACCACACTGGAGATAGCCTCATGCTCCCAGCGGCAGGTAGAAGCAGCTGCTGACCCAGCGGATGCTAAAGGACCCCGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS TCA 90 bp | AGAGGGCAGGAGCTGCAGAGAAGGGCTGCCTGCCTCCTGTTGATGTaGAGTCCGGGGTCCTTTAGCATCCGCTGGGTCAGCAGCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RGQELQRRAACLLLM*SPGSFSIRWVSSCF Trigger: GAAGCAGCTGCTGACCCAGCGGATGCTAAAGGACCCCGGACTTCACATCAACAGGAGGCAGGCAGCCCTTCTCTGCAGCTCCTGCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | ACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCCTGAGGGCTCTGTACTaGGGGTTGCCTTGGAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: TQSCQSQAPRRPFLRYPVLRALY*GLPWRS Trigger: GGACCTCCAAGGCAACCCCAAGTACAGAGCCCTCAG...GACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | CAGCTAATGCTCCTTGAGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCGTGAGTCCAGGTGGTTaGAGGTTTGGGCTTACCCTG | + |
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Preference number: 5 (lower is better) Translates to: QLMLLEDTVLSESGSQEAVSPGG*RFGLTL Trigger: CAGGGTAAGCCCAAACCTCAAACCACCTGGACTCAC...GGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAAGGAGCATTAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS CCA 90 bp | CTTCTGCACCGTGTATCCCAGGAGAGCTGTATTGCCCGTATCTTGTaGAGGTGTCCATTCCAGAGTAGCATTGGCGCCCCAAACGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: LLHRVSQESCIARIL*RCPFQSSIGAPNVH Trigger: GTGGACGTTTGGGGCGCCAATGCTACTCTGGAATGGACACCTCCACAAGATACGGGCAATACAGCTCTCCTGGGATACACGGTGCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | CAGCTAATGCTCCTTGAGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCGAGGTAGCCAGATCTaGGGGTGCTCTTCAATAGAG | + |
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Preference number: 5 (lower is better) Translates to: QLMLLEDTVLSESGSQEARGSQI*GCSSIE Trigger: CTCTATTGAAGAGCACCCCAAGATCTGGCTACCTCG...GGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAAGGAGCATTAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | TTGAGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCATTCCAGAGTAGCATaGGCGCCCCAAACGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: LRTQSCQSQAPRRPFLRYHSRVA*APQTST Trigger: GGTGGACGTTTGGGGCGCCAATGCTACTCTGGAATG...ATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | AGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTCCCAGGAGAGCTGTATaGCCCGTATCTTGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: RTQSCQSQAPRRPFLRYPPRRAV*PVSCGG Trigger: ACCTCCACAAGATACGGGCAATACAGCTCTCCTGGG...AGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | TCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGGACAAGCGGCTGGGTAAACTaGGGAGCTTCTGAGAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SESGSQEALPQISCLLRTSGWVN*GASERS Trigger: GGACCTCTCAGAAGCTCCCAAGTTTACCCAGCCGCT...TGTCCTAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | TCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGGACATTTAGCCAGATGATCTaGGGCCTGGGAGAGGCACGC | + |
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Preference number: 5 (lower is better) Translates to: SESGSQEALPQISCLLRTFSQMI*GLGEAR Trigger: GCGTGCCTCTCCCAGGCCCAAGATCATCTGGCTAAA...TGTCCTAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | TTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGGTCGAAGGGGCTAGGCTaGCGGATTTCTAGGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSESGSQEALPQISCLLRSKGLG*RISREQ Trigger: CTGCTCCCTAGAAATCCGCAAGCCTAGCCCCTTCGA...CCTAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | TCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGGACATCGATCACCAGGATATaGATGGTGGCAGTGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SESGSQEALPQISCLLRTSITRI*MVAVAC Trigger: GCAGGCCACTGCCACCATCAATATCCTGGTGATCGA...TGTCCTAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | CTTGAGGACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATACAGAGCCCAGATTTTTaGTCAGCCTTCTGCACCGTG | + |
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Preference number: 5 (lower is better) Translates to: LEDTVLSESGSQEALPQIQSPDF*SAFCTV Trigger: CACGGTGCAGAAGGCTGACAAAAAATCTGGGCTCTG...TATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGTCCTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS TCA 90 bp | TCCAGAGTAGCATTGGCGCCCCAAACGTCCACCAACTTAATACTCTaGGGAGGGCCTGGCTTCTCGATCACCAGGATATTGATGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: SRVALAPQTSTNLIL*GGPGFSITRILMVA Trigger: TGCCACCATCAATATCCTGGTGATCGAGAAGCCAGGCCCTCCTCAGAGTATTAAGTTGGTGGACGTTTGGGGCGCCAATGCTACTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | ACACAGTCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTGTATTGCCCGTATCTaGTGGAGGTGTCCATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: TQSCQSQAPRRPFLRYPVCIARI*WRCPFQ Trigger: CTGGAATGGACACCTCCACAAGATACGGGCAATACA...GACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGACTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | TCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTAGCTCTGTACTTGGGGTaGCCTTGGAGGTCCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: SCQSQAPRRPFLRYPVFLALYLG*PWRSIL Trigger: CAAGATGGACCTCCAAGGCAACCCCAAGTACAGAGC...TAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS-3UTR CAA 90 bp | TCTTGTCAGAGTCAGGCTCCCAGGAGGCCCTTCCTCAGATATCCTGTCTTCTTACCTTGGAGGTCCATCTaGTTCTTTAGCCAGATGATC | + |
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Preference number: 5 (lower is better) Translates to: SCQSQAPRRPFLRYPVFLPWRSI*FFSQMI Trigger: GATCATCTGGCTAAAGAACAAGATGGACCTCCAAGG...TAAGAAGACAGGATATCTGAGGAAGGGCCTCCTGGGAGCCTGACTCTGACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS CCA 72 bp | GCATCCGCTGGGTCAGCAGCTGCTTCTACCTGCCGCTaGGAGCATGAGGCTATCTCCAGTGTGGTGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ASAGSAAASTCR*EHEAISSVVAV Trigger: GACAGCCACCACACTGGAGATAGCCTCATGCTCCCAGCGGCAGGTAGAAGCAGCTGCTGACCCAGCGGATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS CAA 72 bp | GTGACTGTAGTGCAGTCTGCCAGCGGCTGGGTAAACTaGGGAGCTTCTGAGAGGTCCCGCTGGGCAAACCCC | + |
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Preference number: 6 (lower is better) Translates to: VTVVQSASGWVN*GASERSRWANP Trigger: GGGGTTTGCCCAGCGGGACCTCTCAGAAGCTCCCAAGTTTACCCAGCCGCTGGCAGACTGCACTACAGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS GCA 72 bp | CCTTTAGCATCCGCTGGGTCAGCAGCTGCTTCTACCTaGCGCTGGGAGCATGAGGCTATCTCCAGTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: PLASAGSAAAST*RWEHEAISSVV Trigger: CACCACACTGGAGATAGCCTCATGCTCCCAGCGGCAGGTAGAAGCAGCTGCTGACCCAGCGGATGCTAAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS GCA 72 bp | GTCTGCTTCAGGGCCCGAGGTAGCCAGATCTTGGGGTaGTCTTCAATAGAGGGCAGGAGCTGCAGAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: VCFRARGSQILG*SSIEGRSCREG Trigger: CCCTTCTCTGCAGCTCCTGCCCTCTATTGAAGAGCACCCCAAGATCTGGCTACCTCGGGCCCTGAAGCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS GCA 72 bp | CCGCTGGGCAAACCCCTTGGCCTTGTAAACAGTAGCTaGTTTCTGGATGTGGGCAAGGTCAGCTGTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: PLGKPLGLVNSS*FLDVGKVSCDR Trigger: CCTGTCACAGCTGACCTTGCCCACATCCAGAAAGCAGCTACTGTTTACAAGGCCAAGGGGTTTGCCCAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS CCA 72 bp | CGTGTATCCCAGGAGAGCTGTATTGCCCGTATCTTGTaGAGGTGTCCATTCCAGAGTAGCATTGGCGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: RVSQESCIARIL*RCPFQSSIGAP Trigger: TGGGGCGCCAATGCTACTCTGGAATGGACACCTCCACAAGATACGGGCAATACAGCTCTCCTGGGATACACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS CAA 72 bp | CACCGTGTATCCCAGGAGAGCTGTATTGCCCGTATCTaGTGGAGGTGTCCATTCCAGAGTAGCATTGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: HRVSQESCIARI*WRCPFQSSIGA Trigger: GGCGCCAATGCTACTCTGGAATGGACACCTCCACAAGATACGGGCAATACAGCTCTCCTGGGATACACGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS TCA 72 bp | CAGCCCACCGAGCTGCACACAGAGTTGGTAGCATCCTaGGTCAGTGCGTTGGGCCTCTCTGATGAAAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: QPTELHTELVAS*VSALGLSDEKN Trigger: ATTCTTTTCATCAGAGAGGCCCAACGCACTGACTCAGGATGCTACCAACTCTGTGTGCAGCTCGGTGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS CCA 72 bp | GGGCACAGCCATTGTGAGTCCAGGTGGTTTGAGGTTTaGGCTTACCCTGGATCGGGATTAGTAGATTCACTG | + |
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Preference number: 6 (lower is better) Translates to: GHSHCESRWFEV*AYPGSGLVDSL Trigger: CAGTGAATCTACTAATCCCGATCCAGGGTAAGCCCAAACCTCAAACCACCTGGACTCACAATGGCTGTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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| CDS CCA 72 bp | CCAAACGTCCACCAACTTAATACTCTGAGGAGGGCCTaGCTTCTCGATCACCAGGATATTGATGGTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: PNVHQLNTLRRA*LLDHQDIDGGS Trigger: ACTGCCACCATCAATATCCTGGTGATCGAGAAGCCAGGCCCTCCTCAGAGTATTAAGTTGGTGGACGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090563.7 |
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