Pregenerated sensors for MYBL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025912Ensembl transcript IDs: ENSMUST00000088658.11, ENSMUST00000115468.9, ENSMUST00000188212.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAACGTGCCATCATTTGCTTATCTTTTCACACAGTGCAAGTGGTaGTCGCTCTTTCCATCTCTCATAGCAGCAAGCCGATTCTGCTAC | + |
|
Preference number: 1 (lower is better) Translates to: ENVPSFAYLFTQCKW*SLFPSLIAASRFCY Trigger: GTAGCAGAATCGGCTTGCTGCTATGAGAGATGGAAAGAGCGACCACCACTTGCACTGTGTGAAAAGATAAGCAAATGATGGCACGTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR CCA 90 bp | CTTGAGAACGTGCCATCATTTGCTTATCTTTTCACACAGTGCAAGTaGTGGTCGCTCTTTCCATCTCTCATAGCAGCAAGCCGATTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: LENVPSFAYLFTQCK*WSLFPSLIAASRFC Trigger: GCAGAATCGGCTTGCTGCTATGAGAGATGGAAAGAGCGACCACCACTTGCACTGTGTGAAAAGATAAGCAAATGATGGCACGTTCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR TCA 90 bp | ACAACAAAATGCAGTATTGGTATGTGTGAAGTCAGTTTCCATGCATaGATGGCTGCTACCTGTACGTCTGGCATCTTCAGAAAACTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: TTKCSIGMCEVSFHA*MAATCTSGIFRKLK Trigger: CTTCAGTTTTCTGAAGATGCCAGACGTACAGGTAGCAGCCATTCATGCATGGAAACTGACTTCACACATACCAATACTGCATTTTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR-3UTR TCA 90 bp | GTATGTGTGAAGTCAGTTTCCATGCATGAATGGCTGCTACCTGTACGTCTGGCATGTCAGTGTTTAGGTTaGCAGCACACCATTATACAT | + |
|
Preference number: 2 (lower is better) Translates to: VCVKSVSMHEWLLPVRLACQCLG*QHTIIH Trigger: ATGTATAATGGTGTGCTGTCAACCTAAACACTGACA...TGCCAGACGTACAGGTAGCAGCCATTCATGCATGGAAACTGACTTCACACATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR-3UTR GCA 90 bp | CTGAAAAATACCAAAATTAGTAGTGCAACTTCTAGCTTCCTTGAGACTCCTTCCTTCATAAAGCCTCTGTaGTTCCTAAATGTAGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: LKNTKISSATSSFLETPSFIKPL*FLNVDF Trigger: AAAGTCTACATTTAGGAAGCACAGAGGCTTTATGAA...GGAAGGAGTCTCAAGGAAGCTAGAAGTTGCACTACTAATTTTGGTATTTTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR CCA 72 bp | GTGCCATCATTTGCTTATCTTTTCACACAGTGCAAGTaGTGGTCGCTCTTTCCATCTCTCATAGCAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VPSFAYLFTQCK*WSLFPSLIAAS Trigger: GCTTGCTGCTATGAGAGATGGAAAGAGCGACCACCACTTGCACTGTGTGAAAAGATAAGCAAATGATGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR TCA 72 bp | TGCAGTATTGGTATGTGTGAAGTCAGTTTCCATGCATaGATGGCTGCTACCTGTACGTCTGGCATCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CSIGMCEVSFHA*MAATCTSGIFR Trigger: TCTGAAGATGCCAGACGTACAGGTAGCAGCCATTCATGCATGGAAACTGACTTCACACATACCAATACTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR GCA 72 bp | GAGAACGTGCCATCATTTGCTTATCTTTTCACACAGTaGAAGTGGTGGTCGCTCTTTCCATCTCTCATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ENVPSFAYLFTQ*KWWSLFPSLIA Trigger: TGCTATGAGAGATGGAAAGAGCGACCACCACTTGCACTGTGTGAAAAGATAAGCAAATGATGGCACGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR CCA 72 bp | GTATTGGTATGTGTGAAGTCAGTTTCCATGCATGAATaGCTGCTACCTGTACGTCTGGCATCTTCAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VLVCVKSVSMHE*LLPVRLASSEN Trigger: GTTTTCTGAAGATGCCAGACGTACAGGTAGCAGCCATTCATGCATGGAAACTGACTTCACACATACCAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR CCA 72 bp | GTTTTAGAATATGTAACGTGTCTGAGTTATATACTTTaGCCACTGGAGATTATTACATCCAATCAGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VLEYVTCLSYIL*PLEIITSNQLK Trigger: CTTCAGCTGATTGGATGTAATAATCTCCAGTGGCCAAAGTATATAACTCAGACACGTTACATATTCTAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR GCA 90 bp | CATAGCAGCAAGCCGATTCTGCTACTTTCTATAGCAGCATACTTCAGGAGTGGACATCGCCAAGCTCACTaGCTGCAGACTGACCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSKPILLLSIAAYFRSGHRQAH*LQTDPL Trigger: GAGTGGGTCAGTCTGCAGGCAGTGAGCTTGGCGATG...TCCACTCCTGAAGTATGCTGCTATAGAAAGTAGCAGAATCGGCTTGCTGCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR GCA 90 bp | ACTTTCTATAGCAGCATACTTCAGGAGTGGAGAGGGAGAGAGTGTGTCAATTATGCCAAGCTCACTGCCTaGAGACTGACCCACTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TFYSSILQEWRGRECVNYAKLTA*RLTHSN Trigger: ATTCGAGTGGGTCAGTCTGCAGGCAGTGAGCTTGGC...ATAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR GCA 90 bp | CATAGCAGCAAGCCGATTCTGCTACTTTCTATAGCAGCATACTTCAGGAGTGGATCCCAGGCGCTTGTGTaGTTCATATATGATCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSKPILLLSIAAYFRSGSQALV*FIYDPV Trigger: GACAGGATCATATATGAAGCACACAAGCGCCTGGGA...TCCACTCCTGAAGTATGCTGCTATAGAAAGTAGCAGAATCGGCTTGCTGCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR TCA 90 bp | CATAGCAGCAAGCCGATTCTGCTACTTTCTATAGCAGCATACTTCAGGAGTGGACCCACAAATTGGGGTTaGTGTAAAGGAAGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSKPILLLSIAAYFRSGPTNWG*CKGRVF Trigger: GAAAACCCTTCCTTTACATCAACCCCAATTTGTGGG...TCCACTCCTGAAGTATGCTGCTATAGAAAGTAGCAGAATCGGCTTGCTGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR GCA 90 bp | GTATGTGTGAAGTCAGTTTCCATGCATGAATGGCTGCTACCTGTACGTCTGGCATTCACAGATGCAGAGTaGTCCTGTTTGCAGCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VCVKSVSMHEWLLPVRLAFTDAE*SCLQLL Trigger: TAAAAGCTGCAAACAGGAGCACTCTGCATCTGTGAA...TGCCAGACGTACAGGTAGCAGCCATTCATGCATGGAAACTGACTTCACACATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CCA 90 bp | ACTTTCTATAGCAGCATACTTCAGGAGTGGAGAGGGAGAGAGTGTGTCAATTATAGGAGTAGGAGTTCTTaGTGTGGTGCCCAGTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFYSSILQEWRGRECVNYRSRSS*CGAQYR Trigger: TCTATACTGGGCACCACACCAAGAACTCCTACTCCT...ATAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR TCA 90 bp | ACTTTCTATAGCAGCATACTTCAGGAGTGGAGAGGGAGAGAGTGTGTCAATTATTTCTTTTCTTCTTTCTaGGGATGGTTGGAGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFYSSILQEWRGRECVNYFFSSF*GWLEEC Trigger: GCACTCCTCCAACCATCCTCAGAAAGAAGAAAAGAA...ATAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CCA 90 bp | CTTAGTAAATCAGCACACATGCAAAAGTACTTCATAAAGCCTCTGTGCTTCCTAGCTTCCAGGTTGAGGTaGAAGCCTCTTCCTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKSAHMQKYFIKPLCFLASRLR*KPLPSN Trigger: GTTAGAAGGAAGAGGCTTCCACCTCAACCTGGAAGC...TAGGAAGCACAGAGGCTTTATGAAGTACTTTTGCATGTGTGCTGATTTACTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR TCA 90 bp | CTGAAAAATACCAAAATTAGTAGTGCAACTTCTAGCTTCCTTGAGACTCCTTCCACTTCAGGGTTCAGGTaGTTGTGCCATCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKNTKISSATSSFLETPSTSGFR*LCHLSL Trigger: CAGAGAAAGATGGCACAATCACCTGAACCCTGAAGT...GGAAGGAGTCTCAAGGAAGCTAGAAGTTGCACTACTAATTTTGGTATTTTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR TCA 90 bp | TCTATAGCAGCATACTTCAGGAGTGGAGAGGGAGAGAGTGTGTCAATTATAAATACATACTATCATCCATaGGGAAACTACCAGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIAAYFRSGEGESVSIINTYYHP*GNYQTS Trigger: GCTGGTCTGGTAGTTTCCTCATGGATGATAGTATGT...ATTTATAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR TCA 90 bp | TCTATAGCAGCATACTTCAGGAGTGGAGAGGGAGAGAGTGTGTCAATTATAAATTCACTGGTGTGTGTTTaGGTGCTGCATTACCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SIAAYFRSGEGESVSIINSLVCV*VLHYQL Trigger: AAGTTGGTAATGCAGCACTCAAACACACACCAGTGA...ATTTATAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR TCA 90 bp | CATAGCAGCAAGCCGATTCTGCTACTTTCTATAGCAGCATACTTCAGGAGTGGATTCCCATTCACAATTTaGCTGAAGACTCTTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSSKPILLLSIAAYFRSGFPFTI*LKTLFQ Trigger: TTGGAAAAGAGTCTTCAGTCAAATTGTGAATGGGAA...TCCACTCCTGAAGTATGCTGCTATAGAAAGTAGCAGAATCGGCTTGCTGCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR GCA 90 bp | CTGAAAAATACCAAAATTAGTAGTGCAACTTCTAGCTTCCTTGAGACTCCTTCCGACCTTCTTCACAGATaGAGAGTGCTCCTGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKNTKISSATSSFLETPSDLLHR*RVLLFA Trigger: TGCAAACAGGAGCACTCTGCATCTGTGAAGAAGGTC...GGAAGGAGTCTCAAGGAAGCTAGAAGTTGCACTACTAATTTTGGTATTTTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CCA 90 bp | TCTATAGCAGCATACTTCAGGAGTGGAGAGGGAGAGAGTGTGTCAATTATAAATTTCTGGGTTTGCAAATaGTCCATAGTCGCACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIAAYFRSGEGESVSIINFWVCK*SIVAQG Trigger: ACCTTGTGCGACTATGGACCATTTGCAAACCCAGAA...ATTTATAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CCA 90 bp | AAAATACCAAAATTAGTAGTGCAACTTCTAGCTTCCTTGAGACTCCTTCCCACTCAGCTAGGAACTTTGTaGGTGAATTCTGCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KIPKLVVQLLASLRLLPTQLGTL*VNSAEQ Trigger: CTGCTCAGCAGAATTCACCCACAAAGTTCCTAGCTG...AGTGGGAAGGAGTCTCAAGGAAGCTAGAAGTTGCACTACTAATTTTGGTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CCA 90 bp | TCTATAGCAGCATACTTCAGGAGTGGAGAGGGAGAGAGTGTGTCAATTATAAATCTTTCTGAGGATGGTTaGAGGAGTGCTAAACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SIAAYFRSGEGESVSIINLSEDG*RSAKLD Trigger: GTCAAGTTTAGCACTCCTCCAACCATCCTCAGAAAG...ATTTATAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR CAA 72 bp | TTGAATCCATTAGTTAACTTGAGAACGTGCCATCATTaGCTTATCTTTTCACACAGTGCAAGTGGTGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LNPLVNLRTCHH*LIFSHSASGGR Trigger: GCGACCACCACTTGCACTGTGTGAAAAGATAAGCAAATGATGGCACGTTCTCAAGTTAACTAATGGATTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR TCA 90 bp | CTTAGTAAATCAGCACACATGCAAAAGTACTTCATAAAGCCTCTGTGCTTCCTATCTTCAGTTAGCAGTTaGGTCCCTGGTTCTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKSAHMQKYFIKPLCFLSSVSS*VPGSSL Trigger: CAAAGAAGAACCAGGGACTCAACTGCTAACTGAAGA...TAGGAAGCACAGAGGCTTTATGAAGTACTTTTGCATGTGTGCTGATTTACTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR TCA 90 bp | CTGTGCTTCCTAAATGTAGACTTTCAGAGGTCACACATACTTAACTTGTTTATAGGGGTTGCTTCCTTCTaGAGAGGAGTTGTAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCFLNVDFQRSHILNLFIGVASF*RGVVMR Trigger: TCTCATTACAACTCCTCTTCAGAAGGAAGCAACCCC...TATAAACAAGTTAAGTATGTGTGACCTCTGAAAGTCTACATTTAGGAAGCACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR TCA 90 bp | CTGTGCTTCCTAAATGTAGACTTTCAGAGGTCACACATACTTAACTTGTTTATAAGGCAAGGGATTTTCTaGCCTTCTTCACAGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCFLNVDFQRSHILNLFIRQGIF*PSSQMQ Trigger: CTGCATCTGTGAAGAAGGTCAGAAAATCCCTTGCCT...TATAAACAAGTTAAGTATGTGTGACCTCTGAAAGTCTACATTTAGGAAGCACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR GCA 90 bp | AAAATACCAAAATTAGTAGTGCAACTTCTAGCTTCCTTGAGACTCCTTCCCACTTGTGTGTTTGAGTGCTaGATTACCAACTTCGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KIPKLVVQLLASLRLLPTCVFEC*ITNFAK Trigger: CTTAGCGAAGTTGGTAATGCAGCACTCAAACACACA...AGTGGGAAGGAGTCTCAAGGAAGCTAGAAGTTGCACTACTAATTTTGGTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR GCA 90 bp | CTGAAAAATACCAAAATTAGTAGTGCAACTTCTAGCTTCCTTGAGACTCCTTCCCAGAGTGCTCCTGTTTaGAGCTTTTATAAGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKNTKISSATSSFLETPSQSAPV*SFYKQV Trigger: AACCTGCTTATAAAAGCTGCAAACAGGAGCACTCTG...GGAAGGAGTCTCAAGGAAGCTAGAAGTTGCACTACTAATTTTGGTATTTTTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CCA 90 bp | GTCAAAGTTATTGTTTACTATGTTAGCTGTAATGGCAAGAAACAACACTGGCTTCTGCGAATTCTGGGATaGTCTGTAGAGAAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKVIVYYVSCNGKKQHWLLRILG*SVEKTA Trigger: TGCTGTCTTCTCTACAGACCATCCCAGAATTCGCAG...AAGCCAGTGTTGTTTCTTGCCATTACAGCTAACATAGTAAACAATAACTTTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CCA 90 bp | GTTATTGTTTACTATGTTAGCTGTAATGGCAAGAAACAACACTGGCTTCTAGACAGACTGACGTTAAACTaGCATTCCATGGCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIVYYVSCNGKKQHWLLDRLTLN*HSMAPS Trigger: TGAAGGAGCCATGGAATGCCAGTTTAACGTCAGTCT...GTCTAGAAGCCAGTGTTGTTTCTTGCCATTACAGCTAACATAGTAAACAATAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTTCCTAAATGTAGACTTTCAGAGGTCACACATACTTAACTTGTTTATATTGATCTTTGGGGGTTaGTTCCTTCTGAAGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCFLNVDFQRSHILNLFILIFGG*FLLKRS Trigger: ACTCCTCTTCAGAAGGAAGCAACCCCCAAAGATCAA...TATAAACAAGTTAAGTATGTGTGACCTCTGAAAGTCTACATTTAGGAAGCACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR GCA 90 bp | GTTATTGTTTACTATGTTAGCTGTAATGGCAAGAAACAACACTGGCTTCTAGACTTCCTGAGCAGCAAGTaGATTCTTAAAAGGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIVYYVSCNGKKQHWLLDFLSSK*ILKRSR Trigger: CCTACTCCTTTTAAGAATGCACTTGCTGCTCAGGAA...GTCTAGAAGCCAGTGTTGTTTCTTGCCATTACAGCTAACATAGTAAACAATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CCA 90 bp | CTGAAAAATACCAAAATTAGTAGTGCAACTTCTAGCTTCCTTGAGACTCCTTCCAAAAAGGCAAGTGGCTaGGACACAATTTTAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKNTKISSATSSFLETPSKKASG*DTILRG Trigger: ACCTCTTAAAATTGTGTCCCAGCCACTTGCCTTTTT...GGAAGGAGTCTCAAGGAAGCTAGAAGTTGCACTACTAATTTTGGTATTTTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CCA 90 bp | TCTATAGCAGCATACTTCAGGAGTGGAGAGGGAGAGAGTGTGTCAATTATAAATTCAGTCATGATAAGTTaGTCTTCTGTCTTCCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SIAAYFRSGEGESVSIINSVMIS*SSVFPY Trigger: ATATGGGAAGACAGAAGACCAACTTATCATGACTGA...ATTTATAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR CAA 72 bp | AAGCTGTTTGGTTTGGTTTTGAGGCATAGTGGTGTTTaGGTCTTTGTAAGAATCTGCTTGGGAATAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLFGLVLRHSGV*VFVRICLGIVE Trigger: TTCAACTATTCCCAAGCAGATTCTTACAAAGACCAAAACACCACTATGCCTCAAAACCAAACCAAACAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTTCCTAAATGTAGACTTTCAGAGGTCACACATACTTAACTTGTTTATACATGTTCAACACAATTaGCATCAGGCGACACATACT | + |
|
Preference number: 4 (lower is better) Translates to: LCFLNVDFQRSHILNLFIHVQHN*HQATHT Trigger: AGTATGTGTCGCCTGATGGCAATTGTGTTGAACATG...TATAAACAAGTTAAGTATGTGTGACCTCTGAAAGTCTACATTTAGGAAGCACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR CAA 72 bp | CTAAATGTAGACTTTCAGAGGTCACACATACTTAACTaGTTTATAACAGACTACAGCCTTGAGACAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNVDFQRSHILN*FITDYSLETVA Trigger: TGCTACTGTCTCAAGGCTGTAGTCTGTTATAAACAAGTTAAGTATGTGTGACCTCTGAAAGTCTACATTTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR TCA 90 bp | GTCAAAGTTATTGTTTACTATGTTAGCTGTAATGGCAAGAAACAACACTGGCTTTGTGTGCTTCATATATaGTCCTGTCTTCTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKVIVYYVSCNGKKQHWLCVLHI*SCLLLL Trigger: CAGAAGAAGAAGACAGGATCATATATGAAGCACACA...AAGCCAGTGTTGTTTCTTGCCATTACAGCTAACATAGTAAACAATAACTTTGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CCA 90 bp | GTTATTGTTTACTATGTTAGCTGTAATGGCAAGAAACAACACTGGCTTCTAGACTTTCTTTTTGATCTTTaGGGGTTGCTTCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VIVYYVSCNGKKQHWLLDFLFDL*GLLPSE Trigger: TTCAGAAGGAAGCAACCCCCAAAGATCAAAAAGAAA...GTCTAGAAGCCAGTGTTGTTTCTTGCCATTACAGCTAACATAGTAAACAATAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR TCA 90 bp | CTGTGCTTCCTAAATGTAGACTTTCAGAGGTCACACATACTTAACTTGTTTATAAATTCAATAACCCTCTaGTCTTCTTCCTTAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCFLNVDFQRSHILNLFINSITL*SSSLVQ Trigger: TTGGACTAAGGAAGAAGATCAGAGGGTTATTGAATT...TATAAACAAGTTAAGTATGTGTGACCTCTGAAAGTCTACATTTAGGAAGCACAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| 3UTR CAA 72 bp | TGTTTTAGAATATGTAACGTGTCTGAGTTATATACTTaGGCCACTGGAGATTATTACATCCAATCAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFRICNVSELYT*ATGDYYIQSAE Trigger: TTCAGCTGATTGGATGTAATAATCTCCAGTGGCCAAAGTATATAACTCAGACACGTTACATATTCTAAAACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTTCCTAAATGTAGACTTTCAGAGGTCACACATACTTAACTTGTTTATATTTCAGGAGTCAAGTTaGACCTATTGTCATGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: LCFLNVDFQRSHILNLFIFQESS*TYCHVF Trigger: AAATACATGACAATAGGTGCAACTTGACTCCTGAAA...TATAAACAAGTTAAGTATGTGTGACCTCTGAAAGTCTACATTTAGGAAGCACAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTTCCTAAATGTAGACTTTCAGAGGTCACACATACTTAACTTGTTTATAACAAGGGTTAGGGTTTaGTCTCTTTTTATTAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCFLNVDFQRSHILNLFITRVRV*SLFIKC Trigger: ACACTTAATAAAAAGAGACCAAACCCTAACCCTTGT...TATAAACAAGTTAAGTATGTGTGACCTCTGAAAGTCTACATTTAGGAAGCACAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS TCA 90 bp | TTTCACTGGTGTGTGTTTGAGTGCTGCATTACCAACTTCGCTAAGTaGGCCATCGCCAAGCTCACTGCCTGCAGACTGACCCACTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FHWCVFECCITNFAK*AIAKLTACRLTHSN Trigger: ATTCGAGTGGGTCAGTCTGCAGGCAGTGAGCTTGGCGATGGCTCACTTAGCGAAGTTGGTAATGCAGCACTCAAACACACACCAGTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS-3UTR CAA 90 bp | CATAGCAGCAAGCCGATTCTGCTACTTTCTATAGCAGCATACTTCAGGAGTGGACGGTTTCCCAGGCGCTaGTGTGCTTCATATATGATC | + |
|
Preference number: 5 (lower is better) Translates to: HSSKPILLLSIAAYFRSGRFPRR*CASYMI Trigger: GATCATATATGAAGCACACAAGCGCCTGGGAAACCG...TCCACTCCTGAAGTATGCTGCTATAGAAAGTAGCAGAATCGGCTTGCTGCTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS CCA 90 bp | CAGGATCCGATTCAATTAGTTCCAGAGTTTCTGCGAATTCTGGGATaGTCTGTAGAGAAGACAGCACGGCATTTGCTTCTACAGCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QDPIQLVPEFLRILG*SVEKTARHLLLQLG Trigger: TCCTAGCTGTAGAAGCAAATGCCGTGCTGTCTTCTCTACAGACCATCCCAGAATTCGCAGAAACTCTGGAACTAATTGAATCGGATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS-3UTR CAA 90 bp | CATAGCAGCAAGCCGATTCTGCTACTTTCTATAGCAGCATACTTCAGGAGTGGAGGAGGAGTGCTAAACTaGACCACATTTGGGGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: HSSKPILLLSIAAYFRSGGGVLN*TTFGDV Trigger: AACATCCCCAAATGTGGTCAAGTTTAGCACTCCTCC...TCCACTCCTGAAGTATGCTGCTATAGAAAGTAGCAGAATCGGCTTGCTGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS CCA 90 bp | GTAGAGAAGACAGCACGGCATTTGCTTCTACAGCTAGGAACTTTGTaGGTGAATTCTGCTGAGCAGAAACAGTCTGATTTTCATCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: VEKTARHLLLQLGTL*VNSAEQKQSDFHPC Trigger: GCATGGATGAAAATCAGACTGTTTCTGCTCAGCAGAATTCACCCACAAAGTTCCTAGCTGTAGAAGCAAATGCCGTGCTGTCTTCTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS TCA 90 bp | CATTCACAATTTGACTGCATGTCTGAAATGTCTTCAGTTAGCAGTTaGGTCCCTGGTTCTTCTTTGTCCCAGCTCTCTAAGGCAAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HSQFDCMSEMSSVSS*VPGSSLSQLSKARD Trigger: ATCCCTTGCCTTAGAGAGCTGGGACAAAGAAGAACCAGGGACTCAACTGCTAACTGAAGACATTTCAGACATGCAGTCAAATTGTGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115468.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGTAAATCAGCACACATGCAAAAGTACTTCATAAAGCCTCTGTGCTTCCTAGTCCCTGGTTCTTCTTaGTCCCAGCTCTCTAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSKSAHMQKYFIKPLCFLVPGSS*SQLSKA Trigger: TGCCTTAGAGAGCTGGGACAAAGAAGAACCAGGGAC...TAGGAAGCACAGAGGCTTTATGAAGTACTTTTGCATGTGTGCTGATTTACTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS TCA 90 bp | AGAATATTTTCTGACTGCATGTCTGAAATGTCTTCAGTTAGCAGTTaGGTCCCTGGTTCTTCTTTGTCCCAGCTCTCTAAGGCAAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RIFSDCMSEMSSVSS*VPGSSLSQLSKARD Trigger: ATCCCTTGCCTTAGAGAGCTGGGACAAAGAAGAACCAGGGACTCAACTGCTAACTGAAGACATTTCAGACATGCAGTCAGAAAATATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | CTGAAAAATACCAAAATTAGTAGTGCAACTTCTAGCTTCCTTGAGACTCCTTCCAGAAAAGCTTCCAGGTaGAGGTGGAAGCCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LKNTKISSATSSFLETPSRKASR*RWKPLP Trigger: AGGAAGAGGCTTCCACCTCAACCTGGAAGCTTTTCT...GGAAGGAGTCTCAAGGAAGCTAGAAGTTGCACTACTAATTTTGGTATTTTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | ACTTTCTATAGCAGCATACTTCAGGAGTGGAGAGGGAGAGAGTGTGTCAATTATTTCACTGGTGTGTGTTaGAGTGCTGCATTACCAACT | + |
|
Preference number: 5 (lower is better) Translates to: TFYSSILQEWRGRECVNYFTGVC*SAALPT Trigger: AGTTGGTAATGCAGCACTCAAACACACACCAGTGAA...ATAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | TCTATAGCAGCATACTTCAGGAGTGGAGAGGGAGAGAGTGTGTCAATTATAAATTTTGATCTTTGGGGGTaGCTTCCTTCTGAAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SIAAYFRSGEGESVSIINFDLWG*LPSEEE Trigger: CTCCTCTTCAGAAGGAAGCAACCCCCAAAGATCAAA...ATTTATAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | GTATGTGTGAAGTCAGTTTCCATGCATGAATGGCTGCTACCTGTACGTCTGGCAAGACTCTTTTCCAATTaGACAGCTTTACAAGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VCVKSVSMHEWLLPVRLARLFSN*TALQGL Trigger: TAACCCTTGTAAAGCTGTCAAATTGGAAAAGAGTCT...TGCCAGACGTACAGGTAGCAGCCATTCATGCATGGAAACTGACTTCACACATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | CATAGCAGCAAGCCGATTCTGCTACTTTCTATAGCAGCATACTTCAGGAGTGGATTCAGTCATGATAAGTaGGTCTTCTGTCTTCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: HSSKPILLLSIAAYFRSGFSHDK*VFCLPI Trigger: TATGGGAAGACAGAAGACCAACTTATCATGACTGAA...TCCACTCCTGAAGTATGCTGCTATAGAAAGTAGCAGAATCGGCTTGCTGCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | CATAGCAGCAAGCCGATTCTGCTACTTTCTATAGCAGCATACTTCAGGAGTGGATTTTCAGGAGTCAAGTaGCACCTATTGTCATGTATT | + |
|
Preference number: 5 (lower is better) Translates to: HSSKPILLLSIAAYFRSGFSGVK*HLLSCI Trigger: AATACATGACAATAGGTGCAACTTGACTCCTGAAAA...TCCACTCCTGAAGTATGCTGCTATAGAAAGTAGCAGAATCGGCTTGCTGCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | CTGAAAAATACCAAAATTAGTAGTGCAACTTCTAGCTTCCTTGAGACTCCTTCCATCATGATCAGCATATaGAAGGTCATCATCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKNTKISSATSSFLETPSIMISI*KVIILV Trigger: GACGAGGATGATGACCTTCAATATGCTGATCATGAT...GGAAGGAGTCTCAAGGAAGCTAGAAGTTGCACTACTAATTTTGGTATTTTTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | TCTATAGCAGCATACTTCAGGAGTGGAGAGGGAGAGAGTGTGTCAATTATAAATACCAACTTCTTTAACTaGTCATCCTCATCTCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SIAAYFRSGEGESVSIINTNFFN*SSSSLV Trigger: GACAAGAGATGAGGATGACAAGTTAAAGAAGTTGGT...ATTTATAATTGACACACTCTCTCCCTCTCCACTCCTGAAGTATGCTGCTATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | GTTATTGTTTACTATGTTAGCTGTAATGGCAAGAAACAACACTGGCTTCTAGACAAACTGATTCTGGGTTaGCAAATGGTCCATAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: VIVYYVSCNGKKQHWLLDKLILG*QMVHSR Trigger: GCGACTATGGACCATTTGCAAACCCAGAATCAGTTT...GTCTAGAAGCCAGTGTTGTTTCTTGCCATTACAGCTAACATAGTAAACAATAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | CTGAAAAATACCAAAATTAGTAGTGCAACTTCTAGCTTCCTTGAGACTCCTTCCTTCATCAACAAAGGGTaGCTGAATAAAGGCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LKNTKISSATSSFLETPSFINKG*LNKGRC Trigger: ACATCTGCCTTTATTCAGCAACCCTTTGTTGATGAA...GGAAGGAGTCTCAAGGAAGCTAGAAGTTGCACTACTAATTTTGGTATTTTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | CTGTGCTTCCTAAATGTAGACTTTCAGAGGTCACACATACTTAACTTGTTTATAGTTTGTGTTGAAGTTTaGATGAAGACCGCTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LCFLNVDFQRSHILNLFIVCVEV*MKTALI Trigger: AATCAGAGCGGTCTTCATCAAAACTTCAACACAAAC...TATAAACAAGTTAAGTATGTGTGACCTCTGAAAGTCTACATTTAGGAAGCACAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS-3UTR CAA 90 bp | GTTATTGTTTACTATGTTAGCTGTAATGGCAAGAAACAACACTGGCTTCTAGACTTTCCCATTCACAATTaGACTGAAGACTCTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VIVYYVSCNGKKQHWLLDFPIHN*TEDSFP Trigger: TGGAAAAGAGTCTTCAGTCAAATTGTGAATGGGAAA...GTCTAGAAGCCAGTGTTGTTTCTTGCCATTACAGCTAACATAGTAAACAATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS TCA 72 bp | CTTCTTTGTCCCAGCTCTCTAAGGCAAGGGATTTTCTaGCCTTCTTCACAGATGCAGAGTGCTCCTGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLCPSSLRQGIF*PSSQMQSAPVC Trigger: GCAAACAGGAGCACTCTGCATCTGTGAAGAAGGTCAGAAAATCCCTTGCCTTAGAGAGCTGGGACAAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS CAA 90 bp | TTTCTGCGAATTCTGGGATGGTCTGTAGAGAAGACAGCACGGCATTaGCTTCTACAGCTAGGAACTTTGTGGGTGAATTCTGCTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLRILGWSVEKTARH*LLQLGTLWVNSAEQ Trigger: CTGCTCAGCAGAATTCACCCACAAAGTTCCTAGCTGTAGAAGCAAATGCCGTGCTGTCTTCTCTACAGACCATCCCAGAATTCGCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS TCA 72 bp | TCTGACTGCATGTCTGAAATGTCTTCAGTTAGCAGTTaGGTCCCTGGTTCTTCTTTGTCCCAGCTCTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SDCMSEMSSVSS*VPGSSLSQLSK Trigger: CTTAGAGAGCTGGGACAAAGAAGAACCAGGGACTCAACTGCTAACTGAAGACATTTCAGACATGCAGTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS CAA 72 bp | AAGACAGCACGGCATTTGCTTCTACAGCTAGGAACTTaGTGGGTGAATTCTGCTGAGCAGAAACAGTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: KTARHLLLQLGT*WVNSAEQKQSD Trigger: ATCAGACTGTTTCTGCTCAGCAGAATTCACCCACAAAGTTCCTAGCTGTAGAAGCAAATGCCGTGCTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS CAA 72 bp | ATTCTGGGATGGTCTGTAGAGAAGACAGCACGGCATTaGCTTCTACAGCTAGGAACTTTGTGGGTGAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: ILGWSVEKTARH*LLQLGTLWVNS Trigger: AGAATTCACCCACAAAGTTCCTAGCTGTAGAAGCAAATGCCGTGCTGTCTTCTCTACAGACCATCCCAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS CAA 90 bp | TCTGTAGAGAAGACAGCACGGCATTTGCTTCTACAGCTAGGAACTTaGTGGGTGAATTCTGCTGAGCAGAAACAGTCTGATTTTCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: SVEKTARHLLLQLGT*WVNSAEQKQSDFHP Trigger: TGGATGAAAATCAGACTGTTTCTGCTCAGCAGAATTCACCCACAAAGTTCCTAGCTGTAGAAGCAAATGCCGTGCTGTCTTCTCTACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS TCA 72 bp | TTTGACTGCATGTCTGAAATGTCTTCAGTTAGCAGTTaGGTCCCTGGTTCTTCTTTGTCCCAGCTCTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: FDCMSEMSSVSS*VPGSSLSQLSK Trigger: CTTAGAGAGCTGGGACAAAGAAGAACCAGGGACTCAACTGCTAACTGAAGACATTTCAGACATGCAGTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115468.9 |
||
| CDS CAA 72 bp | GAAGGAGAAAATGGTAGTGTTTTCACTGGTGTGTGTTaGAGTGCTGCATTACCAACTTCGCTAAGTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EGENGSVFTGVC*SAALPTSLSEP Trigger: TGGCTCACTTAGCGAAGTTGGTAATGCAGCACTCAAACACACACCAGTGAAAACACTACCATTTTCTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS CCA 72 bp | ATTCAATTAGTTCCAGAGTTTCTGCGAATTCTGGGATaGTCTGTAGAGAAGACAGCACGGCATTTGCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: IQLVPEFLRILG*SVEKTARHLLL Trigger: TAGAAGCAAATGCCGTGCTGTCTTCTCTACAGACCATCCCAGAATTCGCAGAAACTCTGGAACTAATTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS CAA 72 bp | TTTTTGTTGAGGTACTTCATAATCATGATCAGCATATaGAAGGTCATCATCCTCGTCCTCACTGCGCGACCT | + |
|
Preference number: 6 (lower is better) Translates to: FLLRYFIIMISI*KVIILVLTARP Trigger: AGGTCGCGCAGTGAGGACGAGGATGATGACCTTCAATATGCTGATCATGATTATGAAGTACCTCAACAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS CAA 72 bp | TTCTTCTTTCTGAGGATGGTTGGAGGAGTGCTAAACTaGACCACATTTGGGGATGTTAAAGGAATAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FFFLRMVGGVLN*TTFGDVKGIAS Trigger: TGAAGCTATTCCTTTAACATCCCCAAATGTGGTCAAGTTTAGCACTCCTCCAACCATCCTCAGAAAGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS TCA 72 bp | GTTTGCAAATGGTCCATAGTCGCACAAGGTTTGTGTTaGAGTTTTGATGAAGACCGCTCTGATTTTATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VCKWSIVAQGLC*SFDEDRSDFIP Trigger: TGGAATAAAATCAGAGCGGTCTTCATCAAAACTTCAACACAAACCTTGTGCGACTATGGACCATTTGCAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 ENSMUST00000188212.2 |
||
| CDS CAA 90 bp | TGTGTAAGTACTCAGATATCTTCTCGCTTGTTCAGTCATGATAAGTaGGTCTTCTGTCTTCCCATATACCACTGTTTCCCATTCACAATT | + |
|
Preference number: 6 (lower is better) Translates to: CVSTQISSRLFSHDK*VFCLPIYHCFPFTI Trigger: AATTGTGAATGGGAAACAGTGGTATATGGGAAGACAGAAGACCAACTTATCATGACTGAACAAGCGAGAAGATATCTGAGTACTTACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088658.11 ENSMUST00000115468.9 |
||
| CDS TCA 72 bp | TTCCCATATACCACTGTTTCCCATTCACAATTTGACTaGAGACTCTTTTCCAATTTGACAGCTTTACAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: FPYTTVSHSQFD*RLFSNLTALQG Trigger: CCCTTGTAAAGCTGTCAAATTGGAAAAGAGTCTTCAGTCAAATTGTGAATGGGAAACAGTGGTATATGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088658.11 |
||
| CDS CAA 72 bp | TTTTTGTTGAGGTACTTCATAATCATGATCAGCATATaGAAGGTCATCATCCTCGTCCTCACTGGCAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: FLLRYFIIMISI*KVIILVLTGKK Trigger: TTTCTTGCCAGTGAGGACGAGGATGATGACCTTCAATATGCTGATCATGATTATGAAGTACCTCAACAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188212.2 |
||