RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYBBP1A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040463

Ensembl transcript IDs: ENSMUST00000045633.6

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp ACAACCTGGGGAAGGGAAGGGCACACGGGCCCTAACCCTGGAAGGTaGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTA +
Preference number: 2 (lower is better)
Translates to: TTWGREGHTGPNPGR*SQRLASYSIMDCLL
Trigger: TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGGGTTAGGGCCCGTGTGCCCTTCCCTTCCCCAGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAAGGCATGCCTGGGCCTaGTGGCGGGGCCGAGATGGG +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLRHAWA*WRGRDG
Trigger: CCCATCTCGGCCCCGCCATCAGGCCCAGGCATGCCT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGATGGCGGGGCCGAGATaGGCCAGCCACATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGMAGPR*ASHMLS
Trigger: GCTCAGCATGTGGCTGGCCCATCTCGGCCCCGCCAT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGCGAATCTGCTCTCCTTaGGCGCCAGGCGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGRICSP*APGGAG
Trigger: ACCTGCTCCGCCTGGCGCTCAAGGAGAGCAGATTCG...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGGGCCAGCCACATGCTaGGCCAGGACGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLGPATC*ARTGSR
Trigger: CCTGCTTCCCGTCCTGGCTCAGCATGTGGCTGGCCC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGAAGAACTCGCGGCTGTaGTCCAGCAGGCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGKNSRL*SSRLWR
Trigger: CCGCCACAGCCTGCTGGAGCACAGCCGCGAGTTCTT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGCTCTCCACCTGGGCATaGAGAGCCTCTGCACACGGC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGLSTWA*RASAHG
Trigger: GCCGTGTGCAGAGGCTCTGCATGCCCAGGTGGAGAG...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGCTGCAACTGCTCCTCTaGCAGAAGCGGCAGAGACGC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGLQLLL*QKRQRR
Trigger: GCGTCTCTGCCGCTTCTGTCAGAGGAGCAGTTGCAG...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGAGCAGCCTGGTCCTCTaGGTCCTCTGTGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGSSLVL*VLCVSS
Trigger: GGAGCTGACACAGAGGACTCAGAGGACCAGGCTGCT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGCCTGGCTGCCAGCCTaGTGCACAAGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLAWLPA*CTSLST
Trigger: GGTGGAGAGGCTTGTGCAGCAGGCTGGCAGCCAGGC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACTGGAGCATCAGGCATaGCTGGGCCTGATGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLLEHQA*LGLMAG
Trigger: CCCCGCCATCAGGCCCAGGCATGCCTGATGCTCCAG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGCCTGCTCCTGCTTGGTaGAGCCTTTGCTGCGCATGC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGPAPAW*SLCCAC
Trigger: GCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGG...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGGTCCTGCTCCTGCTTaGTGGAGCCTTTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGGPAPA*WSLCCA
Trigger: TGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGACAGAGGCATCAGCCTaGCTGCCAGCCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGTEASA*LPACCT
Trigger: TGTGCAGCAGGCTGGCAGCCAGGCTGATGCCTCTGT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTCTTGGCAGGGGTGCTaGGGCTTAGGGTGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGSWQGC*GLGWGY
Trigger: GTAACCCCACCCTAAGCCCCAGCACCCCTGCCAAGA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGATCTGGTCCCAGGCCTaGCGCTGCTGTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGIWSQA*RCCVVK
Trigger: CTTGACAACACAGCAGCGTCAGGCCTGGGACCAGAT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGCCTGGCGCATCAAGTTaGTGGGTTGAGCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGPGASS*WVEPAR
Trigger: CCTTGCTGGCTCAACCCAGCAACTTGATGCGCCAGG...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAAGGGGGTGCTCAGGCTaGTTGGTCACCAGCACCTCG +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLRGCSG*LVTSTS
Trigger: CGAGGTGCTGGTGACCAAGCAGCCTGAGCACCCCCT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAAGGCATCAGCCTGGCTaGCAGCCTGCTGCACAAGCC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLRHQPG*QPAAQA
Trigger: GGCTTGTGCAGCAGGCTGGCAGCCAGGCTGATGCCT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGGGGACTTGAAGATGTaGAGGCCCACCAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGGDLKM*RPTRSS
Trigger: GCTGCTTCTGGTGGGCCTCCACATCTTCAAGTCCCC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGACACTCCGGACCACCTaGCGCATCAAGTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGTLRTT*RIKLLG
Trigger: ACCCAGCAACTTGATGCGCCAGGTGGTCCGGAGTGT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGCAGTGGCAGCAGGCATaGCACCCTCTGTCACTGCAT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGQWQQA*HPLSLH
Trigger: ATGCAGTGACAGAGGGTGCCATGCCTGCTGCCACTG...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGCTGGTCTTTACCAGTaGCAGCAGGCATGGCACCCT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGAGLYQ*QQAWHP
Trigger: AGGGTGCCATGCCTGCTGCCACTGGTAAAGACCAGC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTTAGGGTGGGGTTACTaGGAGCTGGACTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGLGWGY*ELDSWP
Trigger: GGGCCAAGAGTCCAGCTCCCAGTAACCCCACCCTAA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGCACTCTGTAACAGGCTaGGGCTCCTGCTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGHSVTG*GSCSPE
Trigger: CTCTGGTGAGCAGGAGCCCCAGCCTGTTACAGAGTG...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACCACCCCAAGCCCAGTaGTTAGGCGCTTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLPPQAQ*LGASGH
Trigger: ATGCCCTGAAGCGCCTAATCACTGGGCTTGGGGTGG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACGCCCAAGGGAGCAGTaGGGTCCACAGACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLRPREQ*GPQTAS
Trigger: AGAAGCTGTCTGTGGACCTCACTGCTCCCTTGGGCG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTTCTGTTGCTTGCTCTaGAGCACGCCCAAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGFCCLL*STPKGA
Trigger: TGCTCCCTTGGGCGTGCTTCAGAGCAAGCAACAGAA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTTGGAGCCAGATGAGTaGTTCCCCTGCTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGLEPDE*FPCCRL
Trigger: AAGCCTGCAGCAGGGGAATCACTCATCTGGCTCCAA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTGGTGGAGCCTTTGCTaGGCATGCTGTGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGWWSLC*ACCAGS
Trigger: TGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGCACGACACAGGTGGTaGATGAAGATGCGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLARHRW*MKMRAV
Trigger: GACCGCCCGCATCTTCATGCACCACCTGTGTCGTGC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGCCTCCCCAAGAGTCTaGAGGGTCTGGGTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLASPRV*RVWVAF
Trigger: AAAGGCCACCCAGACCCTGCAGACTCTTGGGGAGGC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGGTGCTGGAAGGCAATaGCCCTGGTCTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLGAGRQ*PWSQRS
Trigger: GCTCCTCTGAGACCAGGGCCATTGCCTTCCAGCACC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACACCTCCACCCATACTaGCTCCTGGGAGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLHLHPY*LLGGFG
Trigger: GCCAAAGCCTCCCAGGAGCCAGTATGGGTGGAGGTG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGGCGCATCAAGTTGCTaGGTTGAGCCAGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGGASSC*VEPART
Trigger: TGTCCTTGCTGGCTCAACCCAGCAACTTGATGCGCC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGAGAGTCTGCAGGGTCTaGGTGGCCTTTCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGRVCRV*VAFPKS
Trigger: ACTCTTGGGAAAGGCCACCCAGACCCTGCAGACTCT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTCTTCTTGCCTGTGCTaGGGGGCTGGTCTTTACCAG +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGSSCLC*GAGLYQ
Trigger: CTGGTAAAGACCAGCCCCCCAGCACAGGCAAGAAGA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGATCACCAACTGCAACTaGTCCTCTGACAGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGITNCN*SSDRSG
Trigger: GCCGCTTCTGTCAGAGGAGCAGTTGCAGTTGGTGAT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACAAAGACCCCACGGTTaGGGTCGTCCAAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLQRPHG*GRPKGR
Trigger: CCTTCCCTTTGGACGACCGCAACCGTGGGGTCTTTG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATTGTGCAGGAGGTCCTaGTCCTGCTTGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLLCRRS*SCLVEP
Trigger: AGGCTCCACCAAGCAGGAGCAGGACCTCCTGCACAA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGACTCTCAGCTCTCGTaGAGACAGAGTCTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGDSQLS*RQSLLE
Trigger: CTCCAGAAGACTCTGTCTGCACGAGAGCTGAGAGTC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGATAGCTCCTTCTGGTaGTCCCCCTTGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLDSSFW*SPLLCA
Trigger: GGCACAGAGCAAGGGGGAGCACCAGAAGGAGCTATC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATCACCTGGGATGGGGTaGTGGCCTTTACCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLSPGMG*WPLPSS
Trigger: GGAAGAGGGTAAAGGCCAGCACCCCATCCCAGGTGA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGTGTCTGCACTCTCCTaGTGGCCACTCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGVSALS*WPLSFS
Trigger: AGAAAAGGAGAGTGGCCAGCAGGAGAGTGCAGACAC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACAGGCTCAGCTTTCGTaGGGCTCTTCATCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLQAQLS*GSSSPP
Trigger: TGGCGGAGATGAAGAGCCCCACGAAAGCTGAGCCTG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGTCCCTGTAAGTGGTTaGGGTGTTGGGACAGGATCT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGVPVSG*GVGTGS
Trigger: AGATCCTGTCCCAACACCCCAACCACTTACAGGGAC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGGATCTCCTGGAACATaGACTCTGGGACCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGGSPGT*TLGPQR
Trigger: TCTCTGAGGTCCCAGAGTCCATGTTCCAGGAGATCC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAAGAAGCAGCAGGTGCTaGAAGGCAATGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLRSSRC*KAMALV
Trigger: GACCAGGGCCATTGCCTTCCAGCACCTGCTGCTTCT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGGTGCTCAGGCTGCTTaGTCACCAGCACCTCGATCA +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLGAQAA*SPAPRS
Trigger: TGATCGAGGTGCTGGTGACCAAGCAGCCTGAGCACC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAACAAGCCTCTCCACCTaGGCATGCAGAGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLTSLST*ACRASA
Trigger: TGCAGAGGCTCTGCATGCCCAGGTGGAGAGGCTTGT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAAGGGCAGACTGGGGGTaGGGGGACTTTCTTATGACC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLRADWG*GDFLMT
Trigger: GGTCATAAGAAAGTCCCCCCACCCCCAGTCTGCCCT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGGGAATATTGTCTTCTaGGAACAGGTCAACCGAGCC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGGNIVF*EQVNRA
Trigger: GGCTCGGTTGACCTGTTCTCAGAAGACAATATTCCC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACGTTTGTCACAGGGCTaGGCACAGCCAGGATTAGCT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLRLSQG*AQPGLA
Trigger: AGCTAATCCTGGCTGTGCTCAGCCCTGTGACAAACG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACATGGGGACCGTAAGTaGGCTGTTACGCTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLHGDRK*AVTLGQ
Trigger: CTGACCAAGCGTAACAGCTCACTTACGGTCCCCATG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGATGTCTTCAAAAGACTaGAACAGCTGTGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGMSSKD*NSCASA
Trigger: GGCGCTGGCACAGCTGTTGCAGTCTTTTGAAGACAT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGCCAGGTCTGGTGTCTaGCTGAACTTCACACTGAGC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLARSGV*LNFTLS
Trigger: GCTCAGTGTGAAGTTCAGGCAGACACCAGACCTGGC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGATCGGCGGGGATTCTaGTCCATGCTTTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGDRRGF*SMLFLM
Trigger: CATCAAGAAAAGCATGGAGCAGAATCCCCGCCGATC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTCTTCGTCCTCTCCATaGTGCAGCTGCTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGSSSSP*CSCFSS
Trigger: TGATGAGAAGCAGCTGCAGCATGGAGAGGACGAAGA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACGCTTAGGGTCATCCTaGCACCCCTCTAGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLRLGSS*HPSRKV
Trigger: TACCTTCCTAGAGGGGTGCCAGGATGACCCTAAGCG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATCCTCATTCCGGGCCTaGATGCGCATCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLSSFRA*MRIFCS
Trigger: AGAGCAGAAGATGCGCATCCAGGCCCGGAATGAGGA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGCAGACAGAGTCTTCTaGAGCATCAGGCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLADRVF*SIRHAW
Trigger: CCAGGCATGCCTGATGCTCCAGAAGACTCTGTCTGC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTCAGCAGCTCCAAGATaGATAGCTCCTTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGSAAPR*IAPSGA
Trigger: AGCACCAGAAGGAGCTATCCATCTTGGAGCTGCTGA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACCTGGGATGGGGTGCTaGCCTTTACCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLPGMGC*PLPSSF
Trigger: AAAGGAAGAGGGTAAAGGCCAGCACCCCATCCCAGG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATGCTTTCAGGCTCTATaGGGGACACAGGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLCFQAL*GTQEWL
Trigger: GAGCCACTCCTGTGTCCCCCATAGAGCCTGAAAGCA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACCTTGCTCTTTTCTTTaGCAGGGCAGACTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLPCSFL*QGRLGV
Trigger: CACCCCCAGTCTGCCCTGCCAAAGAAAAGAGCAAGG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGCTTTCATGTTACCCTTaGGGACCTTTGGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGLSCYP*GPLAGS
Trigger: AGATCCTGCCAAAGGTCCTCAAGGGTAACATGAAAG...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAACTTCCATCAACTGTTaGCGGAAGCCTGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLTSINC*RKPGST
Trigger: TGTGGACCCAGGCTTCCGTCAACAGTTGATGGAAGT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATATTGGTGTTGCCCTTaGGGACTCGCAGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLYWCCP*GLAAGT
Trigger: TGTACCTGCTGCGAGTCCTCAAGGGCAACACCAATA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGACATCACAGCTTTCTaGAGGGGACTTGAAGATGTG +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGDITAF*RGLEDV
Trigger: CACATCTTCAAGTCCCCTGCAGAAAGCTGTGATGTC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGCCTGATGATGCTTTTTaGTTTCAGGCTCTATGGGGG +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGPDDAF*FQALWG
Trigger: CCCCCATAGAGCCTGAAAGCAAAAAGCATCATCAGG...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACACCAGAGACAGCCTTaGTCTTTTCTTTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLHQRQP*SFLWQG
Trigger: GCCCTGCCAAAGAAAAGAGCAAGGCTGTCTCTGGTG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGCCTTTCCCAAGAGTTaGGTAATCAGCTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLAFPKS*VISCSH
Trigger: GTGGGAGCAGCTGATTACCCAACTCTTGGGAAAGGC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAATGGATAGCTCCTTCTaGTGCTCCCCCTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLMDSSF*CSPLLC
Trigger: ACAGAGCAAGGGGGAGCACCAGAAGGAGCTATCCAT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGATCATAGAGGCGATTaGAGCCAGATGAGTGATTCC +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGDHRGD*SQMSDS
Trigger: GGAATCACTCATCTGGCTCCAATCGCCTCTATGATC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGTTATCCCATTCACCTaGGATGGGGTGCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLVIPFT*DGVLAF
Trigger: AAAGGCCAGCACCCCATCCCAGGTGAATGGGATAAC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATCTGGTTGGCAGTGCTaGAGTCAACCAAGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLSGWQC*SQPRSS
Trigger: TGAACTCCTTGGTTGACTTCAGCACTGCCAACCAGA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGACATTAGGCAGCTTGTaGTCCTTCTTGACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGTLGSL*SFLTEL
Trigger: CAACTCTGTCAAGAAGGAGCACAAGCTGCCTAATGT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAAAAGGGAAGGAGAAGTaGTGCTTCGTCTCTGGGATC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLKGKEK*CFVSGI
Trigger: GATCCCAGAGACGAAGCAGCACTTCTCCTTCCCTTT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGCTCCTTTGTGCTGAGTaGCTCCTGATGATGCTTTTT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGLLCAE*LLMMLF
Trigger: AAAAAGCATCATCAGGAGGCACTCAGCACAAAGGAG...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAACCCTTGAGGACCTTTaGCAGGATCTCCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLTLEDL*QDLLEH
Trigger: ATGTTCCAGGAGATCCTGCCAAAGGTCCTCAAGGGT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAATGTTCTCCCCAAAATaGCGGATCAAGTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLMFSPK*RIKSPR
Trigger: GCGAGGAGACTTGATCCGCCATTTTGGGGAGAACAT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGTTTCTTTCGCTTCTTaGTCTCTGGCAAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGVSFAS*SLARIP
Trigger: AGGGATTCTTGCCAGAGACCAAGAAGCGAAAGAAAC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATTTCTTCTGCAGTTTTaGGGTCTTGGCAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLFLLQF*GLGRGA
Trigger: AGCACCCCTGCCAAGACCCCAAAACTGCAGAAGAAA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
3UTR CAA 72 bp CACACGGGCCCTAACCCTGGAAGGTTGAGTCAGAGATaGGCGTCATATAGCATCATGGATTGTTTATTAAAA +
Preference number: 4 (lower is better)
Translates to: HTGPNPGRLSQR*ASYSIMDCLLK
Trigger: TTTTAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGGGTTAGGGCCCGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGTCCATGTCACTCTCTaGGTTCTTATTGTCCTCATT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGVHVTL*VLIVLI
Trigger: AATGAGGACAATAAGAACTCAGAGAGTGACATGGAC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGCTCCGTGTAACTTATaGCCATCTTGGTGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLAPCNL*PSWCLL
Trigger: TAAGAGGCACCAAGATGGTCATAAGTTACACGGAGC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGGCATTCTTCTTTTCTaGCTTTGGACGTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLGILLF*LWTLDS
Trigger: GGAGTCCAACGTCCAAAGTCAGAAAAGAAGAATGCC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTCACACTGGTTACATTaGGGTTATGGTTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGSHWLH*GYGSTA
Trigger: TGCTGTTGAACCATAACCGCAATGTAACCAGTGTGA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR GCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATGGATGCGCATCTTCTaGTCTTTAAATAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLWMRIF*SLNRLA
Trigger: GGCCAGCCTATTTAAAGAGCAGAAGATGCGCATCCA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGCAGGATGTCACACAATaGGATGTCTTCAAAAGACTG +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGQDVTQ*DVFKRL
Trigger: CAGTCTTTTGAAGACATCCCATTGTGTGACATCCTG...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAAAGTGGTTGGGGTGTTaGGACAGGATCTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLKWLGC*DRIFSN
Trigger: ATTGCTGAAGATCCTGTCCCAACACCCCAACCACTT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGGATGTTCACCAGACTaGGAATATTGTCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGGCSPD*EYCLLR
Trigger: TCTCAGAAGACAATATTCCCAGTCTGGTGAACATCC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGTCTTAAAGAAGGCATaGAACAAGCAAAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGVLKKA*NKQNLA
Trigger: AGCCAGGTTTTGCTTGTTCCATGCCTTCTTTAAGAC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACGCAGCATTCTTTTCTaGTGTGGTGCCCTCAGATTT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLRSILF*CGALRF
Trigger: AAATCTGAGGGCACCACACCAGAAAAGAATGCTGCG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR TCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGCTCCATGCTTTTCTTaGTGCAAGTCTGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLAPCFS*CKSECL
Trigger: GAGACATTCAGACTTGCATCAAGAAAAGCATGGAGC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CCA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGTTCTTACAGATCACTaGGTATCTGGAGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLVLTDH*VSGEEA
Trigger: AGCCTCTTCTCCAGATACCCAGTGATCTGTAAGAAC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp GCCAGCCTGCTGCACAAGCCTCTCCACCTGGGCATGCAGAGCCTCTaGACACGGCCCCACCTCGTGGCAGTAGCGGCGGGCACGACACAG +
Preference number: 5 (lower is better)
Translates to: ASLLHKPLHLGMQSL*TRPHLVAVAAGTTQ
Trigger: CTGTGTCGTGCCCGCCGCTACTGCCACGAGGTGGGGCCGTGTGCAGAGGCTCTGCATGCCCAGGTGGAGAGGCTTGTGCAGCAGGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp GCGGCTGTGCTCCAGCAGGCTGTGGCGGTCGCTTTGCGCCGCTTCTaGGGGAGTCGCAGGCTCAGCTTTCGTGGGGCTCTTCATCTCCGC +
Preference number: 5 (lower is better)
Translates to: AAVLQQAVAVALRRF*GSRRLSFRGALHLR
Trigger: GCGGAGATGAAGAGCCCCACGAAAGCTGAGCCTGCGACTCCCGCAGAAGCGGCGCAAAGCGACCGCCACAGCCTGCTGGAGCACAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp TCCAAGAACTCGCGGCTGTGCTCCAGCAGGCTGTGGCGGTCGCTTTaGGCCGCTTCTGCGGGAGTCGCAGGCTCAGCTTTCGTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SKNSRLCSSRLWRSL*AASAGVAGSAFVGL
Trigger: GAGCCCCACGAAAGCTGAGCCTGCGACTCCCGCAGAAGCGGCGCAAAGCGACCGCCACAGCCTGCTGGAGCACAGCCGCGAGTTCTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp TCCCAGAAGAAGTCCAAGAACTCGCGGCTGTGCTCCAGCAGGCTGTaGCGGTCGCTTTGCGCCGCTTCTGCGGGAGTCGCAGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: SQKKSKNSRLCSSRL*RSLCAASAGVAGSA
Trigger: AGCTGAGCCTGCGACTCCCGCAGAAGCGGCGCAAAGCGACCGCCACAGCCTGCTGGAGCACAGCCGCGAGTTCTTGGACTTCTTCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp GACTCTCAGCTCTCGTGCAGACAGAGTCTTCTGGAGCATCAGGCATaGCTGGGCCTGATGGCGGGGCCGAGATGGGCCAGCCACATGCTG +
Preference number: 5 (lower is better)
Translates to: DSQLSCRQSLLEHQA*LGLMAGPRWASHML
Trigger: CAGCATGTGGCTGGCCCATCTCGGCCCCGCCATCAGGCCCAGGCATGCCTGATGCTCCAGAAGACTCTGTCTGCACGAGAGCTGAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp CTTCTGGAGCATCAGGCATGCCTGGGCCTGATGGCGGGGCCGAGATaGGCCAGCCACATGCTGAGCCAGGACGGGAAGCAGGTTCTTACA +
Preference number: 5 (lower is better)
Translates to: LLEHQACLGLMAGPR*ASHMLSQDGKQVLT
Trigger: TGTAAGAACCTGCTTCCCGTCCTGGCTCAGCATGTGGCTGGCCCATCTCGGCCCCGCCATCAGGCCCAGGCATGCCTGATGCTCCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp TCCGGTTTCGCAATGTCCCAGAAGAAGTCCAAGAACTCGCGGCTGTaGTCCAGCAGGCTGTGGCGGTCGCTTTGCGCCGCTTCTGCGGGA +
Preference number: 5 (lower is better)
Translates to: SGFAMSQKKSKNSRL*SSRLWRSLCAASAG
Trigger: TCCCGCAGAAGCGGCGCAAAGCGACCGCCACAGCCTGCTGGAGCACAGCCGCGAGTTCTTGGACTTCTTCTGGGACATTGCGAAACCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp GGGCGGTCTTGTGCAGGAGGTCCTGCTCCTGCTTGGTGGAGCCTTTaGTGCGCATGCTGTGCTGGATCACGTTCAGCAGTGGCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: GRSCAGGPAPAWWSL*CACCAGSRSAVAQV
Trigger: TACTTGAGCCACTGCTGAACGTGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCTCCTGCACAAGACCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp TGGTGCATGAAGATGCGGGCGGTCTTGTGCAGGAGGTCCTGCTCCTaGTTGGTGGAGCCTTTGCTGCGCATGCTGTGCTGGATCACGTTC +
Preference number: 5 (lower is better)
Translates to: WCMKMRAVLCRRSCS*LVEPLLRMLCWITF
Trigger: GAACGTGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCTCCTGCACAAGACCGCCCGCATCTTCATGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp AGCTCCTTCTGGTGCTCCCCCTTGCTCTGTGCCTCCCCAAGAGTCTaGAGGGTCTGGGTGGCCTTTCCCAAGAGTTGGGTAATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SSFWCSPLLCASPRV*RVWVAFPKSWVISC
Trigger: GCAGCTGATTACCCAACTCTTGGGAAAGGCCACCCAGACCCTGCAGACTCTTGGGGAGGCACAGAGCAAGGGGGAGCACCAGAAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp TGTTCAGCAGCTCCAAGATGGATAGCTCCTTCTGGTGCTCCCCCTTaGTCTGTGCCTCCCCAAGAGTCTGCAGGGTCTGGGTGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: CSAAPRWIAPSGAPP*SVPPQESAGSGWPF
Trigger: GAAAGGCCACCCAGACCCTGCAGACTCTTGGGGAGGCACAGAGCAAGGGGGAGCACCAGAAGGAGCTATCCATCTTGGAGCTGCTGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp AAGGACAGCAAGATCTCCACCATCACCTCCACCCATACTGGCTCCTaGGAGGCTTTGGCTCTAGAGCGTGATCGGCGGGGATTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KDSKISTITSTHTGS*EALALERDRRGFCS
Trigger: GGAGCAGAATCCCCGCCGATCACGCTCTAGAGCCAAAGCCTCCCAGGAGCCAGTATGGGTGGAGGTGATGGTGGAGATCTTGCTGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp GCCTGGATGCGCATCTTCTGCTCTTTAAATAGGCTGGCCAGGTTCTaGTCCAGGGCCATCATGGCCTCATCCCCAAGCTCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AWMRIFCSLNRLARF*SRAIMASSPSSSSS
Trigger: GGAGGAGGAGGAGCTTGGGGATGAGGCCATGATGGCCCTGGACCAGAACCTGGCCAGCCTATTTAAAGAGCAGAAGATGCGCATCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp AGGTCCTGCTCCTGCTTGGTGGAGCCTTTGCTGCGCATGCTGTGCTaGATCACGTTCAGCAGTGGCTCAAGTAGTTCCAGGATCAGGGGG +
Preference number: 5 (lower is better)
Translates to: RSCSCLVEPLLRMLC*ITFSSGSSSSRIRG
Trigger: CCCCCTGATCCTGGAACTACTTGAGCCACTGCTGAACGTGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 90 bp CGCAAGTACTCCAACAACTTCTCCGTGGCCCGGAGCCGCGTTTCCTaGTCCGGTTTCGCAATGTCCCAGAAGAAGTCCAAGAACTCGCGG +
Preference number: 5 (lower is better)
Translates to: RKYSNNFSVARSRVS*SGFAMSQKKSKNSR
Trigger: CCGCGAGTTCTTGGACTTCTTCTGGGACATTGCGAAACCGGATCAGGAAACGCGGCTCCGGGCCACGGAGAAGTTGTTGGAGTACTTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp TCCCCAAAATGGCGGATCAAGTCTCCTCGCATCACCAACTGCAACTaGTCCTCTGACAGAAGCGGCAGAGACGCACCCAGTAGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: SPKWRIKSPRITNCN*SSDRSGRDAPSRRK
Trigger: CTTCCGCCTACTGGGTGCGTCTCTGCCGCTTCTGTCAGAGGAGCAGTTGCAGTTGGTGATGCGAGGAGACTTGATCCGCCATTTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp TGGATCACGTTCAGCAGTGGCTCAAGTAGTTCCAGGATCAGGGGGTaGTCAGGCTGCTTGGTCACCAGCACCTCGATCAGGTCTAGTGCC +
Preference number: 5 (lower is better)
Translates to: WITFSSGSSSSRIRG*SGCLVTSTSIRSSA
Trigger: GGCACTAGACCTGATCGAGGTGCTGGTGACCAAGCAGCCTGAGCACCCCCTGATCCTGGAACTACTTGAGCCACTGCTGAACGTGATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp AGGAGGTCCTGCTCCTGCTTGGTGGAGCCTTTGCTGCGCATGCTGTaGTGGATCACGTTCAGCAGTGGCTCAAGTAGTTCCAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: RRSCSCLVEPLLRML*WITFSSGSSSSRIR
Trigger: CCTGATCCTGGAACTACTTGAGCCACTGCTGAACGTGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp TGTGCAGGAGGTCCTGCTCCTGCTTGGTGGAGCCTTTGCTGCGCATaGTGTGCTGGATCACGTTCAGCAGTGGCTCAAGTAGTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: CAGGPAPAWWSLCCA*CAGSRSAVAQVVPG
Trigger: TCCTGGAACTACTTGAGCCACTGCTGAACGTGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCTCCTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp CGGTCTTGTGCAGGAGGTCCTGCTCCTGCTTGGTGGAGCCTTTGCTaGGCATGCTGTGCTGGATCACGTTCAGCAGTGGCTCAAGTAGTT +
Preference number: 5 (lower is better)
Translates to: RSCAGGPAPAWWSLC*ACCAGSRSAVAQVV
Trigger: AACTACTTGAGCCACTGCTGAACGTGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCTCCTGCACAAGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp CTCAACAGAGTGTTCAGCAGCTCCAAGATGGATAGCTCCTTCTGGTaGTCCCCCTTGCTCTGTGCCTCCCCAAGAGTCTGCAGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LNRVFSSSKMDSSFW*SPLLCASPRVCRVW
Trigger: CCAGACCCTGCAGACTCTTGGGGAGGCACAGAGCAAGGGGGAGCACCAGAAGGAGCTATCCATCTTGGAGCTGCTGAACACTCTGTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp CCGAATCATTGGGCCTTGTGCGCAAGTACTCCAACAACTTCTCCGTaGCCCGGAGCCGCGTTTCCTGATCCGGTTTCGCAATGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: PNHWALCASTPTTSP*PGAAFPDPVSQCPR
Trigger: TCTGGGACATTGCGAAACCGGATCAGGAAACGCGGCTCCGGGCCACGGAGAAGTTGTTGGAGTACTTGCGCACAAGGCCCAATGATTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp ACAGAAGCGGCAGAGACGCACCCAGTAGGCGGAAGCACATGTAGCTaGATGTCCAGGACGGATTCTTCAGCAGCCCCTCCTCCAAAACCT +
Preference number: 5 (lower is better)
Translates to: TEAAETHPVGGSTCS*MSRTDSSAAPPPKP
Trigger: AGGTTTTGGAGGAGGGGCTGCTGAAGAATCCGTCCTGGACATCCAGCTACATGTGCTTCCGCCTACTGGGTGCGTCTCTGCCGCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 90 bp CGGAGCCGGAATACAGCTCGCTCAGGCACATTCAACGAGGCGTCCTaGGCTCTCTTCTGGTTGGCAGTGCTGAAGTCAACCAAGGAGTTC +
Preference number: 5 (lower is better)
Translates to: RSRNTARSGTFNEAS*ALFWLAVLKSTKEF
Trigger: GAACTCCTTGGTTGACTTCAGCACTGCCAACCAGAAGAGAGCTCAGGACGCCTCGTTGAATGTGCCTGAGCGAGCTGTATTCCGGCTCCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 90 bp CACCTCCACCCATACTGGCTCCTGGGAGGCTTTGGCTCTAGAGCGTaGTCGGCGGGGATTCTGCTCCATGCTTTTCTTGATGCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: HLHPYWLLGGFGSRA*SAGILLHAFLDASL
Trigger: CAGACTTGCATCAAGAAAAGCATGGAGCAGAATCCCCGCCGATCACGCTCTAGAGCCAAAGCCTCCCAGGAGCCAGTATGGGTGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp CTGACAAAGACCCCACGGTTGCGGTCGTCCAAAGGGAAGGAGAAGTaGTGCTTCGTCTCTGGGATCTGGGGCGTAGCCTTCTTCGTCTTA +
Preference number: 5 (lower is better)
Translates to: LTKTPRLRSSKGKEK*CFVSGIWGVAFFVL
Trigger: TAAGACGAAGAAGGCTACGCCCCAGATCCCAGAGACGAAGCAGCACTTCTCCTTCCCTTTGGACGACCGCAACCGTGGGGTCTTTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp TTCAGCAGTGGCTCAAGTAGTTCCAGGATCAGGGGGTGCTCAGGCTaGTTGGTCACCAGCACCTCGATCAGGTCTAGTGCCCTGATTTGG +
Preference number: 5 (lower is better)
Translates to: FSSGSSSSRIRGCSG*LVTSTSIRSSALIW
Trigger: CCAAATCAGGGCACTAGACCTGATCGAGGTGCTGGTGACCAAGCAGCCTGAGCACCCCCTGATCCTGGAACTACTTGAGCCACTGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp CAGCTGCTCCCACTCAGGATCCTCAAAACAGACTCTCAGCTCTCGTaGAGACAGAGTCTTCTGGAGCATCAGGCATGCCTGGGCCTGATG +
Preference number: 5 (lower is better)
Translates to: QLLPLRILKTDSQLS*RQSLLEHQACLGLM
Trigger: CATCAGGCCCAGGCATGCCTGATGCTCCAGAAGACTCTGTCTGCACGAGAGCTGAGAGTCTGTTTTGAGGATCCTGAGTGGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp GCCTCCCCAAGAGTCTGCAGGGTCTGGGTGGCCTTTCCCAAGAGTTaGGTAATCAGCTGCTCCCACTCAGGATCCTCAAAACAGACTCTC +
Preference number: 5 (lower is better)
Translates to: ASPRVCRVWVAFPKS*VISCSHSGSSKQTL
Trigger: GAGAGTCTGTTTTGAGGATCCTGAGTGGGAGCAGCTGATTACCCAACTCTTGGGAAAGGCCACCCAGACCCTGCAGACTCTTGGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 90 bp GCACATTCAACGAGGCGTCCTGAGCTCTCTTCTGGTTGGCAGTGCTaGAGTCAACCAAGGAGTTCAGGTCAGGCTGCAGGAACATGTCCC +
Preference number: 5 (lower is better)
Translates to: AHSTRRPELSSGWQC*SQPRSSGQAAGTCP
Trigger: GGGACATGTTCCTGCAGCCTGACCTGAACTCCTTGGTTGACTTCAGCACTGCCAACCAGAAGAGAGCTCAGGACGCCTCGTTGAATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 90 bp GCTCAGGCTGCTTGGTCACCAGCACCTCGATCAGGTCTAGTGCCCTaGTTTGGAAGTCCCGTCGGAGCTTCTTCTCCTTCTGTAGCTTGT +
Preference number: 5 (lower is better)
Translates to: AQAAWSPAPRSGLVP*FGSPVGASSPSVAC
Trigger: ACAAGCTACAGAAGGAGAAGAAGCTCCGACGGGACTTCCAAATCAGGGCACTAGACCTGATCGAGGTGCTGGTGACCAAGCAGCCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp ATGTTCTCCCCAAAATGGCGGATCAAGTCTCCTCGCATCACCAACTaGAACTGCTCCTCTGACAGAAGCGGCAGAGACGCACCCAGTAGG +
Preference number: 5 (lower is better)
Translates to: MFSPKWRIKSPRITN*NCSSDRSGRDAPSR
Trigger: CCTACTGGGTGCGTCTCTGCCGCTTCTGTCAGAGGAGCAGTTGCAGTTGGTGATGCGAGGAGACTTGATCCGCCATTTTGGGGAGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp ACAAAGACCCCACGGTTGCGGTCGTCCAAAGGGAAGGAGAAGTGCTaGTTCGTCTCTGGGATCTGGGGCGTAGCCTTCTTCGTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: TKTPRLRSSKGKEKC*FVSGIWGVAFFVLK
Trigger: CTTTAAGACGAAGAAGGCTACGCCCCAGATCCCAGAGACGAAGCAGCACTTCTCCTTCCCTTTGGACGACCGCAACCGTGGGGTCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp CTCCTAGCATCCTCATGGCCTGCCAGTAGAGATCATAGAGGCGATTaGAGCCAGATGAGTGATTCCCCTGCTGCAGGCTTTGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LLASSWPASRDHRGD*SQMSDSPAAGFAAA
Trigger: AGCTGCAGCAAAGCCTGCAGCAGGGGAATCACTCATCTGGCTCCAATCGCCTCTATGATCTCTACTGGCAGGCCATGAGGATGCTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 90 bp GCCAGGATTAGCTGCAGACAACGTGGAGTAAGGTGGGGACAGATATaGCCAAATACACTCCGGACCACCTGGCGCATCAAGTTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ARISCRQRGVRWGQI*PNTLRTTWRIKLLG
Trigger: ACCCAGCAACTTGATGCGCCAGGTGGTCCGGAGTGTATTTGGTCATATCTGTCCCCACCTTACTCCACGTTGTCTGCAGCTAATCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp TTAGGCGCTTCAGGGCATATTTCATCTCCGAATCATTGGGCCTTGTaGGCAAGTACTCCAACAACTTCTCCGTGGCCCGGAGCCGCGTTT +
Preference number: 5 (lower is better)
Translates to: LGASGHISSPNHWAL*ASTPTTSPWPGAAF
Trigger: AAACGCGGCTCCGGGCCACGGAGAAGTTGTTGGAGTACTTGCGCACAAGGCCCAATGATTCGGAGATGAAATATGCCCTGAAGCGCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp TGTCCCTGTAAGTGGTTGGGGTGTTGGGACAGGATCTTCAGCAATTaGACGGACTTCATCAGGGCCTCTTTGTCCTTCACTAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: CPCKWLGCWDRIFSN*TDFIRASLSFTRRP
Trigger: AGGCCGCCTAGTGAAGGACAAAGAGGCCCTGATGAAGTCCGTGCAATTGCTGAAGATCCTGTCCCAACACCCCAACCACTTACAGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 90 bp GCTCCAAGTACTTGGGAGAGCGGAGGATCACTTTCATGTTACCCTTaGGGACCTTTGGCAGGATCTCCTGGAACATGGACTCTGGGACCT +
Preference number: 5 (lower is better)
Translates to: APSTWESGGSLSCYP*GPLAGSPGTWTLGP
Trigger: AGGTCCCAGAGTCCATGTTCCAGGAGATCCTGCCAAAGGTCCTCAAGGGTAACATGAAAGTGATCCTCCGCTCTCCCAAGTACTTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 90 bp CTGGCTATTTGCTCAACCACAGCTTCATCCTTCTCCAGATGCAAATaGTCCACAAGGCTGACCAGGCGGTGGATGATCCACTTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LAICSTTASSFSRCK*STRLTRRWMIHFRS
Trigger: GCTCCGGAAGTGGATCATCCACCGCCTGGTCAGCCTTGTGGATCATTTGCATCTGGAGAAGGATGAAGCTGTGGTTGAGCAAATAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 90 bp CGGGCCTCTAATTCCTTCAGAGTACTCATCATCTGGTCCCAGGCCTaGCGCTGCTGTGTTGTCAAGGATGTCACACTGGTTACATTGCGG +
Preference number: 5 (lower is better)
Translates to: RASNSFRVLIIWSQA*RCCVVKDVTLVTLR
Trigger: CCGCAATGTAACCAGTGTGACATCCTTGACAACACAGCAGCGTCAGGCCTGGGACCAGATGATGAGTACTCTGAAGGAATTAGAGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp GACAGATATGACCAAATACACTCCGGACCACCTGGCGCATCAAGTTaGTGGGTTGAGCCAGCAAGGACAGCAAGATCTCCACCATCACCT +
Preference number: 5 (lower is better)
Translates to: DRYDQIHSGPPGASS*WVEPARTARSPPSP
Trigger: AGGTGATGGTGGAGATCTTGCTGTCCTTGCTGGCTCAACCCAGCAACTTGATGCGCCAGGTGGTCCGGAGTGTATTTGGTCATATCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp TCCACCAGAGCCTTTATTGGCTGTCCCTGTAAGTGGTTGGGGTGTTaGGACAGGATCTTCAGCAATTGCACGGACTTCATCAGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: STRAFIGCPCKWLGC*DRIFSNCTDFIRAS
Trigger: AGAGGCCCTGATGAAGTCCGTGCAATTGCTGAAGATCCTGTCCCAACACCCCAACCACTTACAGGGACAGCCAATAAAGGCTCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp CTTGGGAGAGCGGAGGATCACTTTCATGTTACCCTTGAGGACCTTTaGCAGGATCTCCTGGAACATGGACTCTGGGACCTCAGAGAGGAT +
Preference number: 5 (lower is better)
Translates to: LGRAEDHFHVTLEDL*QDLLEHGLWDLRED
Trigger: ATCCTCTCTGAGGTCCCAGAGTCCATGTTCCAGGAGATCCTGCCAAAGGTCCTCAAGGGTAACATGAAAGTGATCCTCCGCTCTCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp AGATATGACCAAATACACTCCGGACCACCTGGCGCATCAAGTTGCTaGGTTGAGCCAGCAAGGACAGCAAGATCTCCACCATCACCTCCA +
Preference number: 5 (lower is better)
Translates to: RYDQIHSGPPGASSC*VEPARTARSPPSPP
Trigger: TGGAGGTGATGGTGGAGATCTTGCTGTCCTTGCTGGCTCAACCCAGCAACTTGATGCGCCAGGTGGTCCGGAGTGTATTTGGTCATATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp GGCTGCTTGGTCACCAGCACCTCGATCAGGTCTAGTGCCCTGATTTaGAAGTCCCGTCGGAGCTTCTTCTCCTTCTGTAGCTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: GCLVTSTSIRSSALI*KSRRSFFSFCSLFF
Trigger: GAAAAACAAGCTACAGAAGGAGAAGAAGCTCCGACGGGACTTCCAAATCAGGGCACTAGACCTGATCGAGGTGCTGGTGACCAAGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 90 bp TGTAGCTTGTTTTTCTCCTCATTCCGGGCCTGGATGCGCATCTTCTaGTCTTTAAATAGGCTGGCCAGGTTCTGGTCCAGGGCCATCATG +
Preference number: 5 (lower is better)
Translates to: CSLFFSSFRAWMRIF*SLNRLARFWSRAIM
Trigger: CATGATGGCCCTGGACCAGAACCTGGCCAGCCTATTTAAAGAGCAGAAGATGCGCATCCAGGCCCGGAATGAGGAGAAAAACAAGCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp GTTGTAAAGGCCACCATCATAGTCAACTGCCGCTTAGGGTCATCCTaGCACCCCTCTAGGAAGGTACCCACGTATGTACTTATCTCTGGG +
Preference number: 5 (lower is better)
Translates to: VVKATIIVNCRLGSS*HPSRKVPTYVLISG
Trigger: CCCAGAGATAAGTACATACGTGGGTACCTTCCTAGAGGGGTGCCAGGATGACCCTAAGCGGCAGTTGACTATGATGGTGGCCTTTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTCGAATCTGCTCTCCTaGAGCGCCAGGCGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGSNLLS*SARRSR
Trigger: CCTGCTCCGCCTGGCGCTCAAGGAGAGCAGATTCGA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 90 bp ACGGACTTCATCAGGGCCTCTTTGTCCTTCACTAGGCGGCCTGACTaGAAGAGGGCTAGCACTCCAAAAAGGTTTGCAAAGAGACTAGGT +
Preference number: 5 (lower is better)
Translates to: TDFIRASLSFTRRPD*KRASTPKRFAKRLG
Trigger: ACCTAGTCTCTTTGCAAACCTTTTTGGAGTGCTAGCCCTCTTTCAGTCAGGCCGCCTAGTGAAGGACAAAGAGGCCCTGATGAAGTCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTTCTGGTGCTCCCCCTaGCTCTGTGCCTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGFWCSP*LCASPR
Trigger: TCTTGGGGAGGCACAGAGCAAGGGGGAGCACCAGAA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp AGCTTCTTCTCCTTCTGTAGCTTGTTTTTCTCCTCATTCCGGGCCTaGATGCGCATCTTCTGCTCTTTAAATAGGCTGGCCAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SFFSFCSLFFSSFRA*MRIFCSLNRLARFW
Trigger: CCAGAACCTGGCCAGCCTATTTAAAGAGCAGAAGATGCGCATCCAGGCCCGGAATGAGGAGAAAAACAAGCTACAGAAGGAGAAGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGAGCTTGTGCTCCTTCTaGACAGAGTTGGCGGCCACC +
Preference number: 5 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGSLCSF*TELAAT
Trigger: GGTGGCCGCCAACTCTGTCAAGAAGGAGCACAAGCT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAAGGTCCTGCTCCTGCTaGGTGGAGCCTTTGCTGCGC +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLRSCSC*VEPLLR
Trigger: GCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAAAGATGCGGGCGGTCTaGTGCAGGAGGTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLKMRAV*CRRSCS
Trigger: GGAGCAGGACCTCCTGCACAAGACCGCCCGCATCTT...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 90 bp CATTCTTCTTTTCTGACTTTGGACGTTGGACTCCTAGCATCCTCATaGCCTGCCAGTAGAGATCATAGAGGCGATTGGAGCCAGATGAGT +
Preference number: 5 (lower is better)
Translates to: HSSFLTLDVGLLASS*PASRDHRGDWSQMS
Trigger: ACTCATCTGGCTCCAATCGCCTCTATGATCTCTACTGGCAGGCCATGAGGATGCTAGGAGTCCAACGTCCAAAGTCAGAAAAGAAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGAAGAGCTCCAAGTACTaGGGAGAGCGGAGGATCACT +
Preference number: 5 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGKSSKY*GERRIT
Trigger: AGTGATCCTCCGCTCTCCCAAGTACTTGGAGCTCTT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACTTTCTGCAGGGGACTaGAAGATGTGGAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLLSAGD*KMWRPT
Trigger: GGTGGGCCTCCACATCTTCAAGTCCCCTGCAGAAAG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGCCTTGCTCTTTTCTTaGGCAGGGCAGACTGGGGGT +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLALLFS*AGQTGG
Trigger: ACCCCCAGTCTGCCCTGCCAAAGAAAAGAGCAAGGC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATGTCCCTGTAAGTGGTaGGGGTGTTGGGACAGGATC +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLCPCKW*GCWDRI
Trigger: GATCCTGTCCCAACACCCCAACCACTTACAGGGACA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACCTGGGTCCACATCTTaGTCACGGTCCTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLPGSTS*SRSSSS
Trigger: TGAAGAGGAGGACCGTGACAAAGATGTGGACCCAGG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTCTTGGTGCCTCTTATaGGTGTTGCCCTTGAGGACT +
Preference number: 5 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGSWCLL*VLPLRT
Trigger: AGTCCTCAAGGGCAACACCAATAAGAGGCACCAAGA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGGCCTTTCCCAAGAGTaGGGTAATCAGCTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLGLSQE*GNQLLP
Trigger: TGGGAGCAGCTGATTACCCAACTCTTGGGAAAGGCC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATTGCTGCAGCTTCTGTaGCTTGCTCTGAAGCACGCC +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLLLQLL*LALKHA
Trigger: GGCGTGCTTCAGAGCAAGCAACAGAAGCTGCAGCAA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACCACCAGAGCCTTTATaGGCTGTCCCTGTAAGTGGT +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLPPEPL*AVPVSG
Trigger: ACCACTTACAGGGACAGCCAATAAAGGCTCTGGTGG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGGCAAAACCTGGCTATTaGCTCAACCACAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGAKPGY*LNHSFI
Trigger: GATGAAGCTGTGGTTGAGCAAATAGCCAGGTTTTGC...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTACATCAAGTTGCTGGGTaGAGCCAGCAAGGACAGCAA +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLHQVAG*SQQGQQ
Trigger: TTGCTGTCCTTGCTGGCTCAACCCAGCAACTTGATG...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGAGTTTCTTTCGCTTCTaGGTCTCTGGCAAGAATCCC +
Preference number: 5 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGSFFRF*VSGKNP
Trigger: GGGATTCTTGCCAGAGACCAAGAAGCGAAAGAAACT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATCACCAGAGACAGCCTaGCTCTTTTCTTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLSPETA*LFSLAG
Trigger: CCCTGCCAAAGAAAAGAGCAAGGCTGTCTCTGGTGA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTAGCCACTCTCCTTTTCTaGACCCCACTCTGTAACAGG +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLATLLF*TPLCNR
Trigger: CCTGTTACAGAGTGGGGTCAAGAAAAGGAGAGTGGC...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGACCAGACTGGGAATATaGTCTTCTGAGAACAGGTCA +
Preference number: 5 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGTRLGI*SSENRS
Trigger: TGACCTGTTCTCAGAAGACAATATTCCCAGTCTGGT...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATTCTCCTTCTGTAGCTaGTTTTTCTCCTCATTCCGG +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLFSFCS*FFSSFR
Trigger: CCGGAATGAGGAGAAAAACAAGCTACAGAAGGAGAA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp CCTGGAAGGTTGAGTCAGAGATTGGCGTCATATAGCATCATGGATTGTTTATTATCTTCTTTTCTGACTTaGGACGTTGGACTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: PGRLSQRLASYSIMDCLLSSFLT*DVGLLA
Trigger: TGCTAGGAGTCCAACGTCCAAAGTCAGAAAAGAAGA...TAATAAACAATCCATGATGCTATATGACGCCAATCTCTGACTCAACCTTCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS-3UTR CAA 90 bp ATAAACCTATTTAAATGTTTTGGTGGCTCTCCAGTGGAACAACCTGGGGAAGGGTCACTAGGAATATCCTaGGCATTCTTCTTTTCTGAC +
Preference number: 5 (lower is better)
Translates to: INLFKCFGGSPVEQPGEGSLGIS*AFFFSD
Trigger: GTCAGAAAAGAAGAATGCCAAGGATATTCCTAGTGA...CCCTTCCCCAGGTTGTTCCACTGGAGAGCCACCAAAACATTTAAATAGGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp CTGCACAAGCCTCTCCACCTGGGCATGCAGAGCCTCTaGACACGGCCCCACCTCGTGGCAGTAGCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: LHKPLHLGMQSL*TRPHLVAVAAG
Trigger: GCCCGCCGCTACTGCCACGAGGTGGGGCCGTGTGCAGAGGCTCTGCATGCCCAGGTGGAGAGGCTTGTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp CTGCCAGCCTGCTGCACAAGCCTCTCCACCTGGGCATaGAGAGCCTCTGCACACGGCCCCACCTCGTGGCAG +
Preference number: 6 (lower is better)
Translates to: LPACCTSLSTWA*RASAHGPTSWQ
Trigger: CTGCCACGAGGTGGGGCCGTGTGCAGAGGCTCTGCATGCCCAGGTGGAGAGGCTTGTGCAGCAGGCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp GTCCAAGAACTCGCGGCTGTGCTCCAGCAGGCTGTGGCGGTCGCTTaGCGCCGCTTCTGCGGGAGTCGCAGGCTCAGCTTTCGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: VQELAAVLQQAVAVA*RRFCGSRRLSFRGA
Trigger: AGCCCCACGAAAGCTGAGCCTGCGACTCCCGCAGAAGCGGCGCAAAGCGACCGCCACAGCCTGCTGGAGCACAGCCGCGAGTTCTTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp CTCTCGTGCAGACAGAGTCTTCTGGAGCATCAGGCATaGCTGGGCCTGATGGCGGGGCCGAGATGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LSCRQSLLEHQA*LGLMAGPRWAS
Trigger: GCTGGCCCATCTCGGCCCCGCCATCAGGCCCAGGCATGCCTGATGCTCCAGAAGACTCTGTCTGCACGAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp AAGTCCAAGAACTCGCGGCTGTGCTCCAGCAGGCTGTaGCGGTCGCTTTGCGCCGCTTCTGCGGGAGTCGCA +
Preference number: 6 (lower is better)
Translates to: KSKNSRLCSSRL*RSLCAASAGVA
Trigger: TGCGACTCCCGCAGAAGCGGCGCAAAGCGACCGCCACAGCCTGCTGGAGCACAGCCGCGAGTTCTTGGACTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp AAGATGCGGGCGGTCTTGTGCAGGAGGTCCTGCTCCTaGTTGGTGGAGCCTTTGCTGCGCATGCTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: KMRAVLCRRSCS*LVEPLLRMLCW
Trigger: CCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCTCCTGCACAAGACCGCCCGCATCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp TTGAAGATGTGGAGGCCCACCAGAAGCAGCAGGTGCTaGAAGGCAATGGCCCTGGTCTCAGAGGAGCGGGCC +
Preference number: 6 (lower is better)
Translates to: LKMWRPTRSSRC*KAMALVSEERA
Trigger: GGCCCGCTCCTCTGAGACCAGGGCCATTGCCTTCCAGCACCTGCTGCTTCTGGTGGGCCTCCACATCTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp GGGCGGTCTTGTGCAGGAGGTCCTGCTCCTGCTTGGTaGAGCCTTTGCTGCGCATGCTGTGCTGGATCACGT +
Preference number: 6 (lower is better)
Translates to: GRSCAGGPAPAW*SLCCACCAGSR
Trigger: ACGTGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCTCCTGCACAAGACCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp TGCGGGCGGTCTTGTGCAGGAGGTCCTGCTCCTGCTTaGTGGAGCCTTTGCTGCGCATGCTGTGCTGGATCA +
Preference number: 6 (lower is better)
Translates to: CGRSCAGGPAPA*WSLCCACCAGS
Trigger: TGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCTCCTGCACAAGACCGCCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp CGGGCGGTCTTGTGCAGGAGGTCCTGCTCCTGCTTGGTGGAGCCTTaGCTGCGCATGCTGTGCTGGATCACGTTCAGCAGTGGCTCAAGT +
Preference number: 6 (lower is better)
Translates to: RAVLCRRSCSCLVEP*LRMLCWITFSSGSS
Trigger: ACTTGAGCCACTGCTGAACGTGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCTCCTGCACAAGACCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp ACCCCACGGTTGCGGTCGTCCAAAGGGAAGGAGAAGTaGTGCTTCGTCTCTGGGATCTGGGGCGTAGCCTTC +
Preference number: 6 (lower is better)
Translates to: TPRLRSSKGKEK*CFVSGIWGVAF
Trigger: GAAGGCTACGCCCCAGATCCCAGAGACGAAGCAGCACTTCTCCTTCCCTTTGGACGACCGCAACCGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp TGGTGCTCCCCCTTGCTCTGTGCCTCCCCAAGAGTCTaGAGGGTCTGGGTGGCCTTTCCCAAGAGTTGGGTA +
Preference number: 6 (lower is better)
Translates to: WCSPLLCASPRV*RVWVAFPKSWV
Trigger: TACCCAACTCTTGGGAAAGGCCACCCAGACCCTGCAGACTCTTGGGGAGGCACAGAGCAAGGGGGAGCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp GCTCCAAGATGGATAGCTCCTTCTGGTGCTCCCCCTTaGTCTGTGCCTCCCCAAGAGTCTGCAGGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: APRWIAPSGAPP*SVPPQESAGSG
Trigger: CCCAGACCCTGCAGACTCTTGGGGAGGCACAGAGCAAGGGGGAGCACCAGAAGGAGCTATCCATCTTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp GCCAGGCGGAGCAGGTCCAGAGCCACATTAGGCAGCTaGTGCTCCTTCTTGACAGAGTTGGCGGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: ARRSRSRATLGS*CSFLTELAATF
Trigger: GAAGGTGGCCGCCAACTCTGTCAAGAAGGAGCACAAGCTGCCTAATGTGGCTCTGGACCTGCTCCGCCTGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp ACCATCACCTCCACCCATACTGGCTCCTGGGAGGCTTaGGCTCTAGAGCGTGATCGGCGGGGATTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: TITSTHTGSWEA*ALERDRRGFCS
Trigger: GGAGCAGAATCCCCGCCGATCACGCTCTAGAGCCAAAGCCTCCCAGGAGCCAGTATGGGTGGAGGTGATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp TGCATGAAGATGCGGGCGGTCTTGTGCAGGAGGTCCTGCTCCTGCTaGGTGGAGCCTTTGCTGCGCATGCTGTGCTGGATCACGTTCAGC +
Preference number: 6 (lower is better)
Translates to: CMKMRAVLCRRSCSC*VEPLLRMLCWITFS
Trigger: GCTGAACGTGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACCTCCTGCACAAGACCGCCCGCATCTTCATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp CCACGGTTGCGGTCGTCCAAAGGGAAGGAGAAGTGCTaGTTCGTCTCTGGGATCTGGGGCGTAGCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: PRLRSSKGKEKC*FVSGIWGVAFF
Trigger: GAAGAAGGCTACGCCCCAGATCCCAGAGACGAAGCAGCACTTCTCCTTCCCTTTGGACGACCGCAACCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp GGCTCAAGTAGTTCCAGGATCAGGGGGTGCTCAGGCTaGTTGGTCACCAGCACCTCGATCAGGTCTAGTGCC +
Preference number: 6 (lower is better)
Translates to: GSSSSRIRGCSG*LVTSTSIRSSA
Trigger: GGCACTAGACCTGATCGAGGTGCTGGTGACCAAGCAGCCTGAGCACCCCCTGATCCTGGAACTACTTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp AAGATCTCCACCATCACCTCCACCCATACTGGCTCCTaGGAGGCTTTGGCTCTAGAGCGTGATCGGCGGGGA +
Preference number: 6 (lower is better)
Translates to: KISTITSTHTGS*EALALERDRRG
Trigger: TCCCCGCCGATCACGCTCTAGAGCCAAAGCCTCCCAGGAGCCAGTATGGGTGGAGGTGATGGTGGAGATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp TCCTTGAGCGCCAGGCGGAGCAGGTCCAGAGCCACATTAGGCAGCTaGTGCTCCTTCTTGACAGAGTTGGCGGCCACCTTCAGGATGTTC +
Preference number: 6 (lower is better)
Translates to: SLSARRSRSRATLGS*CSFLTELAATFRMF
Trigger: GAACATCCTGAAGGTGGCCGCCAACTCTGTCAAGAAGGAGCACAAGCTGCCTAATGTGGCTCTGGACCTGCTCCGCCTGGCGCTCAAGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp ACACTCCGGACCACCTGGCGCATCAAGTTGCTGGGTTaGGCCAGCAAGGACAGCAAGATCTCCACCATCACC +
Preference number: 6 (lower is better)
Translates to: TLRTTWRIKLLG*ASKDSKISTIT
Trigger: GGTGATGGTGGAGATCTTGCTGTCCTTGCTGGCTCAACCCAGCAACTTGATGCGCCAGGTGGTCCGGAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp TGCTGCAGGCTTTGCTGCAGCTTCTGTTGCTTGCTCTaGAGCACGCCCAAGGGAGCAGTGAGGTCCACAGAC +
Preference number: 6 (lower is better)
Translates to: CCRLCCSFCCLL*STPKGAVRSTD
Trigger: GTCTGTGGACCTCACTGCTCCCTTGGGCGTGCTTCAGAGCAAGCAACAGAAGCTGCAGCAAAGCCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp TTCAGCAGTGGCTCAAGTAGTTCCAGGATCAGGGGGTaGTCAGGCTGCTTGGTCACCAGCACCTCGATCAGG +
Preference number: 6 (lower is better)
Translates to: FSSGSSSSRIRG*SGCLVTSTSIR
Trigger: CCTGATCGAGGTGCTGGTGACCAAGCAGCCTGAGCACCCCCTGATCCTGGAACTACTTGAGCCACTGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp GGTCCTGCTCCTGCTTGGTGGAGCCTTTGCTGCGCATaGTGTGCTGGATCACGTTCAGCAGTGGCTCAAGTA +
Preference number: 6 (lower is better)
Translates to: GPAPAWWSLCCA*CAGSRSAVAQV
Trigger: TACTTGAGCCACTGCTGAACGTGATCCAGCACAGCATGCGCAGCAAAGGCTCCACCAAGCAGGAGCAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp GTGTTCAGCAGCTCCAAGATGGATAGCTCCTTCTGGTaGTCCCCCTTGCTCTGTGCCTCCCCAAGAGTCTGC +
Preference number: 6 (lower is better)
Translates to: VFSSSKMDSSFW*SPLLCASPRVC
Trigger: GCAGACTCTTGGGGAGGCACAGAGCAAGGGGGAGCACCAGAAGGAGCTATCCATCTTGGAGCTGCTGAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp CCATGCTGCAGCTGCTTCTCATCAGCGTCATCAGTGACCACCACGTaGTCATCCTCATCCTCGTTTGTCACAGGGCTGAGCACAGCCAGG +
Preference number: 6 (lower is better)
Translates to: PCCSCFSSASSVTTT*SSSSSFVTGLSTAR
Trigger: CCTGGCTGTGCTCAGCCCTGTGACAAACGAGGATGAGGATGACAACGTGGTGGTCACTGATGACGCTGATGAGAAGCAGCTGCAGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp TCCAACAACTTCTCCGTGGCCCGGAGCCGCGTTTCCTaGTCCGGTTTCGCAATGTCCCAGAAGAAGTCCAAG +
Preference number: 6 (lower is better)
Translates to: SNNFSVARSRVS*SGFAMSQKKSK
Trigger: CTTGGACTTCTTCTGGGACATTGCGAAACCGGATCAGGAAACGCGGCTCCGGGCCACGGAGAAGTTGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp ACGAGGCGTCCTGAGCTCTCTTCTGGTTGGCAGTGCTaGAGTCAACCAAGGAGTTCAGGTCAGGCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: TRRPELSSGWQC*SQPRSSGQAAG
Trigger: TCCTGCAGCCTGACCTGAACTCCTTGGTTGACTTCAGCACTGCCAACCAGAAGAGAGCTCAGGACGCCTCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp AGCAGGCATGGCACCCTCTGTCACTGCATCCTGCTGTaGCGCAGCATTCTTTTCTGGTGTGGTGCCCTCAGA +
Preference number: 6 (lower is better)
Translates to: SRHGTLCHCILL*RSILFWCGALR
Trigger: TCTGAGGGCACCACACCAGAAAAGAATGCTGCGTCACAGCAGGATGCAGTGACAGAGGGTGCCATGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp ACACAATGGGATGTCTTCAAAAGACTGCAACAGCTGTaGCAGCGCCAGGCTGTAGCAGGGCCTAGCGGCTTC +
Preference number: 6 (lower is better)
Translates to: TQWDVFKRLQQL*QRQAVAGPSGF
Trigger: GAAGCCGCTAGGCCCTGCTACAGCCTGGCGCTGGCACAGCTGTTGCAGTCTTTTGAAGACATCCCATTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp CGCATCTTCTGCTCTTTAAATAGGCTGGCCAGGTTCTaGTCCAGGGCCATCATGGCCTCATCCCCAAGCTCC +
Preference number: 6 (lower is better)
Translates to: RIFCSLNRLARF*SRAIMASSPSS
Trigger: GGAGCTTGGGGATGAGGCCATGATGGCCCTGGACCAGAACCTGGCCAGCCTATTTAAAGAGCAGAAGATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp AGAGTGTTCAGCAGCTCCAAGATGGATAGCTCCTTCTaGTGCTCCCCCTTGCTCTGTGCCTCCCCAAGAGTC +
Preference number: 6 (lower is better)
Translates to: RVFSSSKMDSSF*CSPLLCASPRV
Trigger: GACTCTTGGGGAGGCACAGAGCAAGGGGGAGCACCAGAAGGAGCTATCCATCTTGGAGCTGCTGAACACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp TACACTCCGGACCACCTGGCGCATCAAGTTGCTGGGTaGAGCCAGCAAGGACAGCAAGATCTCCACCATCAC +
Preference number: 6 (lower is better)
Translates to: YTPDHLAHQVAG*SQQGQQDLHHH
Trigger: GTGATGGTGGAGATCTTGCTGTCCTTGCTGGCTCAACCCAGCAACTTGATGCGCCAGGTGGTCCGGAGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp ATGACCAAATACACTCCGGACCACCTGGCGCATCAAGTTGCTGGGTaGAGCCAGCAAGGACAGCAAGATCTCCACCATCACCTCCACCCA +
Preference number: 6 (lower is better)
Translates to: MTKYTPDHLAHQVAG*SQQGQQDLHHHLHP
Trigger: TGGGTGGAGGTGATGGTGGAGATCTTGCTGTCCTTGCTGGCTCAACCCAGCAACTTGATGCGCCAGGTGGTCCGGAGTGTATTTGGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp TCCAGGGCCATCATGGCCTCATCCCCAAGCTCCTCCTCCTCCTCGTaGTCCACTCCACCCAATGCATTCCCAGCTTTTAACACTTCCATC +
Preference number: 6 (lower is better)
Translates to: SRAIMASSPSSSSSS*STPPNAFPAFNTSI
Trigger: GATGGAAGTGTTAAAAGCTGGGAATGCATTGGGTGGAGTGGACAACGAGGAGGAGGAGGAGCTTGGGGATGAGGCCATGATGGCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp TGCCTCCCCAAGAGTCTGCAGGGTCTGGGTGGCCTTTCCCAAGAGTaGGGTAATCAGCTGCTCCCACTCAGGATCCTCAAAACAGACTCT +
Preference number: 6 (lower is better)
Translates to: CLPKSLQGLGGLSQE*GNQLLPLRILKTDS
Trigger: AGAGTCTGTTTTGAGGATCCTGAGTGGGAGCAGCTGATTACCCAACTCTTGGGAAAGGCCACCCAGACCCTGCAGACTCTTGGGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp TGTCTCCTAGGACATCACAGCTTTCTGCAGGGGACTTaGAGATGTGGAGGCCCACCAGAAGCAGCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: CLLGHHSFLQGT*RCGGPPEAAGA
Trigger: AGCACCTGCTGCTTCTGGTGGGCCTCCACATCTTCAAGTCCCCTGCAGAAAGCTGTGATGTCCTAGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp CCATACTGGCTCCTGGGAGGCTTTGGCTCTAGAGCGTaGTCGGCGGGGATTCTGCTCCATGCTTTTCTTGAT +
Preference number: 6 (lower is better)
Translates to: PYWLLGGFGSRA*SAGILLHAFLD
Trigger: ATCAAGAAAAGCATGGAGCAGAATCCCCGCCGATCACGCTCTAGAGCCAAAGCCTCCCAGGAGCCAGTATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp CCCAAGGGAGCAGTGAGGTCCACAGACAGCTTCTCGTaGTTGACTGTCCTCAACAGAGTGTTCAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: PKGAVRSTDSFS*LTVLNRVFSSS
Trigger: GGAGCTGCTGAACACTCTGTTGAGGACAGTCAATCACGAGAAGCTGTCTGTGGACCTCACTGCTCCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp CCAAAATGGCGGATCAAGTCTCCTCGCATCACCAACTaGAACTGCTCCTCTGACAGAAGCGGCAGAGACGCA +
Preference number: 6 (lower is better)
Translates to: PKWRIKSPRITN*NCSSDRSGRDA
Trigger: TGCGTCTCTGCCGCTTCTGTCAGAGGAGCAGTTGCAGTTGGTGATGCGAGGAGACTTGATCCGCCATTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp GACCAAATACACTCCGGACCACCTGGCGCATCAAGTTaGTGGGTTGAGCCAGCAAGGACAGCAAGATCTCCA +
Preference number: 6 (lower is better)
Translates to: DQIHSGPPGASS*WVEPARTARSP
Trigger: TGGAGATCTTGCTGTCCTTGCTGGCTCAACCCAGCAACTTGATGCGCCAGGTGGTCCGGAGTGTATTTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp CAAATACACTCCGGACCACCTGGCGCATCAAGTTGCTaGGTTGAGCCAGCAAGGACAGCAAGATCTCCACCA +
Preference number: 6 (lower is better)
Translates to: QIHSGPPGASSC*VEPARTARSPP
Trigger: TGGTGGAGATCTTGCTGTCCTTGCTGGCTCAACCCAGCAACTTGATGCGCCAGGTGGTCCGGAGTGTATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp GTCACCAGCACCTCGATCAGGTCTAGTGCCCTGATTTaGAAGTCCCGTCGGAGCTTCTTCTCCTTCTGTAGC +
Preference number: 6 (lower is better)
Translates to: VTSTSIRSSALI*KSRRSFFSFCS
Trigger: GCTACAGAAGGAGAAGAAGCTCCGACGGGACTTCCAAATCAGGGCACTAGACCTGATCGAGGTGCTGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp CTGAGCCAGGACGGGAAGCAGGTTCTTACAGATCACTaGGTATCTGGAGAAGAGGCTGAGGAACATGGGGAC +
Preference number: 6 (lower is better)
Translates to: LSQDGKQVLTDH*VSGEEAEEHGD
Trigger: GTCCCCATGTTCCTCAGCCTCTTCTCCAGATACCCAGTGATCTGTAAGAACCTGCTTCCCGTCCTGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp AGGTCCAGAGCCACATTAGGCAGCTTGTGCTCCTTCTaGACAGAGTTGGCGGCCACCTTCAGGATGTTCACC +
Preference number: 6 (lower is better)
Translates to: RSRATLGSLCSF*TELAATFRMFT
Trigger: GGTGAACATCCTGAAGGTGGCCGCCAACTCTGTCAAGAAGGAGCACAAGCTGCCTAATGTGGCTCTGGACCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp AGTAGGCTGAAGAAGGCACTGACAAAGACCCCACGGTaGCGGTCGTCCAAAGGGAAGGAGAAGTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SRLKKALTKTPR*RSSKGKEKCCF
Trigger: GAAGCAGCACTTCTCCTTCCCTTTGGACGACCGCAACCGTGGGGTCTTTGTCAGTGCCTTCTTCAGCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp ATGTCTCCTAGGACATCACAGCTTTCTGCAGGGGACTaGAAGATGTGGAGGCCCACCAGAAGCAGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: MSPRTSQLSAGD*KMWRPTRSSRC
Trigger: GCACCTGCTGCTTCTGGTGGGCCTCCACATCTTCAAGTCCCCTGCAGAAAGCTGTGATGTCCTAGGAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp AGCCCAGTGATTAGGCGCTTCAGGGCATATTTCATCTCCGAATCATaGGGCCTTGTGCGCAAGTACTCCAACAACTTCTCCGTGGCCCGG +
Preference number: 6 (lower is better)
Translates to: SPVIRRFRAYFISES*GLVRKYSNNFSVAR
Trigger: CCGGGCCACGGAGAAGTTGTTGGAGTACTTGCGCACAAGGCCCAATGATTCGGAGATGAAATATGCCCTGAAGCGCCTAATCACTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp AATACAGCTCGCTCAGGCACATTCAACGAGGCGTCCTaGGCTCTCTTCTGGTTGGCAGTGCTGAAGTCAACC +
Preference number: 6 (lower is better)
Translates to: NTARSGTFNEAS*ALFWLAVLKST
Trigger: GGTTGACTTCAGCACTGCCAACCAGAAGAGAGCTCAGGACGCCTCGTTGAATGTGCCTGAGCGAGCTGTATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp AGCTGCAGACAACGTGGAGTAAGGTGGGGACAGATATaGCCAAATACACTCCGGACCACCTGGCGCATCAAG +
Preference number: 6 (lower is better)
Translates to: SCRQRGVRWGQI*PNTLRTTWRIK
Trigger: CTTGATGCGCCAGGTGGTCCGGAGTGTATTTGGTCATATCTGTCCCCACCTTACTCCACGTTGTCTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp CTGCCAGTAGAGATCATAGAGGCGATTGGAGCCAGATaGGTGATTCCCCTGCTGCAGGCTTTGCTGCAGCTT +
Preference number: 6 (lower is better)
Translates to: LPVEIIEAIGAR*VIPLLQALLQL
Trigger: AAGCTGCAGCAAAGCCTGCAGCAGGGGAATCACTCATCTGGCTCCAATCGCCTCTATGATCTCTACTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp AGGTCTGGTGTCTGCCTGAACTTCACACTGAGCGTCTaGAGTAGGCTGAAGAAGGCACTGACAAAGACCCCA +
Preference number: 6 (lower is better)
Translates to: RSGVCLNFTLSV*SRLKKALTKTP
Trigger: TGGGGTCTTTGTCAGTGCCTTCTTCAGCCTACTGCAGACGCTCAGTGTGAAGTTCAGGCAGACACCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp CCACTCAGGATCCTCAAAACAGACTCTCAGCTCTCGTaGAGACAGAGTCTTCTGGAGCATCAGGCATGCCTG +
Preference number: 6 (lower is better)
Translates to: PLRILKTDSQLS*RQSLLEHQACL
Trigger: CAGGCATGCCTGATGCTCCAGAAGACTCTGTCTGCACGAGAGCTGAGAGTCTGTTTTGAGGATCCTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp CCACCAGAGCCTTTATTGGCTGTCCCTGTAAGTGGTTaGGGTGTTGGGACAGGATCTTCAGCAATTGCACGG +
Preference number: 6 (lower is better)
Translates to: PPEPLLAVPVSG*GVGTGSSAIAR
Trigger: CCGTGCAATTGCTGAAGATCCTGTCCCAACACCCCAACCACTTACAGGGACAGCCAATAAAGGCTCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp GCGGAGGATCACTTTCATGTTACCCTTGAGGACCTTTaGCAGGATCTCCTGGAACATGGACTCTGGGACCTC +
Preference number: 6 (lower is better)
Translates to: AEDHFHVTLEDL*QDLLEHGLWDL
Trigger: GAGGTCCCAGAGTCCATGTTCCAGGAGATCCTGCCAAAGGTCCTCAAGGGTAACATGAAAGTGATCCTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp GCCACCATCATAGTCAACTGCCGCTTAGGGTCATCCTaGCACCCCTCTAGGAAGGTACCCACGTATGTACTT +
Preference number: 6 (lower is better)
Translates to: ATIIVNCRLGSS*HPSRKVPTYVL
Trigger: AAGTACATACGTGGGTACCTTCCTAGAGGGGTGCCAGGATGACCCTAAGCGGCAGTTGACTATGATGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp CGGGTCACAAAGTCCAAGTCTAAGCAGTTAGCAGCCTaGTCCTCTGAGTCCTCTGTGTCAGCTCCGTGTAAC +
Preference number: 6 (lower is better)
Translates to: RVTKSKSKQLAA*SSESSVSAPCN
Trigger: GTTACACGGAGCTGACACAGAGGACTCAGAGGACCAGGCTGCTAACTGCTTAGACTTGGACTTTGTGACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp AGAGTCTGCAGGGTCTGGGTGGCCTTTCCCAAGAGTTaGGTAATCAGCTGCTCCCACTCAGGATCCTCAAAA +
Preference number: 6 (lower is better)
Translates to: RVCRVWVAFPKS*VISCSHSGSSK
Trigger: TTTTGAGGATCCTGAGTGGGAGCAGCTGATTACCCAACTCTTGGGAAAGGCCACCCAGACCCTGCAGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp TCCTCATGGCCTGCCAGTAGAGATCATAGAGGCGATTaGAGCCAGATGAGTGATTCCCCTGCTGCAGGCTTT +
Preference number: 6 (lower is better)
Translates to: SSWPASRDHRGD*SQMSDSPAAGF
Trigger: AAAGCCTGCAGCAGGGGAATCACTCATCTGGCTCCAATCGCCTCTATGATCTCTACTGGCAGGCCATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp AGCTGCTTCTCATCAGCGTCATCAGTGACCACCACGTaGTCATCCTCATCCTCGTTTGTCACAGGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: SCFSSASSVTTT*SSSSSFVTGLS
Trigger: GCTCAGCCCTGTGACAAACGAGGATGAGGATGACAACGTGGTGGTCACTGATGACGCTGATGAGAAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp TGGAAGTCCCGTCGGAGCTTCTTCTCCTTCTGTAGCTaGTTTTTCTCCTCATTCCGGGCCTGGATGCGCATC +
Preference number: 6 (lower is better)
Translates to: WKSRRSFFSFCS*FFSSFRAWMRI
Trigger: GATGCGCATCCAGGCCCGGAATGAGGAGAAAAACAAGCTACAGAAGGAGAAGAAGCTCCGACGGGACTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp AGCTCCAAGTACTTGGGAGAGCGGAGGATCACTTTCATGTTACCCTaGAGGACCTTTGGCAGGATCTCCTGGAACATGGACTCTGGGACC +
Preference number: 6 (lower is better)
Translates to: SSKYLGERRITFMLP*RTFGRISWNMDSGT
Trigger: GGTCCCAGAGTCCATGTTCCAGGAGATCCTGCCAAAGGTCCTCAAGGGTAACATGAAAGTGATCCTCCGCTCTCCCAAGTACTTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp ACAGAGTTGGCGGCCACCTTCAGGATGTTCACCAGACTGGGAATATaGTCTTCTGAGAACAGGTCAACCGAGCCCATGAGTGACTCGAGC +
Preference number: 6 (lower is better)
Translates to: TELAATFRMFTRLGI*SSENRSTEPMSDSS
Trigger: GCTCGAGTCACTCATGGGCTCGGTTGACCTGTTCTCAGAAGACAATATTCCCAGTCTGGTGAACATCCTGAAGGTGGCCGCCAACTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp GCCCTGATTTGGAAGTCCCGTCGGAGCTTCTTCTCCTTCTGTAGCTaGTTTTTCTCCTCATTCCGGGCCTGGATGCGCATCTTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: ALIWKSRRSFFSFCS*FFSSFRAWMRIFCS
Trigger: AGAGCAGAAGATGCGCATCCAGGCCCGGAATGAGGAGAAAAACAAGCTACAGAAGGAGAAGAAGCTCCGACGGGACTTCCAAATCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp TGCTCAACCACAGCTTCATCCTTCTCCAGATGCAAATaGTCCACAAGGCTGACCAGGCGGTGGATGATCCAC +
Preference number: 6 (lower is better)
Translates to: CSTTASSFSRCK*STRLTRRWMIH
Trigger: GTGGATCATCCACCGCCTGGTCAGCCTTGTGGATCATTTGCATCTGGAGAAGGATGAAGCTGTGGTTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp CTCCATGCTGCAGCTGCTTCTCATCAGCGTCATCAGTaGCCACCACGTTGTCATCCTCATCCTCGTTTGTCA +
Preference number: 6 (lower is better)
Translates to: LHAAAASHQRHQ*PPRCHPHPRLS
Trigger: TGACAAACGAGGATGAGGATGACAACGTGGTGGTCACTGATGACGCTGATGAGAAGCAGCTGCAGCATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp TTGGTGATGGTTGTAAAGGCCACCATCATAGTCAACTaGCGCTTAGGGTCATCCTGGCACCCCTCTAGGAAG +
Preference number: 6 (lower is better)
Translates to: LVMVVKATIIVN*RLGSSWHPSRK
Trigger: CTTCCTAGAGGGGTGCCAGGATGACCCTAAGCGGCAGTTGACTATGATGGTGGCCTTTACAACCATCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp TTTTTCTCCTCATTCCGGGCCTGGATGCGCATCTTCTaGTCTTTAAATAGGCTGGCCAGGTTCTGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: FFSSFRAWMRIF*SLNRLARFWSR
Trigger: CCTGGACCAGAACCTGGCCAGCCTATTTAAAGAGCAGAAGATGCGCATCCAGGCCCGGAATGAGGAGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp TTCATGTTACCCTTGAGGACCTTTGGCAGGATCTCCTaGAACATGGACTCTGGGACCTCAGAGAGGATGTCC +
Preference number: 6 (lower is better)
Translates to: FMLPLRTFGRIS*NMDSGTSERMS
Trigger: GGACATCCTCTCTGAGGTCCCAGAGTCCATGTTCCAGGAGATCCTGCCAAAGGTCCTCAAGGGTAACATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp CAGAGTTGGCGGCCACCTTCAGGATGTTCACCAGACTaGGAATATTGTCTTCTGAGAACAGGTCAACCGAGC +
Preference number: 6 (lower is better)
Translates to: QSWRPPSGCSPD*EYCLLRTGQPS
Trigger: GCTCGGTTGACCTGTTCTCAGAAGACAATATTCCCAGTCTGGTGAACATCCTGAAGGTGGCCGCCAACTCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp AAAGGGAAGGAGAAGTGCTGCTTCGTCTCTGGGATCTaGGGCGTAGCCTTCTTCGTCTTAAAGAAGGCATGG +
Preference number: 6 (lower is better)
Translates to: KGKEKCCFVSGI*GVAFFVLKKAW
Trigger: CCATGCCTTCTTTAAGACGAAGAAGGCTACGCCCCAGATCCCAGAGACGAAGCAGCACTTCTCCTTCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp GCTTCAGGGCATATTTCATCTCCGAATCATTGGGCCTaGTGCGCAAGTACTCCAACAACTTCTCCGTGGCCC +
Preference number: 6 (lower is better)
Translates to: ASGHISSPNHWA*CASTPTTSPWP
Trigger: GGGCCACGGAGAAGTTGTTGGAGTACTTGCGCACAAGGCCCAATGATTCGGAGATGAAATATGCCCTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp TCCACCAGAGCCTTTATTGGCTGTCCCTGTAAGTGGTaGGGGTGTTGGGACAGGATCTTCAGCAATTGCACG +
Preference number: 6 (lower is better)
Translates to: STRAFIGCPCKW*GCWDRIFSNCT
Trigger: CGTGCAATTGCTGAAGATCCTGTCCCAACACCCCAACCACTTACAGGGACAGCCAATAAAGGCTCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp ACCCTCTGCTTAGCCAGGAGGAAGAGCTCCAAGTACTaGGGAGAGCGGAGGATCACTTTCATGTTACCCTTG +
Preference number: 6 (lower is better)
Translates to: TLCLARRKSSKY*GERRITFMLPL
Trigger: CAAGGGTAACATGAAAGTGATCCTCCGCTCTCCCAAGTACTTGGAGCTCTTCCTCCTGGCTAAGCAGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp GCGGCCACCTTCAGGATGTTCACCAGACTGGGAATATaGTCTTCTGAGAACAGGTCAACCGAGCCCATGAGT +
Preference number: 6 (lower is better)
Translates to: AATFRMFTRLGI*SSENRSTEPMS
Trigger: ACTCATGGGCTCGGTTGACCTGTTCTCAGAAGACAATATTCCCAGTCTGGTGAACATCCTGAAGGTGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp TTTGTCGGCACCCTCTGCTTAGCCAGGAGGAAGAGCTCCAAGTACTaGGGAGAGCGGAGGATCACTTTCATGTTACCCTTGAGGACCTTT +
Preference number: 6 (lower is better)
Translates to: FVGTLCLARRKSSKY*GERRITFMLPLRTF
Trigger: AAAGGTCCTCAAGGGTAACATGAAAGTGATCCTCCGCTCTCCCAAGTACTTGGAGCTCTTCCTCCTGGCTAAGCAGAGGGTGCCGACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp GAGAAGAGGCTGAGGAACATGGGGACCGTAAGTGAGCTGTTACGCTaGGTCAGAAGAGATTCCAGTGATGCTGAATACACCCGGGTCACA +
Preference number: 6 (lower is better)
Translates to: EKRLRNMGTVSELLR*VRRDSSDAEYTRVT
Trigger: TGTGACCCGGGTGTATTCAGCATCACTGGAATCTCTTCTGACCAAGCGTAACAGCTCACTTACGGTCCCCATGTTCCTCAGCCTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp ATCAGGGCCTCTTTGTCCTTCACTAGGCGGCCTGACTaGAAGAGGGCTAGCACTCCAAAAAGGTTTGCAAAG +
Preference number: 6 (lower is better)
Translates to: IRASLSFTRRPD*KRASTPKRFAK
Trigger: CTTTGCAAACCTTTTTGGAGTGCTAGCCCTCTTTCAGTCAGGCCGCCTAGTGAAGGACAAAGAGGCCCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp ACTTGGGAGAGCGGAGGATCACTTTCATGTTACCCTTaGGGACCTTTGGCAGGATCTCCTGGAACATGGACT +
Preference number: 6 (lower is better)
Translates to: TWESGGSLSCYP*GPLAGSPGTWT
Trigger: AGTCCATGTTCCAGGAGATCCTGCCAAAGGTCCTCAAGGGTAACATGAAAGTGATCCTCCGCTCTCCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp AGCGTGATCGGCGGGGATTCTGCTCCATGCTTTTCTTaGTGCAAGTCTGAATGTCTCCTAGGACATCACAGC +
Preference number: 6 (lower is better)
Translates to: SVIGGDSAPCFS*CKSECLLGHHS
Trigger: GCTGTGATGTCCTAGGAGACATTCAGACTTGCATCAAGAAAAGCATGGAGCAGAATCCCCGCCGATCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp AAGTGGTTGGGGTGTTGGGACAGGATCTTCAGCAATTaGACGGACTTCATCAGGGCCTCTTTGTCCTTCACT +
Preference number: 6 (lower is better)
Translates to: KWLGCWDRIFSN*TDFIRASLSFT
Trigger: AGTGAAGGACAAAGAGGCCCTGATGAAGTCCGTGCAATTGCTGAAGATCCTGTCCCAACACCCCAACCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp GCCTTTATTGGCTGTCCCTGTAAGTGGTTGGGGTGTTaGGACAGGATCTTCAGCAATTGCACGGACTTCATC +
Preference number: 6 (lower is better)
Translates to: AFIGCPCKWLGC*DRIFSNCTDFI
Trigger: GATGAAGTCCGTGCAATTGCTGAAGATCCTGTCCCAACACCCCAACCACTTACAGGGACAGCCAATAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp ATGTCCACCAGAGCCTTTATTGGCTGTCCCTGTAAGTaGTTGGGGTGTTGGGACAGGATCTTCAGCAATTGC +
Preference number: 6 (lower is better)
Translates to: MSTRAFIGCPCK*LGCWDRIFSNC
Trigger: GCAATTGCTGAAGATCCTGTCCCAACACCCCAACCACTTACAGGGACAGCCAATAAAGGCTCTGGTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp TTTCTGACTTTGGACGTTGGACTCCTAGCATCCTCATaGCCTGCCAGTAGAGATCATAGAGGCGATTGGAGC +
Preference number: 6 (lower is better)
Translates to: FLTLDVGLLASS*PASRDHRGDWS
Trigger: GCTCCAATCGCCTCTATGATCTCTACTGGCAGGCCATGAGGATGCTAGGAGTCCAACGTCCAAAGTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp TACTTGGGAGAGCGGAGGATCACTTTCATGTTACCCTaGAGGACCTTTGGCAGGATCTCCTGGAACATGGAC +
Preference number: 6 (lower is better)
Translates to: YLGERRITFMLP*RTFGRISWNMD
Trigger: GTCCATGTTCCAGGAGATCCTGCCAAAGGTCCTCAAGGGTAACATGAAAGTGATCCTCCGCTCTCCCAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp CGTGACACGCCAGAAGGTAGGCATGACAGGGAGACCTaGATTGGTGATGGTTGTAAAGGCCACCATCATAGT +
Preference number: 6 (lower is better)
Translates to: RDTPEGRHDRET*IGDGCKGHHHS
Trigger: ACTATGATGGTGGCCTTTACAACCATCACCAATCAAGGTCTCCCTGTCATGCCTACCTTCTGGCGTGTCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp CCTTCAGAGTACTCATCATCTGGTCCCAGGCCTGACGCTGCTGTGTaGTCAAGGATGTCACACTGGTTACATTGCGGTTATGGTTCAACA +
Preference number: 6 (lower is better)
Translates to: PSEYSSSGPRPDAAV*SRMSHWLHCGYGST
Trigger: TGTTGAACCATAACCGCAATGTAACCAGTGTGACATCCTTGACAACACAGCAGCGTCAGGCCTGGGACCAGATGATGAGTACTCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp TTCCGCTTTGTGCTGACGGGGCTCTGGGTGTCACTAGGAATATCCTaGGCATTCTTCTTTTCTGACTTTGGACGTTGGACTCCTAGCATC +
Preference number: 6 (lower is better)
Translates to: FRFVLTGLWVSLGIS*AFFFSDFGRWTPSI
Trigger: GATGCTAGGAGTCCAACGTCCAAAGTCAGAAAAGAAGAATGCCAAGGATATTCCTAGTGACACCCAGAGCCCCGTCAGCACAAAGCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp AATTCCTTCAGAGTACTCATCATCTGGTCCCAGGCCTaGCGCTGCTGTGTTGTCAAGGATGTCACACTGGTT +
Preference number: 6 (lower is better)
Translates to: NSFRVLIIWSQA*RCCVVKDVTLV
Trigger: AACCAGTGTGACATCCTTGACAACACAGCAGCGTCAGGCCTGGGACCAGATGATGAGTACTCTGAAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp CGGGGATTCTGCTCCATGCTTTTCTTGATGCAAGTCTaGATGTCTCCTAGGACATCACAGCTTTCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: RGFCSMLFLMQV*MSPRTSQLSAG
Trigger: CCCTGCAGAAAGCTGTGATGTCCTAGGAGACATTCAGACTTGCATCAAGAAAAGCATGGAGCAGAATCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp TCCTCTGAGTCCTCTGTGTCAGCTCCGTGTAACTTATaGCCATCTTGGTGCCTCTTATTGGTGTTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: SSESSVSAPCNL*PSWCLLLVLPL
Trigger: CAAGGGCAACACCAATAAGAGGCACCAAGATGGTCATAAGTTACACGGAGCTGACACAGAGGACTCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp TTAGGCGCTTCAGGGCATATTTCATCTCCGAATCATTaGGCCTTGTGCGCAAGTACTCCAACAACTTCTCCG +
Preference number: 6 (lower is better)
Translates to: LGASGHISSPNH*ALCASTPTTSP
Trigger: CGGAGAAGTTGTTGGAGTACTTGCGCACAAGGCCCAATGATTCGGAGATGAAATATGCCCTGAAGCGCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp TCCTTCTGTAGCTTGTTTTTCTCCTCATTCCGGGCCTaGATGCGCATCTTCTGCTCTTTAAATAGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: SFCSLFFSSFRA*MRIFCSLNRLA
Trigger: GGCCAGCCTATTTAAAGAGCAGAAGATGCGCATCCAGGCCCGGAATGAGGAGAAAAACAAGCTACAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp CTGAGGAACATGGGGACCGTAAGTGAGCTGTTACGCTaGGTCAGAAGAGATTCCAGTGATGCTGAATACACC +
Preference number: 6 (lower is better)
Translates to: LRNMGTVSELLR*VRRDSSDAEYT
Trigger: GGTGTATTCAGCATCACTGGAATCTCTTCTGACCAAGCGTAACAGCTCACTTACGGTCCCCATGTTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp GTGCTGACGGGGCTCTGGGTGTCACTAGGAATATCCTaGGCATTCTTCTTTTCTGACTTTGGACGTTGGACT +
Preference number: 6 (lower is better)
Translates to: VLTGLWVSLGIS*AFFFSDFGRWT
Trigger: AGTCCAACGTCCAAAGTCAGAAAAGAAGAATGCCAAGGATATTCCTAGTGACACCCAGAGCCCCGTCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS TCA 72 bp AATGCATTCCCAGCTTTTAACACTTCCATCAACTGTTaGCGGAAGCCTGGGTCCACATCTTTGTCACGGTCC +
Preference number: 6 (lower is better)
Translates to: NAFPAFNTSINC*RKPGSTSLSRS
Trigger: GGACCGTGACAAAGATGTGGACCCAGGCTTCCGTCAACAGTTGATGGAAGTGTTAAAAGCTGGGAATGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp ATTAGGCGCTTCAGGGCATATTTCATCTCCGAATCATaGGGCCTTGTGCGCAAGTACTCCAACAACTTCTCC +
Preference number: 6 (lower is better)
Translates to: IRRFRAYFISES*GLVRKYSNNFS
Trigger: GGAGAAGTTGTTGGAGTACTTGCGCACAAGGCCCAATGATTCGGAGATGAAATATGCCCTGAAGCGCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp GCTGCTGTGTTGTCAAGGATGTCACACTGGTTACATTaGGGTTATGGTTCAACAGCATGTCTGCCAACTGAA +
Preference number: 6 (lower is better)
Translates to: AAVLSRMSHWLH*GYGSTACLPTE
Trigger: TTCAGTTGGCAGACATGCTGTTGAACCATAACCGCAATGTAACCAGTGTGACATCCTTGACAACACAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp AATCCCTTTTTCTTCCGCTTTGTGCTGACGGGGCTCTaGGTGTCACTAGGAATATCCTTGGCATTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: NPFFFRFVLTGL*VSLGISLAFFF
Trigger: AAAGAAGAATGCCAAGGATATTCCTAGTGACACCCAGAGCCCCGTCAGCACAAAGCGGAAGAAAAAGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp TTCTTTTCTGGTGTGGTGCCCTCAGATTTAAGTTTCTTTCGCTTCTaGGTCTCTGGCAAGAATCCCTTTTTCTTCCGCTTTGTGCTGACG +
Preference number: 6 (lower is better)
Translates to: FFSGVVPSDLSFFRF*VSGKNPFFFRFVLT
Trigger: CGTCAGCACAAAGCGGAAGAAAAAGGGATTCTTGCCAGAGACCAAGAAGCGAAAGAAACTTAAATCTGAGGGCACCACACCAGAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 72 bp GGTGTGGTGCCCTCAGATTTAAGTTTCTTTCGCTTCTaGGTCTCTGGCAAGAATCCCTTTTTCTTCCGCTTT +
Preference number: 6 (lower is better)
Translates to: GVVPSDLSFFRF*VSGKNPFFFRF
Trigger: AAAGCGGAAGAAAAAGGGATTCTTGCCAGAGACCAAGAAGCGAAAGAAACTTAAATCTGAGGGCACCACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CAA 90 bp CTTCTTCGTCTTAAAGAAGGCATGGAACAAGCAAAACCTGGCTATTaGCTCAACCACAGCTTCATCCTTCTCCAGATGCAAATGATCCAC +
Preference number: 6 (lower is better)
Translates to: LLRLKEGMEQAKPGY*LNHSFILLQMQMIH
Trigger: GTGGATCATTTGCATCTGGAGAAGGATGAAGCTGTGGTTGAGCAAATAGCCAGGTTTTGCTTGTTCCATGCCTTCTTTAAGACGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS GCA 72 bp TTAAAGAAGGCATGGAACAAGCAAAACCTGGCTATTTaGTCAACCACAGCTTCATCCTTCTCCAGATGCAAA +
Preference number: 6 (lower is better)
Translates to: LKKAWNKQNLAI*STTASSFSRCK
Trigger: TTTGCATCTGGAGAAGGATGAAGCTGTGGTTGAGCAAATAGCCAGGTTTTGCTTGTTCCATGCCTTCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6
CDS CCA 72 bp GTATTTTTCTTGTATCTGATCCAGGATGTCACACAATaGGATGTCTTCAAAAGACTGCAACAGCTGTGCCAG +
Preference number: 6 (lower is better)
Translates to: VFFLYLIQDVTQ*DVFKRLQQLCQ
Trigger: CTGGCACAGCTGTTGCAGTCTTTTGAAGACATCCCATTGTGTGACATCCTGGATCAGATACAAGAAAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045633.6