RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYBPC3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002100

Ensembl transcript IDs: ENSMUST00000111430.10, ENSMUST00000137942.8, ENSMUST00000169776.2

Found 524 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCAGCAGACCTGCCTGGTGTCACTGCTGGCCAGTCCTTCCAGGATaGACAGTTGCACACACACATGCAGTAGCAGAAAAGGGTGCTCCT +
Preference number: 1 (lower is better)
Translates to: PSRPAWCHCWPVLPG*TVAHTHAVAEKGAP
Trigger: AGGAGCACCCTTTTCTGCTACTGCATGTGTGTGTGCAACTGTGCATCCTGGAAGGACTGGCCAGCAGTGACACCAGGCAGGTCTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR GCA 90 bp TCACTGCTGGCCAGTCCTTCCAGGATGCACAGTTGCACACACACATaGAGTAGCAGAAAAGGGTGCTCCTCCAACTCCCTTCCGGTCTGG +
Preference number: 1 (lower is better)
Translates to: SLLASPSRMHSCTHT*SSRKGCSSNSLPVW
Trigger: CCAGACCGGAAGGGAGTTGGAGGAGCACCCTTTTCTGCTACTGCATGTGTGTGTGCAACTGTGCATCCTGGAAGGACTGGCCAGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR GCA 90 bp ACCTGCCTGGTGTCACTGCTGGCCAGTCCTTCCAGGATGCACAGTTaGACACACACATGCAGTAGCAGAAAAGGGTGCTCCTCCAACTCC +
Preference number: 1 (lower is better)
Translates to: TCLVSLLASPSRMHS*THTCSSRKGCSSNS
Trigger: GGAGTTGGAGGAGCACCCTTTTCTGCTACTGCATGTGTGTGTGCAACTGTGCATCCTGGAAGGACTGGCCAGCAGTGACACCAGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR GCA 90 bp TCCAGGATGCACAGTTGCACACACACATGCAGTAGCAGAAAAGGGTaGTCCTCCAACTCCCTTCCGGTCTGGTACACAGCCTGGCATCCA +
Preference number: 1 (lower is better)
Translates to: SRMHSCTHTCSSRKG*SSNSLPVWYTAWHP
Trigger: TGGATGCCAGGCTGTGTACCAGACCGGAAGGGAGTTGGAGGAGCACCCTTTTCTGCTACTGCATGTGTGTGTGCAACTGTGCATCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR CCA 90 bp GGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTaGCCAGTCCTTCCAGGATGCACAGTTGCACACACACATGCAGTA +
Preference number: 1 (lower is better)
Translates to: GSVSSEPSRPAWCHC*PVLPGCTVAHTHAV
Trigger: TACTGCATGTGTGTGTGCAACTGTGCATCCTGGAAGGACTGGCCAGCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR GCA 90 bp TTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTaGTGGCCAGTCCTTCCAGGATGCACAGTTGCACACACACATGCA +
Preference number: 1 (lower is better)
Translates to: LGSVSSEPSRPAWCH*WPVLPGCTVAHTHA
Trigger: TGCATGTGTGTGTGCAACTGTGCATCCTGGAAGGACTGGCCAGCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACCCAGTCCTTCCAGGATaGACAGTTGCACACACACAT +
Preference number: 2 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHPVLPG*TVAHTH
Trigger: ATGTGTGTGTGCAACTGTGCATCCTGGAAGGACTGG...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCCCTGCCTGGTGTCACTaGTGGCCAGTCCTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: AHTLYAPSINIILRVSFFPAWCH*WPVLPG
Trigger: TCCTGGAAGGACTGGCCAGCAGTGACACCAGGCAGG...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR-3UTR GCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCACCTGCCTGGTGTCACTaGTGGCCAGTCCTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSPAWCH*WPVLPG
Trigger: TCCTGGAAGGACTGGCCAGCAGTGACACCAGGCAGG...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR-3UTR GCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAAGAACCCAGCAGACCTaGCTGGTGTCACTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSRTQQT*LVSLLA
Trigger: GGCCAGCAGTGACACCAGGCAGGTCTGCTGGGTTCT...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR-3UTR CCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCGCCTGGTGTCACTGCTaGCCAGTCCTTCCAGGATGC +
Preference number: 2 (lower is better)
Translates to: EAHTLYAPSINIILRVSFAWCHC*PVLPGC
Trigger: GCATCCTGGAAGGACTGGCCAGCAGTGACACCAGGC...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR-3UTR CCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCGCCTGGTGTCACTGCTaGCCAGTCCTTCCAGGATGC +
Preference number: 2 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSAWCHC*PVLPGC
Trigger: GCATCCTGGAAGGACTGGCCAGCAGTGACACCAGGC...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAGCCTGGTGTCACTGCTaGCCAGTCCTTCCAGGATGC +
Preference number: 2 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEAWCHC*PVLPGC
Trigger: GCATCCTGGAAGGACTGGCCAGCAGTGACACCAGGC...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCCAGGATGCACAGTTaGACACACACATGCAGTAGC +
Preference number: 2 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVSRMHS*THTCSS
Trigger: GCTACTGCATGTGTGTGTGCAACTGTGCATCCTGGA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR-3UTR GCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAAGTTGCACACACACATaGAGTAGCAGAAAAGGGTGC +
Preference number: 2 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSSCTHT*SSRKGC
Trigger: GCACCCTTTTCTGCTACTGCATGTGTGTGTGCAACT...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR-3UTR GCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCAGTTGCACACACACATaGAGTAGCAGAAAAGGGTGC +
Preference number: 2 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSCTHT*SSRKGC
Trigger: GCACCCTTTTCTGCTACTGCATGTGTGTGTGCAACT...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTAGTTGCACACACACATaGAGTAGCAGAAAAGGGTGC +
Preference number: 2 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVSCTHT*SSRKGC
Trigger: GCACCCTTTTCTGCTACTGCATGTGTGTGTGCAACT...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR CCA 72 bp TGCTCCTCCAACTCCCTTCCGGTCTGGTACACAGCCTaGCATCCATTTGTACCTAGCCATCTCTGGGGAGCC +
Preference number: 3 (lower is better)
Translates to: CSSNSLPVWYTA*HPFVPSHLWGA
Trigger: GGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCAGACCGGAAGGGAGTTGGAGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR GCA 72 bp GTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTaGTGGCCAGTCCTTCCAGGATGCACAGTTGCACAC +
Preference number: 3 (lower is better)
Translates to: VSSEPSRPAWCH*WPVLPGCTVAH
Trigger: GTGTGCAACTGTGCATCCTGGAAGGACTGGCCAGCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR CCA 72 bp TCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTaGCCAGTCCTTCCAGGATGCACAGTTGCACACACA +
Preference number: 3 (lower is better)
Translates to: SSEPSRPAWCHC*PVLPGCTVAHT
Trigger: TGTGTGTGCAACTGTGCATCCTGGAAGGACTGGCCAGCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR GCA 72 bp GTGTCACTGCTGGCCAGTCCTTCCAGGATGCACAGTTaGACACACACATGCAGTAGCAGAAAAGGGTGCTCC +
Preference number: 3 (lower is better)
Translates to: VSLLASPSRMHS*THTCSSRKGCS
Trigger: GGAGCACCCTTTTCTGCTACTGCATGTGTGTGTGCAACTGTGCATCCTGGAAGGACTGGCCAGCAGTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR CCA 72 bp TTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTaGTGTCACTGCTGGCCAGTCCTTCCAGGATGCACA +
Preference number: 3 (lower is better)
Translates to: LGSVSSEPSRPA*CHCWPVLPGCT
Trigger: TGTGCATCCTGGAAGGACTGGCCAGCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
3UTR GCA 72 bp GCCAGTCCTTCCAGGATGCACAGTTGCACACACACATaGAGTAGCAGAAAAGGGTGCTCCTCCAACTCCCTT +
Preference number: 3 (lower is better)
Translates to: ASPSRMHSCTHT*SSRKGCSSNSL
Trigger: AAGGGAGTTGGAGGAGCACCCTTTTCTGCTACTGCATGTGTGTGTGCAACTGTGCATCCTGGAAGGACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGCTGGGGGCCGCCACTTaGGTGAGACAGTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILLGAAT*VRQWCL
Trigger: CAGACACCACTGTCTCACTCAAGTGGCGGCCCCCAG...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGGCAGGCGGTTCCCACTaGACAGTGCAGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILAGGSH*TVQESS
Trigger: CGAGGACTCCTGCACTGTGCAGTGGGAACCGCCTGC...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGCGTGCGTCGGAAAGCTaGTCTGAGGTCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILRASES*SEVQVS
Trigger: GGAGACCTGGACCTCAGATCAGCTTTCCGACGCACG...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGAGGGTGTGGCCCAGTTaGGGCCTTCTTCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILRVWPS*GLLPLC
Trigger: ACACAGGGGAAGAAGGCCTCAACTGGGCCACACCCT...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCGAACACGGCAGCACTaGCAGCGGTCACCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCRTRQH*QRSPPL
Trigger: CAGCGGAGGTGACCGCTGGCAGTGCTGCCGTGTTCG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGGGTGCTGGCCCACTTTaGTGCTCAGGTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILGAGPL*CSGPPT
Trigger: AGTGGGTGGACCTGAGCAGCAAAGTGGGCCAGCACC...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACGCGGTTTCAGGAGGCTaGCCCCAGCCACTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHAVSGG*PQPLGL
Trigger: CAGCCCGAGTGGCTGGGGCCAGCCTCCTGAAACCGC...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGCCTGCTTCATGCCCTTaGGCCTCTTCAGCATGCCTC +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILPASCP*ASSACL
Trigger: GAGGCATGCTGAAGAGGCTCAAGGGCATGAAGCAGG...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCTGGGGGCCGCCACTTaGGTGAGACAGTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCLGAAT*VRQWCL
Trigger: CAGACACCACTGTCTCACTCAAGTGGCGGCCCCCAG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGAGGTGCCTCCAGCTTTaGGTCCCTCCGGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILRCLQL*VPPETV
Trigger: GACAGTTTCCGGAGGGACTCAAAGCTGGAGGCACCT...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCGCAGCCGTGCCCCAGTaGGTAGGTCCTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCAAVPQ*VGPSPA
Trigger: TGCTGGTGAAGGACCTACCCACTGGGGCACGGCTGC...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACGGGGCTGCCCCTCTTTaGTCCAGGTCACCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHGAAPL*SRSPEA
Trigger: GGCCTCAGGTGACCTGGACCAAAGAGGGGCAGCCCC...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGCGATTTGCCAAGGGCTaGGTGAAGCTTGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILRFAKG*VKLGAS
Trigger: TGAGGCCCCAAGCTTCACCCAGCCCTTGGCAAATCG...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACGCACCGGGGGCTCTTTaGCAAAGAGCTCCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHAPGAL*QRAPCC
Trigger: GCAGCACGGAGCTCTTTGTCAAAGAGCCCCCGGTGC...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACCACTGTGCCTCGCCCTaGAAGTTGGTGGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHHCASP*KLVALQ
Trigger: CTGCAGGGCCACCAACTTGCAGGGCGAGGCACAGTG...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCGCGGCACTCACACTGTaGCTCGCCCTGCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCAALTL*LALQVG
Trigger: ACCAACTTGCAGGGCGAGGCACAGTGTGAGTGCCGC...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCCCACCATCACCAGCTaGTCTTCCAGGGACCGAGTG +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCPTITS*SSRDRV
Trigger: CACTCGGTCCCTGGAAGACCAGCTGGTGATGGTGGG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCCTGCTTCATGCCCTTaGGCCTCTTCAGCATGCCTC +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCPASCP*ASSACL
Trigger: GAGGCATGCTGAAGAGGCTCAAGGGCATGAAGCAGG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCGTCGTCAGCCAGTaGGCACTGGCTGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHCVVSQ*ALADGQ
Trigger: CTGACCATCAGCCAGTGCTCACTGGCTGACGACGCA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGTTGGGCCCCTTCTTCTaGGACCTCACACTCAAACTC +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILLGPFF*DLTLKL
Trigger: GAGTTTGAGTGTGAGGTCTCAGAAGAAGGGGCCCAA...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGAGCAACTTCAGATTCTaGCTTCTCTGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILSNFRF*LLWRGW
Trigger: CCAGCCCCTCCAGAGAAGGCAGAATCTGAAGTTGCT...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACGCTGGCCCACTTTGCTaGTCAGGTCCACCCACTTGC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHAGPLC*SGPPTC
Trigger: GCAAGTGGGTGGACCTGAGCAGCAAAGTGGGCCAGC...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACGCGGCACTCACACTGTaGCTCGCCCTGCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHAALTL*LALQVG
Trigger: ACCAACTTGCAGGGCGAGGCACAGTGTGAGTGCCGC...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCTTCTCTGGAGGGGCTaGCTCTGTGACCTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCLLWRG*LCDLEV
Trigger: GACCTCAAGGTCACAGAGCCAGCCCCTCCAGAGAAG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGTCTGTGACTCCGTGCTaGAAGGCGATGCGCTCATAT +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILSVTPC*KAMRSY
Trigger: ATATGAGCGCATCGCCTTCCAGCACGGAGTCACAGA...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACCCCACCATCACCAGCTaGTCTTCCAGGGACCGAGTG +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHPTITS*SSRDRV
Trigger: CACTCGGTCCCTGGAAGACCAGCTGGTGATGGTGGG...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACAGCACCAGCATCTTCTaGGGCATCAGGGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHSTSIF*GIRVWP
Trigger: GGGCCACACCCTGATGCCCCAGAAGATGCTGGTGCT...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGTCTTGGAATAAAGACTaGCTCCTTGGTGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILSWNKD*LLGGGS
Trigger: GCTGCCGCCACCAAGGAGCCAGTCTTTATTCCAAGA...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCGCCCTGCAAGTTGGTaGCCCTGCAGACATAGACAC +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCRPASW*PCRHRH
Trigger: GTGTCTATGTCTGCAGGGCCACCAACTTGCAGGGCG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACAATGAGCTCAGCCAGTaGCTGGCCTCCACTTGTGCG +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHNELSQ*LASTCA
Trigger: CGCACAAGTGGAGGCCAGTCACTGGCTGAGCTCATT...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGCCTCATCAGCAGGTGTaGCATCGTCAATGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILPHQQV*HRQWSV
Trigger: AACTGACCATTGACGATGTCACACCTGCTGATGAGG...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCAGGGGCAGGGTTTCCTaGTCTCCAGGGTCAATACTC +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCRGRVS*SPGSIL
Trigger: GAGTATTGACCCTGGAGATCAGGAAACCCTGCCCCT...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTGGAGCCGTGGTCGTTaGAGTATCTCCTGCACTGTC +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCWSRGR*SISCTV
Trigger: GACAGTGCAGGAGATACTGCAACGACCACGGCTCCA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGAATGATGGAGCGATTTaGCAAGGGCTGGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILNDGAI*QGLGEA
Trigger: AGCTTCACCCAGCCCTTGGCAAATCGCTCCATCATT...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGTCAATACTCCCTGCTTaGAGAACATGCGGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILSILPA*RTCGSE
Trigger: CTCGCTTCCGCATGTTCTGCAAGCAGGGAGTATTGA...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACGCCATCATCTTGGGGTaGCTTCCACTCCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHAIILG*LPLQSH
Trigger: GTGGCTCTGGAGTGGAAGCCACCCCAAGATGATGGC...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGGTATTGCCATCATCTTaGGGTGGCTTCCACTCCAGA +
Preference number: 4 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILVLPSS*GGFHSR
Trigger: TCTGGAGTGGAAGCCACCCCAAGATGATGGCAATAC...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACAGACTGGCTCCTTGGTaGCGGCAGCTTTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHRLAPW*RQLCHW
Trigger: CCAGTGACAAAGCTGCCGCCACCAAGGAGCCAGTCT...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACCGATTTGCCAAGGGCTaGGTGAAGCTTGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHRFAKG*VKLGAS
Trigger: TGAGGCCCCAAGCTTCACCCAGCCCTTGGCAAATCG...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCCCGCACCTTCACGCCTaGCCGCTCCGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSPHLHA*PLRLSL
Trigger: GAGGCTGAGACGGAGCGGTCAGGCGTGAAGGTGCGG...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTTGGGCCCCTTCTTCTaGGACCTCACACTCAAACTC +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCLGPFF*DLTLKL
Trigger: GAGTTTGAGTGTGAGGTCTCAGAAGAAGGGGCCCAA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTGGTCCAGGTCACCTaGGGCCGGGGTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFLVQVT*GRGLPW
Trigger: CCAGGGCAAACCCCGGCCTCAGGTGACCTGGACCAA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACAGGGGCAGGGTTTCCTaGTCTCCAGGGTCAATACTC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHRGRVS*SPGSIL
Trigger: GAGTATTGACCCTGGAGATCAGGAAACCCTGCCCCT...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTCGAACACGGCAGCACTaGCAGCGGTCACCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVRTRQH*QRSPPL
Trigger: CAGCGGAGGTGACCGCTGGCAGTGCTGCCGTGTTCG...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCGTTGCAGTATCTCCTaGACTGTCACAGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCRCSIS*TVTGSL
Trigger: CAAGGAGCCTGTGACAGTGCAGGAGATACTGCAACG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCTGCAGGATCAGCGTTaGCTTGTCCTCCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCLQDQR*LVLHVL
Trigger: GAGAACATGGAGGACAAGGCAACGCTGATCCTGCAG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACAGATTCTGCCTTCTCTaGAGGGGCTGGCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHRFCLL*RGWLCD
Trigger: GTCACAGAGCCAGCCCCTCCAGAGAAGGCAGAATCT...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCGCGGTTTCAGGAGGCTaGCCCCAGCCACTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSAVSGG*PQPLGL
Trigger: CAGCCCGAGTGGCTGGGGCCAGCCTCCTGAAACCGC...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCAACCACAATGGTGTCTaGTGTGCTGCCGGGACAATC +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCNHNGV*CAAGTI
Trigger: GATTGTCCCGGCAGCACACCAGACACCATTGTGGTT...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCATGCGCCTCGCCTCGTaGCTCAGCTCCCGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFMRLAS*LSSRSR
Trigger: TCTGCTGCGGGAGCTGAGCCACGAGGCGAGGCGCAT...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCGGGGCTGCCCCTCTTTaGTCCAGGTCACCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFGAAPL*SRSPEA
Trigger: GGCCTCAGGTGACCTGGACCAAAGAGGGGCAGCCCC...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCATCCTGGGGAGGACTTaGCTTGTCCACAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCILGRT*LVHNLQ
Trigger: CTGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGAT...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTCCAGTGAGCACTGGCTaGTGGTCAGGGTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVPVSTG*WSGCAW
Trigger: CCAAGCGCACCCTGACCATCAGCCAGTGCTCACTGG...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACGCAGCAGATCAAAGTTaGGCCTCATCCACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHAADQS*ASSTCS
Trigger: GCTACAGGTGGATGAGGCTCAACTTTGATCTGCTGC...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCCTGGGGGCCGCCACTTaGGTGAGACAGTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFLGAAT*VRQWCL
Trigger: CAGACACCACTGTCTCACTCAAGTGGCGGCCCCCAG...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCTTGGTCCAGGTCACCTaGGGCCGGGGTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSLVQVT*GRGLPW
Trigger: CCAGGGCAAACCCCGGCCTCAGGTGACCTGGACCAA...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCACTCCAGAGCCACATTaGAACCCCAAGTCTCAACGA +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCTPEPH*NPKSQR
Trigger: TCGTTGAGACTTGGGGTTTCAATGTGGCTCTGGAGT...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACCCACCATGTTATGGCTaGAGACCCGGAAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHPPCYG*RPGSSS
Trigger: GCTACTACTTCCGGGTCTTCAGCCATAACATGGTGG...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTGCAGGCGGTTCCCACTaGACAGTGCAGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVAGGSH*TVQESS
Trigger: CGAGGACTCCTGCACTGTGCAGTGGGAACCGCCTGC...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTCCCACGGCATTGACTaGGTAGACTCGCATCTCATA +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCSHGID*VDSHLI
Trigger: TATGAGATGCGAGTCTACGCAGTCAATGCCGTGGGA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCCGCTCTGTCAGCCCCTaGAGAGCAGGTGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFRSVSP*RAGVHS
Trigger: CGAGTGGACACCTGCTCTGCAGGGGCTGACAGAGCG...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTCACCTGCCAGGGGCTaGCCCTCTTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSPARG*PSLVQV
Trigger: GACCTGGACCAAAGAGGGGCAGCCCCTGGCAGGTGA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCACCTGCCAGGGGCTaGCCCTCTTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVSPARG*PSLVQV
Trigger: GACCTGGACCAAAGAGGGGCAGCCCCTGGCAGGTGA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCCCAGATCTCTGTATTaGCATCATCTTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCPRSLY*HHLGVA
Trigger: AGCCACCCCAAGATGATGGCAATACAGAGATCTGGG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACGCAAGTTGGTGGCCCTaGAGACATAGACACCACCAT +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHASWWP*RHRHHH
Trigger: ATGGTGGTGTCTATGTCTGCAGGGCCACCAACTTGC...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCACACTGTGCCTCGCCCTaGAAGTTGGTGGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSHCASP*KLVALQ
Trigger: CTGCAGGGCCACCAACTTGCAGGGCGAGGCACAGTG...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCCACTGTGCCTCGCCCTaGAAGTTGGTGGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFHCASP*KLVALQ
Trigger: CTGCAGGGCCACCAACTTGCAGGGCGAGGCACAGTG...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTTCCAACTCAGTGGCTaGAGCAGGGACTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHFQLSG*SRDFFG
Trigger: CCCAAAGAAGTCCCTGCTCCAGCCACTGAGTTGGAA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGGACCCGGCCTATATaGGACACCTTTATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHWTRPI*DTFMRL
Trigger: CAACCGCATAAAGGTGTCCCATATAGGCCGGGTCCA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTTGACCTCCATGAAGTaGAGCTTGGCAGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCLTSMK*SLADRL
Trigger: CAACCTGTCTGCCAAGCTCCACTTCATGGAGGTCAA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTAGACGCTGCGGTCTTTaGTGGTCTCCACCCGGACCC +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVRRCGL*WSPPGP
Trigger: GGGTCCGGGTGGAGACCACCAAAGACCGCAGCGTCT...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCAGACGCTGCGGTCTTTaGTGGTCTCCACCCGGACCC +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFRRCGL*WSPPGP
Trigger: GGGTCCGGGTGGAGACCACCAAAGACCGCAGCGTCT...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAAGACGCTGCGGTCTTTaGTGGTCTCCACCCGGACCC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSRRCGL*WSPPGP
Trigger: GGGTCCGGGTGGAGACCACCAAAGACCGCAGCGTCT...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTGCAGCCGTGCCCCAGTaGGTAGGTCCTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVAAVPQ*VGPSPA
Trigger: TGCTGGTGAAGGACCTACCCACTGGGGCACGGCTGC...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTCTGGCGCAGGTGTCTaGGCAGTTGGAGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSGAGV*AVGAVV
Trigger: GACCACGGCTCCAACTGCCCAGACACCTGCGCCAGA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTCTGGCGCAGGTGTCTaGGCAGTTGGAGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSGAGV*AVGAVV
Trigger: GACCACGGCTCCAACTGCCCAGACACCTGCGCCAGA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATCTGGCGCAGGTGTCTaGGCAGTTGGAGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSSGAGV*AVGAVV
Trigger: GACCACGGCTCCAACTGCCCAGACACCTGCGCCAGA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACCAACTTTCTTCTGGATaGTCTGGCGCAGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHQLSSG*SGAGVW
Trigger: CCAGACACCTGCGCCAGACCATCCAGAAGAAAGTTG...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCGGGGCTGCCCCTCTTTaGTCCAGGTCACCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSGAAPL*SRSPEA
Trigger: GGCCTCAGGTGACCTGGACCAAAGAGGGGCAGCCCC...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCGTATTGCCATCATCTTaGGGTGGCTTCCACTCCAGA +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCVLPSS*GGFHSR
Trigger: TCTGGAGTGGAAGCCACCCCAAGATGATGGCAATAC...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCACCTTGGCTTCTTGTTaGAGGCTGACACTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCTLASC*RLTLVS
Trigger: AGAAACCAGTGTCAGCCTTCAACAAGAAGCCAAGGT...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCGCACCTTCACGCCTaGCCGCTCCGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEPHLHA*PLRLSL
Trigger: GAGGCTGAGACGGAGCGGTCAGGCGTGAAGGTGCGG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCCGTGCGTCGGAAAGCTaGTCTGAGGTCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFRASES*SEVQVS
Trigger: GGAGACCTGGACCTCAGATCAGCTTTCCGACGCACG...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCGCACCGGGGGCTCTTTaGCAAAGAGCTCCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSAPGAL*QRAPCC
Trigger: GCAGCACGGAGCTCTTTGTCAAAGAGCCCCCGGTGC...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTAGGGTGTGGCCCAGTTaGGGCCTTCTTCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVRVWPS*GLLPLC
Trigger: ACACAGGGGAAGAAGGCCTCAACTGGGCCACACCCT...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAAGGGTGTGGCCCAGTTaGGGCCTTCTTCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSRVWPS*GLLPLC
Trigger: ACACAGGGGAAGAAGGCCTCAACTGGGCCACACCCT...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATGCCCTGGAAAGGGATaGGGAGGTTCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSCPGKG*GGSQAP
Trigger: GGGAGCCTGTGAACCTCCTCATCCCTTTCCAGGGCA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTGCCCTGGAAAGGGATaGGGAGGTTCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVCPGKG*GGSQAP
Trigger: GGGAGCCTGTGAACCTCCTCATCCCTTTCCAGGGCA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTTGCCAAGGGCTGGGTaGAGCTTGGGGCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFLPRAG*SLGPQR
Trigger: TCTCTGAGGCCCCAAGCTTCACCCAGCCCTTGGCAA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTGCCAAGGGCTGGGTaGAGCTTGGGGCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFLPRAG*SLGPQR
Trigger: TCTCTGAGGCCCCAAGCTTCACCCAGCCCTTGGCAA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACGATCCAGGCCATTCTTaGACCAGGAAATCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHDPGHS*TRKSWA
Trigger: AGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGATC...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTGGTGCTGGCCCACTTTaGTGCTCAGGTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVGAGPL*CSGPPT
Trigger: AGTGGGTGGACCTGAGCAGCAAAGTGGGCCAGCACC...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCGAAGATGTACTTGCTaGCACTCATCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCRRCTC*HSSGSP
Trigger: AGGAGATCCAGATGAGTGGCAGCAAGTACATCTTCG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCTCACCTGCCAGGGGCTaGCCCTCTTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSSPARG*PSLVQV
Trigger: GACCTGGACCAAAGAGGGGCAGCCCCTGGCAGGTGA...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTGGGGCTGTTCCGGATaGTCACCTCCTCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVWGCSG*SPPHLP
Trigger: TGGCAGGTGAGGAGGTGAGCATCCGGAACAGCCCCA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACCCCAGATCTCTGTATTaGCATCATCTTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHPRSLY*HHLGVA
Trigger: AGCCACCCCAAGATGATGGCAATACAGAGATCTGGG...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACAATGATGGAGCGATTTaGCAAGGGCTGGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHNDGAI*QGLGEA
Trigger: AGCTTCACCCAGCCCTTGGCAAATCGCTCCATCATT...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTTTCTTCCAACTCAGTaGCTGGAGCAGGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCFLPTQ*LEQGLL
Trigger: AAGAAGTCCCTGCTCCAGCCACTGAGTTGGAAGAAA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAGCGGTTTCAGGAGGCTaGCCCCAGCCACTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEAVSGG*PQPLGL
Trigger: CAGCCCGAGTGGCTGGGGCCAGCCTCCTGAAACCGC...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATGCAGCTGCAGGTGCTaGCCCACTTTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSCSCRC*PTLLLR
Trigger: CCTGAGCAGCAAAGTGGGCCAGCACCTGCAGCTGCA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATCAGCCAGTGAGCACTaGCTGATGGTCAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSSASEH*LMVRVR
Trigger: GCGCACCCTGACCATCAGCCAGTGCTCACTGGCTGA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTCAGCCAGTGAGCACTaGCTGATGGTCAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSASEH*LMVRVR
Trigger: GCGCACCCTGACCATCAGCCAGTGCTCACTGGCTGA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTTCAGCCATTTGACTTaGGCCCCTTCTTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHFSHLT*APSSET
Trigger: GGTCTCAGAAGAAGGGGCCCAAGTCAAATGGCTGAA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTCAATGGTCAGTTTGTaGACCCGGCCTATATGGGAC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHSMVSL*TRPIWD
Trigger: GTCCCATATAGGCCGGGTCCACAAACTGACCATTGA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAAGCACCAGCATCTTCTaGGGCATCAGGGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSSTSIF*GIRVWP
Trigger: GGGCCACACCCTGATGCCCCAGAAGATGCTGGTGCT...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCACTGTGAGGTTGACCTaGTCCTCGCCCACGGGGTTC +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFTVRLT*SSPTGF
Trigger: GAACCCCGTGGGCGAGGACCAGGTCAACCTCACAGT...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTACTGTGAGGTTGACCTaGTCCTCGCCCACGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVTVRLT*SSPTGF
Trigger: GAACCCCGTGGGCGAGGACCAGGTCAACCTCACAGT...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCGCAGCCGTGCCCCAGTaGGTAGGTCCTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSAAVPQ*VGPSPA
Trigger: TGCTGGTGAAGGACCTACCCACTGGGGCACGGCTGC...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCACCTGCTTCATGCCCTTaGGCCTCTTCAGCATGCCTC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSPASCP*ASSACL
Trigger: GAGGCATGCTGAAGAGGCTCAAGGGCATGAAGCAGG...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATTGGTCCAGGTCACCTaGGGCCGGGGTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSELVQVT*GRGLPW
Trigger: CCAGGGCAAACCCCGGCCTCAGGTGACCTGGACCAA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCTTGCCAAGGGCTGGGTaGAGCTTGGGGCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSLPRAG*SLGPQR
Trigger: TCTCTGAGGCCCCAAGCTTCACCCAGCCCTTGGCAA...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGGTGCCTCCAGCTTTaGGTCCCTCCGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFRCLQL*VPPETA
Trigger: AGCAGTTTCCGGAGGGACTCAAAGCTGGAGGCACCT...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137942.8
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTCATGCAGCTGCAGGTaGTGGCCCACTTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSCSCR*WPTLLL
Trigger: GAGCAGCAAAGTGGGCCAGCACCTGCAGCTGCATGA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTGCATCCTCCAGGGTTaGTTCATTGATGATCAAGTG +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCCILQG*FIDDQV
Trigger: CACTTGATCATCAATGAAGCAACCCTGGAGGATGCA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTATGGGACACCTTTATaGGGTTGTCAGGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHYGTPL*GCQAPV
Trigger: AACTGGTGCCTGACAACCGCATAAAGGTGTCCCATA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACATCTTGGGAGGTTCCTaGCTAGGCACAAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHILGGS*LGTKSI
Trigger: GATTGACTTTGTGCCTAGGCAGGAACCTCCCAAGAT...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCGCTCTGTCAGCCCCTaGAGAGCAGGTGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTRSVSP*RAGVHS
Trigger: CGAGTGGACACCTGCTCTGCAGGGGCTGACAGAGCG...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTCACCAGCATCGATGTaGGCTCTGTCAGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSPASM*ALSAPA
Trigger: TGCAGGGGCTGACAGAGCGCACATCGATGCTGGTGA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCACCAGCATCGATGTaGGCTCTGTCAGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVSPASM*ALSAPA
Trigger: TGCAGGGGCTGACAGAGCGCACATCGATGCTGGTGA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCTGGGGCTGTTCCGGATaGTCACCTCCTCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSWGCSG*SPPHLP
Trigger: TGGCAGGTGAGGAGGTGAGCATCCGGAACAGCCCCA...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCTGCAGCTGCAGGTGCTaGCCCACTTTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSCSCRC*PTLLLR
Trigger: CCTGAGCAGCAAAGTGGGCCAGCACCTGCAGCTGCA...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCACTGTGAGGTTGACCTaGTCCTCGCCCACGGGGTTC +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSTVRLT*SSPTGF
Trigger: GAACCCCGTGGGCGAGGACCAGGTCAACCTCACAGT...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAATGCGCCTCGCCTCGTaGCTCAGCTCCCGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEMRLAS*LSSRSR
Trigger: TCTGCTGCGGGAGCTGAGCCACGAGGCGAGGCGCAT...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTGCCATCATCTTGGGGTaGCTTCCACTCCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVAIILG*LPLQSH
Trigger: GTGGCTCTGGAGTGGAAGCCACCCCAAGATGATGGC...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGCCATCATCTTGGGGTaGCTTCCACTCCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSAIILG*LPLQSH
Trigger: GTGGCTCTGGAGTGGAAGCCACCCCAAGATGATGGC...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTAGACTGGCTCCTTGGTaGCGGCAGCTTTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVRLAPW*RQLCHW
Trigger: CCAGTGACAAAGCTGCCGCCACCAAGGAGCCAGTCT...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCCCTCGCCCTGCAAGTTaGTGGCCCTGCAGACATAGA +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFPRPAS*WPCRHR
Trigger: TCTATGTCTGCAGGGCCACCAACTTGCAGGGCGAGG...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCAGTGAGCACTGGCTaGTGGTCAGGGTGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEPVSTG*WSGCAW
Trigger: CCAAGCGCACCCTGACCATCAGCCAGTGCTCACTGG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTGCGTCGTCAGCCAGTaGGCACTGGCTGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTCVVSQ*ALADGQ
Trigger: CTGACCATCAGCCAGTGCTCACTGGCTGACGACGCA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAATGAGCTCAGCCAGTaGCTGGCCTCCACTTGTGCG +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSNELSQ*LASTCA
Trigger: CGCACAAGTGGAGGCCAGTCACTGGCTGAGCTCATT...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCGCGTACATTCTCATCTaGAACCTCACACTTAAACAC +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCAYILI*NLTLKH
Trigger: GTGTTTAAGTGTGAGGTTTCAGATGAGAATGTACGC...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTCTTCTGAAAGGCTGTaGTCTTCTTTTCATCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCSSERL*SSFHPA
Trigger: AGCAGGATGAAAAGAAGAGCACAGCCTTTCAGAAGA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACACTCGAAGATGTACTTaGTGCCACTCATCTGGATCT +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHTRRCT*CHSSGS
Trigger: AGATCCAGATGAGTGGCAGCAAGTACATCTTCGAGT...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAGCAGGCGGTTCCCACTaGACAGTGCAGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEAGGSH*TVQESS
Trigger: CGAGGACTCCTGCACTGTGCAGTGGGAACCGCCTGC...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACAGCTCTTTTTCTTCTTaGGCTCCAGGATGTATCCCA +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHSSFSS*APGCIP
Trigger: TGGGATACATCCTGGAGCGCAAGAAGAAAAAGAGCT...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACGCTCTGTCAGCCCCTaGAGAGCAGGTGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSERSVSP*RAGVHS
Trigger: CGAGTGGACACCTGCTCTGCAGGGGCTGACAGAGCG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCCCGGGACAATCCAAGTaGATCTTGGGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFPGQSK*ILGGSC
Trigger: GCAGGAACCTCCCAAGATCCACTTGGATTGTCCCGG...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCACCGGGACAATCCAAGTaGATCTTGGGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSPGQSK*ILGGSC
Trigger: GCAGGAACCTCCCAAGATCCACTTGGATTGTCCCGG...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCCAGCAACAACCACAATaGTGTCTGGTGTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFQQQPQ*CLVCCR
Trigger: CCGGCAGCACACCAGACACCATTGTGGTTGTTGCTG...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTCAGCAACAACCACAATaGTGTCTGGTGTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVQQQPQ*CLVCCR
Trigger: CCGGCAGCACACCAGACACCATTGTGGTTGTTGCTG...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCAGCACCAGCATCTTCTaGGGCATCAGGGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTSTSIF*GIRVWP
Trigger: GGGCCACACCCTGATGCCCCAGAAGATGCTGGTGCT...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTCGGAGCATCCCTCCTaGCAGTACTCCACGCTGTAT +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSEHPS*QYSTLY
Trigger: ATACAGCGTGGAGTACTGCCAGGAGGGATGCTCCGA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTACGATCCGGATATCCTaGGGAGGACTTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVTIRIS*GGLGLS
Trigger: GGACAAGCCAAGTCCTCCCCAGGATATCCGGATCGT...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCACGATCCGGATATCCTaGGGAGGACTTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFTIRIS*GGLGLS
Trigger: GGACAAGCCAAGTCCTCCCCAGGATATCCGGATCGT...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACTGGCTCCTTGGTaGCGGCAGCTTTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSRLAPW*RQLCHW
Trigger: CCAGTGACAAAGCTGCCGCCACCAAGGAGCCAGTCT...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGTGATGCCTGGTCTTaGAATAAAGACTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHCDAWS*NKDWLL
Trigger: AAGGAGCCAGTCTTTATTCCAAGACCAGGCATCACA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCCGCCCTGCAAGTTGGTaGCCCTGCAGACATAGACAC +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSRPASW*PCRHRH
Trigger: GTGTCTATGTCTGCAGGGCCACCAACTTGCAGGGCG...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCCCAGCAGAAGTGGTCTaGGCATCTGTGATGTGCAAC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFPAEVV*ASVMCN
Trigger: GTTGCACATCACAGATGCTCAGACCACTTCTGCTGG...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCACCAGCAGAAGTGGTCTaGGCATCTGTGATGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSPAEVV*ASVMCN
Trigger: GTTGCACATCACAGATGCTCAGACCACTTCTGCTGG...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATGCGTCGTCAGCCAGTaGGCACTGGCTGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSECVVSQ*ALADGQ
Trigger: CTGACCATCAGCCAGTGCTCACTGGCTGACGACGCA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGCAGCAGATCAAAGTTaGGCCTCATCCACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSAADQS*ASSTCS
Trigger: GCTACAGGTGGATGAGGCTCAACTTTGATCTGCTGC...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTGCAGCAGATCAAAGTTaGGCCTCATCCACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVAADQS*ASSTCS
Trigger: GCTACAGGTGGATGAGGCTCAACTTTGATCTGCTGC...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATGCCCTGGAAAGGGATaGGGAGGTTCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSECPGKG*GGSQAP
Trigger: GGGAGCCTGTGAACCTCCTCATCCCTTTCCAGGGCA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCACCACCATGTTATGGCTaGAGACCCGGAAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSPPCYG*RPGSSS
Trigger: GCTACTACTTCCGGGTCTTCAGCCATAACATGGTGG...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGCAACTTCAGATTCTaGCTTCTCTGGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSNFRF*LLWRGW
Trigger: CCAGCCCCTCCAGAGAAGGCAGAATCTGAAGTTGCT...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTCATGCAGCTGCAGGTaGTGGCCCACTTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTSCSCR*WPTLLL
Trigger: GAGCAGCAAAGTGGGCCAGCACCTGCAGCTGCATGA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTCTTCTGAAAGGCTGTaGTCTTCTTTTCATCCTGCT +
Preference number: 4 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHSSERL*SSFHPA
Trigger: AGCAGGATGAAAAGAAGAGCACAGCCTTTCAGAAGA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTCACCAGCATCGATGTaGGCTCTGTCAGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTSPASM*ALSAPA
Trigger: TGCAGGGGCTGACAGAGCGCACATCGATGCTGGTGA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCACGTTGCAGTATCTCCTaGACTGTCACAGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSRCSIS*TVTGSL
Trigger: CAAGGAGCCTGTGACAGTGCAGGAGATACTGCAACG...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATGGGGCTGTTCCGGATaGTCACCTCCTCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEWGCSG*SPPHLP
Trigger: TGGCAGGTGAGGAGGTGAGCATCCGGAACAGCCCCA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCCTGCAGGATCAGCGTTaGCTTGTCCTCCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFLQDQR*LVLHVL
Trigger: GAGAACATGGAGGACAAGGCAACGCTGATCCTGCAG...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGCAAGTTGGTGGCCCTaGAGACATAGACACCACCAT +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSASWWP*RHRHHH
Trigger: ATGGTGGTGTCTATGTCTGCAGGGCCACCAACTTGC...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCGCAAGTTGGTGGCCCTaGAGACATAGACACCACCAT +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFASWWP*RHRHHH
Trigger: ATGGTGGTGTCTATGTCTGCAGGGCCACCAACTTGC...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAGCGGCACTCACACTGTaGCTCGCCCTGCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEAALTL*LALQVG
Trigger: ACCAACTTGCAGGGCGAGGCACAGTGTGAGTGCCGC...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCCACTGGTTTCTTCCCTaGCTCCGGCATCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFHWFLP*LRHLEN
Trigger: GTTCTCAAGATGCCGGAGCCAGGGAAGAAACCAGTG...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCGAGCAGGGACTTCTTTaGGGGCTCCTGGAGCAACTT +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSEQGLL*GLLEQL
Trigger: AAGTTGCTCCAGGAGCCCCCAAAGAAGTCCCTGCTC...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCACCATCACCAGCTaGTCTTCCAGGGACCGAGTG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEPTITS*SSRDRV
Trigger: CACTCGGTCCCTGGAAGACCAGCTGGTGATGGTGGG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATGGACCCGGCCTATATaGGACACCTTTATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSWTRPI*DTFMRL
Trigger: CAACCGCATAAAGGTGTCCCATATAGGCCGGGTCCA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAACCACAATGGTGTCTaGTGTGCTGCCGGGACAATC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFNHNGV*CAAGTI
Trigger: GATTGTCCCGGCAGCACACCAGACACCATTGTGGTT...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCCAACTTTCTTCTGGATaGTCTGGCGCAGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFQLSSG*SGAGVW
Trigger: CCAGACACCTGCGCCAGACCATCCAGAAGAAAGTTG...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTCCCCAACTTTCTTCTaGATGGTCTGGCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSPTFF*MVWRRC
Trigger: ACACCTGCGCCAGACCATCCAGAAGAAAGTTGGGGA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTATCCTGGGGAGGACTTaGCTTGTCCACAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVILGRT*LVHNLQ
Trigger: CTGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGAT...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCACGGCAGCTTTGTCACTaGAACCCACCATGTTATGGC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSRQLCH*NPPCYG
Trigger: GCCATAACATGGTGGGTTCCAGTGACAAAGCTGCCG...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCCGGCAGCTTTGTCACTaGAACCCACCATGTTATGGC +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFRQLCH*NPPCYG
Trigger: GCCATAACATGGTGGGTTCCAGTGACAAAGCTGCCG...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTGGAATAAAGACTaGCTCCTTGGTGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVSWNKD*LLGGGS
Trigger: GCTGCCGCCACCAAGGAGCCAGTCTTTATTCCAAGA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCGATTTGCCAAGGGCTaGGTGAAGCTTGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTRFAKG*VKLGAS
Trigger: TGAGGCCCCAAGCTTCACCCAGCCCTTGGCAAATCG...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCTTGGGCCCCTTCTTCTaGGACCTCACACTCAAACTC +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSLGPFF*DLTLKL
Trigger: GAGTTTGAGTGTGAGGTCTCAGAAGAAGGGGCCCAA...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAAATGAGCTCAGCCAGTaGCTGGCCTCCACTTGTGCG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSENELSQ*LASTCA
Trigger: CGCACAAGTGGAGGCCAGTCACTGGCTGAGCTCATT...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCCCTCATCAGCAGGTGTaGCATCGTCAATGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFPHQQV*HRQWSV
Trigger: AACTGACCATTGACGATGTCACACCTGCTGATGAGG...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAACTCCAGAGCCACATTaGAACCCCAAGTCTCAACGA +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSTPEPH*NPKSQR
Trigger: TCGTTGAGACTTGGGGTTTCAATGTGGCTCTGGAGT...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCGATCCAGGCCATTCTTaGACCAGGAAATCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFDPGHS*TRKSWA
Trigger: AGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGATC...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTACTGCATAGTGTCCTaGATCCTCCAGGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFYCIVS*ILQGCF
Trigger: GAAGCAACCCTGGAGGATGCAGGACACTATGCAGTA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATACTGCATAGTGTCCTaGATCCTCCAGGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSYCIVS*ILQGCF
Trigger: GAAGCAACCCTGGAGGATGCAGGACACTATGCAGTA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTGTGTTACAGTCTTCTaGCAGACCACAGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFCVTVF*QTTVGA
Trigger: TGCTCCCACTGTGGTCTGGCAGAAGACTGTAACACA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTCCCACGGCATTGACTaGGTAGACTCGCATCTCATA +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSHGID*VDSHLI
Trigger: TATGAGATGCGAGTCTACGCAGTCAATGCCGTGGGA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTCCCACGGCATTGACTaGGTAGACTCGCATCTCATA +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSHGID*VDSHLI
Trigger: TATGAGATGCGAGTCTACGCAGTCAATGCCGTGGGA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTGGAGCCGTGGTCGTTaGAGTATCTCCTGCACTGTC +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTWSRGR*SISCTV
Trigger: GACAGTGCAGGAGATACTGCAACGACCACGGCTCCA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTAATGATGGAGCGATTTaGCAAGGGCTGGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVNDGAI*QGLGEA
Trigger: AGCTTCACCCAGCCCTTGGCAAATCGCTCCATCATT...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCAATACTCCCTGCTTaGAGAACATGCGGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVSILPA*RTCGSE
Trigger: CTCGCTTCCGCATGTTCTGCAAGCAGGGAGTATTGA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTAGGGTCAATACTCCCTaGTTGCAGAACATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVRVNTP*LQNMRK
Trigger: CTTCCGCATGTTCTGCAAGCAGGGAGTATTGACCCT...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACTTCTCTGGAGGGGCTaGCTCTGTGACCTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSELLWRG*LCDLEV
Trigger: GACCTCAAGGTCACAGAGCCAGCCCCTCCAGAGAAG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCGAGCAGGGACTTCTTTaGGGGCTCCTGGAGCAACTT +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTEQGLL*GLLEQL
Trigger: AAGTTGCTCCAGGAGCCCCCAAAGAAGTCCCTGCTC...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATTCAGCCATTTGACTTaGGCCCCTTCTTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSFSHLT*APSSET
Trigger: GGTCTCAGAAGAAGGGGCCCAAGTCAAATGGCTGAA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTCAATGGTCAGTTTGTaGACCCGGCCTATATGGGAC +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSMVSL*TRPIWD
Trigger: GTCCCATATAGGCCGGGTCCACAAACTGACCATTGA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATTGACCTCCATGAAGTaGAGCTTGGCAGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSLTSMK*SLADRL
Trigger: CAACCTGTCTGCCAAGCTCCACTTCATGGAGGTCAA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTTGACCTCCATGAAGTaGAGCTTGGCAGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVLTSMK*SLADRL
Trigger: CAACCTGTCTGCCAAGCTCCACTTCATGGAGGTCAA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCCGGGACAATCCAAGTaGATCTTGGGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTPGQSK*ILGGSC
Trigger: GCAGGAACCTCCCAAGATCCACTTGGATTGTCCCGG...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAACAACCACAATaGTGTCTGGTGTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTQQQPQ*CLVCCR
Trigger: CCGGCAGCACACCAGACACCATTGTGGTTGTTGCTG...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCATCCTGGGGAGGACTTaGCTTGTCCACAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSILGRT*LVHNLQ
Trigger: CTGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGAT...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCCGGCAGCTTTGTCACTaGAACCCACCATGTTATGGC +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSRQLCH*NPPCYG
Trigger: GCCATAACATGGTGGGTTCCAGTGACAAAGCTGCCG...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACGCCCTGCAAGTTGGTaGCCCTGCAGACATAGACAC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSERPASW*PCRHRH
Trigger: GTGTCTATGTCTGCAGGGCCACCAACTTGCAGGGCG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTCGCCCTGCAAGTTaGTGGCCCTGCAGACATAGA +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEPRPAS*WPCRHR
Trigger: TCTATGTCTGCAGGGCCACCAACTTGCAGGGCGAGG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAAGGTGCCTCCAGCTTTaGGTCCCTCCGGAAATCTCT +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSERCLQL*VPPEIS
Trigger: AGAGATTTCCGGAGGGACTCAAAGCTGGAGGCACCT...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111430.10
CDS-3UTR TCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCCCTCATCAGCAGGTGTaGCATCGTCAATGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSPHQQV*HRQWSV
Trigger: AACTGACCATTGACGATGTCACACCTGCTGATGAGG...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCACTCCAGAGCCACATTaGAACCCCAAGTCTCAACGA +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSTPEPH*NPKSQR
Trigger: TCGTTGAGACTTGGGGTTTCAATGTGGCTCTGGAGT...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAAGGGGCAGGGTTTCCTaGTCTCCAGGGTCAATACTC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSERGRVS*SPGSIL
Trigger: GAGTATTGACCCTGGAGATCAGGAAACCCTGCCCCT...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCACGAAGATGTACTTGCTaGCACTCATCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSRRCTC*HSSGSP
Trigger: AGGAGATCCAGATGAGTGGCAGCAAGTACATCTTCG...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCTACTGCATAGTGTCCTaGATCCTCCAGGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSYCIVS*ILQGCF
Trigger: GAAGCAACCCTGGAGGATGCAGGACACTATGCAGTA...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTATGGGACACCTTTATaGGGTTGTCAGGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVYGTPL*GCQAPV
Trigger: AACTGGTGCCTGACAACCGCATAAAGGTGTCCCATA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAATCTTGGGAGGTTCCTaGCTAGGCACAAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSILGGS*LGTKSI
Trigger: GATTGACTTTGTGCCTAGGCAGGAACCTCCCAAGAT...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTATCTTGGGAGGTTCCTaGCTAGGCACAAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVILGGS*LGTKSI
Trigger: GATTGACTTTGTGCCTAGGCAGGAACCTCCCAAGAT...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATGGAGCCGTGGTCGTTaGAGTATCTCCTGCACTGTC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEWSRGR*SISCTV
Trigger: GACAGTGCAGGAGATACTGCAACGACCACGGCTCCA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGGGTCAATACTCCCTaGTTGCAGAACATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSRVNTP*LQNMRK
Trigger: CTTCCGCATGTTCTGCAAGCAGGGAGTATTGACCCT...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTTTCTTCCAACTCAGTaGCTGGAGCAGGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVFLPTQ*LEQGLL
Trigger: AAGAAGTCCCTGCTCCAGCCACTGAGTTGGAAGAAA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTCTGTGACTCCGTGCTaGAAGGCGATGCGCTCATAT +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTSVTPC*KAMRSY
Trigger: ATATGAGCGCATCGCCTTCCAGCACGGAGTCACAGA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAAGGTCCGCGATGCTTTaGTATACCTCCAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSRSAML*YTSNFF
Trigger: GAAGAAGTTGGAGGTATACCAAAGCATCGCGGACCT...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCAGGTCCGCGATGCTTTaGTATACCTCCAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFRSAML*YTSNFF
Trigger: GAAGAAGTTGGAGGTATACCAAAGCATCGCGGACCT...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTGGACCCGGCCTATATaGGACACCTTTATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTWTRPI*DTFMRL
Trigger: CAACCGCATAAAGGTGTCCCATATAGGCCGGGTCCA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATCGGAGCATCCCTCCTaGCAGTACTCCACGCTGTAT +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSESEHPS*QYSTLY
Trigger: ATACAGCGTGGAGTACTGCCAGGAGGGATGCTCCGA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAACGATCCGGATATCCTaGGGAGGACTTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSETIRIS*GGLGLS
Trigger: GGACAAGCCAAGTCCTCCCCAGGATATCCGGATCGT...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCACCATGTTATGGCTaGAGACCCGGAAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEPPCYG*RPGSSS
Trigger: GCTACTACTTCCGGGTCTTCAGCCATAACATGGTGG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCACTCGAAGATGTACTTaGTGCCACTCATCTGGATCT +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFTRRCT*CHSSGS
Trigger: AGATCCAGATGAGTGGCAGCAAGTACATCTTCGAGT...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCACTCGAAGATGTACTTaGTGCCACTCATCTGGATCT +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFTRRCT*CHSSGS
Trigger: AGATCCAGATGAGTGGCAGCAAGTACATCTTCGAGT...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTGCATCCTCCAGGGTTaGTTCATTGATGATCAAGTG +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFCILQG*FIDDQV
Trigger: CACTTGATCATCAATGAAGCAACCCTGGAGGATGCA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTCCAACTTCTTCTCTTaGACAATGAGCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSNFFS*TMSSAS
Trigger: ACTGGCTGAGCTCATTGTGCAAGAGAAGAAGTTGGA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTCCAACTTCTTCTCTTaGACAATGAGCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSNFFS*TMSSAS
Trigger: ACTGGCTGAGCTCATTGTGCAAGAGAAGAAGTTGGA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTGTGTTACAGTCTTCTaGCAGACCACAGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTCVTVF*QTTVGA
Trigger: TGCTCCCACTGTGGTCTGGCAGAAGACTGTAACACA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTTCATCTTCCTTCTCTaGCCCTTCGACTGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFFIFLL*PFDCKD
Trigger: GTCTTTACAGTCGAAGGGGCAGAGAAGGAAGATGAA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGCTCTTTTTCTTCTTaGGCTCCAGGATGTATCCCA +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSSFSS*APGCIP
Trigger: TGGGATACATCCTGGAGCGCAAGAAGAAAAAGAGCT...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACTGCAGGATCAGCGTTaGCTTGTCCTCCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSELQDQR*LVLHVL
Trigger: GAGAACATGGAGGACAAGGCAACGCTGATCCTGCAG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCGATGGCATTATAGCCTaGAATGATGGAGCGATTTGC +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFDGIIA*NDGAIC
Trigger: GCAAATCGCTCCATCATTGCAGGCTATAATGCCATC...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCGATGGCATTATAGCCTaGAATGATGGAGCGATTTGC +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFDGIIA*NDGAIC
Trigger: GCAAATCGCTCCATCATTGCAGGCTATAATGCCATC...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACACTGGTTTCTTCCCTaGCTCCGGCATCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEHWFLP*LRHLEN
Trigger: GTTCTCAAGATGCCGGAGCCAGGGAAGAAACCAGTG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATTCCAACTCAGTGGCTaGAGCAGGGACTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEFQLSG*SRDFFG
Trigger: CCCAAAGAAGTCCCTGCTCCAGCCACTGAGTTGGAA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATCTGTGACTCCGTGCTaGAAGGCGATGCGCTCATAT +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSESVTPC*KAMRSY
Trigger: ATATGAGCGCATCGCCTTCCAGCACGGAGTCACAGA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTTGCTGCCACTCATCTaGATCTCCTGTCCATTCTTA +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFLLPLI*ISCPFL
Trigger: TAAGAATGGACAGGAGATCCAGATGAGTGGCAGCAA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTCAATGGTCAGTTTGTaGACCCGGCCTATATGGGAC +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTSMVSL*TRPIWD
Trigger: GTCCCATATAGGCCGGGTCCACAAACTGACCATTGA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAAACCACAATGGTGTCTaGTGTGCTGCCGGGACAATC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSENHNGV*CAAGTI
Trigger: GATTGTCCCGGCAGCACACCAGACACCATTGTGGTT...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACAACTTTCTTCTGGATaGTCTGGCGCAGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEQLSSG*SGAGVW
Trigger: CCAGACACCTGCGCCAGACCATCCAGAAGAAAGTTG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATCCCCAACTTTCTTCTaGATGGTCTGGCGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSESPTFF*MVWRRC
Trigger: ACACCTGCGCCAGACCATCCAGAAGAAAGTTGGGGA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATCTTGGAATAAAGACTaGCTCCTTGGTGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSESWNKD*LLGGGS
Trigger: GCTGCCGCCACCAAGGAGCCAGTCTTTATTCCAAGA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTGTGATGCCTGGTCTTaGAATAAAGACTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: EAHTLYAPSINIILRVSFCDAWS*NKDWLL
Trigger: AAGGAGCCAGTCTTTATTCCAAGACCAGGCATCACA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAGATCCAGGCCATTCTTaGACCAGGAAATCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEDPGHS*TRKSWA
Trigger: AGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGATC...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTCTTCTGAAAGGCTGTaGTCTTCTTTTCATCCTGCT +
Preference number: 4 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSSERL*SSFHPA
Trigger: AGCAGGATGAAAAGAAGAGCACAGCCTTTCAGAAGA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCGAAGATGTACTTGCTaGCACTCATCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTRRCTC*HSSGSP
Trigger: AGGAGATCCAGATGAGTGGCAGCAAGTACATCTTCG...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTATGGGACACCTTTATaGGGTTGTCAGGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTYGTPL*GCQAPV
Trigger: AACTGGTGCCTGACAACCGCATAAAGGTGTCCCATA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCGATGGCATTATAGCCTaGAATGATGGAGCGATTTGC +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSDGIIA*NDGAIC
Trigger: GCAAATCGCTCCATCATTGCAGGCTATAATGCCATC...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATCAATACTCCCTGCTTaGAGAACATGCGGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSESILPA*RTCGSE
Trigger: CTCGCTTCCGCATGTTCTGCAAGCAGGGAGTATTGA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAAGGGTCAATACTCCCTaGTTGCAGAACATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSERVNTP*LQNMRK
Trigger: CTTCCGCATGTTCTGCAAGCAGGGAGTATTGACCCT...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATTCAGCCATTTGACTTaGGCCCCTTCTTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEFSHLT*APSSET
Trigger: GGTCTCAGAAGAAGGGGCCCAAGTCAAATGGCTGAA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCGCGTACATTCTCATCTaGAACCTCACACTTAAACAC +
Preference number: 4 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSAYILI*NLTLKH
Trigger: GTGTTTAAGTGTGAGGTTTCAGATGAGAATGTACGC...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTGCATCCTCCAGGGTTaGTTCATTGATGATCAAGTG +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTCILQG*FIDDQV
Trigger: CACTTGATCATCAATGAAGCAACCCTGGAGGATGCA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCAGCTCTTTTTCTTCTTaGGCTCCAGGATGTATCCCA +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTSSFSS*APGCIP
Trigger: TGGGATACATCCTGGAGCGCAAGAAGAAAAAGAGCT...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTTGCTGCCACTCATCTaGATCTCCTGTCCATTCTTA +
Preference number: 4 (lower is better)
Translates to: TLYAPSINIILRVSFFRTLLPLI*ISCPFL
Trigger: TAAGAATGGACAGGAGATCCAGATGAGTGGCAGCAA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR GCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATTCATCTTCCTTCTCTaGCCCTTCGACTGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEFIFLL*PFDCKD
Trigger: GTCTTTACAGTCGAAGGGGCAGAGAAGGAAGATGAA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATTGCTGCCACTCATCTaGATCTCCTGTCCATTCTTA +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSELLPLI*ISCPFL
Trigger: TAAGAATGGACAGGAGATCCAGATGAGTGGCAGCAA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATGTGATGCCTGGTCTTaGAATAAAGACTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSECDAWS*NKDWLL
Trigger: AAGGAGCCAGTCTTTATTCCAAGACCAGGCATCACA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR TCA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAGCGTACATTCTCATCTaGAACCTCACACTTAAACAC +
Preference number: 4 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEAYILI*NLTLKH
Trigger: GTGTTTAAGTGTGAGGTTTCAGATGAGAATGTACGC...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 90 bp GGCGGTGATGTCGCTGCCATCCCGCTGCCACCGCACCTTCACGCCTaGCCGCTCCGTCTCAGCCTCGAACACGGCAGCACTGCCAGCGGT +
Preference number: 5 (lower is better)
Translates to: GGDVAAIPLPPHLHA*PLRLSLEHGSTASG
Trigger: ACCGCTGGCAGTGCTGCCGTGTTCGAGGCTGAGACGGAGCGGTCAGGCGTGAAGGTGCGGTGGCAGCGGGATGGCAGCGACATCACCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS TCA 90 bp CTGTCACCTGGTAGGTGCCCGAGTGGGTGCGGCGGGCAGCTCGGATaGACAAGATCGTGTCTGTGGGGCTGTTCCGGATGCTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: LSPGRCPSGCGGQLG*TRSCLWGCSGCSPP
Trigger: AGGAGGTGAGCATCCGGAACAGCCCCACAGACACGATCTTGTTCATCCGAGCTGCCCGCCGCACCCACTCGGGCACCTACCAGGTGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 90 bp GCCAAACCATACTTGTCATTGGCGGTGATGTCGCTGCCATCCCGCTaGCACCGCACCTTCACGCCTGACCGCTCCGTCTCAGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: AKPYLSLAVMSLPSR*HRTFTPDRSVSASN
Trigger: GTTCGAGGCTGAGACGGAGCGGTCAGGCGTGAAGGTGCGGTGGCAGCGGGATGGCAGCGACATCACCGCCAATGACAAGTATGGTTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS GCA 90 bp GTGGGTAGGTCCTTCACCAGCATCGATGTGCGCTCTGTCAGCCCCTaGAGAGCAGGTGTCCACTCGGAGCATCCCTCCTGGCAGTACTCC +
Preference number: 5 (lower is better)
Translates to: VGRSFTSIDVRSVSP*RAGVHSEHPSWQYS
Trigger: GGAGTACTGCCAGGAGGGATGCTCCGAGTGGACACCTGCTCTGCAGGGGCTGACAGAGCGCACATCGATGCTGGTGAAGGACCTACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 90 bp CTGCACTGTCACAGGCTCCTTGGTGACGATAGGGCCTCCAGGACCTaGCACATTGTGTGCCCGTACTCGGAACAGCAGCCGTGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: LHCHRLLGDDRASRT*HIVCPYSEQQPCPS
Trigger: ACTGGGGCACGGCTGCTGTTCCGAGTACGGGCACACAATGTGGCAGGTCCTGGAGGCCCTATCGTCACCAAGGAGCCTGTGACAGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 90 bp CTGCCACATTGTGTGCCCGTACTCGGAACAGCAGCCGTGCCCCAGTaGGTAGGTCCTTCACCAGCATCGATGTGCGCTCTGTCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: LPHCVPVLGTAAVPQ*VGPSPASMCALSAP
Trigger: AGGGGCTGACAGAGCGCACATCGATGCTGGTGAAGGACCTACCCACTGGGGCACGGCTGCTGTTCCGAGTACGGGCACACAATGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 90 bp GCACCTCCAGGCGGCACTCACACTGTGCCTCGCCCTGCAAGTTGGTaGCCCTGCAGACATAGACACCACCATCATAGGGGCAGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: APPGGTHTVPRPASW*PCRHRHHHHRGRVS
Trigger: GGAAACCCTGCCCCTATGATGGTGGTGTCTATGTCTGCAGGGCCACCAACTTGCAGGGCGAGGCACAGTGTGAGTGCCGCCTGGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 90 bp TGTGTCGCTTGCCCTCTGCTGCCAAACCATACTTGTCATTGGCGGTaGTGTCGCTGCCATCCCGCTGCCACCGCACCTTCACGCCTGACC +
Preference number: 5 (lower is better)
Translates to: CVACPLLPNHTCHWR*CRCHPAATAPSRLT
Trigger: GGTCAGGCGTGAAGGTGCGGTGGCAGCGGGATGGCAGCGACATCACCGCCAATGACAAGTATGGTTTGGCAGCAGAGGGCAAGCGACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS TCA 90 bp CCACCACACACTGGTAGGCTGCGTCGTCAGCCAGTGAGCACTGGCTaGTGGTCAGGGTGCGCTTGGCACCGACGGACTCGAAGATGTACT +
Preference number: 5 (lower is better)
Translates to: PPHTGRLRRQPVSTG*WSGCAWHRRTRRCT
Trigger: AGTACATCTTCGAGTCCGTCGGTGCCAAGCGCACCCTGACCATCAGCCAGTGCTCACTGGCTGACGACGCAGCCTACCAGTGTGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 90 bp CGCAGGTGTCTGGGCAGTTGGAGCCGTGGTCGTTGCAGTATCTCCTaGACTGTCACAGGCTCCTTGGTGACGATAGGGCCTCCAGGACCT +
Preference number: 5 (lower is better)
Translates to: RRCLGSWSRGRCSIS*TVTGSLVTIGPPGP
Trigger: AGGTCCTGGAGGCCCTATCGTCACCAAGGAGCCTGTGACAGTGCAGGAGATACTGCAACGACCACGGCTCCAACTGCCCAGACACCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 90 bp ACTGGTTCTCCGACCTGCTCCCGCCAGGCTCGTGCGTCGGAAAGCTaGTCTGAGGTCCAGGTCTCCAGAACCAATGGCCTCATGGACAGT +
Preference number: 5 (lower is better)
Translates to: TGSPTCSRQARASES*SEVQVSRTNGLMDS
Trigger: ACTGTCCATGAGGCCATTGGTTCTGGAGACCTGGACCTCAGATCAGCTTTCCGACGCACGAGCCTGGCGGGAGCAGGTCGGAGAACCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 90 bp AGGGCTCGCATCCCGCACTGTCAGTGTGTGTCGCTTGCCCTCTGCTaGCAAACCATACTTGTCATTGGCGGTGATGTCGCTGCCATCCCG +
Preference number: 5 (lower is better)
Translates to: RARIPHCQCVSLALC*QTILVIGGDVAAIP
Trigger: CGGGATGGCAGCGACATCACCGCCAATGACAAGTATGGTTTGGCAGCAGAGGGCAAGCGACACACACTGACAGTGCGGGATGCGAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS GCA 90 bp CCACAATCTGCAGGATCAGCGTTGCCTTGTCCTCCATGTTCTCAATaGGAACTGTCACCTGGTAGGTGCCCGAGTGGGTGCGGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: PQSAGSALPCPPCSQ*ELSPGRCPSGCGGQ
Trigger: CTGCCCGCCGCACCCACTCGGGCACCTACCAGGTGACAGTTCGCATTGAGAACATGGAGGACAAGGCAACGCTGATCCTGCAGATTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 90 bp GGGATGAGGAGGTTCACAGGCTCCCCAACTTTCTTCTGGATGGTCTaGCGCAGGTGTCTGGGCAGTTGGAGCCGTGGTCGTTGCAGTATC +
Preference number: 5 (lower is better)
Translates to: GMRRFTGSPTFFWMV*RRCLGSWSRGRCSI
Trigger: GATACTGCAACGACCACGGCTCCAACTGCCCAGACACCTGCGCCAGACCATCCAGAAGAAAGTTGGGGAGCCTGTGAACCTCCTCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGATGGTCAGGGTGCGCTaGGCACCGACGGACTCGAAG +
Preference number: 5 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILMVRVR*APTDSK
Trigger: CTTCGAGTCCGTCGGTGCCAAGCGCACCCTGACCAT...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 90 bp CTCTGGAGGGGCTGGCTCTGTGACCTTGAGGTCAAACTTGACCTTTaGGGAGCCTGCAATGACCGCGTAGGAACCCTGGTCATCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LWRGWLCDLEVKLDL*GACNDRVGTLVIRA
Trigger: AGCCCTGATGACCAGGGTTCCTACGCGGTCATTGCAGGCTCCTCAAAGGTCAAGTTTGACCTCAAGGTCACAGAGCCAGCCCCTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS TCA 90 bp TGTGGTCGCATCAGAAAGAGGCCAATAGGGTCATCAGGGGCTCCCTaGTGCTCTGCAGCTGAGCCATCCTGGGTTACCGAGACTGACCCT +
Preference number: 5 (lower is better)
Translates to: CGRIRKRPIGSSGAP*CSAAEPSWVTETDP
Trigger: AGGGTCAGTCTCGGTAACCCAGGATGGCTCAGCTGCAGAGCATCAGGGAGCCCCTGATGACCCTATTGGCCTCTTTCTGATGCGACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS TCA 90 bp TCGAAGGTCTGTGACTCCGTGCTGGAAGGCGATGCGCTCATATTCTaGCGGCGGTGCCTGTCTCAGGATCTCCCACACGTCTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SKVCDSVLEGDALIF*RRCLSQDLPHVFFS
Trigger: GCTGAAGAAGACGTGTGGGAGATCCTGAGACAGGCACCGCCGTCAGAATATGAGCGCATCGCCTTCCAGCACGGAGTCACAGACCTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 90 bp ATCAGGGCTCGCATCCCGCACTGTCAGTGTGTGTCGCTTGCCCTCTaGTGCCAAACCATACTTGTCATTGGCGGTGATGTCGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: IRARIPHCQCVSLAL*CQTILVIGGDVAAI
Trigger: GATGGCAGCGACATCACCGCCAATGACAAGTATGGTTTGGCAGCAGAGGGCAAGCGACACACACTGACAGTGCGGGATGCGAGCCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS GCA 90 bp GGGTGTGGCCCAGTTGAGGCCTTCTTCCCCTGTGTTACAGTCTTCTaGCAGACCACAGTGGGAGCAGGGTCTCCAGAAATAGGGACATCC +
Preference number: 5 (lower is better)
Translates to: GCGPVEAFFPCVTVF*QTTVGAGSPEIGTS
Trigger: GGATGTCCCTATTTCTGGAGACCCTGCTCCCACTGTGGTCTGGCAGAAGACTGTAACACAGGGGAAGAAGGCCTCAACTGGGCCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 90 bp TCACAGGCTCCCCAACTTTCTTCTGGATGGTCTGGCGCAGGTGTCTaGGCAGTTGGAGCCGTGGTCGTTGCAGTATCTCCTGCACTGTCA +
Preference number: 5 (lower is better)
Translates to: SQAPQLSSGWSGAGV*AVGAVVVAVSPALS
Trigger: TGACAGTGCAGGAGATACTGCAACGACCACGGCTCCAACTGCCCAGACACCTGCGCCAGACCATCCAGAAGAAAGTTGGGGAGCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGGGAGCAGGGACTTCTTaGGGGGCTCCTGGAGCAACT +
Preference number: 5 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILGAGTS*GAPGAT
Trigger: AGTTGCTCCAGGAGCCCCCAAAGAAGTCCCTGCTCC...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CCA 90 bp TTCTTCCAACTCAGTGGCTGGAGCAGGGACTTCTTTGGGGGCTCCTaGAGCAACTTCAGATTCTGCCTTCTCTGGAGGGGCTGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: FFQLSGWSRDFFGGS*SNFRFCLLWRGWLC
Trigger: ACAGAGCCAGCCCCTCCAGAGAAGGCAGAATCTGAAGTTGCTCCAGGAGCCCCCAAAGAAGTCCCTGCTCCAGCCACTGAGTTGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCAAGACGCTGCGGTCTTaGGTGGTCTCCACCCGGACC +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCKTLRS*VVSTRT
Trigger: GGTCCGGGTGGAGACCACCAAAGACCGCAGCGTCTT...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCAGGTGTCTGGGCAGTaGGAGCCGTGGTCGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCQVSGQ*EPWSLQ
Trigger: CTGCAACGACCACGGCTCCAACTGCCCAGACACCTG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 90 bp TGGAGCAGGGACTTCTTTGGGGGCTCCTGGAGCAACTTCAGATTCTaGCTTCTCTGGAGGGGCTGGCTCTGTGACCTTGAGGTCAAACTT +
Preference number: 5 (lower is better)
Translates to: WSRDFFGGSWSNFRF*LLWRGWLCDLEVKL
Trigger: AAGTTTGACCTCAAGGTCACAGAGCCAGCCCCTCCAGAGAAGGCAGAATCTGAAGTTGCTCCAGGAGCCCCCAAAGAAGTCCCTGCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS GCA 90 bp CTTAGGACTACCTCGGACAGCACAGCAGAGGATGGCATTATAGCCTaGAATGATGGAGCGATTTGCCAAGGGCTGGGTGAAGCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: LRTTSDSTAEDGIIA*NDGAICQGLGEAWG
Trigger: GCCCCAAGCTTCACCCAGCCCTTGGCAAATCGCTCCATCATTGCAGGCTATAATGCCATCCTCTGCTGTGCTGTCCGAGGTAGTCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 90 bp CCGAGACTGACCCTTCAGGACTTGAGACACTTTCTTCCAACTCAGTaGCTGGAGCAGGGACTTCTTTGGGGGCTCCTGGAGCAACTTCAG +
Preference number: 5 (lower is better)
Translates to: PRLTLQDLRHFLPTQ*LEQGLLWGLLEQLQ
Trigger: CTGAAGTTGCTCCAGGAGCCCCCAAAGAAGTCCCTGCTCCAGCCACTGAGTTGGAAGAAAGTGTCTCAAGTCCTGAAGGGTCAGTCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCGGAGCAGGGACTTCTTaGGGGGCTCCTGGAGCAACT +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCGAGTS*GAPGAT
Trigger: AGTTGCTCCAGGAGCCCCCAAAGAAGTCCCTGCTCC...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCACCTTGACTGTGAGGTaGACCTGGTCCTCGCCCACG +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCTLTVR*TWSSPT
Trigger: CGTGGGCGAGGACCAGGTCAACCTCACAGTCAAGGT...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTCTGGGGGCCGCCACTaGAGTGAGACAGTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCSGGRH*SETVVS
Trigger: AGACACCACTGTCTCACTCAAGTGGCGGCCCCCAGA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACCAGGTGTCTGGGCAGTaGGAGCCGTGGTCGTTGCAG +
Preference number: 5 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHQVSGQ*EPWSLQ
Trigger: CTGCAACGACCACGGCTCCAACTGCCCAGACACCTG...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGCCCCAGATCTCTGTATaGCCATCATCTTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILPQISV*PSSWGG
Trigger: GCCACCCCAAGATGATGGCAATACAGAGATCTGGGG...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCAGGTGCCTCCAGCTTaGAGTCCCTCCGGAAACTGC +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCQVPPA*SPSGNC
Trigger: GCAGTTTCCGGAGGGACTCAAAGCTGGAGGCACCTG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137942.8
CDS CCA 90 bp TTGAGACACTTTCTTCCAACTCAGTGGCTGGAGCAGGGACTTCTTTaGGGGCTCCTGGAGCAACTTCAGATTCTGCCTTCTCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LRHFLPTQWLEQGLL*GLLEQLQILPSLEG
Trigger: CCCCTCCAGAGAAGGCAGAATCTGAAGTTGCTCCAGGAGCCCCCAAAGAAGTCCCTGCTCCAGCCACTGAGTTGGAAGAAAGTGTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CCA 90 bp AACACAGCCTGGTCCTTGGCTCCCACTGCCAGGTCCGCGATGCTTTaGTATACCTCCAACTTCTTCTCTTGCACAATGAGCTCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: NTAWSLAPTARSAML*YTSNFFSCTMSSAS
Trigger: ACTGGCTGAGCTCATTGTGCAAGAGAAGAAGTTGGAGGTATACCAAAGCATCGCGGACCTGGCAGTGGGAGCCAAGGACCAGGCTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 90 bp TCCAGAGCCACATTGAAACCCCAAGTCTCAACGATCCGGATATCCTaGGGAGGACTTGGCTTGTCCACAATCTGCAGGATCAGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: SRATLKPQVSTIRIS*GGLGLSTICRISVA
Trigger: GGCAACGCTGATCCTGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGATATCCGGATCGTTGAGACTTGGGGTTTCAATGTGGCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 90 bp ATAGCCTGCAATGATGGAGCGATTTGCCAAGGGCTGGGTGAAGCTTaGGGCCTCAGAGAAGTCCAGGGCCTTGTATTTGGGTGGCTCATA +
Preference number: 5 (lower is better)
Translates to: IACNDGAICQGLGEA*GLREVQGLVFGWLI
Trigger: TATGAGCCACCCAAATACAAGGCCCTGGACTTCTCTGAGGCCCCAAGCTTCACCCAGCCCTTGGCAAATCGCTCCATCATTGCAGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGCCATCCTTCAGCCATTaGACTTGGGCCCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILPSFSH*TWAPSS
Trigger: AGAAGAAGGGGCCCAAGTCAAATGGCTGAAGGATGG...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGGACACCTTTATGCGGTaGTCAGGCACCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILDTFMR*SGTSSF
Trigger: GAAGGAACTGGTGCCTGACAACCGCATAAAGGTGTC...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTTGGTGGCGGCAGCTTaGTCACTGGAACCCACCATG +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCLVAAA*SLEPTM
Trigger: CATGGTGGGTTCCAGTGACAAAGCTGCCGCCACCAA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCAGGTGCCTCCAGCTTaGAGTCCCTCCGGAAACTGT +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCQVPPA*SPSGNC
Trigger: ACAGTTTCCGGAGGGACTCAAAGCTGGAGGCACCTG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169776.2
CDS TCA 90 bp ACACCTCACAGCGGTAGCCCCCAGCAGAAGTGGTCTGAGCATCTGTaGTGTGCAACTCAAACAAGTAGACCTTGCTGGCTCTGTCATAGC +
Preference number: 5 (lower is better)
Translates to: TPHSGSPQQKWSEHL*CATQTSRPCWLCHS
Trigger: GCTATGACAGAGCCAGCAAGGTCTACTTGTTTGAGTTGCACATCACAGATGCTCAGACCACTTCTGCTGGGGGCTACCGCTGTGAGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 90 bp CAGTTCCTTCCCATTCTTCAGCCACACGCCGCGTACATTCTCATCTaGAACCTCACACTTAAACACAGCCTGGTCCTTGGCTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: QFLPILQPHAAYILI*NLTLKHSLVLGSHC
Trigger: GCAGTGGGAGCCAAGGACCAGGCTGTGTTTAAGTGTGAGGTTTCAGATGAGAATGTACGCGGCGTGTGGCTGAAGAATGGGAAGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 90 bp TCTGGTGTGCTGCCGGGACAATCCAAGTGGATCTTGGGAGGTTCCTaGCTAGGCACAAAGTCAATCTTGACCTCCATGAAGTGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: SGVLPGQSKWILGGS*LGTKSILTSMKWSL
Trigger: CAAGCTCCACTTCATGGAGGTCAAGATTGACTTTGTGCCTAGGCAGGAACCTCCCAAGATCCACTTGGATTGTCCCGGCAGCACACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 90 bp ATCCTGGGGAGGACTTGGCTTGTCCACAATCTGCAGGATCAGCGTTaGCTTGTCCTCCATGTTCTCAATGCGAACTGTCACCTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: ILGRTWLVHNLQDQR*LVLHVLNANCHLVG
Trigger: ACCTACCAGGTGACAGTTCGCATTGAGAACATGGAGGACAAGGCAACGCTGATCCTGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACAGCTTGGCAGACAGGTaGCAGGCAAACCCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHSLADR*QANPSG
Trigger: CCCTGAAGGGTTTGCCTGCAACCTGTCTGCCAAGCT...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTCCATGAAGTGGAGCTaGGCAGACAGGTTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCSMKWS*ADRLQA
Trigger: TGCCTGCAACCTGTCTGCCAAGCTCCACTTCATGGA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGGGCACAAAGTCAATCTaGACCTCCATGAAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILGTKSI*TSMKWS
Trigger: GCTCCACTTCATGGAGGTCAAGATTGACTTTGTGCC...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTTGGTGGCGGCAGCTTaGTCACTGGAACCCACCATG +
Preference number: 5 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHLVAAA*SLEPTM
Trigger: CATGGTGGGTTCCAGTGACAAAGCTGCCGCCACCAA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGGAGAAGTCCAGGGCCTaGTATTTGGGTGGCTCATAT +
Preference number: 5 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILEKSRA*YLGGSY
Trigger: ATATGAGCCACCCAAATACAAGGCCCTGGACTTCTC...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 90 bp TCTCAGGATCTCCCACACGTCTTCTTCAGCAGGTGCCTCCAGCTTTaGGTCCCTCCGGAAATCTCTCTTCTTCAGCAGGGAACTAAAGTC +
Preference number: 5 (lower is better)
Translates to: SQDLPHVFFSRCLQL*VPPEISLLQQGTKV
Trigger: GACTTTAGTTCCCTGCTGAAGAAGAGAGATTTCCGGAGGGACTCAAAGCTGGAGGCACCTGCTGAAGAAGACGTGTGGGAGATCCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111430.10
CDS TCA 90 bp GGTCCGCGATGCTTTGGTATACCTCCAACTTCTTCTCTTGCACAATaGGCTCAGCCAGTGACTGGCCTCCACTTGTGCGTACTGCATAGT +
Preference number: 5 (lower is better)
Translates to: GPRCFGIPPTSSLAQ*AQPVTGLHLCVLHS
Trigger: ACTATGCAGTACGCACAAGTGGAGGCCAGTCACTGGCTGAGCTCATTGTGCAAGAGAAGAAGTTGGAGGTATACCAAAGCATCGCGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 90 bp TCTCAGGATCTCCCACACGTCTTCTTCAGCAGGTGCCTCCAGCTTTaGGTCCCTCCGGAAACTGTCTCTCTTCTTCAGCAGGGAACTAAA +
Preference number: 5 (lower is better)
Translates to: SQDLPHVFFSRCLQL*VPPETVSLLQQGTK
Trigger: TTTAGTTCCCTGCTGAAGAAGAGAGACAGTTTCCGGAGGGACTCAAAGCTGGAGGCACCTGCTGAAGAAGACGTGTGGGAGATCCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169776.2
CDS GCA 90 bp GGGGTTCTTTACTGTGACTGTGTAGACACCTTCATCTTCCTTCTCTaGCCCTTCGACTGTAAAGACGCTGCGGTCTTTGGTGGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: GVLYCDCVDTFIFLL*PFDCKDAAVFGGLH
Trigger: GTGGAGACCACCAAAGACCGCAGCGTCTTTACAGTCGAAGGGGCAGAGAAGGAAGATGAAGGTGTCTACACAGTCACAGTAAAGAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 90 bp GGTGAAGCTTGGGGCCTCAGAGAAGTCCAGGGCCTTGTATTTGGGTaGCTCATATGTGATGCCTGGTCTTGGAATAAAGACTGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: GEAWGLREVQGLVFG*LICDAWSWNKDWLL
Trigger: AAGGAGCCAGTCTTTATTCCAAGACCAGGCATCACATATGAGCCACCCAAATACAAGGCCCTGGACTTCTCTGAGGCCCCAAGCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TGGTACACAGCCTGGCATCCATTTGTACCTAGCCATCTCTGGGGAGCCATCCTGTTCCGCCCATCTTTCTaGAACCGGTATTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: WYTAWHPFVPSHLWGAILFRPSF*NRYLKV
Trigger: GACCTTCAAATACCGGTTCAAGAAAGATGGGCGGAA...CAGGATGGCTCCCCAGAGATGGCTAGGTACAAATGGATGCCAGGCTGTGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCGACACCTTTATGCGGTaGTCAGGCACCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCDTFMR*SGTSSF
Trigger: GAAGGAACTGGTGCCTGACAACCGCATAAAGGTGTC...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTCGTCAATGGTCAGTTaGTGGACCCGGCCTATATGG +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCSSMVS*WTRPIW
Trigger: CCATATAGGCCGGGTCCACAAACTGACCATTGACGA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACGGGACATCGATGACCTaGACTGTGAGGTTGACCTGG +
Preference number: 5 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHGTSMT*TVRLTW
Trigger: CCAGGTCAACCTCACAGTCAAGGTCATCGATGTCCC...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCACTCCAGAGCCACATaGAAACCCCAAGTCTCAACG +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCHSRAT*KPQVST
Trigger: CGTTGAGACTTGGGGTTTCAATGTGGCTCTGGAGTG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 90 bp TTGGTATACCTCCAACTTCTTCTCTTGCACAATGAGCTCAGCCAGTaGCTGGCCTCCACTTGTGCGTACTGCATAGTGTCCTGCATCCTC +
Preference number: 5 (lower is better)
Translates to: LVYLQLLLLHNELSQ*LASTCAYCIVSCIL
Trigger: GAGGATGCAGGACACTATGCAGTACGCACAAGTGGAGGCCAGTCACTGGCTGAGCTCATTGTGCAAGAGAAGAAGTTGGAGGTATACCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCGACCTTGGCTTCTTGTaGAAGGCTGACACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCDLGFL*KADTGF
Trigger: GAAACCAGTGTCAGCCTTCAACAAGAAGCCAAGGTC...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAAGGTGCTGGCCCACTTaGCTGCTCAGGTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSRCWPT*LLRSTH
Trigger: GTGGGTGGACCTGAGCAGCAAAGTGGGCCAGCACCT...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACCCATCCTTCAGCCATTaGACTTGGGCCCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHPSFSH*TWAPSS
Trigger: AGAAGAAGGGGCCCAAGTCAAATGGCTGAAGGATGG...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCCAGGTCCGCGATGCTTaGGTATACCTCCAACTTCTT +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCQVRDA*VYLQLL
Trigger: AAGAAGTTGGAGGTATACCAAAGCATCGCGGACCTG...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTAACACAGCCTGGTCCTaGGCTCCCACTGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVNTAWS*APTARS
Trigger: GGACCTGGCAGTGGGAGCCAAGGACCAGGCTGTGTT...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCAAGACGCTGCGGTCTTaGGTGGTCTCCACCCGGACC +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFKTLRS*VVSTRT
Trigger: GGTCCGGGTGGAGACCACCAAAGACCGCAGCGTCTT...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCCAGGTGTCTGGGCAGTaGGAGCCGTGGTCGTTGCAG +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFQVSGQ*EPWSLQ
Trigger: CTGCAACGACCACGGCTCCAACTGCCCAGACACCTG...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTCTGCAGGATCAGCGTaGCCTTGTCCTCCATGTTCT +
Preference number: 5 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHSAGSA*PCPPCS
Trigger: AGAACATGGAGGACAAGGCAACGCTGATCCTGCAGA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCAGATCCAGGCCATTCTaGAACCAGGAAATCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCRSRPF*NQEILG
Trigger: GCCCAAGATTTCCTGGTTCAAGAATGGCCTGGATCT...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 90 bp GCCTCCACTTGTGCGTACTGCATAGTGTCCTGCATCCTCCAGGGTTaGTTCATTGATGATCAAGTGGTGTTTCCGCCCATCTTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: ASTCAYCIVSCILQG*FIDDQVVFPPIFLE
Trigger: TTCAAGAAAGATGGGCGGAAACACCACTTGATCATCAATGAAGCAACCCTGGAGGATGCAGGACACTATGCAGTACGCACAAGTGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTGCTTCCGCCCATCTTTCTaGAACCGGTATTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: LSLGSVSSEPSRPAWCHCFRPSF*NRYLKV
Trigger: GACCTTCAAATACCGGTTCAAGAAAGATGGGCGGAA...GCAGTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACCAGGTCCGCGATGCTTaGGTATACCTCCAACTTCTT +
Preference number: 5 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHQVRDA*VYLQLL
Trigger: AAGAAGTTGGAGGTATACCAAAGCATCGCGGACCTG...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAACACAGCCTGGTCCTaGGCTCCCACTGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSNTAWS*APTARS
Trigger: GGACCTGGCAGTGGGAGCCAAGGACCAGGCTGTGTT...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCACCTTGACTGTGAGGTaGACCTGGTCCTCGCCCACG +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFTLTVR*TWSSPT
Trigger: CGTGGGCGAGGACCAGGTCAACCTCACAGTCAAGGT...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATCTGGGGGCCGCCACTaGAGTGAGACAGTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSSGGRH*SETVVS
Trigger: AGACACCACTGTCTCACTCAAGTGGCGGCCCCCAGA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTCTGGGGGCCGCCACTaGAGTGAGACAGTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSGGRH*SETVVS
Trigger: AGACACCACTGTCTCACTCAAGTGGCGGCCCCCAGA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTCCAGGGCCTTGTATTaGGGTGGCTCATATGTGATG +
Preference number: 5 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHSRALY*GGSYVM
Trigger: CATCACATATGAGCCACCCAAATACAAGGCCCTGGA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTTGAACCAGGAAATCTaGGGCTTAGGACTACCTCGG +
Preference number: 5 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHLNQEI*GLGLPR
Trigger: CCGAGGTAGTCCTAAGCCCAAGATTTCCTGGTTCAA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 90 bp ATGGCTGAAGACCCGGAAGTAGTAGCCATTGCCAATGATAAGCTCTaGTACCACACAGTGAGTGCGTCGGTAGTGTTCCAAAACCGTGAA +
Preference number: 5 (lower is better)
Translates to: MAEDPEVVAIANDKL*YHTVSASVVFQNRE
Trigger: TTCACGGTTTTGGAACACTACCGACGCACTCACTGTGTGGTATCAGAGCTTATCATTGGCAATGGCTACTACTTCCGGGTCTTCAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACCTGACCCTTCAGGACTaGAGACACTTTCTTCCAACT +
Preference number: 5 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHLTLQD*RHFLPT
Trigger: AGTTGGAAGAAAGTGTCTCAAGTCCTGAAGGGTCAG...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCAGGTGCTGGCCCACTTaGCTGCTCAGGTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTRCWPT*LLRSTH
Trigger: GTGGGTGGACCTGAGCAGCAAAGTGGGCCAGCACCT...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCATGGTCAGGGTGCGCTaGGCACCGACGGACTCGAAG +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTMVRVR*APTDSK
Trigger: CTTCGAGTCCGTCGGTGCCAAGCGCACCCTGACCAT...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGACCTGCCTGGTGTCACTTCTTGAACCGGTATTaGAAGGTCTCCTCACGTGTC +
Preference number: 5 (lower is better)
Translates to: TLSLGSVSSEPSRPAWCHFLNRY*KVSSRV
Trigger: GACACGTGAGGAGACCTTCAAATACCGGTTCAAGAA...GTGACACCAGGCAGGTCTGCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCAACACAGCCTGGTCCTaGGCTCCCACTGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTNTAWS*APTARS
Trigger: GGACCTGGCAGTGGGAGCCAAGGACCAGGCTGTGTT...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCAGCTTGGCAGACAGGTaGCAGGCAAACCCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSLADR*QANPSG
Trigger: CCCTGAAGGGTTTGCCTGCAACCTGTCTGCCAAGCT...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCAAGACGCTGCGGTCTTaGGTGGTCTCCACCCGGACC +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTKTLRS*VVSTRT
Trigger: GGTCCGGGTGGAGACCACCAAAGACCGCAGCGTCTT...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTGCCCTTGAACCACTaGACCACAGGCGGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFLPLNH*TTGGFR
Trigger: CCTGAAACCGCCTGTGGTCAAGTGGTTCAAGGGCAA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAAGGTGCTGGCCCACTTaGCTGCTCAGGTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: THFMLPVLTLSLGSVSSERCWPT*LLRSTH
Trigger: GTGGGTGGACCTGAGCAGCAAAGTGGGCCAGCACCT...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAATGGTCAGGGTGCGCTaGGCACCGACGGACTCGAAG +
Preference number: 5 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEMVRVR*APTDSK
Trigger: CTTCGAGTCCGTCGGTGCCAAGCGCACCCTGACCAT...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGCTTGGCAGACAGGTaGCAGGCAAACCCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSSLADR*QANPSG
Trigger: CCCTGAAGGGTTTGCCTGCAACCTGTCTGCCAAGCT...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTCCATGAAGTGGAGCTaGGCAGACAGGTTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSMKWS*ADRLQA
Trigger: TGCCTGCAACCTGTCTGCCAAGCTCCACTTCATGGA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCGGGACATCGATGACCTaGACTGTGAGGTTGACCTGG +
Preference number: 5 (lower is better)
Translates to: AHTLYAPSINIILRVSFFGTSMT*TVRLTW
Trigger: CCAGGTCAACCTCACAGTCAAGGTCATCGATGTCCC...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTGGGACATCGATGACCTaGACTGTGAGGTTGACCTGG +
Preference number: 5 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVGTSMT*TVRLTW
Trigger: CCAGGTCAACCTCACAGTCAAGGTCATCGATGTCCC...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCACCCCAGATCTCTGTATaGCCATCATCTTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSPQISV*PSSWGG
Trigger: GCCACCCCAAGATGATGGCAATACAGAGATCTGGGG...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTCCCCAGATCTCTGTATaGCCATCATCTTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVPQISV*PSSWGG
Trigger: GCCACCCCAAGATGATGGCAATACAGAGATCTGGGG...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGGTGCCTCCAGCTTaGAGTCCCTCCGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTQVPPA*SPSGNL
Trigger: GAGATTTCCGGAGGGACTCAAAGCTGGAGGCACCTG...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111430.10
CDS-3UTR CAA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCACCATCCTTCAGCCATTaGACTTGGGCCCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSPSFSH*TWAPSS
Trigger: AGAAGAAGGGGCCCAAGTCAAATGGCTGAAGGATGG...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATCGTCAATGGTCAGTTaGTGGACCCGGCCTATATGG +
Preference number: 5 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSSSMVS*WTRPIW
Trigger: CCATATAGGCCGGGTCCACAAACTGACCATTGACGA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTCTGCAGGATCAGCGTaGCCTTGTCCTCCATGTTCT +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSAGSA*PCPPCS
Trigger: AGAACATGGAGGACAAGGCAACGCTGATCCTGCAGA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATATCCTGGGGAGGACTaGGCTTGTCCACAATCTGCA +
Preference number: 5 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSYPGED*ACPQSA
Trigger: TGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGATA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTATCCTGGGGAGGACTaGGCTTGTCCACAATCTGCA +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFYPGED*ACPQSA
Trigger: TGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGATA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCCACTCCAGAGCCACATaGAAACCCCAAGTCTCAACG +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFHSRAT*KPQVST
Trigger: CGTTGAGACTTGGGGTTTCAATGTGGCTCTGGAGTG...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTTGGTGGCGGCAGCTTaGTCACTGGAACCCACCATG +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTLVAAA*SLEPTM
Trigger: CATGGTGGGTTCCAGTGACAAAGCTGCCGCCACCAA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTGTCAATACTCCCTGCTaGCAGAACATGCGGAAGCGA +
Preference number: 5 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVVNTPC*QNMRKR
Trigger: TCGCTTCCGCATGTTCTGCAAGCAGGGAGTATTGAC...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCGCTGACCTTGGCTTCTaGTTGAAGGCTGACACTGGT +
Preference number: 5 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSADLGF*LKADTG
Trigger: ACCAGTGTCAGCCTTCAACAAGAAGCCAAGGTCAGC...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCACCTTGAGGTCAAACTaGACCTTTGAGGAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFTLRSN*TFEEPA
Trigger: TGCAGGCTCCTCAAAGGTCAAGTTTGACCTCAAGGT...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTTGCCCTTGAACCACTaGACCACAGGCGGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTLPLNH*TTGGFR
Trigger: CCTGAAACCGCCTGTGGTCAAGTGGTTCAAGGGCAA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCCTGTCAAATTTGTCCTaGGTAGACACCTCACAGCGG +
Preference number: 5 (lower is better)
Translates to: AHTLYAPSINIILRVSFFLSNLS*VDTSQR
Trigger: CCGCTGTGAGGTGTCTACCAAGGACAAATTTGACAG...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCCTCCAACTTCTTCTCTaGCACAATGAGCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: AHTLYAPSINIILRVSFFLQLLL*HNELSQ
Trigger: CTGGCTGAGCTCATTGTGCAAGAGAAGAAGTTGGAG...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTCAGGTCCGCGATGCTTaGGTATACCTCCAACTTCTT +
Preference number: 5 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVQVRDA*VYLQLL
Trigger: AAGAAGTTGGAGGTATACCAAAGCATCGCGGACCTG...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCTCGTCAATGGTCAGTTaGTGGACCCGGCCTATATGG +
Preference number: 5 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSSSMVS*WTRPIW
Trigger: CCATATAGGCCGGGTCCACAAACTGACCATTGACGA...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTGGCACAAAGTCAATCTaGACCTCCATGAAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVGTKSI*TSMKWS
Trigger: GCTCCACTTCATGGAGGTCAAGATTGACTTTGTGCC...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCGGCACAAAGTCAATCTaGACCTCCATGAAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFGTKSI*TSMKWS
Trigger: GCTCCACTTCATGGAGGTCAAGATTGACTTTGTGCC...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAAGGATCAGCGTTGCCTaGTCCTCCATGTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSRISVA*SSMFSM
Trigger: CATTGAGAACATGGAGGACAAGGCAACGCTGATCCT...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCAGGATCAGCGTTGCCTaGTCCTCCATGTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFRISVA*SSMFSM
Trigger: CATTGAGAACATGGAGGACAAGGCAACGCTGATCCT...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTTCTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCATTGAACCAGGAAATCTaGGGCTTAGGACTACCTCGG +
Preference number: 5 (lower is better)
Translates to: LLKPTHFMLPVLTLSLGSLNQEI*GLGLPR
Trigger: CCGAGGTAGTCCTAAGCCCAAGATTTCCTGGTTCAA...TGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCAGATCCAGGCCATTCTaGAACCAGGAAATCTTGGGC +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFRSRPF*NQEILG
Trigger: GCCCAAGATTTCCTGGTTCAAGAATGGCCTGGATCT...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCGACCTTGGCTTCTTGTaGAAGGCTGACACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSDLGFL*KADTGF
Trigger: GAAACCAGTGTCAGCCTTCAACAAGAAGCCAAGGTC...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTCTGACCCTTCAGGACTaGAGACACTTTCTTCCAACT +
Preference number: 5 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVLTLQD*RHFLPT
Trigger: AGTTGGAAGAAAGTGTCTCAAGTCCTGAAGGGTCAG...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTTCTTGAACCGGTATTaGAAGGTCTCCTCACGTGTC +
Preference number: 5 (lower is better)
Translates to: AHTLYAPSINIILRVSFFFLNRY*KVSSRV
Trigger: GACACGTGAGGAGACCTTCAAATACCGGTTCAAGAA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTTCTTGAACCGGTATTaGAAGGTCTCCTCACGTGTC +
Preference number: 5 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVFLNRY*KVSSRV
Trigger: GACACGTGAGGAGACCTTCAAATACCGGTTCAAGAA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTTCCGCCCATCTTTCTaGAACCGGTATTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVFRPSF*NRYLKV
Trigger: GACCTTCAAATACCGGTTCAAGAAAGATGGGCGGAA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCGACACCTTTATGCGGTaGTCAGGCACCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTDTFMR*SGTSSF
Trigger: GAAGGAACTGGTGCCTGACAACCGCATAAAGGTGTC...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTCTGCAGGATCAGCGTaGCCTTGTCCTCCATGTTCT +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTSAGSA*PCPPCS
Trigger: AGAACATGGAGGACAAGGCAACGCTGATCCTGCAGA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTATCCTGGGGAGGACTaGGCTTGTCCACAATCTGCA +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTYPGED*ACPQSA
Trigger: TGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGATA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCTCCAGGGCCTTGTATTaGGGTGGCTCATATGTGATG +
Preference number: 5 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSSRALY*GGSYVM
Trigger: CATCACATATGAGCCACCCAAATACAAGGCCCTGGA...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCAGATCCAGGCCATTCTaGAACCAGGAAATCTTGGGC +
Preference number: 5 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSRSRPF*NQEILG
Trigger: GCCCAAGATTTCCTGGTTCAAGAATGGCCTGGATCT...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAGCTGACCTTGGCTTCTaGTTGAAGGCTGACACTGGT +
Preference number: 5 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEADLGF*LKADTG
Trigger: ACCAGTGTCAGCCTTCAACAAGAAGCCAAGGTCAGC...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCTGTCAAATTTGTCCTaGGTAGACACCTCACAGCGG +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTLSNLS*VDTSQR
Trigger: CCGCTGTGAGGTGTCTACCAAGGACAAATTTGACAG...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTCCAGGGTTGCTTCATaGATGATCAAGTGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSRVAS*MIKWCF
Trigger: GAAACACCACTTGATCATCAATGAAGCAACCCTGGA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCTCCAACTTCTTCTCTaGCACAATGAGCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTLQLLL*HNELSQ
Trigger: CTGGCTGAGCTCATTGTGCAAGAGAAGAAGTTGGAG...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACACTCCAGAGCCACATaGAAACCCCAAGTCTCAACG +
Preference number: 5 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEHSRAT*KPQVST
Trigger: CGTTGAGACTTGGGGTTTCAATGTGGCTCTGGAGTG...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTCCAGGGCCTTGTATTaGGGTGGCTCATATGTGATG +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTSRALY*GGSYVM
Trigger: CATCACATATGAGCCACCCAAATACAAGGCCCTGGA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAGTCAATACTCCCTGCTaGCAGAACATGCGGAAGCGA +
Preference number: 5 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEVNTPC*QNMRKR
Trigger: TCGCTTCCGCATGTTCTGCAAGCAGGGAGTATTGAC...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCTCATGGACAGTGAGGTaGAAGTTACAGCTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: AHTLYAPSINIILRVSFFSWTVR*KLQLSN
Trigger: ATTTGACAGCTGTAACTTCAACCTCACTGTCCATGA...GAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp GAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTCATGGACAGTGAGGTaGAAGTTACAGCTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: EAHTLYAPSINIILRVSFSWTVR*KLQLSN
Trigger: ATTTGACAGCTGTAACTTCAACCTCACTGTCCATGA...GAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp CTGAAGCCCACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCATGGACAGTGAGGTaGAAGTTACAGCTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: LKPTHFMLPVLTLSLGSVSWTVR*KLQLSN
Trigger: ATTTGACAGCTGTAACTTCAACCTCACTGTCCATGA...AACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGTGGGCTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp TTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCCAGCTCCAGGGTTGCTTCATaGATGATCAAGTGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: FMLPVLTLSLGSVSSEPSSRVAS*MIKWCF
Trigger: GAAACACCACTTGATCATCAATGAAGCAACCCTGGA...GCTGGGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAAGGATCAGCGTTGCCTaGTCCTCCATGTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: THFMLPVLTLSLGSVSSERISVA*SSMFSM
Trigger: CATTGAGAACATGGAGGACAAGGCAACGCTGATCCT...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAAGAGAAGTCCAGGGCCTaGTATTTGGGTGGCTCATAT +
Preference number: 5 (lower is better)
Translates to: THFMLPVLTLSLGSVSSEEKSRA*YLGGSY
Trigger: ATATGAGCCACCCAAATACAAGGCCCTGGACTTCTC...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAATTGAACCAGGAAATCTaGGGCTTAGGACTACCTCGG +
Preference number: 5 (lower is better)
Translates to: THFMLPVLTLSLGSVSSELNQEI*GLGLPR
Trigger: CCGAGGTAGTCCTAAGCCCAAGATTTCCTGGTTCAA...TTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS-3UTR CAA 90 bp ACACTTTATGCTCCCAGTATTAACATTATCCTTAGGGTCAGTTTCTTCAGAACCTCCAGGGTTGCTTCATaGATGATCAAGTGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: TLYAPSINIILRVSFFRTSRVAS*MIKWCF
Trigger: GAAACACCACTTGATCATCAATGAAGCAACCCTGGA...GGTTCTGAAGAAACTGACCCTAAGGATAATGTTAATACTGGGAGCATAAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp GTCGCTGCCATCCCGCTGCCACCGCACCTTCACGCCTaGCCGCTCCGTCTCAGCCTCGAACACGGCAGCACT +
Preference number: 6 (lower is better)
Translates to: VAAIPLPPHLHA*PLRLSLEHGST
Trigger: AGTGCTGCCGTGTTCGAGGCTGAGACGGAGCGGTCAGGCGTGAAGGTGCGGTGGCAGCGGGATGGCAGCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS TCA 72 bp AGGCGGTTTCAGGAGGCTGGCCCCAGCCACTCGGGCTaGGAAGACAATGCTGCCGCCCACGGTCACCTCACC +
Preference number: 6 (lower is better)
Translates to: RRFQEAGPSHSG*EDNAAAHGHLT
Trigger: GGTGAGGTGACCGTGGGCGGCAGCATTGTCTTCTCAGCCCGAGTGGCTGGGGCCAGCCTCCTGAAACCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp CCCCACCACACACTGGTAGGCTGCGTCGTCAGCCAGTaGGCACTGGCTGATGGTCAGGGTGCGCTTGGCACC +
Preference number: 6 (lower is better)
Translates to: PHHTLVGCVVSQ*ALADGQGALGT
Trigger: GGTGCCAAGCGCACCCTGACCATCAGCCAGTGCTCACTGGCTGACGACGCAGCCTACCAGTGTGTGGTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp GGTAGGTGCCCGAGTGGGTGCGGCGGGCAGCTCGGATaGACAAGATCGTGTCTGTGGGGCTGTTCCGGATGC +
Preference number: 6 (lower is better)
Translates to: GRCPSGCGGQLG*TRSCLWGCSGC
Trigger: GCATCCGGAACAGCCCCACAGACACGATCTTGTTCATCCGAGCTGCCCGCCGCACCCACTCGGGCACCTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp CCGACCTGCTCCCGCCAGGCTCGTGCGTCGGAAAGCTaGTCTGAGGTCCAGGTCTCCAGAACCAATGGCCTC +
Preference number: 6 (lower is better)
Translates to: PTCSRQARASES*SEVQVSRTNGL
Trigger: GAGGCCATTGGTTCTGGAGACCTGGACCTCAGATCAGCTTTCCGACGCACGAGCCTGGCGGGAGCAGGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp ACTGGTAGGCTGCGTCGTCAGCCAGTGAGCACTGGCTaGTGGTCAGGGTGCGCTTGGCACCGACGGACTCGA +
Preference number: 6 (lower is better)
Translates to: TGRLRRQPVSTG*WSGCAWHRRTR
Trigger: TCGAGTCCGTCGGTGCCAAGCGCACCCTGACCATCAGCCAGTGCTCACTGGCTGACGACGCAGCCTACCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp CTGACCGCTCCGTCTCAGCCTCGAACACGGCAGCACTaGCAGCGGTCACCTCCGCTGACCTTGGCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: LTAPSQPRTRQH*QRSPPLTLASC
Trigger: ACAAGAAGCCAAGGTCAGCGGAGGTGACCGCTGGCAGTGCTGCCGTGTTCGAGGCTGAGACGGAGCGGTCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS GCA 72 bp TACTTGTCATTGGCGGTGATGTCGCTGCCATCCCGCTaGCACCGCACCTTCACGCCTGACCGCTCCGTCTCA +
Preference number: 6 (lower is better)
Translates to: YLSLAVMSLPSR*HRTFTPDRSVS
Trigger: TGAGACGGAGCGGTCAGGCGTGAAGGTGCGGTGGCAGCGGGATGGCAGCGACATCACCGCCAATGACAAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS GCA 72 bp CACAGGCTCCTTGGTGACGATAGGGCCTCCAGGACCTaGCACATTGTGTGCCCGTACTCGGAACAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: HRLLGDDRASRT*HIVCPYSEQQP
Trigger: CGGCTGCTGTTCCGAGTACGGGCACACAATGTGGCAGGTCCTGGAGGCCCTATCGTCACCAAGGAGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp CTGAGGAACTCGCACCTCCAGGCGGCACTCACACTGTaGCTCGCCCTGCAAGTTGGTGGCCCTGCAGACATA +
Preference number: 6 (lower is better)
Translates to: LRNSHLQAALTL*LALQVGGPADI
Trigger: TATGTCTGCAGGGCCACCAACTTGCAGGGCGAGGCACAGTGTGAGTGCCGCCTGGAGGTGCGAGTTCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp TGTGTGCCCGTACTCGGAACAGCAGCCGTGCCCCAGTaGGTAGGTCCTTCACCAGCATCGATGTGCGCTCTG +
Preference number: 6 (lower is better)
Translates to: CVPVLGTAAVPQ*VGPSPASMCAL
Trigger: CAGAGCGCACATCGATGCTGGTGAAGGACCTACCCACTGGGGCACGGCTGCTGTTCCGAGTACGGGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp TTAGGGGCCGCAGGAGCATCTGGGACATCGATGACCTaGACTGTGAGGTTGACCTGGTCCTCGCCCACGGGG +
Preference number: 6 (lower is better)
Translates to: LGAAGASGTSMT*TVRLTWSSPTG
Trigger: CCCCGTGGGCGAGGACCAGGTCAACCTCACAGTCAAGGTCATCGATGTCCCAGATGCTCCTGCGGCCCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp CGCACTGTCAGTGTGTGTCGCTTGCCCTCTGCTGCCAAACCATACTaGTCATTGGCGGTGATGTCGCTGCCATCCCGCTGCCACCGCACC +
Preference number: 6 (lower is better)
Translates to: RTVSVCRLPSAAKPY*SLAVMSLPSRCHRT
Trigger: GGTGCGGTGGCAGCGGGATGGCAGCGACATCACCGCCAATGACAAGTATGGTTTGGCAGCAGAGGGCAAGCGACACACACTGACAGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CAA 90 bp GCTGCGTCGTCAGCCAGTGAGCACTGGCTGATGGTCAGGGTGCGCTaGGCACCGACGGACTCGAAGATGTACTTGCTGCCACTCATCTGG +
Preference number: 6 (lower is better)
Translates to: AASSASEHWLMVRVR*APTDSKMYLLPLIW
Trigger: CCAGATGAGTGGCAGCAAGTACATCTTCGAGTCCGTCGGTGCCAAGCGCACCCTGACCATCAGCCAGTGCTCACTGGCTGACGACGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp CGTAGACTCGCATCTCATAGGCTACACCCTCGATCATaGGCCTCGCCTCGTGGCTCAGCTCCCGCAGCAGAT +
Preference number: 6 (lower is better)
Translates to: RRLASHRLHPRS*ASPRGSAPAAD
Trigger: ATCTGCTGCGGGAGCTGAGCCACGAGGCGAGGCGCATGATCGAGGGTGTAGCCTATGAGATGCGAGTCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp TTCTCTGCCCCTTCGACTGTAAAGACGCTGCGGTCTTaGGTGGTCTCCACCCGGACCCGGCCCTCAGTCTCA +
Preference number: 6 (lower is better)
Translates to: FSAPSTVKTLRS*VVSTRTRPSVS
Trigger: TGAGACTGAGGGCCGGGTCCGGGTGGAGACCACCAAAGACCGCAGCGTCTTTACAGTCGAAGGGGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp GTCAGTGTGTGTCGCTTGCCCTCTGCTGCCAAACCATACTTGTCATaGGCGGTGATGTCGCTGCCATCCCGCTGCCACCGCACCTTCACG +
Preference number: 6 (lower is better)
Translates to: VSVCRLPSAAKPYLS*AVMSLPSRCHRTFT
Trigger: CGTGAAGGTGCGGTGGCAGCGGGATGGCAGCGACATCACCGCCAATGACAAGTATGGTTTGGCAGCAGAGGGCAAGCGACACACACTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CAA 90 bp TGGAGCCGTGGTCGTTGCAGTATCTCCTGCACTGTCACAGGCTCCTaGGTGACGATAGGGCCTCCAGGACCTGCCACATTGTGTGCCCGT +
Preference number: 6 (lower is better)
Translates to: WSRGRCSISCTVTGS*VTIGPPGPATLCAR
Trigger: ACGGGCACACAATGTGGCAGGTCCTGGAGGCCCTATCGTCACCAAGGAGCCTGTGACAGTGCAGGAGATACTGCAACGACCACGGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp TGCCAGCGGTCACCTCCGCTGACCTTGGCTTCTTGTTaGAGGCTGACACTGGTTTCTTCCCTGGCTCCGGCA +
Preference number: 6 (lower is better)
Translates to: CQRSPPLTLASC*RLTLVSSLAPA
Trigger: TGCCGGAGCCAGGGAAGAAACCAGTGTCAGCCTTCAACAAGAAGCCAAGGTCAGCGGAGGTGACCGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS TCA 72 bp TGTGACTCCGTGCTGGAAGGCGATGCGCTCATATTCTaGCGGCGGTGCCTGTCTCAGGATCTCCCACACGTC +
Preference number: 6 (lower is better)
Translates to: CDSVLEGDALIF*RRCLSQDLPHV
Trigger: GACGTGTGGGAGATCCTGAGACAGGCACCGCCGTCAGAATATGAGCGCATCGCCTTCCAGCACGGAGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp CAGGGCTCGCATCCCGCACTGTCAGTGTGTGTCGCTTaGCCTCTGCTGCCAAACCATACTTGTCATTGGCGG +
Preference number: 6 (lower is better)
Translates to: QGSHPALSVCVA*PLLPNHTCHWR
Trigger: CCGCCAATGACAAGTATGGTTTGGCAGCAGAGGGCAAGCGACACACACTGACAGTGCGGGATGCGAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CCA 72 bp CTCAGTGGCTGGAGCAGGGACTTCTTTGGGGGCTCCTaGAGCAACTTCAGATTCTGCCTTCTCTGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: LSGWSRDFFGGS*SNFRFCLLWRG
Trigger: GCCCCTCCAGAGAAGGCAGAATCTGAAGTTGCTCCAGGAGCCCCCAAAGAAGTCCCTGCTCCAGCCACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CCA 72 bp AGGTTCACAGGCTCCCCAACTTTCTTCTGGATGGTCTaGCGCAGGTGTCTGGGCAGTTGGAGCCGTGGTCGT +
Preference number: 6 (lower is better)
Translates to: RFTGSPTFFWMV*RRCLGSWSRGR
Trigger: ACGACCACGGCTCCAACTGCCCAGACACCTGCGCCAGACCATCCAGAAGAAAGTTGGGGAGCCTGTGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp GGGATGAGGAGGTTCACAGGCTCCCCAACTTTCTTCTaGATGGTCTGGCGCAGGTGTCTGGGCAGTTGGAGC +
Preference number: 6 (lower is better)
Translates to: GMRRFTGSPTFF*MVWRRCLGSWS
Trigger: GCTCCAACTGCCCAGACACCTGCGCCAGACCATCCAGAAGAAAGTTGGGGAGCCTGTGAACCTCCTCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp TCAGCCAGTGAGCACTGGCTGATGGTCAGGGTGCGCTaGGCACCGACGGACTCGAAGATGTACTTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: SASEHWLMVRVR*APTDSKMYLLP
Trigger: TGGCAGCAAGTACATCTTCGAGTCCGTCGGTGCCAAGCGCACCCTGACCATCAGCCAGTGCTCACTGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp AACACGGCAGCACTGCCAGCGGTCACCTCCGCTGACCTTGGCTTCTaGTTGAAGGCTGACACTGGTTTCTTCCCTGGCTCCGGCATCTTG +
Preference number: 6 (lower is better)
Translates to: NTAALPAVTSADLGF*LKADTGFFPGSGIL
Trigger: CAAGATGCCGGAGCCAGGGAAGAAACCAGTGTCAGCCTTCAACAAGAAGCCAAGGTCAGCGGAGGTGACCGCTGGCAGTGCTGCCGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CAA 90 bp CCCTGGTCATCAGGGCTCGCATCCCGCACTGTCAGTGTGTGTCGCTaGCCCTCTGCTGCCAAACCATACTTGTCATTGGCGGTGATGTCG +
Preference number: 6 (lower is better)
Translates to: PWSSGLASRTVSVCR*PSAAKPYLSLAVMS
Trigger: CGACATCACCGCCAATGACAAGTATGGTTTGGCAGCAGAGGGCAAGCGACACACACTGACAGTGCGGGATGCGAGCCCTGATGACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CAA 90 bp TCATCTTCCTTCTCTGCCCCTTCGACTGTAAAGACGCTGCGGTCTTaGGTGGTCTCCACCCGGACCCGGCCCTCAGTCTCACACAACAGC +
Preference number: 6 (lower is better)
Translates to: SSSFSAPSTVKTLRS*VVSTRTRPSVSHNS
Trigger: GCTGTTGTGTGAGACTGAGGGCCGGGTCCGGGTGGAGACCACCAAAGACCGCAGCGTCTTTACAGTCGAAGGGGCAGAGAAGGAAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp CCTCATCAGCACCAGCATCTTCTGGGGCATCAGGGTGTGGCCCAGTaGAGGCCTTCTTCCCCTGTGTTACAGTCTTCTGCCAGACCACAG +
Preference number: 6 (lower is better)
Translates to: PHQHQHLLGHQGVAQ*RPSSPVLQSSARPQ
Trigger: CTGTGGTCTGGCAGAAGACTGTAACACAGGGGAAGAAGGCCTCAACTGGGCCACACCCTGATGCCCCAGAAGATGCTGGTGCTGATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp GACAATGCTGCCGCCCACGGTCACCTCACCATCCTGTaGTCGCATCAGAAAGAGGCCAATAGGGTCATCAGG +
Preference number: 6 (lower is better)
Translates to: DNAAAHGHLTIL*SHQKEANRVIR
Trigger: CCTGATGACCCTATTGGCCTCTTTCTGATGCGACCACAGGATGGTGAGGTGACCGTGGGCGGCAGCATTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CCA 72 bp GAGACAGTGGTGTCTGACACATCCTCCACAGCCAAGTaGGTTGGTTCGCCAGGGGGCCCAATAGGCATGAAG +
Preference number: 6 (lower is better)
Translates to: ETVVSDTSSTAK*VGSPGGPIGMK
Trigger: CTTCATGCCTATTGGGCCCCCTGGCGAACCAACCCACTTGGCTGTGGAGGATGTGTCAGACACCACTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp TCAGGGCTCGCATCCCGCACTGTCAGTGTGTGTCGCTaGCCCTCTGCTGCCAAACCATACTTGTCATTGGCG +
Preference number: 6 (lower is better)
Translates to: SGLASRTVSVCR*PSAAKPYLSLA
Trigger: CGCCAATGACAAGTATGGTTTGGCAGCAGAGGGCAAGCGACACACACTGACAGTGCGGGATGCGAGCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CAA 72 bp CACCAGCATCTTCTGGGGCATCAGGGTGTGGCCCAGTaGAGGCCTTCTTCCCCTGTGTTACAGTCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: HQHLLGHQGVAQ*RPSSPVLQSSA
Trigger: GGCAGAAGACTGTAACACAGGGGAAGAAGGCCTCAACTGGGCCACACCCTGATGCCCCAGAAGATGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp GGTCGTTGCAGTATCTCCTGCACTGTCACAGGCTCCTaGGTGACGATAGGGCCTCCAGGACCTGCCACATTG +
Preference number: 6 (lower is better)
Translates to: GRCSISCTVTGS*VTIGPPGPATL
Trigger: CAATGTGGCAGGTCCTGGAGGCCCTATCGTCACCAAGGAGCCTGTGACAGTGCAGGAGATACTGCAACGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp GGCTGGCTCTGTGACCTTGAGGTCAAACTTGACCTTTaGGGAGCCTGCAATGACCGCGTAGGAACCCTGGTC +
Preference number: 6 (lower is better)
Translates to: GWLCDLEVKLDL*GACNDRVGTLV
Trigger: GACCAGGGTTCCTACGCGGTCATTGCAGGCTCCTCAAAGGTCAAGTTTGACCTCAAGGTCACAGAGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS GCA 72 bp CGCATCCCGCACTGTCAGTGTGTGTCGCTTGCCCTCTaGTGCCAAACCATACTTGTCATTGGCGGTGATGTC +
Preference number: 6 (lower is better)
Translates to: RIPHCQCVSLAL*CQTILVIGGDV
Trigger: GACATCACCGCCAATGACAAGTATGGTTTGGCAGCAGAGGGCAAGCGACACACACTGACAGTGCGGGATGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS GCA 72 bp GACTTCTTTGGGGGCTCCTGGAGCAACTTCAGATTCTaGCTTCTCTGGAGGGGCTGGCTCTGTGACCTTGAG +
Preference number: 6 (lower is better)
Translates to: DFFGGSWSNFRF*LLWRGWLCDLE
Trigger: CTCAAGGTCACAGAGCCAGCCCCTCCAGAGAAGGCAGAATCTGAAGTTGCTCCAGGAGCCCCCAAAGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS GCA 72 bp GGGCAGGGTTTCCTGATCTCCAGGGTCAATACTCCCTaGTTGCAGAACATGCGGAAGCGAGCATCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: GQGFLISRVNTP*LQNMRKRASSP
Trigger: GGGAGAAGATGCTCGCTTCCGCATGTTCTGCAAGCAGGGAGTATTGACCCTGGAGATCAGGAAACCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp GGAGCATCTGGGACATCGATGACCTTGACTGTGAGGTaGACCTGGTCCTCGCCCACGGGGTTCTTTACTGTG +
Preference number: 6 (lower is better)
Translates to: GASGTSMTLTVR*TWSSPTGFFTV
Trigger: CACAGTAAAGAACCCCGTGGGCGAGGACCAGGTCAACCTCACAGTCAAGGTCATCGATGTCCCAGATGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp ATGGTCAGTTTGTGGACCCGGCCTATATGGGACACCTTTATGCGGTaGTCAGGCACCAGTTCCTTCCCATTCTTCAGCCACACGCCGCGT +
Preference number: 6 (lower is better)
Translates to: MVSLWTRPIWDTFMR*SGTSSFPFFSHTPR
Trigger: ACGCGGCGTGTGGCTGAAGAATGGGAAGGAACTGGTGCCTGACAACCGCATAAAGGTGTCCCATATAGGCCGGGTCCACAAACTGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp ACAGTGGGAGCAGGGTCTCCAGAAATAGGGACATCCAGGCGTAACTaGTTCCCAGCAACAACCACAATGGTGTCTGGTGTGCTGCCGGGA +
Preference number: 6 (lower is better)
Translates to: TVGAGSPEIGTSRRN*FPATTTMVSGVLPG
Trigger: TCCCGGCAGCACACCAGACACCATTGTGGTTGTTGCTGGGAACAAGTTACGCCTGGATGTCCCTATTTCTGGAGACCCTGCTCCCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp ATCCCGCACTGTCAGTGTGTGTCGCTTGCCCTCTGCTaGCAAACCATACTTGTCATTGGCGGTGATGTCGCT +
Preference number: 6 (lower is better)
Translates to: IPHCQCVSLALC*QTILVIGGDVA
Trigger: AGCGACATCACCGCCAATGACAAGTATGGTTTGGCAGCAGAGGGCAAGCGACACACACTGACAGTGCGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS GCA 72 bp CAGCCTGGTCCTTGGCTCCCACTGCCAGGTCCGCGATaGTTTGGTATACCTCCAACTTCTTCTCTTGCACAA +
Preference number: 6 (lower is better)
Translates to: QPGPWLPLPGPR*FGIPPTSSLAQ
Trigger: TTGTGCAAGAGAAGAAGTTGGAGGTATACCAAAGCATCGCGGACCTGGCAGTGGGAGCCAAGGACCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp ACCCTTCAGGACTTGAGACACTTTCTTCCAACTCAGTaGCTGGAGCAGGGACTTCTTTGGGGGCTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: TLQDLRHFLPTQ*LEQGLLWGLLE
Trigger: CTCCAGGAGCCCCCAAAGAAGTCCCTGCTCCAGCCACTGAGTTGGAAGAAAGTGTCTCAAGTCCTGAAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CCA 72 bp TCTGGGACATCGATGACCTTGACTGTGAGGTTGACCTaGTCCTCGCCCACGGGGTTCTTTACTGTGACTGTG +
Preference number: 6 (lower is better)
Translates to: SGTSMTLTVRLT*SSPTGFFTVTV
Trigger: CACAGTCACAGTAAAGAACCCCGTGGGCGAGGACCAGGTCAACCTCACAGTCAAGGTCATCGATGTCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp TCTCCCACACGTCTTCTTCAGCAGGTGCCTCCAGCTTaGAGTCCCTCCGGAAATCTCTCTTCTTCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: SPTRLLQQVPPA*SPSGNLSSSAG
Trigger: CCCTGCTGAAGAAGAGAGATTTCCGGAGGGACTCAAAGCTGGAGGCACCTGCTGAAGAAGACGTGTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111430.10
CDS CAA 72 bp GTCTCAACGATCCGGATATCCTGGGGAGGACTTGGCTaGTCCACAATCTGCAGGATCAGCGTTGCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: VSTIRISWGGLG*STICRISVALS
Trigger: GGACAAGGCAACGCTGATCCTGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGATATCCGGATCGTTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp CTTGAGACACTTTCTTCCAACTCAGTGGCTGGAGCAGGGACTTCTTaGGGGGCTCCTGGAGCAACTTCAGATTCTGCCTTCTCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: LETLSSNSVAGAGTS*GAPGATSDSAFSGG
Trigger: CCCTCCAGAGAAGGCAGAATCTGAAGTTGCTCCAGGAGCCCCCAAAGAAGTCCCTGCTCCAGCCACTGAGTTGGAAGAAAGTGTCTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CAA 90 bp AAACACAGCCTGGTCCTTGGCTCCCACTGCCAGGTCCGCGATGCTTaGGTATACCTCCAACTTCTTCTCTTGCACAATGAGCTCAGCCAG +
Preference number: 6 (lower is better)
Translates to: KHSLVLGSHCQVRDA*VYLQLLLLHNELSQ
Trigger: CTGGCTGAGCTCATTGTGCAAGAGAAGAAGTTGGAGGTATACCAAAGCATCGCGGACCTGGCAGTGGGAGCCAAGGACCAGGCTGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp AGCGGTAGCCCCCAGCAGAAGTGGTCTGAGCATCTGTaGTGTGCAACTCAAACAAGTAGACCTTGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SGSPQQKWSEHL*CATQTSRPCWL
Trigger: GAGCCAGCAAGGTCTACTTGTTTGAGTTGCACATCACAGATGCTCAGACCACTTCTGCTGGGGGCTACCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp CCTCACGTGTCAGCTCAACCCCATCCTTCAGCCATTTaGCTTGGGCCCCTTCTTCTGAGACCTCACACTCAA +
Preference number: 6 (lower is better)
Translates to: PHVSAQPHPSAI*LGPLLLRPHTQ
Trigger: TTGAGTGTGAGGTCTCAGAAGAAGGGGCCCAAGTCAAATGGCTGAAGGATGGGGTTGAGCTGACACGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp TCGCCTCGTGGCTCAGCTCCCGCAGCAGATCAAAGTTaGGCCTCATCCACCTGTAGCTCTTTTTCTTCTTGC +
Preference number: 6 (lower is better)
Translates to: SPRGSAPAADQS*ASSTCSSFSSC
Trigger: GCAAGAAGAAAAAGAGCTACAGGTGGATGAGGCTCAACTTTGATCTGCTGCGGGAGCTGAGCCACGAGGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp CATCATCTTGGGGTGGCTTCCACTCCAGAGCCACATTaGAACCCCAAGTCTCAACGATCCGGATATCCTGGG +
Preference number: 6 (lower is better)
Translates to: HHLGVASTPEPH*NPKSQRSGYPG
Trigger: CCCAGGATATCCGGATCGTTGAGACTTGGGGTTTCAATGTGGCTCTGGAGTGGAAGCCACCCCAAGATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp TGTTCCCAGCAACAACCACAATGGTGTCTGGTGTGCTaGCGGGACAATCCAAGTGGATCTTGGGAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: CSQQQPQWCLVC*RDNPSGSWEVP
Trigger: AGGAACCTCCCAAGATCCACTTGGATTGTCCCGGCAGCACACCAGACACCATTGTGGTTGTTGCTGGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp CCAGTTGAGGCCTTCTTCCCCTGTGTTACAGTCTTCTaGCAGACCACAGTGGGAGCAGGGTCTCCAGAAATA +
Preference number: 6 (lower is better)
Translates to: PVEAFFPCVTVF*QTTVGAGSPEI
Trigger: TATTTCTGGAGACCCTGCTCCCACTGTGGTCTGGCAGAAGACTGTAACACAGGGGAAGAAGGCCTCAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp ACCTCGGACAGCACAGCAGAGGATGGCATTATAGCCTaGAATGATGGAGCGATTTGCCAAGGGCTGGGTGAA +
Preference number: 6 (lower is better)
Translates to: TSDSTAEDGIIA*NDGAICQGLGE
Trigger: TTCACCCAGCCCTTGGCAAATCGCTCCATCATTGCAGGCTATAATGCCATCCTCTGCTGTGCTGTCCGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp TGGTCCTTGGCTCCCACTGCCAGGTCCGCGATGCTTTaGTATACCTCCAACTTCTTCTCTTGCACAATGAGC +
Preference number: 6 (lower is better)
Translates to: WSLAPTARSAML*YTSNFFSCTMS
Trigger: GCTCATTGTGCAAGAGAAGAAGTTGGAGGTATACCAAAGCATCGCGGACCTGGCAGTGGGAGCCAAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp ACAATGGTGTCTGGTGTGCTGCCGGGACAATCCAAGTaGATCTTGGGAGGTTCCTGCCTAGGCACAAAGTCA +
Preference number: 6 (lower is better)
Translates to: TMVSGVLPGQSK*ILGGSCLGTKS
Trigger: TGACTTTGTGCCTAGGCAGGAACCTCCCAAGATCCACTTGGATTGTCCCGGCAGCACACCAGACACCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp CATCCAGGCGTAACTTGTTCCCAGCAACAACCACAATaGTGTCTGGTGTGCTGCCGGGACAATCCAAGTGGA +
Preference number: 6 (lower is better)
Translates to: HPGVTCSQQQPQ*CLVCCRDNPSG
Trigger: TCCACTTGGATTGTCCCGGCAGCACACCAGACACCATTGTGGTTGTTGCTGGGAACAAGTTACGCCTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp CCAAGTCTCAACGATCCGGATATCCTGGGGAGGACTTaGCTTGTCCACAATCTGCAGGATCAGCGTTGCCTT +
Preference number: 6 (lower is better)
Translates to: PSLNDPDILGRT*LVHNLQDQRCL
Trigger: AAGGCAACGCTGATCCTGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGATATCCGGATCGTTGAGACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp CTTTCTTCCAACTCAGTGGCTGGAGCAGGGACTTCTTaGGGGGCTCCTGGAGCAACTTCAGATTCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: LSSNSVAGAGTS*GAPGATSDSAF
Trigger: GAAGGCAGAATCTGAAGTTGCTCCAGGAGCCCCCAAAGAAGTCCCTGCTCCAGCCACTGAGTTGGAAGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CAA 72 bp AGCCATCCTGGGTTACCGAGACTGACCCTTCAGGACTaGAGACACTTTCTTCCAACTCAGTGGCTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: SHPGLPRLTLQD*RHFLPTQWLEQ
Trigger: CTGCTCCAGCCACTGAGTTGGAAGAAAGTGTCTCAAGTCCTGAAGGGTCAGTCTCGGTAACCCAGGATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111430.10
ENSMUST00000169776.2
CDS CAA 72 bp TCCTCACGTGTCAGCTCAACCCCATCCTTCAGCCATTaGACTTGGGCCCCTTCTTCTGAGACCTCACACTCA +
Preference number: 6 (lower is better)
Translates to: SSRVSSTPSFSH*TWAPSSETSHS
Trigger: TGAGTGTGAGGTCTCAGAAGAAGGGGCCCAAGTCAAATGGCTGAAGGATGGGGTTGAGCTGACACGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp CCATCATCTTGGGGTGGCTTCCACTCCAGAGCCACATaGAAACCCCAAGTCTCAACGATCCGGATATCCTGG +
Preference number: 6 (lower is better)
Translates to: PSSWGGFHSRAT*KPQVSTIRISW
Trigger: CCAGGATATCCGGATCGTTGAGACTTGGGGTTTCAATGTGGCTCTGGAGTGGAAGCCACCCCAAGATGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp TGGGTGAAGCTTGGGGCCTCAGAGAAGTCCAGGGCCTaGTATTTGGGTGGCTCATATGTGATGCCTGGTCTT +
Preference number: 6 (lower is better)
Translates to: WVKLGASEKSRA*YLGGSYVMPGL
Trigger: AAGACCAGGCATCACATATGAGCCACCCAAATACAAGGCCCTGGACTTCTCTGAGGCCCCAAGCTTCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp CGGAAGCGAGCATCTTCTCCCAGATCCAGGCCATTCTaGAACCAGGAAATCTTGGGCTTAGGACTACCTCGG +
Preference number: 6 (lower is better)
Translates to: RKRASSPRSRPF*NQEILGLGLPR
Trigger: CCGAGGTAGTCCTAAGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGATCTGGGAGAAGATGCTCGCTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp CAGGGTTTCCTGATCTCCAGGGTCAATACTCCCTGCTaGCAGAACATGCGGAAGCGAGCATCTTCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: QGFLISRVNTPC*QNMRKRASSPR
Trigger: TCTGGGAGAAGATGCTCGCTTCCGCATGTTCTGCAAGCAGGGAGTATTGACCCTGGAGATCAGGAAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp TCTCCCACACGTCTTCTTCAGCAGGTGCCTCCAGCTTaGAGTCCCTCCGGAAACTGTCTCTCTTCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: SPTRLLQQVPPA*SPSGNCLSSSA
Trigger: TGCTGAAGAAGAGAGACAGTTTCCGGAGGGACTCAAAGCTGGAGGCACCTGCTGAAGAAGACGTGTGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169776.2
CDS CAA 90 bp TATCCTGGGGAGGACTTGGCTTGTCCACAATCTGCAGGATCAGCGTaGCCTTGTCCTCCATGTTCTCAATGCGAACTGTCACCTGGTAGG +
Preference number: 6 (lower is better)
Translates to: YPGEDLACPQSAGSA*PCPPCSQCELSPGR
Trigger: CCTACCAGGTGACAGTTCGCATTGAGAACATGGAGGACAAGGCAACGCTGATCCTGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp GGTGGCTCATATGTGATGCCTGGTCTTGGAATAAAGACTGGCTCCTaGGTGGCGGCAGCTTTGTCACTGGAACCCACCATGTTATGGCTG +
Preference number: 6 (lower is better)
Translates to: GGSYVMPGLGIKTGS*VAAALSLEPTMLWL
Trigger: CAGCCATAACATGGTGGGTTCCAGTGACAAAGCTGCCGCCACCAAGGAGCCAGTCTTTATTCCAAGACCAGGCATCACATATGAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp CAGAACATGCGGAAGCGAGCATCTTCTCCCAGATCCAGGCCATTCTaGAACCAGGAAATCTTGGGCTTAGGACTACCTCGGACAGCACAG +
Preference number: 6 (lower is better)
Translates to: QNMRKRASSPRSRPF*NQEILGLGLPRTAQ
Trigger: CTGTGCTGTCCGAGGTAGTCCTAAGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGATCTGGGAGAAGATGCTCGCTTCCGCATGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp CCCATTCTTCAGCCACACGCCGCGTACATTCTCATCTaGAACCTCACACTTAAACACAGCCTGGTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: PILQPHAAYILI*NLTLKHSLVLG
Trigger: GCCAAGGACCAGGCTGTGTTTAAGTGTGAGGTTTCAGATGAGAATGTACGCGGCGTGTGGCTGAAGAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp CTGCCGGGACAATCCAAGTGGATCTTGGGAGGTTCCTaGCTAGGCACAAAGTCAATCTTGACCTCCATGAAG +
Preference number: 6 (lower is better)
Translates to: LPGQSKWILGGS*LGTKSILTSMK
Trigger: CTTCATGGAGGTCAAGATTGACTTTGTGCCTAGGCAGGAACCTCCCAAGATCCACTTGGATTGTCCCGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp ACTTGTTCCCAGCAACAACCACAATGGTGTCTGGTGTaGTGCCGGGACAATCCAAGTGGATCTTGGGAGGTT +
Preference number: 6 (lower is better)
Translates to: TCSQQQPQWCLV*CRDNPSGSWEV
Trigger: AACCTCCCAAGATCCACTTGGATTGTCCCGGCAGCACACCAGACACCATTGTGGTTGTTGCTGGGAACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp TCATCTGAAACCTCACACTTAAACACAGCCTGGTCCTaGGCTCCCACTGCCAGGTCCGCGATGCTTTGGTAT +
Preference number: 6 (lower is better)
Translates to: SSETSHLNTAWS*APTARSAMLWY
Trigger: ATACCAAAGCATCGCGGACCTGGCAGTGGGAGCCAAGGACCAGGCTGTGTTTAAGTGTGAGGTTTCAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp GGCACAAAGTCAATCTTGACCTCCATGAAGTGGAGCTaGGCAGACAGGTTGCAGGCAAACCCTTCAGGGACA +
Preference number: 6 (lower is better)
Translates to: GTKSILTSMKWS*ADRLQANPSGT
Trigger: TGTCCCTGAAGGGTTTGCCTGCAACCTGTCTGCCAAGCTCCACTTCATGGAGGTCAAGATTGACTTTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp GCAGGGTCTCCAGAAATAGGGACATCCAGGCGTAACTaGTTCCCAGCAACAACCACAATGGTGTCTGGTGTG +
Preference number: 6 (lower is better)
Translates to: AGSPEIGTSRRN*FPATTTMVSGV
Trigger: CACACCAGACACCATTGTGGTTGTTGCTGGGAACAAGTTACGCCTGGATGTCCCTATTTCTGGAGACCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp CTTGGCTTGTCCACAATCTGCAGGATCAGCGTTGCCTaGTCCTCCATGTTCTCAATGCGAACTGTCACCTGG +
Preference number: 6 (lower is better)
Translates to: LGLSTICRISVA*SSMFSMRTVTW
Trigger: CCAGGTGACAGTTCGCATTGAGAACATGGAGGACAAGGCAACGCTGATCCTGCAGATTGTGGACAAGCCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp CTTGGAATAAAGACTGGCTCCTTGGTGGCGGCAGCTTaGTCACTGGAACCCACCATGTTATGGCTGAAGACC +
Preference number: 6 (lower is better)
Translates to: LGIKTGSLVAAA*SLEPTMLWLKT
Trigger: GGTCTTCAGCCATAACATGGTGGGTTCCAGTGACAAAGCTGCCGCCACCAAGGAGCCAGTCTTTATTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp TATGTGATGCCTGGTCTTGGAATAAAGACTGGCTCCTaGGTGGCGGCAGCTTTGTCACTGGAACCCACCATG +
Preference number: 6 (lower is better)
Translates to: YVMPGLGIKTGS*VAAALSLEPTM
Trigger: CATGGTGGGTTCCAGTGACAAAGCTGCCGCCACCAAGGAGCCAGTCTTTATTCCAAGACCAGGCATCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp CGTACATTCTCATCTGAAACCTCACACTTAAACACAGCCTGGTCCTaGGCTCCCACTGCCAGGTCCGCGATGCTTTGGTATACCTCCAAC +
Preference number: 6 (lower is better)
Translates to: RTFSSETSHLNTAWS*APTARSAMLWYTSN
Trigger: GTTGGAGGTATACCAAAGCATCGCGGACCTGGCAGTGGGAGCCAAGGACCAGGCTGTGTTTAAGTGTGAGGTTTCAGATGAGAATGTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp TGTGCGTACTGCATAGTGTCCTGCATCCTCCAGGGTTaGTTCATTGATGATCAAGTGGTGTTTCCGCCCATC +
Preference number: 6 (lower is better)
Translates to: CAYCIVSCILQG*FIDDQVVFPPI
Trigger: GATGGGCGGAAACACCACTTGATCATCAATGAAGCAACCCTGGAGGATGCAGGACACTATGCAGTACGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp TCCGCGATGCTTTGGTATACCTCCAACTTCTTCTCTTaGACAATGAGCTCAGCCAGTGACTGGCCTCCACTT +
Preference number: 6 (lower is better)
Translates to: SAMLWYTSNFFS*TMSSASDWPPL
Trigger: AAGTGGAGGCCAGTCACTGGCTGAGCTCATTGTGCAAGAGAAGAAGTTGGAGGTATACCAAAGCATCGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp TCAGTTTGTGGACCCGGCCTATATGGGACACCTTTATaGGGTTGTCAGGCACCAGTTCCTTCCCATTCTTCA +
Preference number: 6 (lower is better)
Translates to: SVCGPGLYGTPL*GCQAPVPSHSS
Trigger: TGAAGAATGGGAAGGAACTGGTGCCTGACAACCGCATAAAGGTGTCCCATATAGGCCGGGTCCACAAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp CCGACGGACTCGAAGATGTACTTGCTGCCACTCATCTaGATCTCCTGTCCATTCTTAAGCCACTTGACTTCG +
Preference number: 6 (lower is better)
Translates to: PTDSKMYLLPLI*ISCPFLSHLTS
Trigger: CGAAGTCAAGTGGCTTAAGAATGGACAGGAGATCCAGATGAGTGGCAGCAAGTACATCTTCGAGTCCGTCGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp ACATTGAAACCCCAAGTCTCAACGATCCGGATATCCTaGGGAGGACTTGGCTTGTCCACAATCTGCAGGATC +
Preference number: 6 (lower is better)
Translates to: TLKPQVSTIRIS*GGLGLSTICRI
Trigger: GATCCTGCAGATTGTGGACAAGCCAAGTCCTCCCCAGGATATCCGGATCGTTGAGACTTGGGGTTTCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp TGGGGCCTCAGAGAAGTCCAGGGCCTTGTATTTGGGTaGCTCATATGTGATGCCTGGTCTTGGAATAAAGAC +
Preference number: 6 (lower is better)
Translates to: WGLREVQGLVFG*LICDAWSWNKD
Trigger: GTCTTTATTCCAAGACCAGGCATCACATATGAGCCACCCAAATACAAGGCCCTGGACTTCTCTGAGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp AAGTGGTGTTTCCGCCCATCTTTCTTGAACCGGTATTaGAAGGTCTCCTCACGTGTCAGCTCAACCCCATCC +
Preference number: 6 (lower is better)
Translates to: KWCFRPSFLNRY*KVSSRVSSTPS
Trigger: GGATGGGGTTGAGCTGACACGTGAGGAGACCTTCAAATACCGGTTCAAGAAAGATGGGCGGAAACACCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp GAGGACTTGGCTTGTCCACAATCTGCAGGATCAGCGTaGCCTTGTCCTCCATGTTCTCAATGCGAACTGTCA +
Preference number: 6 (lower is better)
Translates to: EDLACPQSAGSA*PCPPCSQCELS
Trigger: TGACAGTTCGCATTGAGAACATGGAGGACAAGGCAACGCTGATCCTGCAGATTGTGGACAAGCCAAGTCCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 72 bp AAGCTTGGGGCCTCAGAGAAGTCCAGGGCCTTGTATTaGGGTGGCTCATATGTGATGCCTGGTCTTGGAATA +
Preference number: 6 (lower is better)
Translates to: KLGASEKSRALY*GGSYVMPGLGI
Trigger: TATTCCAAGACCAGGCATCACATATGAGCCACCCAAATACAAGGCCCTGGACTTCTCTGAGGCCCCAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp CTGAGGTCCAGGTCTCCAGAACCAATGGCCTCATGGACAGTGAGGTaGAAGTTACAGCTGTCAAATTTGTCCTTGGTAGACACCTCACAG +
Preference number: 6 (lower is better)
Translates to: LRSRSPEPMASWTVR*KLQLSNLSLVDTSQ
Trigger: CTGTGAGGTGTCTACCAAGGACAAATTTGACAGCTGTAACTTCAACCTCACTGTCCATGAGGCCATTGGTTCTGGAGACCTGGACCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp TGCTTTGGTATACCTCCAACTTCTTCTCTTGCACAATaGGCTCAGCCAGTGACTGGCCTCCACTTGTGCGTA +
Preference number: 6 (lower is better)
Translates to: CFGIPPTSSLAQ*AQPVTGLHLCV
Trigger: TACGCACAAGTGGAGGCCAGTCACTGGCTGAGCTCATTGTGCAAGAGAAGAAGTTGGAGGTATACCAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp CCACACAGTGAGTGCGTCGGTAGTGTTCCAAAACCGTaGACCACTCCATGGTCTTCTTGTCAGCTTTCTGTA +
Preference number: 6 (lower is better)
Translates to: PHSECVGSVPKP*TTPWSSCQLSV
Trigger: TACAGAAAGCTGACAAGAAGACCATGGAGTGGTTCACGGTTTTGGAACACTACCGACGCACTCACTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS TCA 72 bp GACCCGGAAGTAGTAGCCATTGCCAATGATAAGCTCTaGTACCACACAGTGAGTGCGTCGGTAGTGTTCCAA +
Preference number: 6 (lower is better)
Translates to: DPEVVAIANDKL*YHTVSASVVFQ
Trigger: TTGGAACACTACCGACGCACTCACTGTGTGGTATCAGAGCTTATCATTGGCAATGGCTACTACTTCCGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS GCA 72 bp TACTGTGACTGTGTAGACACCTTCATCTTCCTTCTCTaGCCCTTCGACTGTAAAGACGCTGCGGTCTTTGGT +
Preference number: 6 (lower is better)
Translates to: YCDCVDTFIFLL*PFDCKDAAVFG
Trigger: ACCAAAGACCGCAGCGTCTTTACAGTCGAAGGGGCAGAGAAGGAAGATGAAGGTGTCTACACAGTCACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp TTGATGATCAAGTGGTGTTTCCGCCCATCTTTCTTGAACCGGTATTaGAAGGTCTCCTCACGTGTCAGCTCAACCCCATCCTTCAGCCAT +
Preference number: 6 (lower is better)
Translates to: LMIKWCFRPSFLNRY*KVSSRVSSTPSFSH
Trigger: ATGGCTGAAGGATGGGGTTGAGCTGACACGTGAGGAGACCTTCAAATACCGGTTCAAGAAAGATGGGCGGAAACACCACTTGATCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CAA 90 bp AGGGTTGCTTCATTGATGATCAAGTGGTGTTTCCGCCCATCTTTCTaGAACCGGTATTTGAAGGTCTCCTCACGTGTCAGCTCAACCCCA +
Preference number: 6 (lower is better)
Translates to: RVASLMIKWCFRPSF*NRYLKVSSRVSSTP
Trigger: TGGGGTTGAGCTGACACGTGAGGAGACCTTCAAATACCGGTTCAAGAAAGATGGGCGGAAACACCACTTGATCATCAATGAAGCAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp GATCTGAGGTCCAGGTCTCCAGAACCAATGGCCTCATaGACAGTGAGGTTGAAGTTACAGCTGTCAAATTTG +
Preference number: 6 (lower is better)
Translates to: DLRSRSPEPMAS*TVRLKLQLSNL
Trigger: CAAATTTGACAGCTGTAACTTCAACCTCACTGTCCATGAGGCCATTGGTTCTGGAGACCTGGACCTCAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2
CDS CCA 72 bp CCTGCATCCTCCAGGGTTGCTTCATTGATGATCAAGTaGTGTTTCCGCCCATCTTTCTTGAACCGGTATTTG +
Preference number: 6 (lower is better)
Translates to: PASSRVASLMIK*CFRPSFLNRYL
Trigger: CAAATACCGGTTCAAGAAAGATGGGCGGAAACACCACTTGATCATCAATGAAGCAACCCTGGAGGATGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111430.10
ENSMUST00000137942.8
ENSMUST00000169776.2