RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYBPH (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042451

Ensembl transcript IDs: ENSMUST00000038445.13, ENSMUST00000191577.2

Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTaGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGC +
Preference number: 1 (lower is better)
Translates to: HTVYNSEEGASLCPF*ALLNPEGMAWGLPG
Trigger: GCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR TCA 90 bp AATGCTGTTTACAGTCACTCAGAGCCAAGCCCAGATGCTGACCTGTaGCCACCACCCAGAGTACCCATCCCTTCTGGACCTCCCCAGCAT +
Preference number: 1 (lower is better)
Translates to: NAVYSHSEPSPDADL*PPPRVPIPSGPPQH
Trigger: ATGCTGGGGAGGTCCAGAAGGGATGGGTACTCTGGGTGGTGGTCACAGGTCAGCATCTGGGCTTGGCTCTGAGTGACTGTAAACAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR GCA 90 bp AATACTTCTCATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTaGCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGC +
Preference number: 1 (lower is better)
Translates to: NTSHTVYNSEEGASL*PFWALLNPEGMAWG
Trigger: GCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR GCA 90 bp TCAGTCCTTCCTCAGGCTCAATTTCCAAAGCTGGGCTCTGCCCAGTaGAGCTCTGGAGACTTGATAGTTCACCCAGAGCCTCAGAACCAC +
Preference number: 1 (lower is better)
Translates to: SVLPQAQFPKLGSAQ*SSGDLIVHPEPQNH
Trigger: GTGGTTCTGAGGCTCTGGGTGAACTATCAAGTCTCCAGAGCTGCACTGGGCAGAGCCCAGCTTTGGAAATTGAGCCTGAGGAAGGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR CCA 90 bp TCCTCAGGCTCAATTTCCAAAGCTGGGCTCTGCCCAGTGCAGCTCTaGAGACTTGATAGTTCACCCAGAGCCTCAGAACCACCAAACGAG +
Preference number: 1 (lower is better)
Translates to: SSGSISKAGLCPVQL*RLDSSPRASEPPNE
Trigger: CTCGTTTGGTGGTTCTGAGGCTCTGGGTGAACTATCAAGTCTCCAGAGCTGCACTGGGCAGAGCCCAGCTTTGGAAATTGAGCCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR TCA 90 bp CTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAGAGGGATTCCTGGGGTCCTaGTCCTCAGGTCTGCAGGAC +
Preference number: 2 (lower is better)
Translates to: LILGLDPASDGGGLQVLEGFLGS*SSGLQD
Trigger: GTCCTGCAGACCTGAGGATCAGGACCCCAGGAATCC...CTCTAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR CAA 90 bp TACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTaGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCCTGATCCTG +
Preference number: 2 (lower is better)
Translates to: YNSEEGASLCPFWAL*NPEGMAWGLPGLIL
Trigger: CAGGATCAGGCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR-3UTR GCA 90 bp TGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCCCTGATCCTCAGGTCTaGAGGACTTGGTGGATAGTG +
Preference number: 2 (lower is better)
Translates to: CPFWALLNPEGMAWGLPGPDPQV*RTWWIV
Trigger: CACTATCCACCAAGTCCTGCAGACCTGAGGATCAGG...GCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR-3UTR CCA 90 bp GGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGTCTGCAGGACTTGGTaGATAGTGTCCTTCTGCGTC +
Preference number: 2 (lower is better)
Translates to: GASLCPFWALLNPEGMAWVCRTW*IVSFCV
Trigger: GACGCAGAAGGACACTATCCACCAAGTCCTGCAGAC...CCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR-3UTR TCA 90 bp AGAGATAGTGGGGAGTCGGGTAGAGAACCACCTCCACCCTTCTCAGTCCTTCCTGGATTCCTGGGGTCCTaGTCCTCAGGTCTGCAGGAC +
Preference number: 2 (lower is better)
Translates to: RDSGESGREPPPPFSVLPGFLGS*SSGLQD
Trigger: GTCCTGCAGACCTGAGGATCAGGACCCCAGGAATCC...AGGAAGGACTGAGAAGGGTGGAGGTGGTTCTCTACCCGACTCCCCACTATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR CCA 90 bp AACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTCTTGGGGATTCCTaGGGTCCTGATCCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: NSEEGASLCPFWALLNPEGLGDS*GPDPQV
Trigger: GACCTGAGGATCAGGACCCCAGGAATCCCCAAGACC...TTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR-3UTR CCA 90 bp GGCCTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTATTTATGCCTGGGAGGTaGATTCTTCTCTCGCAATCT +
Preference number: 2 (lower is better)
Translates to: GLILGLDPASDGGGLQVLFMPGR*ILLSQS
Trigger: AGATTGCGAGAGAAGAATCCACCTCCCAGGCATAAA...TAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR TCA 90 bp AACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAACTCAGTAGAGGTAACTaGAGGAGTAGGTCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: NSEEGASLCPFWALLNPELSRGN*RSRSSH
Trigger: GTGGCTGGACCTACTCCTTCAGTTACCTCTACTGAG...TTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR CCA 90 bp GTTCACCCAGAGCCTCAGAACCACCAAACGAGGAAGGGAGAGCAAGGACTGGGTGTCTGCAGGACTTGGTaGATAGTGTCCTTCTGCGTC +
Preference number: 2 (lower is better)
Translates to: VHPEPQNHQTRKGEQGLGVCRTW*IVSFCV
Trigger: GACGCAGAAGGACACTATCCACCAAGTCCTGCAGAC...ACCCAGTCCTTGCTCTCCCTTCCTCGTTTGGTGGTTCTGAGGCTCTGGGTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR CAA 90 bp GCTCAATTTCCAAAGCTGGGCTCTGCCCAGTGCAGCTCTGGAGACTaGATAGTTCACCCAGAGCCTCAGAACCACCAAACGAGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: AQFPKLGSAQCSSGD*IVHPEPQNHQTRKG
Trigger: TCCCTTCCTCGTTTGGTGGTTCTGAGGCTCTGGGTGAACTATCAAGTCTCCAGAGCTGCACTGGGCAGAGCCCAGCTTTGGAAATTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR TCA 90 bp TGCGTCCTGGTATGTGACCAAGCTGCTAGAAGAGATAGTGGGGAGTCGGGTAGACCTCCCTGTCTCCAGTaGCATTTTATGCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: CVLVCDQAARRDSGESGRPPCLQ*HFMPGR
Trigger: CCTCCCAGGCATAAAATGTCACTGGAGACAGGGAGG...TCTACCCGACTCCCCACTATCTCTTCTAGCAGCTTGGTCACATACCAGGACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR GCA 90 bp AACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAACCCAGCATGACCCAGTaGTACACTGTCTTCACCAAA +
Preference number: 2 (lower is better)
Translates to: NSEEGASLCPFWALLNPEPSMTQ*YTVFTK
Trigger: TTTGGTGAAGACAGTGTAGCACTGGGTCATGCTGGG...TTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR GCA 90 bp ATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTAATGGTACCCAGATCTaGCTACTGCTTTCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: IQCTTLKRVPVSAPSGPSNGTQI*LLLSCP
Trigger: AGGGCAGGAAAGCAGTAGGCAGATCTGGGTACCATT...AGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR GCA 90 bp TTGAATACTTCTCATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCCCTGATCCTCAGGTCTaGAGGACTTGGTGGATAGTG +
Preference number: 2 (lower is better)
Translates to: LNTSHTVYNSEEGASLCPPDPQV*RTWWIV
Trigger: CACTATCCACCAAGTCCTGCAGACCTGAGGATCAGG...GGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATTCAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR-3UTR GCA 90 bp GGGGATTCCTGGGGTCCTGATCCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCAATGAGGGAAAAGAATaGTGTTTACAGTCACTCAGA +
Preference number: 2 (lower is better)
Translates to: GDSWGPDPQVCRTWWIVSNEGKE*CLQSLR
Trigger: TCTGAGTGACTGTAAACAGCATTCTTTTCCCTCATT...GGACACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR CCA 90 bp CACCAAACGAGGAAGGGAGAGCAAGGACTGGGTCCCTACTTTCCTAATGAGGGACTTTTGCTACAAAAATaGTACCCAGATCTGCCTACT +
Preference number: 2 (lower is better)
Translates to: HQTRKGEQGLGPYFPNEGLLLQK*YPDLPT
Trigger: AGTAGGCAGATCTGGGTACCATTTTTGTAGCAAAAG...TCCCTCATTAGGAAAGTAGGGACCCAGTCCTTGCTCTCCCTTCCTCGTTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR GCA 90 bp GCATGCTCTCTGTCTTTTGCTACAAAAATGGTACCCAGATCTGCCTACTGCTTTTGGATAGTGTCCTTCTaGGTCCTGGTATGTGACCAA +
Preference number: 2 (lower is better)
Translates to: ACSLSFATKMVPRSAYCFWIVSF*VLVCDQ
Trigger: TTGGTCACATACCAGGACGCAGAAGGACACTATCCA...AAAGCAGTAGGCAGATCTGGGTACCATTTTTGTAGCAAAAGACAGAGAGCATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR GCA 90 bp TATTTGAATACTTCTCATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCTGGATAGTGTCCTTCTaGGTCCTGGTATGTGACCAA +
Preference number: 2 (lower is better)
Translates to: YLNTSHTVYNSEEGASLCWIVSF*VLVCDQ
Trigger: TTGGTCACATACCAGGACGCAGAAGGACACTATCCA...GCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATTCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR-3UTR GCA 90 bp TTGAATACTTCTCATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCCAAACTAAACATGCATaGTCTCTGTCTTTTGCTACA +
Preference number: 2 (lower is better)
Translates to: LNTSHTVYNSEEGASLCPQTKHA*SLSFAT
Trigger: TGTAGCAAAAGACAGAGAGCATGCATGTTTAGTTTG...GGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR GCA 90 bp TATTTGAATACTTCTCATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCATGCTCTCTGTCTTTTaGTACAAAAATGGTACCCAG +
Preference number: 2 (lower is better)
Translates to: YLNTSHTVYNSEEGASLCMLSVF*YKNGTQ
Trigger: CTGGGTACCATTTTTGTAGCAAAAGACAGAGAGCAT...GCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATTCAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR TCA 72 bp AAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTaGACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: KRVPVSAPSGPS*TQKVWPGACQA
Trigger: GGCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR-3UTR CAA 90 bp CTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAGAGGCTGTTCCTATGGTCTaGGGGATTCCTGGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: LILGLDPASDGGGLQVLEAVPMV*GIPGVL
Trigger: CAGGACCCCAGGAATCCCCAAGACCATAGGAACAGC...CTCTAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR-3UTR CAA 90 bp GGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGTCAGGTCTGCAGGACTaGGTGGATAGTGTCCTTCTG +
Preference number: 3 (lower is better)
Translates to: GASLCPFWALLNPEGMAWSGLQD*VDSVLL
Trigger: CAGAAGGACACTATCCACCAAGTCCTGCAGACCTGA...CCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR TCA 72 bp TACAGTCACTCAGAGCCAAGCCCAGATGCTGACCTGTaGCCACCACCCAGAGTACCCATCCCTTCTGGACCT +
Preference number: 3 (lower is better)
Translates to: YSHSEPSPDADL*PPPRVPIPSGP
Trigger: AGGTCCAGAAGGGATGGGTACTCTGGGTGGTGGTCACAGGTCAGCATCTGGGCTTGGCTCTGAGTGACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR TCA 72 bp TCGCTGTTCCTATGGTCTTGGGGATTCCTGGGGTCCTaGTCCTCAGGTCTGCAGGACTTGGTGGATAGTGTC +
Preference number: 3 (lower is better)
Translates to: SLFLWSWGFLGS*SSGLQDLVDSV
Trigger: GACACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATCCCCAAGACCATAGGAACAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR TCA 72 bp TGCTGTTTACAGTCACTCAGAGCCAAGCCCAGATGCTaGCCTGTGACCACCACCCAGAGTACCCATCCCTTC +
Preference number: 3 (lower is better)
Translates to: CCLQSLRAKPRC*PVTTTQSTHPF
Trigger: GAAGGGATGGGTACTCTGGGTGGTGGTCACAGGTCAGCATCTGGGCTTGGCTCTGAGTGACTGTAAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR GCA 72 bp CCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCTTCTaGGTCCTGGTATGTGACCAAGCTGTCTCCTTGTCC +
Preference number: 3 (lower is better)
Translates to: PQVCRTWWIVSF*VLVCDQAVSLS
Trigger: GGACAAGGAGACAGCTTGGTCACATACCAGGACGCAGAAGGACACTATCCACCAAGTCCTGCAGACCTGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038445.13
3UTR TCA 72 bp GACTTGGTGGATAGTGTCCTTCTGCGTCCTGGTATGTaGCCAAGCTGTCTCCTTGTCCCAGTCTCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: DLVDSVLLRPGM*PSCLLVPVSAS
Trigger: AGAGGCAGAGACTGGGACAAGGAGACAGCTTGGTCACATACCAGGACGCAGAAGGACACTATCCACCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038445.13
3UTR GCA 72 bp CATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTaGCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATG +
Preference number: 3 (lower is better)
Translates to: HTVYNSEEGASL*PFWALLNPEGM
Trigger: CATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR GCA 72 bp AGTCCTTCCTCAGGCTCAATTTCCAAAGCTGGGCTCTaGCCAGTGCAGCTCTGGAGACTTGATAGTTCACCC +
Preference number: 3 (lower is better)
Translates to: SPSSGSISKAGL*PVQLWRLDSSP
Trigger: GGGTGAACTATCAAGTCTCCAGAGCTGCACTGGGCAGAGCCCAGCTTTGGAAATTGAGCCTGAGGAAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR GCA 72 bp CCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCTTCTaGGTCCTGGTATGTGACCAAGCTGCTAGAAGAGAT +
Preference number: 3 (lower is better)
Translates to: PQVCRTWWIVSF*VLVCDQAARRD
Trigger: ATCTCTTCTAGCAGCTTGGTCACATACCAGGACGCAGAAGGACACTATCCACCAAGTCCTGCAGACCTGAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR GCA 72 bp TACCCATCCCTTCTGGACCTCCCCAGCATGACCCAGTaGTACACTGTCTTCACCAAACTAAACATGCATGCT +
Preference number: 3 (lower is better)
Translates to: YPSLLDLPSMTQ*YTVFTKLNMHA
Trigger: AGCATGCATGTTTAGTTTGGTGAAGACAGTGTAGCACTGGGTCATGCTGGGGAGGTCCAGAAGGGATGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR GCA 72 bp GGACTGGGTCCCTACTTTCCTAATGAGGGAAAAGAATaGTGTTTACAGTCACTCAGAGCCAAGCCCAGATGC +
Preference number: 3 (lower is better)
Translates to: GLGPYFPNEGKE*CLQSLRAKPRC
Trigger: GCATCTGGGCTTGGCTCTGAGTGACTGTAAACAGCATTCTTTTCCCTCATTAGGAAAGTAGGGACCCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR-3UTR CAA 90 bp AACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAACCACACACCTTTATTaGAATACTTCTCATACAGTG +
Preference number: 3 (lower is better)
Translates to: NSEEGASLCPFWALLNPETTHLY*NTSHTV
Trigger: CACTGTATGAGAAGTATTCAAATAAAGGTGTGTGGT...TTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR TCA 72 bp CCTTTATTTGAATACTTCTCATACAGTGTACAACTCTaGAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: PLFEYFSYSVQL*RGCQSLPLLGP
Trigger: AGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATTCAAATAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR-3UTR CAA 90 bp CACCAAACGAGGAAGGGAGAGCAAGGACTGGGTCCCTACTTTCCTAATGAGGGAACCACACACCTTTATTaGAATACTTCTCATACAGTG +
Preference number: 3 (lower is better)
Translates to: HQTRKGEQGLGPYFPNEGTTHLY*NTSHTV
Trigger: CACTGTATGAGAAGTATTCAAATAAAGGTGTGTGGT...TCCCTCATTAGGAAAGTAGGGACCCAGTCCTTGCTCTCCCTTCCTCGTTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
3UTR CCA 72 bp CTAAACATGCATGCTCTCTGTCTTTTGCTACAAAAATaGTACCCAGATCTGCCTACTGCTTTCCTGCCCTCC +
Preference number: 3 (lower is better)
Translates to: LNMHALCLLLQK*YPDLPTAFLPS
Trigger: GGAGGGCAGGAAAGCAGTAGGCAGATCTGGGTACCATTTTTGTAGCAAAAGACAGAGAGCATGCATGTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR GCA 90 bp TGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCAGGGTGCAGACCCCTTaGTCGGAGACGGCACGGTAC +
Preference number: 4 (lower is better)
Translates to: CPFWALLNPEGMAWGLPGRVQTP*SETARY
Trigger: GTACCGTGCCGTCTCCGAGCAAGGGGTCTGCACCCT...GCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp TGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCTGGTCAGCCAGGGGCTaGGTGAACGAGGGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: CPFWALLNPEGMAWGLPGWSARG*VNEGAS
Trigger: AGAAGCGCCCTCGTTCACCCAGCCCCTGGCTGACCA...GCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR CAA 72 bp GAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTaGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EEGASLCPFWAL*NPEGMAWGLPG
Trigger: GCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGAGGCTTCTGTGGCTCTaGAGCCTGCTCTTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LPLLGPLEPRRYGLGPARRLLWL*SLLLPG
Trigger: ACCGGGCAAGAGCAGGCTCCAGAGCCACAGAAGCCT...CCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp TGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCCTGATCCTGGCCGCAGTGGGGCACTaGGGACATCTTCACTCGGAG +
Preference number: 4 (lower is better)
Translates to: WALLNPEGMAWGLPGLILAAVGH*GHLHSE
Trigger: CTCCGAGTGAAGATGTCCCCAGTGCCCCACTGCGGC...CAGGATCAGGCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp TGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCTTTCGAACCGTCTGCTaGGTCACCATCACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: CPFWALLNPEGMAWGLPGFRTVC*VTITGR
Trigger: CCGGCCCGTGATGGTGACCCAGCAGACGGTTCGAAA...GCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp TGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCGCCAATGATGAGGTCTaGGATGGTGCAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CPFWALLNPEGMAWGLPGANDEV*DGAGGG
Trigger: CCCACCACCTGCACCATCTCAGACCTCATCATTGGC...GCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR GCA 90 bp CTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGTCTGGAGCCTGCTCTTaGCCGGTGGACTCTGATGCT +
Preference number: 4 (lower is better)
Translates to: LPLLGPLEPRRYGLGPARSGACS*PVDSDA
Trigger: AGCATCAGAGTCCACCGGGCAAGAGCAGGCTCCAGA...CCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGTGCCTGAGGCTTCTGTaGCTCTGGAGCCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPLLGPLEPRRYGLGPARCLRLL*LWSLLL
Trigger: CAAGAGCAGGCTCCAGAGCCACAGAAGCCTCAGGCA...CCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp GGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGTGGTCAGCCAGGGGCTaGGTGAACGAGGGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: GASLCPFWALLNPEGMAWWSARG*VNEGAS
Trigger: AGAAGCGCCCTCGTTCACCCAGCCCCTGGCTGACCA...CCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAGAGAGGCTTCTGTGGCTCTaGAGCCTGCTCTTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LILGLDPASDGGGLQVLERLLWL*SLLLPG
Trigger: ACCGGGCAAGAGCAGGCTCCAGAGCCACAGAAGCCT...CTCTAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGTGCTATAGCCAGGAGTaGAGGTATGGTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPLLGPLEPRRYGLGPARCYSQE*RYGQPG
Trigger: CCCTGGCTGACCATACCTCCACTCCTGGCTATAGCA...CCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp GGCCTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAGCTGAGCAGAGCGAATaGAGAGGATGGAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GLILGLDPASDGGGLQVLAEQSE*RGWSPG
Trigger: ACCAGGACTCCATCCTCTTCATTCGCTCTGCTCAGC...TAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp TGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCTGGTGGCTAAGTCACTaGGGCCACACAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: CPFWALLNPEGMAWGLPGWWLSH*GHTGFL
Trigger: CAGAAAACCTGTGTGGCCTCAGTGACTTAGCCACCA...GCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp AGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCTTTCGAACCGTCTGCTaGGTCACCATCACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RGCQSLPLLGPLEPRRYGFRTVC*VTITGR
Trigger: CCGGCCCGTGATGGTGACCCAGCAGACGGTTCGAAA...GCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGGTGATCTCTTGGATGTaGACAGGCTGGTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: LPLLGPLEPRRYGLGPARVISWM*TGWSRT
Trigger: CGTTCTGGACCAGCCTGTCCACATCCAAGAGATCAC...CCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCCAGGATGTCAATGCTaGCCTTGGCTTCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LPLLGPLEPRRYGLGPARPGCQC*PWLPSL
Trigger: AAGGCTTGGAAGCCAAGGCCAGCATTGACATCCTGG...CCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp AACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGCCTGTGTCCTGGGGTaGTGTCCACTCGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NSEEGASLCPFWALLNPEACVLG*CPLEGS
Trigger: GCTGCCCTCGAGTGGACACCACCCCAGGACACAGGC...TTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAGAGCTGAGATGGTGCAGGTaGTGGGGTGATAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LILGLDPASDGGGLQVLELRWCR*WGDSAP
Trigger: TGGAGCGCTATCACCCCACCACCTGCACCATCTCAG...CTCTAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp GGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGCAGAATCAAAGGGGCTaGGCTTCCGGATCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GASLCPFWALLNPEGMAWQNQRG*ASGSPG
Trigger: CCCTGGAGATCCGGAAGCCCAGCCCCTTTGATTCTG...CCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp TGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCCTGATCCTGTCTTGGGGGCTTCAGTaGTCTCTTGGATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: WALLNPEGMAWGLPGLILSWGLQ*SLGCGQ
Trigger: CTGTCCACATCCAAGAGATCACTGAAGCCCCCAAGA...CAGGATCAGGCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp GGGGATTCCTGGGGTCCTGATCCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCCCTGAGTCTGCGCGCTaGGCAGAGCGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GDSWGPDPQVCRTWWIVSPESAR*AERMKR
Trigger: CCTCTTCATTCGCTCTGCTCAGCGCGCAGACTCAGG...GGACACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp GGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGTGTGAGCCAGCTCCTTaGTGGTGGTGGCTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: GASLCPFWALLNPEGMAWCEPAP*WWWLSH
Trigger: GTGACTTAGCCACCACCACCAAGGAGCTGGCTCACA...CCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp GTTCACCCAGAGCCTCAGAACCACCAAACGAGGAAGGGAGAGCAAGGACTGGGTGCAGGATCCTGTGCCTaGGGCTTCTGTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VHPEPQNHQTRKGEQGLGAGSCA*GFCGSG
Trigger: TCCAGAGCCACAGAAGCCTCAGGCACAGGATCCTGC...ACCCAGTCCTTGCTCTCCCTTCCTCGTTTGGTGGTTCTGAGGCTCTGGGTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp AGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCGCTGAGCAGAGCGAATaGAGAGGATGGAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RGCQSLPLLGPLEPRRYGAEQSE*RGWSPG
Trigger: ACCAGGACTCCATCCTCTTCATTCGCTCTGCTCAGC...GCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR GCA 90 bp CCCCTCCCTGTCTCCAGTGACATTTTATGCCTGGGAGGTGGATTCTTCTCTCGCAGGGTGCAGACCCCTTaGTCGGAGACGGCACGGTAC +
Preference number: 4 (lower is better)
Translates to: PLPVSSDILCLGGGFFSRRVQTP*SETARY
Trigger: GTACCGTGCCGTCTCCGAGCAAGGGGTCTGCACCCT...GCGAGAGAAGAATCCACCTCCCAGGCATAAAATGTCACTGGAGACAGGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAGAGACAGTCAAGGAGCTGTaGCTCACATCCTCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LILGLDPASDGGGLQVLETVKEL*LTSSKV
Trigger: GACCTTGGAGGATGTGAGCCACAGCTCCTTGACTGT...CTCTAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp AGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCAAGAGGATGGAGTCCTaGTCCCCGCTGCGCACATTA +
Preference number: 4 (lower is better)
Translates to: RGCQSLPLLGPLEPRRYGKRMES*SPLRTL
Trigger: TAATGTGCGCAGCGGGGACCAGGACTCCATCCTCTT...GCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCGTGTTGCCTGTGTCCTaGGGTGGTGTCCACTCGAGG +
Preference number: 4 (lower is better)
Translates to: HTVYNSEEGASLCPFWALVLPVS*GGVHSR
Trigger: CCTCGAGTGGACACCACCCCAGGACACAGGCAACAC...GAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp AACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAAGGGGATTTGCAGGTTaGCTGACTCTCCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: NSEEGASLCPFWALLNPERGFAG*LTLPPG
Trigger: GCCAGGTGGGAGAGTCAGTCAACCTGCAAATCCCCT...TTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp GGCCTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAGCCACACAGGTTTTCTaGGAAGACCCGAAAAGAGTA +
Preference number: 4 (lower is better)
Translates to: GLILGLDPASDGGGLQVLATQVF*EDPKRV
Trigger: TACTCTTTTCGGGTCTTCTCAGAAAACCTGTGTGGC...TAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp GTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACTCTGCCTTGTGGATGTaGGCCAGCTCCTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VYNSEEGASLCPFWALLNSALWM*ASSLVV
Trigger: CACCACCAAGGAGCTGGCTCACATCCACAAGGCAGA...GTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR GCA 90 bp GTGTCCTTCTGCGTCCTGGTATGTGACCAAGCTGTCTCCTTGTCCCAGTCTCTGGGGCATGGCAGAAGCTaGAGGAGCTGCAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: VSFCVLVCDQAVSLSQSLGHGRS*RSCRIL
Trigger: CAGGATCCTGCAGCTCCTGCAGCTTCTGCCATGCCC...CAGAGACTGGGACAAGGAGACAGCTTGGTCACATACCAGGACGCAGAAGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038445.13
CDS-3UTR GCA 90 bp CTTGGGGATTCCTGGGGTCCTGATCCTCAGGTCTGCAGGACTTGGTGGATAGTGAGGTTTCGAACCGTCTaGTGGGTCACCATCACGGGC +
Preference number: 4 (lower is better)
Translates to: LGDSWGPDPQVCRTWWIVRFRTV*WVTITG
Trigger: GCCCGTGATGGTGACCCAGCAGACGGTTCGAAACCT...CACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp TCCTTCTGCGTCCTGGTATGTGACCAAGCTGCTAGAAGAGATAGTGGGGAGTCGCCTGAGTCTGCGCGCTaGGCAGAGCGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SFCVLVCDQAARRDSGESPESAR*AERMKR
Trigger: CCTCTTCATTCGCTCTGCTCAGCGCGCAGACTCAGG...CGACTCCCCACTATCTCTTCTAGCAGCTTGGTCACATACCAGGACGCAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp CCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCTTCTGCGTCCTGGTATGTGACGCCAATGATGAGGTCTaGGATGGTGCAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PQVCRTWWIVSFCVLVCDANDEV*DGAGGG
Trigger: CCCACCACCTGCACCATCTCAGACCTCATCATTGGC...GTCACATACCAGGACGCAGAAGGACACTATCCACCAAGTCCTGCAGACCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CCCCTCCCTGTCTCCAGTGACATTTTATGCCTGGGAGGTGGATTCTTCTCTCGCTGCCTGAGGCTTCTGTaGCTCTGGAGCCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PLPVSSDILCLGGGFFSRCLRLL*LWSLLL
Trigger: CAAGAGCAGGCTCCAGAGCCACAGAAGCCTCAGGCA...GCGAGAGAAGAATCCACCTCCCAGGCATAAAATGTCACTGGAGACAGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp TCAGTAGAGGTAACTGAAGGAGTAGGTCCAGCCACTCACCTGTCTCCTTGTCCCCAAGGTCAGCCGCAGTaGGGCACTGGGGACATCTTC +
Preference number: 4 (lower is better)
Translates to: SVEVTEGVGPATHLSPCPQGQPQ*GTGDIF
Trigger: GAAGATGTCCCCAGTGCCCCACTGCGGCTGACCTTG...GGGACAAGGAGACAGGTGAGTGGCTGGACCTACTCCTTCAGTTACCTCTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp GATTCCTGGGGTCCTGATCCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCTTCGGCTTGGGCTTCCCCTaGAAGGGGATTTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: DSWGPDPQVCRTWWIVSFGLGFP*KGICRL
Trigger: CAACCTGCAAATCCCCTTCCAGGGGAAGCCCAAGCC...GAAGGACACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCTTCTGCGTCCTGGTATGTGACAAGAGACCTGTGGCTTaGGCTTCCCCTGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PQVCRTWWIVSFCVLVCDKRPVA*ASPGRG
Trigger: TCCCCTTCCAGGGGAAGCCCAAGCCACAGGTCTCTT...GTCACATACCAGGACGCAGAAGGACACTATCCACCAAGTCCTGCAGACCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp GTGTCCTTCTGCGTCCTGGTATGTGACCAAGCTGTCTCCTTGTCCCAGTCTCTGCTGAGATGGTGCAGGTaGTGGGGTGATAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VSFCVLVCDQAVSLSQSLLRWCR*WGDSAP
Trigger: TGGAGCGCTATCACCCCACCACCTGCACCATCTCAG...CAGAGACTGGGACAAGGAGACAGCTTGGTCACATACCAGGACGCAGAAGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038445.13
CDS-3UTR CCA 90 bp GTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACTGTGAGCCAGCTCCTTaGTGGTGGTGGCTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: VYNSEEGASLCPFWALLNCEPAP*WWWLSH
Trigger: GTGACTTAGCCACCACCACCAAGGAGCTGGCTCACA...GTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
3UTR CAA 72 bp CCAAAGCTGGGCTCTGCCCAGTGCAGCTCTGGAGACTaGATAGTTCACCCAGAGCCTCAGAACCACCAAACG +
Preference number: 4 (lower is better)
Translates to: PKLGSAQCSSGD*IVHPEPQNHQT
Trigger: CGTTTGGTGGTTCTGAGGCTCTGGGTGAACTATCAAGTCTCCAGAGCTGCACTGGGCAGAGCCCAGCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp CTTGGGGATTCCTGGGGTCCTGATCCTCAGGTCTGCAGGACTTGGTGGATAGTGTGGTGGCTAAGTCACTaGGGCCACACAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LGDSWGPDPQVCRTWWIVWWLSH*GHTGFL
Trigger: CAGAAAACCTGTGTGGCCTCAGTGACTTAGCCACCA...CACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp TCCTTCTGCGTCCTGGTATGTGACCAAGCTGCTAGAAGAGATAGTGGGGAGTCGTCTGCCTTGTGGATGTaGGCCAGCTCCTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SFCVLVCDQAARRDSGESSALWM*ASSLVV
Trigger: CACCACCAAGGAGCTGGCTCACATCCACAAGGCAGA...CGACTCCCCACTATCTCTTCTAGCAGCTTGGTCACATACCAGGACGCAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp GGGGATTCCTGGGGTCCTGATCCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCGAACGAGGGCGCTTCTaGGAAGTCTCGCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: GDSWGPDPQVCRTWWIVSERGRF*EVSLNK
Trigger: TTTATTGAGCGAGACTTCTCAGAAGCGCCCTCGTTC...GGACACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp GTTCACCCAGAGCCTCAGAACCACCAAACGAGGAAGGGAGAGCAAGGACTGGGTACAGTCAAGGAGCTGTaGCTCACATCCTCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: VHPEPQNHQTRKGEQGLGTVKEL*LTSSKV
Trigger: GACCTTGGAGGATGTGAGCCACAGCTCCTTGACTGT...ACCCAGTCCTTGCTCTCCCTTCCTCGTTTGGTGGTTCTGAGGCTCTGGGTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp GGGGATTCCTGGGGTCCTGATCCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCTGTCAATGCTGGCCTTaGCTTCCAAGCCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: GDSWGPDPQVCRTWWIVSCQCWP*LPSLPD
Trigger: ATCTGGAAGGCTTGGAAGCCAAGGCCAGCATTGACA...GGACACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp ATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTAGATGGTGCAGGTGGTaGGGTGATAGCGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: IQCTTLKRVPVSAPSGPSRWCRW*GDSAPT
Trigger: TGTTGGAGCGCTATCACCCCACCACCTGCACCATCT...AGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp GATTCCTGGGGTCCTGATCCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCTTCAGATGGTGCAGGTGGTaGGGTGATAGCGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: DSWGPDPQVCRTWWIVSFRWCRW*GDSAPT
Trigger: TGTTGGAGCGCTATCACCCCACCACCTGCACCATCT...GAAGGACACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp GAAGAGATAGTGGGGAGTCGGGTAGAGAACCACCTCCACCCTTCTCAGTCCTTCTCTTGGGGGCTTCAGTaGTCTCTTGGATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: EEIVGSRVENHLHPSQSFSWGLQ*SLGCGQ
Trigger: CTGTCCACATCCAAGAGATCACTGAAGCCCCCAAGA...GAAGGACTGAGAAGGGTGGAGGTGGTTCTCTACCCGACTCCCCACTATCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR GCA 90 bp GGGAAAAGAATGCTGTTTACAGTCACTCAGAGCCAAGCCCAGATGCTGACCTGTGGGCATGGCAGAAGCTaGAGGAGCTGCAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: GKRMLFTVTQSQAQMLTCGHGRS*RSCRIL
Trigger: CAGGATCCTGCAGCTCCTGCAGCTTCTGCCATGCCC...ACAGGTCAGCATCTGGGCTTGGCTCTGAGTGACTGTAAACAGCATTCTTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR GCA 90 bp CTTGGGGATTCCTGGGGTCCTGATCCTCAGGTCTGCAGGACTTGGTGGATAGTGCCCTGTCCTTTTGTCTaGCTTCTGTACTGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LGDSWGPDPQVCRTWWIVPCPFV*LLYCVA
Trigger: GGCTACACAGTACAGAAGGCAGACAAAAGGACAGGG...CACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp GAAGAGATAGTGGGGAGTCGGGTAGAGAACCACCTCCACCCTTCTCAGTCCTTCGTGATCTCTTGGATGTaGACAGGCTGGTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: EEIVGSRVENHLHPSQSFVISWM*TGWSRT
Trigger: CGTTCTGGACCAGCCTGTCCACATCCAAGAGATCAC...GAAGGACTGAGAAGGGTGGAGGTGGTTCTCTACCCGACTCCCCACTATCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp ACGAGGAAGGGAGAGCAAGGACTGGGTCCCTACTTTCCTAATGAGGGAAAAGAAGTGTTGCCTGTGTCCTaGGGTGGTGTCCACTCGAGG +
Preference number: 4 (lower is better)
Translates to: TRKGEQGLGPYFPNEGKEVLPVS*GGVHSR
Trigger: CCTCGAGTGGACACCACCCCAGGACACAGGCAACAC...TTCTTTTCCCTCATTAGGAAAGTAGGGACCCAGTCCTTGCTCTCCCTTCCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp TTGAATACTTCTCATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCGCAGGATCCTGTGCCTaGGGCTTCTGTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LNTSHTVYNSEEGASLCPAGSCA*GFCGSG
Trigger: TCCAGAGCCACAGAAGCCTCAGGCACAGGATCCTGC...GGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp CCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCTTCTGCGTCCTGGTATGTGACGAACGAGGGCGCTTCTaGGAAGTCTCGCTCAATAAA +
Preference number: 4 (lower is better)
Translates to: PQVCRTWWIVSFCVLVCDERGRF*EVSLNK
Trigger: TTTATTGAGCGAGACTTCTCAGAAGCGCCCTCGTTC...GTCACATACCAGGACGCAGAAGGACACTATCCACCAAGTCCTGCAGACCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp TTGAATACTTCTCATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCCAAGGTCAGCCGCAGTaGGGCACTGGGGACATCTTC +
Preference number: 4 (lower is better)
Translates to: LNTSHTVYNSEEGASLCPQGQPQ*GTGDIF
Trigger: GAAGATGTCCCCAGTGCCCCACTGCGGCTGACCTTG...GGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR GCA 90 bp TTGAATACTTCTCATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCAGGTTTCGAACCGTCTaGTGGGTCACCATCACGGGC +
Preference number: 4 (lower is better)
Translates to: LNTSHTVYNSEEGASLCPRFRTV*WVTITG
Trigger: GCCCGTGATGGTGACCCAGCAGACGGTTCGAAACCT...GGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp TATTTGAATACTTCTCATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCGCCTGTGTCCTGGGGTaGTGTCCACTCGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: YLNTSHTVYNSEEGASLCACVLG*CPLEGS
Trigger: GCTGCCCTCGAGTGGACACCACCCCAGGACACAGGC...GCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATTCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR GCA 90 bp CAGCTCTGGAGACTTGATAGTTCACCCAGAGCCTCAGAACCACCAAACGAGGAACCCTGTCCTTTTGTCTaGCTTCTGTACTGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: QLWRLDSSPRASEPPNEEPCPFV*LLYCVA
Trigger: GGCTACACAGTACAGAAGGCAGACAAAAGGACAGGG...TTCCTCGTTTGGTGGTTCTGAGGCTCTGGGTGAACTATCAAGTCTCCAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp GCATGCTCTCTGTCTTTTGCTACAAAAATGGTACCCAGATCTGCCTACTGCTTTGGCTTGGGCTTCCCCTaGAAGGGGATTTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ACSLSFATKMVPRSAYCFGLGFP*KGICRL
Trigger: CAACCTGCAAATCCCCTTCCAGGGGAAGCCCAAGCC...AAAGCAGTAGGCAGATCTGGGTACCATTTTTGTAGCAAAAGACAGAGAGCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp ACTTTCCTAATGAGGGAAAAGAATGCTGTTTACAGTCACTCAGAGCCAAGCCCAAAGAGACCTGTGGCTTaGGCTTCCCCTGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: TFLMREKNAVYSHSEPSPKRPVA*ASPGRG
Trigger: TCCCCTTCCAGGGGAAGCCCAAGCCACAGGTCTCTT...TGGGCTTGGCTCTGAGTGACTGTAAACAGCATTCTTTTCCCTCATTAGGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CATGCTCTCTGTCTTTTGCTACAAAAATGGTACCCAGATCTGCCTACTGCTTTCCAGAATCAAAGGGGCTaGGCTTCCGGATCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HALCLLLQKWYPDLPTAFQNQRG*ASGSPG
Trigger: CCCTGGAGATCCGGAAGCCCAGCCCCTTTGATTCTG...GAAAGCAGTAGGCAGATCTGGGTACCATTTTTGTAGCAAAAGACAGAGAGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp ACTTTCCTAATGAGGGAAAAGAATGCTGTTTACAGTCACTCAGAGCCAAGCCCAAAGAGGATGGAGTCCTaGTCCCCGCTGCGCACATTA +
Preference number: 4 (lower is better)
Translates to: TFLMREKNAVYSHSEPSPKRMES*SPLRTL
Trigger: TAATGTGCGCAGCGGGGACCAGGACTCCATCCTCTT...TGGGCTTGGCTCTGAGTGACTGTAAACAGCATTCTTTTCCCTCATTAGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp ACTTTCCTAATGAGGGAAAAGAATGCTGTTTACAGTCACTCAGAGCCAAGCCCATGCTATAGCCAGGAGTaGAGGTATGGTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TFLMREKNAVYSHSEPSPCYSQE*RYGQPG
Trigger: CCCTGGCTGACCATACCTCCACTCCTGGCTATAGCA...TGGGCTTGGCTCTGAGTGACTGTAAACAGCATTCTTTTCCCTCATTAGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR TCA 90 bp TTGAATACTTCTCATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCGCCACACAGGTTTTCTaGGAAGACCCGAAAAGAGTA +
Preference number: 4 (lower is better)
Translates to: LNTSHTVYNSEEGASLCPATQVF*EDPKRV
Trigger: TACTCTTTTCGGGTCTTCTCAGAAAACCTGTGTGGC...GGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp CATGCTCTCTGTCTTTTGCTACAAAAATGGTACCCAGATCTGCCTACTGCTTTCTGTCAATGCTGGCCTTaGCTTCCAAGCCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: HALCLLLQKWYPDLPTAFCQCWP*LPSLPD
Trigger: ATCTGGAAGGCTTGGAAGCCAAGGCCAGCATTGACA...GAAAGCAGTAGGCAGATCTGGGTACCATTTTTGTAGCAAAAGACAGAGAGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CCA 90 bp AACATGCATGCTCTCTGTCTTTTGCTACAAAAATGGTACCCAGATCTGCCTACTCCAGGATGTCAATGCTaGCCTTGGCTTCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: NMHALCLLLQKWYPDLPTPGCQC*PWLPSL
Trigger: AAGGCTTGGAAGCCAAGGCCAGCATTGACATCCTGG...AGTAGGCAGATCTGGGTACCATTTTTGTAGCAAAAGACAGAGAGCATGCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp CTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCAGACATCCAGTAGCTaGATGCTGCTCGGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: LPLLGPLEPRRYGLGPARQTSSS*MLLGGP
Trigger: CGGGCCCCCGAGCAGCATCAAGCTACTGGATGTCTG...CCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp AGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCAGGGTGCAGACCCCTaGCTCGGAGACGGCACGGTA +
Preference number: 5 (lower is better)
Translates to: RGCQSLPLLGPLEPRRYGQGADP*LGDGTV
Trigger: TACCGTGCCGTCTCCGAGCAAGGGGTCTGCACCCTG...GCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS TCA 90 bp CTGAGGCTTCTGTGGCTCTGGAGCCTGCTCTTGCCCGGTGGACTCTaGTGCTGCCACCTCTCCAGAAGGCTCTGTAGTGGGCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: LRLLWLWSLLLPGGL*CCHLSRRLCSGHLG
Trigger: GCCAAGGTGCCCACTACAGAGCCTTCTGGAGAGGTGGCAGCATCAGAGTCCACCGGGCAAGAGCAGGCTCCAGAGCCACAGAAGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS TCA 90 bp GATGTGGACAGGCTGGTCCAGAACGGCTGGAGGGCCTGCCCCTGCTaGGCTTACTGCAGTCACACGCAGGAAGAACTTGTCTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: DVDRLVQNGWRACPC*AYCSHTQEELVSQG
Trigger: GCCCTGGGAGACAAGTTCTTCCTGCGTGTGACTGCAGTAAGCTCAGCAGGGGCAGGCCCTCCAGCCGTTCTGGACCAGCCTGTCCACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp CTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGAAGGGGATTTGCAGGTaGACTGACTCTCCCACCTGG +
Preference number: 5 (lower is better)
Translates to: LPLLGPLEPRRYGLGPARKGICR*TDSPTW
Trigger: CCAGGTGGGAGAGTCAGTCAACCTGCAAATCCCCTT...CCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CCA 90 bp CGCAGGAAGAACTTGTCTCCCAGGGCCAGGTTTCGAACCGTCTGCTaGGTCACCATCACGGGCCGGGGATTCACAGGCACCCATTCTGAG +
Preference number: 5 (lower is better)
Translates to: RRKNLSPRARFRTVC*VTITGRGFTGTHSE
Trigger: CTCAGAATGGGTGCCTGTGAATCCCCGGCCCGTGATGGTGACCCAGCAGACGGTTCGAAACCTGGCCCTGGGAGACAAGTTCTTCCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CCA 90 bp TCCTGGTCCCCGCTGCGCACATTAACTCTCTGGTTGTCCAGAGCGTaGCCATTGTGGGTCCAAGAGACCTGTGGCTTGGGCTTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: SWSPLRTLTLWLSRA*PLWVQETCGLGFPW
Trigger: CCAGGGGAAGCCCAAGCCACAGGTCTCTTGGACCCACAATGGCCACGCTCTGGACAACCAGAGAGTTAATGTGCGCAGCGGGGACCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp CTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAGAGCGGGGAACACGGATCTaGGGGGCTTCAGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: LILGLDPASDGGGLQVLERGTRI*GASVIS
Trigger: AGAGATCACTGAAGCCCCCAAGATCCGTGTTCCCCG...CTCTAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp GGGGATTCCTGGGGTCCTGATCCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCCAGACATCCAGTAGCTaGATGCTGCTCGGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: GDSWGPDPQVCRTWWIVSQTSSS*MLLGGP
Trigger: CGGGCCCCCGAGCAGCATCAAGCTACTGGATGTCTG...GGACACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS GCA 90 bp ACACGCAGGAAGAACTTGTCTCCCAGGGCCAGGTTTCGAACCGTCTaGTGGGTCACCATCACGGGCCGGGGATTCACAGGCACCCATTCT +
Preference number: 5 (lower is better)
Translates to: TRRKNLSPRARFRTV*WVTITGRGFTGTHS
Trigger: AGAATGGGTGCCTGTGAATCCCCGGCCCGTGATGGTGACCCAGCAGACGGTTCGAAACCTGGCCCTGGGAGACAAGTTCTTCCTGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp CTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAGAGACACGCAGGAAGAACTaGTCTCCCAGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LILGLDPASDGGGLQVLETRRKN*SPRARF
Trigger: AAACCTGGCCCTGGGAGACAAGTTCTTCCTGCGTGT...CTCTAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp TGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCCTGATCCTGATGTCAATGCTGGCCTaGGCTTCCAAGCCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: WALLNPEGMAWGLPGLILMSMLA*ASKPSR
Trigger: TCTGGAAGGCTTGGAAGCCAAGGCCAGCATTGACAT...CAGGATCAGGCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp TGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCCTGGGGCCTGCCAGGCTTCATCCAGATGATCTaGGGCTTAGGTGATGCTCGG +
Preference number: 5 (lower is better)
Translates to: CPFWALLNPEGMAWGLPGFIQMI*GLGDAR
Trigger: CCGAGCATCACCTAAGCCCAAGATCATCTGGATGAA...GCCTGGCAGGCCCCAGGCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp ATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTCAGGGTGCAGACCCCTaGCTCGGAGACGGCACGGTA +
Preference number: 5 (lower is better)
Translates to: IQCTTLKRVPVSAPSGPSQGADP*LGDGTV
Trigger: TACCGTGCCGTCTCCGAGCAAGGGGTCTGCACCCTG...AGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS TCA 90 bp GTGTCCACTCGAGGGCAGCATTGCAACCCCAGACATCCAGTAGCTTaGTGCTGCTCGGGGGCCCGGGCTTCTCAATCACCAGGATGTCAA +
Preference number: 5 (lower is better)
Translates to: VSTRGQHCNPRHPVA*CCSGARASQSPGCQ
Trigger: TTGACATCCTGGTGATTGAGAAGCCCGGGCCCCCGAGCAGCATCAAGCTACTGGATGTCTGGGGTTGCAATGCTGCCCTCGAGTGGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CCA 90 bp CCGCTGCGCACATTAACTCTCTGGTTGTCCAGAGCGTGGCCATTGTaGGTCCAAGAGACCTGTGGCTTGGGCTTCCCCTGGAAGGGGATT +
Preference number: 5 (lower is better)
Translates to: PLRTLTLWLSRAWPL*VQETCGLGFPWKGI
Trigger: AATCCCCTTCCAGGGGAAGCCCAAGCCACAGGTCTCTTGGACCCACAATGGCCACGCTCTGGACAACCAGAGAGTTAATGTGCGCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp CATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTCTGTAGTGGGCACCTaGGCAGGCTCAGGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: HTVYNSEEGASLCPFWALSVVGT*AGSGAV
Trigger: GACAGCACCTGAGCCTGCCAAGGTGCCCACTACAGA...GAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp AGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAGGTATGGCGGCTTCAGTGATCTCTaGGATGTGGACAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: RGCQSLPLLGPLEPRRYGGFSDL*DVDRLV
Trigger: GACCAGCCTGTCCACATCCAAGAGATCACTGAAGCC...GCCATACCTTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp GGCCTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAACATTAACTCTCTGGTaGTCCAGAGCGTGGCCATTG +
Preference number: 5 (lower is better)
Translates to: GLILGLDPASDGGGLQVLTLTLW*SRAWPL
Trigger: CAATGGCCACGCTCTGGACAACCAGAGAGTTAATGT...TAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp GGCCTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTACATTGCCCTGTCCTTTaGTCTGCCTTCTGTACTGTG +
Preference number: 5 (lower is better)
Translates to: GLILGLDPASDGGGLQVLHCPVL*SAFCTV
Trigger: CACAGTACAGAAGGCAGACAAAAGGACAGGGCAATG...TAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp CCTCCCCTCCCTGTCTCCAGTGACATTTTATGCCTGGGAGGTGGATTCTTCTCTTCTGTAGTGGGCACCTaGGCAGGCTCAGGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: PPLPVSSDILCLGGGFFSSVVGT*AGSGAV
Trigger: GACAGCACCTGAGCCTGCCAAGGTGCCCACTACAGA...AGAGAAGAATCCACCTCCCAGGCATAAAATGTCACTGGAGACAGGGAGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp GTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACACACGCAGGAAGAACTaGTCTCCCAGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: VYNSEEGASLCPFWALLNTRRKN*SPRARF
Trigger: AAACCTGGCCCTGGGAGACAAGTTCTTCCTGCGTGT...GTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp ATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTCGGGGAACACGGATCTaGGGGGCTTCAGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: IQCTTLKRVPVSAPSGPSRGTRI*GASVIS
Trigger: AGAGATCACTGAAGCCCCCAAGATCCGTGTTCCCCG...AGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp CTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAGAGCGAAAAGAGTACGAGTaGCCAATGATGAGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: LILGLDPASDGGGLQVLERKEYE*PMMRSE
Trigger: CTCAGACCTCATCATTGGCAACTCGTACTCTTTTCG...CTCTAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp GGCCTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTACCCTGGATGTCCATCTaGTTTTTCATCCAGATGATC +
Preference number: 5 (lower is better)
Translates to: GLILGLDPASDGGGLQVLPWMSI*FFIQMI
Trigger: GATCATCTGGATGAAAAACAAGATGGACATCCAGGG...TAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp GATTCCTGGGGTCCTGATCCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCTTCATGTCAATGCTGGCCTaGGCTTCCAAGCCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: DSWGPDPQVCRTWWIVSFMSMLA*ASKPSR
Trigger: TCTGGAAGGCTTGGAAGCCAAGGCCAGCATTGACAT...GAAGGACACTATCCACCAAGTCCTGCAGACCTGAGGATCAGGACCCCAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp GTTCACCCAGAGCCTCAGAACCACCAAACGAGGAAGGGAGAGCAAGGACTGGGTTTCATCCAGATGATCTaGGGCTTAGGTGATGCTCGG +
Preference number: 5 (lower is better)
Translates to: VHPEPQNHQTRKGEQGLGFIQMI*GLGDAR
Trigger: CCGAGCATCACCTAAGCCCAAGATCATCTGGATGAA...ACCCAGTCCTTGCTCTCCCTTCCTCGTTTGGTGGTTCTGAGGCTCTGGGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp TTGATAGTTCACCCAGAGCCTCAGAACCACCAAACGAGGAAGGGAGAGCAAGGAAAGGGGATTTGCAGGTaGACTGACTCTCCCACCTGG +
Preference number: 5 (lower is better)
Translates to: LIVHPEPQNHQTRKGEQGKGICR*TDSPTW
Trigger: CCAGGTGGGAGAGTCAGTCAACCTGCAAATCCCCTT...TCCTTGCTCTCCCTTCCTCGTTTGGTGGTTCTGAGGCTCTGGGTGAACTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp GAAGAGATAGTGGGGAGTCGGGTAGAGAACCACCTCCACCCTTCTCAGTCCTTCACATTAACTCTCTGGTaGTCCAGAGCGTGGCCATTG +
Preference number: 5 (lower is better)
Translates to: EEIVGSRVENHLHPSQSFTLTLW*SRAWPL
Trigger: CAATGGCCACGCTCTGGACAACCAGAGAGTTAATGT...GAAGGACTGAGAAGGGTGGAGGTGGTTCTCTACCCGACTCCCCACTATCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp CCTCAGGTCTGCAGGACTTGGTGGATAGTGTCCTTCTGCGTCCTGGTATGTGACCATTGCCCTGTCCTTTaGTCTGCCTTCTGTACTGTG +
Preference number: 5 (lower is better)
Translates to: PQVCRTWWIVSFCVLVCDHCPVL*SAFCTV
Trigger: CACAGTACAGAAGGCAGACAAAAGGACAGGGCAATG...GTCACATACCAGGACGCAGAAGGACACTATCCACCAAGTCCTGCAGACCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp CTGATCCTGGGTCTGGACCCAGCGTCTGATGGAGGGGGCCTGCAGGTACTAGAGATAAACTCTCTAGGTTaGGCAGTAATATCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: LILGLDPASDGGGLQVLEINSLG*AVISAL
Trigger: CAAGGCAGATATTACTGCCAAACCTAGAGAGTTTAT...CTCTAGTACCTGCAGGCCCCCTCCATCAGACGCTGGGTCCAGACCCAGGATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS TCA 90 bp AGTGGAGGTATGGTCAGCCAGGGGCTGGGTGAACGAGGGCGCTTCTaGGAAGTCTCGCTCAATAAACTCTCTAGGTTTGGCAGTAATATC +
Preference number: 5 (lower is better)
Translates to: SGGMVSQGLGERGRF*EVSLNKLSRFGSNI
Trigger: GATATTACTGCCAAACCTAGAGAGTTTATTGAGCGAGACTTCTCAGAAGCGCCCTCGTTCACCCAGCCCCTGGCTGACCATACCTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp AACTCTGAAGAGGGTGCCAGTCTCTGCCCCTTCTGGGCCCTCTTGAACCCAGAAATAAACTCTCTAGGTTaGGCAGTAATATCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: NSEEGASLCPFWALLNPEINSLG*AVISAL
Trigger: CAAGGCAGATATTACTGCCAAACCTAGAGAGTTTAT...TTCTGGGTTCAAGAGGGCCCAGAAGGGGCAGAGACTGGCACCCTCTTCAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp ACGAGGAAGGGAGAGCAAGGACTGGGTCCCTACTTTCCTAATGAGGGAAAAGAACCCTGGATGTCCATCTaGTTTTTCATCCAGATGATC +
Preference number: 5 (lower is better)
Translates to: TRKGEQGLGPYFPNEGKEPWMSI*FFIQMI
Trigger: GATCATCTGGATGAAAAACAAGATGGACATCCAGGG...TTCTTTTCCCTCATTAGGAAAGTAGGGACCCAGTCCTTGCTCTCCCTTCCTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191577.2
CDS-3UTR CAA 90 bp TATTTGAATACTTCTCATACAGTGTACAACTCTGAAGAGGGTGCCAGTCTCTGCCGAAAAGAGTACGAGTaGCCAATGATGAGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: YLNTSHTVYNSEEGASLCRKEYE*PMMRSE
Trigger: CTCAGACCTCATCATTGGCAACTCGTACTCTTTTCG...GCAGAGACTGGCACCCTCTTCAGAGTTGTACACTGTATGAGAAGTATTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS TCA 72 bp CTGTGGCTCTGGAGCCTGCTCTTGCCCGGTGGACTCTaGTGCTGCCACCTCTCCAGAAGGCTCTGTAGTGGG +
Preference number: 6 (lower is better)
Translates to: LWLWSLLLPGGL*CCHLSRRLCSG
Trigger: CCCACTACAGAGCCTTCTGGAGAGGTGGCAGCATCAGAGTCCACCGGGCAAGAGCAGGCTCCAGAGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CCA 72 bp GAGGCTTCTGTGGCTCTGGAGCCTGCTCTTGCCCGGTaGACTCTGATGCTGCCACCTCTCCAGAAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: EASVALEPALAR*TLMLPPLQKAL
Trigger: CAGAGCCTTCTGGAGAGGTGGCAGCATCAGAGTCCACCGGGCAAGAGCAGGCTCCAGAGCCACAGAAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CCA 72 bp GGAGCTGTGGCTCACATCCTCCAAGGTCAGCCGCAGTaGGGCACTGGGGACATCTTCACTCGGAGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: GAVAHILQGQPQ*GTGDIFTRRFR
Trigger: CCTGAACCTCCGAGTGAAGATGTCCCCAGTGCCCCACTGCGGCTGACCTTGGAGGATGTGAGCCACAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CCA 72 bp AACTTGTCTCCCAGGGCCAGGTTTCGAACCGTCTGCTaGGTCACCATCACGGGCCGGGGATTCACAGGCACC +
Preference number: 6 (lower is better)
Translates to: NLSPRARFRTVC*VTITGRGFTGT
Trigger: GGTGCCTGTGAATCCCCGGCCCGTGATGGTGACCCAGCAGACGGTTCGAAACCTGGCCCTGGGAGACAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CCA 72 bp TTGGGGGCTTCAGTGATCTCTTGGATGTGGACAGGCTaGTCCAGAACGGCTGGAGGGCCTGCCCCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: LGASVISWMWTG*SRTAGGPAPAE
Trigger: CTCAGCAGGGGCAGGCCCTCCAGCCGTTCTGGACCAGCCTGTCCACATCCAAGAGATCACTGAAGCCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CAA 90 bp GGGCCTGCCCCTGCTGAGCTTACTGCAGTCACACGCAGGAAGAACTaGTCTCCCAGGGCCAGGTTTCGAACCGTCTGCTGGGTCACCATC +
Preference number: 6 (lower is better)
Translates to: GPAPAELTAVTRRKN*SPRARFRTVCWVTI
Trigger: GATGGTGACCCAGCAGACGGTTCGAAACCTGGCCCTGGGAGACAAGTTCTTCCTGCGTGTGACTGCAGTAAGCTCAGCAGGGGCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CAA 90 bp TCCCCGCTGCGCACATTAACTCTCTGGTTGTCCAGAGCGTGGCCATaGTGGGTCCAAGAGACCTGTGGCTTGGGCTTCCCCTGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: SPLRTLTLWLSRAWP*WVQETCGLGFPWKG
Trigger: CCCCTTCCAGGGGAAGCCCAAGCCACAGGTCTCTTGGACCCACAATGGCCACGCTCTGGACAACCAGAGAGTTAATGTGCGCAGCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS TCA 72 bp AGGCTGGTCCAGAACGGCTGGAGGGCCTGCCCCTGCTaGGCTTACTGCAGTCACACGCAGGAAGAACTTGTC +
Preference number: 6 (lower is better)
Translates to: RLVQNGWRACPC*AYCSHTQEELV
Trigger: GACAAGTTCTTCCTGCGTGTGACTGCAGTAAGCTCAGCAGGGGCAGGCCCTCCAGCCGTTCTGGACCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS TCA 72 bp CGAGGGCAGCATTGCAACCCCAGACATCCAGTAGCTTaGTGCTGCTCGGGGGCCCGGGCTTCTCAATCACCA +
Preference number: 6 (lower is better)
Translates to: RGQHCNPRHPVA*CCSGARASQSP
Trigger: TGGTGATTGAGAAGCCCGGGCCCCCGAGCAGCATCAAGCTACTGGATGTCTGGGGTTGCAATGCTGCCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS GCA 72 bp AAGAACTTGTCTCCCAGGGCCAGGTTTCGAACCGTCTaGTGGGTCACCATCACGGGCCGGGGATTCACAGGC +
Preference number: 6 (lower is better)
Translates to: KNLSPRARFRTV*WVTITGRGFTG
Trigger: GCCTGTGAATCCCCGGCCCGTGATGGTGACCCAGCAGACGGTTCGAAACCTGGCCCTGGGAGACAAGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CAA 72 bp TCGAGGGCAGCATTGCAACCCCAGACATCCAGTAGCTaGATGCTGCTCGGGGGCCCGGGCTTCTCAATCACC +
Preference number: 6 (lower is better)
Translates to: SRAALQPQTSSS*MLLGGPGFSIT
Trigger: GGTGATTGAGAAGCCCGGGCCCCCGAGCAGCATCAAGCTACTGGATGTCTGGGGTTGCAATGCTGCCCTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CAA 90 bp GGTGTCCACTCGAGGGCAGCATTGCAACCCCAGACATCCAGTAGCTaGATGCTGCTCGGGGGCCCGGGCTTCTCAATCACCAGGATGTCA +
Preference number: 6 (lower is better)
Translates to: GVHSRAALQPQTSSS*MLLGGPGFSITRMS
Trigger: TGACATCCTGGTGATTGAGAAGCCCGGGCCCCCGAGCAGCATCAAGCTACTGGATGTCTGGGGTTGCAATGCTGCCCTCGAGTGGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CCA 72 bp GTCCAGAGCGTGGCCATTGTGGGTCCAAGAGACCTGTaGCTTGGGCTTCCCCTGGAAGGGGATTTGCAGGTT +
Preference number: 6 (lower is better)
Translates to: VQSVAIVGPRDL*LGLPLEGDLQV
Trigger: AACCTGCAAATCCCCTTCCAGGGGAAGCCCAAGCCACAGGTCTCTTGGACCCACAATGGCCACGCTCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CAA 72 bp GAGTCCTGGTCCCCGCTGCGCACATTAACTCTCTGGTaGTCCAGAGCGTGGCCATTGTGGGTCCAAGAGACC +
Preference number: 6 (lower is better)
Translates to: ESWSPLRTLTLW*SRAWPLWVQET
Trigger: GGTCTCTTGGACCCACAATGGCCACGCTCTGGACAACCAGAGAGTTAATGTGCGCAGCGGGGACCAGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CAA 72 bp CCTGTGTCCTGGGGTGGTGTCCACTCGAGGGCAGCATaGCAACCCCAGACATCCAGTAGCTTGATGCTGCTC +
Preference number: 6 (lower is better)
Translates to: PVSWGGVHSRAA*QPQTSSSLMLL
Trigger: GAGCAGCATCAAGCTACTGGATGTCTGGGGTTGCAATGCTGCCCTCGAGTGGACACCACCCCAGGACACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS TCA 72 bp CAAGCCTTCCAGATGCACGGTGAGCTCATAGCGGCCTaGGTCTGCGCGCTGAGCAGAGCGAATGAAGAGGAT +
Preference number: 6 (lower is better)
Translates to: QAFQMHGELIAA*VCALSRANEED
Trigger: ATCCTCTTCATTCGCTCTGCTCAGCGCGCAGACTCAGGCCGCTATGAGCTCACCGTGCATCTGGAAGGCTTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CCA 72 bp ATGGAGTCCTGGTCCCCGCTGCGCACATTAACTCTCTaGTTGTCCAGAGCGTGGCCATTGTGGGTCCAAGAG +
Preference number: 6 (lower is better)
Translates to: MESWSPLRTLTL*LSRAWPLWVQE
Trigger: CTCTTGGACCCACAATGGCCACGCTCTGGACAACCAGAGAGTTAATGTGCGCAGCGGGGACCAGGACTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CAA 72 bp CGCACATTAACTCTCTGGTTGTCCAGAGCGTGGCCATaGTGGGTCCAAGAGACCTGTGGCTTGGGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: RTLTLWLSRAWP*WVQETCGLGFP
Trigger: GGGGAAGCCCAAGCCACAGGTCTCTTGGACCCACAATGGCCACGCTCTGGACAACCAGAGAGTTAATGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS CCA 72 bp ACATTAACTCTCTGGTTGTCCAGAGCGTGGCCATTGTaGGTCCAAGAGACCTGTGGCTTGGGCTTCCCCTGG +
Preference number: 6 (lower is better)
Translates to: TLTLWLSRAWPL*VQETCGLGFPW
Trigger: CCAGGGGAAGCCCAAGCCACAGGTCTCTTGGACCCACAATGGCCACGCTCTGGACAACCAGAGAGTTAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS TCA 72 bp ATGGTCAGCCAGGGGCTGGGTGAACGAGGGCGCTTCTaGGAAGTCTCGCTCAATAAACTCTCTAGGTTTGGC +
Preference number: 6 (lower is better)
Translates to: MVSQGLGERGRF*EVSLNKLSRFG
Trigger: GCCAAACCTAGAGAGTTTATTGAGCGAGACTTCTCAGAAGCGCCCTCGTTCACCCAGCCCCTGGCTGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS TCA 72 bp TGGTGCAGGTGGTGGGGTGATAGCGCTCCAACACTGTaGACCATTGCCCTGTCCTTTTGTCTGCCTTCTGTA +
Preference number: 6 (lower is better)
Translates to: WCRWWGDSAPTL*TIALSFCLPSV
Trigger: TACAGAAGGCAGACAAAAGGACAGGGCAATGGTTCACAGTGTTGGAGCGCTATCACCCCACCACCTGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2
CDS TCA 72 bp TCTCTAGGTTTGGCAGTAATATCTGCCTTGTGGATGTaGGCCAGCTCCTTGGTGGTGGTGGCTAAGTCACTG +
Preference number: 6 (lower is better)
Translates to: SLGLAVISALWM*ASSLVVVAKSL
Trigger: CAGTGACTTAGCCACCACCACCAAGGAGCTGGCTCACATCCACAAGGCAGATATTACTGCCAAACCTAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038445.13
ENSMUST00000191577.2