Pregenerated sensors for MYB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019982Ensembl transcript IDs: ENSMUST00000020158.9, ENSMUST00000188495.8
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTGTTaGCTTCCATATTTGTCTTCCCTGAAGCCCAGGAACCACGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: KASILANALKAETGC*LPYLSSLKPRNHEA Trigger: TGCCTCGTGGTTCCTGGGCTTCAGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| 3UTR CAA 90 bp | CAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTGTaGACTTCCATATTTGTCTTCCCTGAAGCCCAGGAACCACGAGGC | + |
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Preference number: 2 (lower is better) Translates to: QGQHSCKCSQGRNWL*TSIFVFPEAQEPRG Trigger: GCCTCGTGGTTCCTGGGCTTCAGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| 3UTR-3UTR GCA 90 bp | AAATCTCTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCAAATGCACTTGGTGCTaGTCTCAACTGTTGTACCAC | + |
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Preference number: 2 (lower is better) Translates to: KSLCVCLVTEIHGILGYFKCTWC*SQLLYH Trigger: GTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTT...GAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAGAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| 3UTR TCA 72 bp | ATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTaGGGAGCCATGTGTCGAAAGTCAACTTTTAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: IRLFSQPWSAPR*GAMCRKSTFKC Trigger: ACACTTAAAAGTTGACTTTCGACACATGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| 3UTR TCA 72 bp | ATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTGTTaGCTTCCATATTTGTCTTCCCTGAAGCCCAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: ILANALKAETGC*LPYLSSLKPRN Trigger: GTTCCTGGGCTTCAGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTGTTCAACTAAAAATGCACTaGGTGCTGCTCTCAACTGTT | + |
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Preference number: 3 (lower is better) Translates to: QNSRPAFLQMLSRQKLAVQLKMH*VLLSTV Trigger: AACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG...AACAGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| 3UTR GCA 72 bp | ATACACTGTCATTTCAGAATTCAAGGCCAGCATTCTTaGAAATGCTCTCAAGGCAGAAACTGGCTGTTGACT | + |
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Preference number: 3 (lower is better) Translates to: IHCHFRIQGQHS*KCSQGRNWLLT Trigger: AGTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTGAAATGACAGTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| 3UTR-3UTR CAA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGCAACTAAAAATGCACTaGGTGCTGCTCTCAACTGTT | + |
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Preference number: 3 (lower is better) Translates to: KIFPRLLATNELLEGCIKQLKMH*VLLSTV Trigger: AACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCAGTGTCTCTGGATGGCTaGCGCAGCCGGCTGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: TTKSGSSLSHGALHAEEPVSLDG*RSRLRD Trigger: GTCCCTCAGCCGGCTGCGGCAGCCATCCAGAGACAC...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCAGCGTCTGGCTGGCTTTaGAAGGCTCCTGCAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TTKSGSSLSHGALHAEEPASGWL*KAPAGS Trigger: GCTACCTGCAGGAGCCTTCCAAAGCCAGCCAGACGC...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCAGGTGCACTATCCCCATaGGGTCTGGTCTGGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: TTKSGSSLSHGALHAEEPGALSP*GLVWST Trigger: TGTGGACCAGACCAGACCTCATGGGGATAGTGCACC...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCATCCGGGCAGCAGCTTTaGGATCTCTGCCCATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TTKSGSSLSHGALHAEEPSGQQL*DLCPSV Trigger: AACAGATGGGCAGAGATCGCAAAGCTGCTGCCCGGA...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCACTGCAAGGGCATGTTTaGATGGTGTGGGAGTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: TTKSGSSLSHGALHAEEPLQGHV*MVWEFE Trigger: CTCGAACTCCCACACCATTCAAACATGCCCTTGCAG...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCACATTGTCCAGAATGGTaGCCTGGTGGACGATCATGC | + |
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Preference number: 4 (lower is better) Translates to: TTKSGSSLSHGALHAEEPHCPEW*PGGRSC Trigger: GCATGATCGTCCACCAGGGCACCATTCTGGACAATG...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCAAGAATGGTGCCCTGGTaGACGATCATGCACCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: TTKSGSSLSHGALHAEEPRMVPW*TIMHLA Trigger: AGCAAGGTGCATGATCGTCCACCAGGGCACCATTCT...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | CAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTGTTGCTCCCAGGCACCACTaGATGGCTGCAAGGGACCCA | + |
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Preference number: 4 (lower is better) Translates to: QNSRPAFLQMLSRQKLAVAPRHH*MAARDP Trigger: TGGGTCCCTTGCAGCCATGCAGTGGTGCCTGGGAGC...AACAGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | TGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAGCCATGGCTTCCCACAGGATGCTaGCTCCCAGGCACCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: CCSQLLYHNKIRLFSQPWLPTGC*LPGTTA Trigger: TGCAGTGGTGCCTGGGAGCCAGCATCCTGTGGGAAG...CCATGGCTGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | TGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAGCCATGGGGGCTGCTGGCTAGGTaGAAAAGCTGCCGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: CCSQLLYHNKIRLFSQPWGLLAR*KSCRFF Trigger: GAAGAAGCGGCAGCTTTTTCACCTAGCCAGCAGCCC...CCATGGCTGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCACAAACAGGAAACAGGTaGACTATCCCCATGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TTKSGSSLSHGALHAEEPQTGNR*TIPMRS Trigger: AGACCTCATGGGGATAGTGCACCTGTTTCCTGTTTG...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCAACTTCTGGATTCAAATaGTTGTGCCACCTCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: TTKSGSSLSHGALHAEEPTSGFK*LCHLSR Trigger: TCGGGAGAGGTGGCACAACCATTTGAATCCAGAAGT...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | CACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAGAAGCTCGTGGCCACTaGCGTCTGGCTGGCTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: HLVLLSTVVPQQNQALLSEARGH*RLAGFG Trigger: TCCAAAGCCAGCCAGACGCCAGTGGCCACGAGCTTC...TGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | CACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCATCTTCTGGAAGCTCGTaGCCACTGGCGTCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HLVLLSTVVPQQNQALLSSSGSS*PLASGW Trigger: CCAGCCAGACGCCAGTGGCCACGAGCTTCCAGAAGA...TGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | CACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCACCGGAGGCCGTCATCTaGTCCTCTGTCTTCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: HLVLLSTVVPQQNQALLSPEAVI*SSVFPQ Trigger: CTGTGGGAAGACAGAGGACCAGATGACGGCCTCCGG...TGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCAGCAGATAATTGGCAATaGCTTTCCAGTCGTCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: TTKSGSSLSHGALHAEEPADNWQ*LSSRLF Trigger: GAACAGACGACTGGAAAGTCATTGCCAATTATCTGC...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCAAGAGCTTTCGAGGATTaGCCTTTTGATAGCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TTKSGSSLSHGALHAEEPRAFED*PFDSWS Trigger: ACTCCAGCTATCAAAAGGTCAATCCTCGAAAGCTCT...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | AATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTGCGTCTGGCTGGCTTTaGAAGGCTCCTGCAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: NALGAALNCCTTTKSGSSASGWL*KAPAGS Trigger: GCTACCTGCAGGAGCCTTCCAAAGCCAGCCAGACGC...AGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | ATTTCAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCGAAGCTCGTGGCCACTaGCGTCTGGCTGGCTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: ISEFKASILANALKAETGEARGH*RLAGFG Trigger: TCCAAAGCCAGCCAGACGCCAGTGGCCACGAGCTTC...GCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | CACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAGGAGGACTGGCCACTTaGAGAGAGCTGAGATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HLVLLSTVVPQQNQALLSGGLAT*RELRWR Trigger: CCTCCATCTCAGCTCTCTCCAAGTGGCCAGTCCTCC...TGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | TGCAAATGCTCTCAAGGCAGAAACTGGCTGTTGACTTCCATATTTGTCTTCCCTGGTGCACTATCCCCATaGGGTCTGGTCTGGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: CKCSQGRNWLLTSIFVFPGALSP*GLVWST Trigger: TGTGGACCAGACCAGACCTCATGGGGATAGTGCACC...AGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | TGCAAATGCTCTCAAGGCAGAAACTGGCTGTTGACTTCCATATTTGTCTTCCCTCCTGGTGGACGATCATaGACCTTGCTGGTGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: CKCSQGRNWLLTSIFVFPPGGRS*TLLVRH Trigger: GTGCCTCACCAGCAAGGTGCATGATCGTCCACCAGG...AGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | CAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCCCAGGCACCACTaGATGGCTGCAAGGGACCCA | + |
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Preference number: 4 (lower is better) Translates to: QLKMHLVLLSTVVPQQNQAPRHH*MAARDP Trigger: TGGGTCCCTTGCAGCCATGCAGTGGTGCCTGGGAGC...CTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | AATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTTTCTGCCACCGGTGTTaGCACTGCACATCTGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: NALGAALNCCTTTKSGSSFCHRC*HCTSVR Trigger: CCGGACAGATGTGCAGTGCCAACACCGGTGGCAGAA...AGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | CTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAATGGTCTGGTCCACAATaGAGGTGCTGTGCCACCCGG | + |
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Preference number: 4 (lower is better) Translates to: LKQLKMHLVLLSTVVPQQWSGPQ*RCCATR Trigger: CCGGGTGGCACAGCACCTCCATTGTGGACCAGACCA...TTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | TCTCAAGGCAGAAACTGGCTGTTGACTTCCATATTTGTCTTCCCTGAAGCCCAGTATCCCCATGAGGTCTaGTCTGGTCCACAATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SQGRNWLLTSIFVFPEAQYPHEV*SGPQWR Trigger: CCTCCATTGTGGACCAGACCAGACCTCATGGGGATA...CTGGGCTTCAGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | CTCTGTACACTTAGAAACCTACAGAGAATGTTCTTCCAAGTCAGAAAAACGCCCCTTCCCACAGGATGCTaGCTCCCAGGCACCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: LCTLRNLQRMFFQVRKTPLPTGC*LPGTTA Trigger: TGCAGTGGTGCCTGGGAGCCAGCATCCTGTGGGAAG...GGGCGTTTTTCTGACTTGGAAGAACATTCTCTGTAGGTTTCTAAGTGTACAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | CAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGTTGCTGTGCCTCGCTTaGGGTGAGTCTGGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: QLKMHLVLLSTVVPQQNQLLCLA*GESGPR Trigger: CCTCGGCCCAGACTCACCCCAAGCGAGGCACAGCAA...CTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | TGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAGCCATGGCTAGTTTTCCCCAAGTaGCGCTTTCCAGATTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: CCSQLLYHNKIRLFSQPWLVFPK*RFPDLG Trigger: GCCCAAATCTGGAAAGCGTCACTTGGGGAAAACTAG...CCATGGCTGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | CTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAGCTGCCGCAGCCGGCTaGGGGACGTTGACTATATTA | + |
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Preference number: 4 (lower is better) Translates to: LKQLKMHLVLLSTVVPQQAAAAG*GTLTIL Trigger: TAATATAGTCAACGTCCCTCAGCCGGCTGCGGCAGC...TTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | TGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAGCCATGGGGTGGTCCACTCTCTTaGAACTCAGCCACAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: CCSQLLYHNKIRLFSQPWGGPLS*NSATIP Trigger: TGGAATTGTGGCTGAGTTTCAAGAGAGTGGACCACC...CCATGGCTGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | TTTCAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTTCCGGGCAGCAGCTTTaGGATCTCTGCCCATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: FQNSRPAFLQMLSRQKLASGQQL*DLCPSV Trigger: AACAGATGGGCAGAGATCGCAAAGCTGCTGCCCGGA...AGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | CTACAAGGCAGTAGATACACTGTCATTTCAGAATTCAAGGCCAGCATTCTTGCAGCCACCCGGGGTAGCTaGAAGTGTGGTTCTGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LQGSRYTVISEFKASILAATRGS*KCGSVL Trigger: CAACACAGAACCACACTTGCAGCTACCCCGGGTGGC...TGCAAGAATGCTGGCCTTGAATTCTGAAATGACAGTGTATCTACTGCCTTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | CACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAGACGCTTTCCAGATTTaGGCAGCAGCCCATCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: HLVLLSTVVPQQNQALLSDAFQI*AAAHRS Trigger: ACTACGATGGGCTGCTGCCCAAATCTGGAAAGCGTC...TGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | TTATTTTGCTACAAGGCAGTAGATACACTGTCATTTCAGAATTCAAGGCCAGCAGTGGCCACTGGCGTCTaGCTGGCTTTGGAAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LFCYKAVDTLSFQNSRPAVATGV*LALEGS Trigger: GGAGCCTTCCAAAGCCAGCCAGACGCCAGTGGCCAC...TGCTGGCCTTGAATTCTGAAATGACAGTGTATCTACTGCCTTGTAGCAAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | TCTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAGGAGGACTGGCCACTTaGAGAGAGCTGAGATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SQATKNALGAALNCCTTTGGLAT*RELRWR Trigger: CCTCCATCTCAGCTCTCTCCAAGTGGCCAGTCCTCC...TGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | AATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTATCTGCAGGCAGAGATaGGGTGGCATGGTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NALGAALNCCTTTKSGSSICRQR*GGMVFS Trigger: GGAGAACACCATGCCACCCCATCTCTGCCTGCAGAT...AGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | CAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGCCGGAGGCCGTCATCTaGTCCTCTGTCTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QLKMHLVLLSTVVPQQNQPEAVI*SSVFPQ Trigger: CTGTGGGAAGACAGAGGACCAGATGACGGCCTCCGG...CTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAGCCATGGTGTGTGCCTGGTAAATaGTTCTGTCCTCCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCSQLLYHNKIRLFSQPWCVPGK*FCPPLL Trigger: CAGAAGAGGAGGACAGAATCATTTACCAGGCACACA...CCATGGCTGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | AATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTGTTGACCATGGTGTCAGTTTGTaGCCAATGAGAGGAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSRPAFLQMLSRQKLAVDHGVSL*PMRGVE Trigger: CTCCACTCCTCTCATTGGTCACAAACTGACACCATG...GTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | CTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAACAGCTTTGCGATCTCTaGCCATCTGTTCCCCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LKQLKMHLVLLSTVVPQQQLCDL*PSVPQT Trigger: CGTCTGGGGAACAGATGGGCAGAGATCGCAAAGCTG...TTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | AAATCTCTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCGTGTCTCTGGATGGCTaGCGCAGCCGGCTGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSLCVCLVTEIHGILGYFVSLDG*RSRLRD Trigger: GTCCCTCAGCCGGCTGCGGCAGCCATCCAGAGACAC...GAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAGAGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | AATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCATTGTCCAGAATGGTaGCCTGGTGGACGATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: NALGAALNCCTTTKSGSSHCPEW*PGGRSC Trigger: GCATGATCGTCCACCAGGGCACCATTCTGGACAATG...AGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | AATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTGCTTTGCCTGTGGGCTaGTGGCTAGGTGAAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NALGAALNCCTTTKSGSSALPVG*WLGEKA Trigger: AGCTTTTTCACCTAGCCAGCAGCCCACAGGCAAAGC...AGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCGACGCTTTCCAGATTTaGGCAGCAGCCCATCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISEFKASILANALKAETGDAFQI*AAAHRS Trigger: ACTACGATGGGCTGCTGCCCAAATCTGGAAAGCGTC...GCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | TGCAAATGCTCTCAAGGCAGAAACTGGCTGTTGACTTCCATATTTGTCTTCCCTCCACCTTGCGACGCATaGTGGAATTCCAGTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CKCSQGRNWLLTSIFVFPPPCDA*WNSSGS Trigger: AGAACCACTGGAATTCCACCATGCGTCGCAAGGTGG...AGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGGTGGCCACTGGCGTCTaGCTGGCTTTGGAAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KIFPRLLATNELLEGCIKVATGV*LALEGS Trigger: GGAGCCTTCCAAAGCCAGCCAGACGCCAGTGGCCAC...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGCTACAAGGCAGTAGATACACTGTCATTTCAGAATTCAAGGCCAGCATGGTCTGGTCCACAATaGAGGTGCTGTGCCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFCYKAVDTLSFQNSRPAWSGPQ*RCCATR Trigger: CCGGGTGGCACAGCACCTCCATTGTGGACCAGACCA...TGCTGGCCTTGAATTCTGAAATGACAGTGTATCTACTGCCTTGTAGCAAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | AATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTTCCAGAATGGTGCCCTaGTGGACGATCATGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: NALGAALNCCTTTKSGSSSRMVP*WTIMHL Trigger: AAGGTGCATGATCGTCCACCAGGGCACCATTCTGGA...AGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGGCAGAAACTGGCTGTTGACTTCCATATTTGTCTTCCCTGAAGCCCAGGCAGATAATTGGCAATaGCTTTCCAGTCGTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQGRNWLLTSIFVFPEAQADNWQ*LSSRLF Trigger: GAACAGACGACTGGAAAGTCATTGCCAATTATCTGC...CTGGGCTTCAGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCTCTATGACTCTCTaGTCTTCTTCTTTGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCSQLLYHNKIRLFSQPWSSMTL*SSSLVQ Trigger: CTGGACCAAAGAAGAAGATCAGAGAGTCATAGAGCT...CCATGGCTGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACACAGCTCGTTCTCTGTTaGCATCAGGAGCAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQATKNALGAALNCCTTTQLVLC*HQEQLQ Trigger: CTGGAGTTGCTCCTGATGTCAACAGAGAACGAGCTG...TGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACTGGCTGTTGACTTCCATATTTGTCTTCCCTGAAGCCCAGGAACCACGAAGAGCTTTCGAGGATTaGCCTTTTGATAGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RNWLLTSIFVFPEAQEPRRAFED*PFDSWS Trigger: ACTCCAGCTATCAAAAGGTCAATCCTCGAAAGCTCT...TCGTGGTTCCTGGGCTTCAGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACACTGCAAGGGCATGTTTaGATGGTGTGGGAGTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQATKNALGAALNCCTTTLQGHV*MVWEFE Trigger: CTCGAACTCCCACACCATTCAAACATGCCCTTGCAG...TGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | CAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGCAGCTTTGCGATCTCTaGCCATCTGTTCCCCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: QLKMHLVLLSTVVPQQNQQLCDL*PSVPQT Trigger: CGTCTGGGGAACAGATGGGCAGAGATCGCAAAGCTG...CTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATTGTCTTCCCACAGGATaGTGGCTCCCAGGCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: KQLKMHLVLLSTVVPQQNCLPTG*WLPGTT Trigger: AGTGGTGCCTGGGAGCCAGCATCCTGTGGGAAGACA...ATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTTGCTACAAGGCAGTAGATACACTGTCATTTCAGAATTCAAGGCCAGCACAGGCTAGGCTCTCCTaGAGATCTAGTCCCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFCYKAVDTLSFQNSRPAQARLS*RSSPMA Trigger: GGCCATGGGACTAGATCTGCAGGAGAGCCTAGCCTG...TGCTGGCCTTGAATTCTGAAATGACAGTGTATCTACTGCCTTGTAGCAAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGCTACAAGGCAGTAGATACACTGTCATTTCAGAATTCAAGGCCAGCATTCTGCCACCGGTGTTaGCACTGCACATCTGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFCYKAVDTLSFQNSRPAFCHRC*HCTSVR Trigger: CCGGACAGATGTGCAGTGCCAACACCGGTGGCAGAA...TGCTGGCCTTGAATTCTGAAATGACAGTGTATCTACTGCCTTGTAGCAAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGTCTTCTGGAAGCTCGTaGCCACTGGCGTCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KIFPRLLATNELLEGCIKSSGSS*PLASGW Trigger: CCAGCCAGACGCCAGTGGCCACGAGCTTCCAGAAGA...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | CAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGATCTGCAGGCAGAGATaGGGTGGCATGGTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLKMHLVLLSTVVPQQNQICRQR*GGMVFS Trigger: GGAGAACACCATGCCACCCCATCTCTGCCTGCAGAT...CTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAGAATGGTGCCCTGGTaGACGATCATGCACCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQATKNALGAALNCCTTTRMVPW*TIMHLA Trigger: AGCAAGGTGCATGATCGTCCACCAGGGCACCATTCT...TGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAAAGCCCGAGCTTTCATaGTTGCTGGAAGTGTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLVLLSTVVPQQNQALLSKPELS*LLEVFK Trigger: CTTGAACACTTCCAGCAACCATGAAAGCTCGGGCTT...TGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAACTAGTTTTCCCCAAGTaGCGCTTTCCAGATTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKQLKMHLVLLSTVVPQQLVFPK*RFPDLG Trigger: GCCCAAATCTGGAAAGCGTCACTTGGGGAAAACTAG...TTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGGCTGCCGCAGCCGGCTaGGGGACGTTGACTATATTA | + |
|
Preference number: 4 (lower is better) Translates to: KIFPRLLATNELLEGCIKAAAAG*GTLTIL Trigger: TAATATAGTCAACGTCCCTCAGCCGGCTGCGGCAGC...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAATCAGTTTGTGACCAATaGGAGGAGTGGAGGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKQLKMHLVLLSTVVPQQSVCDQ*EEWRVR Trigger: CCTTACCCTCCACTCCTCTCATTGGTCACAAACTGA...TTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAACATGGTGTCAGTTTGTaGCCAATGAGAGGAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKQLKMHLVLLSTVVPQQHGVSL*PMRGVE Trigger: CTCCACTCCTCTCATTGGTCACAAACTGACACCATG...TTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAGGTGGTCCACTCTCTTaGAACTCAGCCACAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKQLKMHLVLLSTVVPQQGGPLS*NSATIP Trigger: TGGAATTGTGGCTGAGTTTCAAGAGAGTGGACCACC...TTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | CAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGCTCTGCCCAGTGGTTTaGGCAGAAGAAGTTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QLKMHLVLLSTVVPQQNQLCPVV*AEEVSR Trigger: TCGGGAAACTTCTTCTGCTCAAACCACTGGGCAGAG...CTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTTGCTACAAGGCAGTAGATACACTGTCATTTCAGAATTCAAGGCCAGCATGGCCCTCTCTTTGCTaGAGCTGGAAGGCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFCYKAVDTLSFQNSRPAWPSLC*SWKALP Trigger: AGGCAAAGCCTTCCAGCTTCAGCAAAGAGAGGGCCA...TGCTGGCCTTGAATTCTGAAATGACAGTGTATCTACTGCCTTGTAGCAAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCTTTGTGCCTGGTGGACGATCATaGACCTTGCTGGTGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCVCLVTEIHGILGYFFVPGGRS*TLLVRH Trigger: GTGCCTCACCAGCAAGGTGCATGATCGTCCACCAGG...CACAAAGAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCTTTGTGTGTCTTCCCACAGGATaGTGGCTCCCAGGCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: LCVCLVTEIHGILGYFFVCLPTG*WLPGTT Trigger: AGTGGTGCCTGGGAGCCAGCATCCTGTGGGAAGACA...CACAAAGAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTTGGGTTTTCACAGTCTaGTCTCGACATGGTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FQNSRPAFLQMLSRQKLAWVFTV*SRHGVS Trigger: ACTGACACCATGTCGAGACCAGACTGTGAAAACCCA...AGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| 3UTR CAA 72 bp | CATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTGTaGACTTCCATATTTGTCTTCCCTGAAGCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSCKCSQGRNWL*TSIFVFPEAQE Trigger: TTCCTGGGCTTCAGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | AATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCCAAACCCCATCAAATaGTTGTTCTTCTGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NALGAALNCCTTTKSGSSPNPIK*LFFWKL Trigger: GAGCTTCCAGAAGAACAATCATTTGATGGGGTTTGG...AGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTTGCTACAAGGCAGTAGATACACTGTCATTTCAGAATTCAAGGCCAGCACAGCTCGTTCTCTGTTaGCATCAGGAGCAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFCYKAVDTLSFQNSRPAQLVLC*HQEQLQ Trigger: CTGGAGTTGCTCCTGATGTCAACAGAGAACGAGCTG...TGCTGGCCTTGAATTCTGAAATGACAGTGTATCTACTGCCTTGTAGCAAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | GTACACTTAGAAACCTACAGAGAATGTTCTTCCAAGTCAGAAAAACGCCCAAACTCAGTTTGTGACCAATaGGAGGAGTGGAGGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLETYRECSSKSEKRPNSVCDQ*EEWRVR Trigger: CCTTACCCTCCACTCCTCTCATTGGTCACAAACTGA...GTTTGGGCGTTTTTCTGACTTGGAAGAACATTCTCTGTAGGTTTCTAAGTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | CACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAACTGGAGATGTTTTGTaGTTCGGCGATGTGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: HLVLLSTVVPQQNQALLSTGDVL*FGDVVI Trigger: TATTACCACATCGCCGAAGCACAAAACATCTCCAGT...TGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | AAATCTCTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCGCCACCCGGGGTAGCTaGAAGTGTGGTTCTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSLCVCLVTEIHGILGYFATRGS*KCGSVL Trigger: CAACACAGAACCACACTTGCAGCTACCCCGGGTGGC...GAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAGAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCCCGAGCTTTCATGGTTaGTGGAAGTGTTCAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ISEFKASILANALKAETGPSFHG*WKCSRT Trigger: AGTTCTTGAACACTTCCAGCAACCATGAAAGCTCGG...GCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCCACCTTGCGACGCATaGTGGAATTCCAGTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQLKMHLVLLSTVVPQQNPPCDA*WNSSGS Trigger: AGAACCACTGGAATTCCACCATGCGTCGCAAGGTGG...ATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | CAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGAGAGATGGGGTGGCATaGTGTTCTCCCAAACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLKMHLVLLSTVVPQQNQRDGVA*CSPKQE Trigger: TTCCTGTTTGGGAGAACACCATGCCACCCCATCTCT...CTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATTCCAGAATGGTGCCCTaGTGGACGATCATGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQLKMHLVLLSTVVPQQNSRMVP*WTIMHL Trigger: AAGGTGCATGATCGTCCACCAGGGCACCATTCTGGA...ATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAGCCCGAGCTTTCATaGTTGCTGGAAGTGTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQATKNALGAALNCCTTTKPELS*LLEVFK Trigger: CTTGAACACTTCCAGCAACCATGAAAGCTCGGGCTT...TGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | AATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTGTTCTCTGCCCAGTaGTTTGAGCAGAAGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NALGAALNCCTTTKSGSSLFSAQ*FEQKKF Trigger: AAACTTCTTCTGCTCAAACCACTGGGCAGAGAACAG...AGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | ATTTCAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCCTGTTCTCTGCCCAGTaGTTTGAGCAGAAGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISEFKASILANALKAETGLFSAQ*FEQKKF Trigger: AAACTTCTTCTGCTCAAACCACTGGGCAGAGAACAG...GCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | TGCAAATGCTCTCAAGGCAGAAACTGGCTGTTGACTTCCATATTTGTCTTCCCTAGCTTTCATGGTTGCTaGAAGTGTTCAAGAACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CKCSQGRNWLLTSIFVFPSFHGC*KCSRTA Trigger: CGCAGTTCTTGAACACTTCCAGCAACCATGAAAGCT...AGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACACCAAACCCCATCAAATaGTTGTTCTTCTGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQATKNALGAALNCCTTTPNPIK*LFFWKL Trigger: GAGCTTCCAGAAGAACAATCATTTGATGGGGTTTGG...TGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | AATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCCGTATTTAATTTCTTaGGCTGCAAGGGCATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NALGAALNCCTTTKSGSSPYLIS*AARACL Trigger: CAAACATGCCCTTGCAGCTCAAGAAATTAAATACGG...AGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | CAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGCAAACAGGAAACAGGTaGACTATCCCCATGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLKMHLVLLSTVVPQQNQQTGNR*TIPMRS Trigger: AGACCTCATGGGGATAGTGCACCTGTTTCCTGTTTG...CTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | AAATCTCTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCCTCTGCCCAGTGGTTTaGGCAGAAGAAGTTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSLCVCLVTEIHGILGYFLCPVV*AEEVSR Trigger: TCGGGAAACTTCTTCTGCTCAAACCACTGGGCAGAG...GAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAGAGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR TCA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGGGAACGCTTGAGAGTTaGGCTGATGACGTCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KIFPRLLATNELLEGCIKGTLES*ADDVSK Trigger: TTTGCTGACGTCATCAGCTCAACTCTCAAGCGTTCC...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACATTCGGACCATATTTCTaGACAAGCTCTATGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQATKNALGAALNCCTTTFGPYF*TSSMTL Trigger: GAGAGTCATAGAGCTTGTCCAGAAATATGGTCCGAA...TGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | AAATCTCTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCTATCCCCATGAGGTCTaGTCTGGTCCACAATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLCVCLVTEIHGILGYFYPHEV*SGPQWR Trigger: CCTCCATTGTGGACCAGACCAGACCTCATGGGGATA...GAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAGAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGAGAGATGGGGTGGCATaGTGTTCTCCCAAACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KIFPRLLATNELLEGCIKRDGVA*CSPKQE Trigger: TTCCTGTTTGGGAGAACACCATGCCACCCCATCTCT...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | AAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATTGGGTTTTCACAGTCTaGTCTCGACATGGTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQLKMHLVLLSTVVPQQNWVFTV*SRHGVS Trigger: ACTGACACCATGTCGAGACCAGACTGTGAAAACCCA...ATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | AAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCCGAGCTTTCATGGTTaGTGGAAGTGTTCAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQLKMHLVLLSTVVPQQNPSFHG*WKCSRK Trigger: CTTTCTTGAACACTTCCAGCAACCATGAAAGCTCGG...ATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020158.9 |
||
| CDS-3UTR GCA 90 bp | AATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTTTTAATTTCTTGAGCTaGAAGGGCATGTTTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: NALGAALNCCTTTKSGSSFNFLS*KGMFEW Trigger: CCATTCAAACATGCCCTTGCAGCTCAAGAAATTAAA...AGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | CTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAGATTCATCCGATTCCTaGTTAATCACATCTTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKQLKMHLVLLSTVVPQQDSSDS*LITSCR Trigger: CCTACAAGATGTGATTAAGCAGGAATCGGATGAATC...TTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR GCA 90 bp | AAATCTCTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCGAAGTGTTCAAGAACTaGGAGGGAGAGAAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLCVCLVTEIHGILGYFEVFKN*EGEKGR Trigger: CCTACCCTTCTCTCCCTCGCAGTTCTTGAACACTTC...GAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAGAGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGACTTCTGGATTCAAATaGTTGTGCCACCTCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KIFPRLLATNELLEGCIKTSGFK*LCHLSR Trigger: TCGGGAGAGGTGGCACAACCATTTGAATCCAGAAGT...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAATGGAATTTTCCTTCTaGGTTTTCACAGTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQATKNALGAALNCCTTTMEFSF*VFTVWS Trigger: AGACCAGACTGTGAAAACCCAGAAGGAAAATTCCAT...TGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | AAATCTCTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCTGTGTGCCTGGTAAATaGTTCTGTCCTCCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSLCVCLVTEIHGILGYFCVPGK*FCPPLL Trigger: CAGAAGAGGAGGACAGAATCATTTACCAGGCACACA...GAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAGAGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | CTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAATGGTGGAATTCCAGTaGTTCTTGATAGCATTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LKQLKMHLVLLSTVVPQQMVEFQ*FLIALS Trigger: TGATAATGCTATCAAGAACCACTGGAATTCCACCAT...TTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | TCTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAGCTTTCATGGTTGCTaGAAGTGTTCAAGAAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQATKNALGAALNCCTTTSFHGC*KCSRKN Trigger: ATTCTTTCTTGAACACTTCCAGCAACCATGAAAGCT...TGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020158.9 |
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| CDS-3UTR CCA 90 bp | CAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGATGGAATTTTCCTTCTaGGTTTTCACAGTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLKMHLVLLSTVVPQQNQMEFSF*VFTVWS Trigger: AGACCAGACTGTGAAAACCCAGAAGGAAAATTCCAT...CTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | TTATTTTGCTACAAGGCAGTAGATACACTGTCATTTCAGAATTCAAGGCCAGCAAGAATTCAAAACTGCTaGGATCACACCACGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFCYKAVDTLSFQNSRPARIQNC*DHTTKN Trigger: ATTCTTCGTGGTGTGATCTCAGCAGTTTTGAATTCT...TGCTGGCCTTGAATTCTGAAATGACAGTGTATCTACTGCCTTGTAGCAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | CAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGTTTAATTTCTTGAGCTaGAAGGGCATGTTTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: QLKMHLVLLSTVVPQQNQFNFLS*KGMFEW Trigger: CCATTCAAACATGCCCTTGCAGCTCAAGAAATTAAA...CTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | GTACACTTAGAAACCTACAGAGAATGTTCTTCCAAGTCAGAAAAACGCCCAAACATGGTGGAATTCCAGTaGTTCTTGATAGCATTATCA | + |
|
Preference number: 4 (lower is better) Translates to: VHLETYRECSSKSEKRPNMVEFQ*FLIALS Trigger: TGATAATGCTATCAAGAACCACTGGAATTCCACCAT...GTTTGGGCGTTTTTCTGACTTGGAAGAACATTCTCTGTAGGTTTCTAAGTGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR TCA 90 bp | AAATCTCTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCCCGTATTTAATTTCTTaGGCTGCAAGGGCATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSLCVCLVTEIHGILGYFPYLIS*AARACL Trigger: CAAACATGCCCTTGCAGCTCAAGAAATTAAATACGG...GAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAGAGATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR GCA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGGATTCATCCGATTCCTaGTTAATCACATCTTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIFPRLLATNELLEGCIKDSSDS*LITSCR Trigger: CCTACAAGATGTGATTAAGCAGGAATCGGATGAATC...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CCA 90 bp | AAATCTCTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCGGTTTTCTTAACTTCTaGATTCAAATGGTTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSLCVCLVTEIHGILGYFGFLNF*IQMVVP Trigger: TGGCACAACCATTTGAATCCAGAAGTTAAGAAAACC...GAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAGAGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CCA 90 bp | CGGACCGGAGGCCGTCATCTGGTCCTCTGTCTTCCCACAGGATGCTaGCTCCCAGGCACCACTGCATGGCTGCAAGGGACCCACCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTGGRHLVLCLPTGC*LPGTTAWLQGTHQG Trigger: CCCCTGGTGGGTCCCTTGCAGCCATGCAGTGGTGCCTGGGAGCCAGCATCCTGTGGGAAGACAGAGGACCAGATGACGGCCTCCGGTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS GCA 90 bp | AGCCGGACCGGAGGCCGTCATCTGGTCCTCTGTCTTCCCACAGGATaGTGGCTCCCAGGCACCACTGCATGGCTGCAAGGGACCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRTGGRHLVLCLPTG*WLPGTTAWLQGTHQ Trigger: CTGGTGGGTCCCTTGCAGCCATGCAGTGGTGCCTGGGAGCCAGCATCCTGTGGGAAGACAGAGGACCAGATGACGGCCTCCGGTCCGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 90 bp | CGCCTTTTTCGTAGGACGACCAGCGGAACCTTGCTGTGCCTCGCTTaGGGTGAGTCTGGGCCGAGGGATGCCTCGCTCAGCACTCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLFRRTTSGTLLCLA*GESGPRDASLSTRL Trigger: CAGGCGAGTGCTGAGCGAGGCATCCCTCGGCCCAGACTCACCCCAAGCGAGGCACAGCAAGGTTCCGCTGGTCGTCCTACGAAAAAGGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS GCA 90 bp | TGCCTCGCTCAGCACTCGCCTGGTCACCCTCAGGCTAGGCTCTCCTaGAGATCTAGTCCCATGGCCCTCTCTTTGCTGAAGCTGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CLAQHSPGHPQARLS*RSSPMALSLLKLEG Trigger: GCCTTCCAGCTTCAGCAAAGAGAGGGCCATGGGACTAGATCTGCAGGAGAGCCTAGCCTGAGGGTGACCAGGCGAGTGCTGAGCGAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS TCA 90 bp | GTGGCATGGTGTTCTCCCAAACAGGAAACAGGTGCACTATCCCCATaGGGTCTGGTCTGGTCCACAATGGAGGTGCTGTGCCACCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAWCSPKQETGALSP*GLVWSTMEVLCHPG Trigger: CCCCGGGTGGCACAGCACCTCCATTGTGGACCAGACCAGACCTCATGGGGATAGTGCACCTGTTTCCTGTTTGGGAGAACACCATGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 90 bp | GGTGTTCTCCCAAACAGGAAACAGGTGCACTATCCCCATGAGGTCTaGTCTGGTCCACAATGGAGGTGCTGTGCCACCCGGGGTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GVLPNRKQVHYPHEV*SGPQWRCCATRGSC Trigger: GCAGCTACCCCGGGTGGCACAGCACCTCCATTGTGGACCAGACCAGACCTCATGGGGATAGTGCACCTGTTTCCTGTTTGGGAGAACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS GCA 90 bp | GTCTGGTCTGGTCCACAATGGAGGTGCTGTGCCACCCGGGGTAGCTaGAAGTGTGGTTCTGTGTTGGTAATGCCTGCTGTCCCTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VWSGPQWRCCATRGS*KCGSVLVMPAVPSA Trigger: AGCTGAAGGGACAGCAGGCATTACCAACACAGAACCACACTTGCAGCTACCCCGGGTGGCACAGCACCTCCATTGTGGACCAGACCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 90 bp | AGGAAACAGGTGCACTATCCCCATGAGGTCTGGTCTGGTCCACAATaGAGGTGCTGTGCCACCCGGGGTAGCTGCAAGTGTGGTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RKQVHYPHEVWSGPQ*RCCATRGSCKCGSV Trigger: CACAGAACCACACTTGCAGCTACCCCGGGTGGCACAGCACCTCCATTGTGGACCAGACCAGACCTCATGGGGATAGTGCACCTGTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 90 bp | CCCAAACCCCATCAAATGATTGTTCTTCTGGAAGCTCGTGGCCACTaGCGTCTGGCTGGCTTTGGAAGGCTCCTGCAGGTAGCCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PKPHQMIVLLEARGH*RLAGFGRLLQVAFL Trigger: CAGGAAGGCTACCTGCAGGAGCCTTCCAAAGCCAGCCAGACGCCAGTGGCCACGAGCTTCCAGAAGAACAATCATTTGATGGGGTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS GCA 90 bp | AGGCAGAGATGGGGTGGCATGGTGTTCTCCCAAACAGGAAACAGGTaGACTATCCCCATGAGGTCTGGTCTGGTCCACAATGGAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RQRWGGMVFSQTGNR*TIPMRSGLVHNGGA Trigger: AGCACCTCCATTGTGGACCAGACCAGACCTCATGGGGATAGTGCACCTGTTTCCTGTTTGGGAGAACACCATGCCACCCCATCTCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS GCA 90 bp | TATTTGGGGCATCTGCCACAGGAGACGCCTGCGAGAACAGCTGGGTaGTCAGGCTGTTCTCTGCCCAGTGGTTTGAGCAGAAGAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YLGHLPQETPARTAG*SGCSLPSGLSRRSF Trigger: GAAACTTCTTCTGCTCAAACCACTGGGCAGAGAACAGCCTGAGCACCCAGCTGTTCTCGCAGGCGTCTCCTGTGGCAGATGCCCCAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 90 bp | CACTTTCTTCAGGTAGGGAGCCGGGATCTGCAGGCAGAGATGGGGTaGCATGGTGTTCTCCCAAACAGGAAACAGGTGCACTATCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HFLQVGSRDLQAEMG*HGVLPNRKQVHYPH Trigger: ATGGGGATAGTGCACCTGTTTCCTGTTTGGGAGAACACCATGCCACCCCATCTCTGCCTGCAGATCCCGGCTCCCTACCTGAAGAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 90 bp | AGAATATTTGGGGCATCTGCCACAGGAGACGCCTGCGAGAACAGCTaGGTGCTCAGGCTGTTCTCTGCCCAGTGGTTTGAGCAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RIFGASATGDACENS*VLRLFSAQWFEQKK Trigger: CTTCTTCTGCTCAAACCACTGGGCAGAGAACAGCCTGAGCACCCAGCTGTTCTCGCAGGCGTCTCCTGTGGCAGATGCCCCAAATATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | ACAACAAAATCAGGCTCTTCTCTCAGCCATGGAGCGCTCCACGCTGAGGAGCCACCTTCCTGTTCCACCTaGCGACGCATGGTGGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: TTKSGSSLSHGALHAEEPPSCST*RRMVEF Trigger: GAATTCCACCATGCGTCGCAAGGTGGAACAGGAAGG...TGGCTCCTCAGCGTGGAGCGCTCCATGGCTGAGAGAAGAGCCTGATTTTGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS GCA 90 bp | GGCTGCCGCAGCCGGCTGAGGGACGTTGACTATATTAACATGCAATaGGACAGGATAGGGAACGTGACTGGAGATGTTTTGTGCTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCRSRLRDVDYINMQ*DRIGNVTGDVLCFG Trigger: GCCGAAGCACAAAACATCTCCAGTCACGTTCCCTATCCTGTCGCATTGCATGTTAATATAGTCAACGTCCCTCAGCCGGCTGCGGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 90 bp | AGAGGAGTGGAGGGTAAGGTAGGTGCATCTAAGCCCGAGCTTTCATaGTTGCTGGAAGTGTTCAAGAACTGCGAGGGAGAGAAGGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGVEGKVGASKPELS*LLEVFKNCEGEKGR Trigger: CCTACCCTTCTCTCCCTCGCAGTTCTTGAACACTTCCAGCAACCATGAAAGCTCGGGCTTAGATGCACCTACCTTACCCTCCACTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS GCA 90 bp | CTTGATAGCATTATCAGTCCGTCCGGGCAGCAGCTTTGCGATCTCTaGCCATCTGTTCCCCAGACGCTTGTGTGCCTGGTAAATGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LDSIISPSGQQLCDL*PSVPQTLVCLVNDS Trigger: AGAATCATTTACCAGGCACACAAGCGTCTGGGGAACAGATGGGCAGAGATCGCAAAGCTGCTGCCCGGACGGACTGATAATGCTATCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS TCA 90 bp | TCCTTCTGGGTTTTCACAGTCTGGTCTCGACATGGTGTCAGTTTGTaGCCAATGAGAGGAGTGGAGGGTAAGGTAGGTGCATCTAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFWVFTVWSRHGVSL*PMRGVEGKVGASKP Trigger: GGGCTTAGATGCACCTACCTTACCCTCCACTCCTCTCATTGGTCACAAACTGACACCATGTCGAGACCAGACTGTGAAAACCCAGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | CACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCATTTCTGCCACCGGTGTaGGCACTGCACATCTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HLVLLSTVVPQQNQALLSFLPPV*ALHICP Trigger: CGGACAGATGTGCAGTGCCAACACCGGTGGCAGAAA...TGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTGTTTTTCTGCCACCGGTGTaGGCACTGCACATCTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: QNSRPAFLQMLSRQKLAVFLPPV*ALHICP Trigger: CGGACAGATGTGCAGTGCCAACACCGGTGGCAGAAA...AACAGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS GCA 90 bp | AACATGCAATGCGACAGGATAGGGAACGTGACTGGAGATGTTTTGTaGTTCGGCGATGTGGTAATAGGGATATTCGCTGTTGACGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NMQCDRIGNVTGDVL*FGDVVIGIFAVDGG Trigger: TCCTCCGTCAACAGCGAATATCCCTATTACCACATCGCCGAAGCACAAAACATCTCCAGTCACGTTCCCTATCCTGTCGCATTGCATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 90 bp | GCAAATTCTAAGAGGTTCTTAACATTGTCCAGAATGGTGCCCTGGTaGACGATCATGCACCTTGCTGGTGAGGCACTTTCTTCAGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ANSKRFLTLSRMVPW*TIMHLAGEALSSGR Trigger: CCTACCTGAAGAAAGTGCCTCACCAGCAAGGTGCATGATCGTCCACCAGGGCACCATTCTGGACAATGTTAAGAACCTCTTAGAATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTGTTGAGAAGGGTAGGCTTTaGACAGGGGAACGCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QNSRPAFLQMLSRQKLAVEKGRL*TGERLR Trigger: TCTCAAGCGTTCCCCTGTCAAAAGCCTACCCTTCTC...AACAGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS CCA 90 bp | TCTGCAAATTCTAAGAGGTTCTTAACATTGTCCAGAATGGTGCCCTaGTGGACGATCATGCACCTTGCTGGTGAGGCACTTTCTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SANSKRFLTLSRMVP*WTIMHLAGEALSSG Trigger: ACCTGAAGAAAGTGCCTCACCAGCAAGGTGCATGATCGTCCACCAGGGCACCATTCTGGACAATGTTAAGAACCTCTTAGAATTTGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATGTCCGGGCAGCAGCTTaGCGATCTCTGCCCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KQLKMHLVLLSTVVPQQNVRAAA*RSLPIC Trigger: ACAGATGGGCAGAGATCGCAAAGCTGCTGCCCGGAC...ATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | CTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAACCTTCCTGTTCCACCTaGCGACGCATGGTGGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LKQLKMHLVLLSTVVPQQPSCST*RRMVEF Trigger: GAATTCCACCATGCGTCGCAAGGTGGAACAGGAAGG...TTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | CACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAGTGACTGGAGATGTTTaGTGCTTCGGCGATGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HLVLLSTVVPQQNQALLSVTGDV*CFGDVV Trigger: TACCACATCGCCGAAGCACAAAACATCTCCAGTCAC...TGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | TTTCAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTGGACGATCATGCACCTaGCTGGTGAGGCACTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FQNSRPAFLQMLSRQKLAGRSCT*LVRHFL Trigger: AAGAAAGTGCCTCACCAGCAAGGTGCATGATCGTCC...AGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | TGCAAATGCTCTCAAGGCAGAAACTGGCTGTTGACTTCCATATTTGTCTTCCCTCGGTGGTCCACTCTCTaGAAACTCAGCCACAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: CKCSQGRNWLLTSIFVFPRWSTL*KLSHNS Trigger: GGAATTGTGGCTGAGTTTCAAGAGAGTGGACCACCG...AGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | TTTCAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTTTGACAGGGGAACGCTaGAGAGTTGAGCTGATGACG | + |
|
Preference number: 5 (lower is better) Translates to: FQNSRPAFLQMLSRQKLALTGER*RVELMT Trigger: CGTCATCAGCTCAACTCTCAAGCGTTCCCCTGTCAA...AGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCTGTTCTCCCTTTTAAGTGCTaGGCAATAACAGACCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: QNSRPAFLQMLSRQKLAVLPFKC*AITDQR Trigger: GCGTTGGTCTGTTATTGCCAAGCACTTAAAAGGGAG...AACAGCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | CTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCTTTGTGGTCCGGGCAGCAGCTTaGCGATCTCTGCCCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCVCLVTEIHGILGYFFVVRAAA*RSLPIC Trigger: ACAGATGGGCAGAGATCGCAAAGCTGCTGCCCGGAC...CACAAAGAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | TCTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAGGACGATCATGCACCTaGCTGGTGAGGCACTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SQATKNALGAALNCCTTTGRSCT*LVRHFL Trigger: AAGAAAGTGCCTCACCAGCAAGGTGCATGATCGTCC...TGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | CACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCAAAGAGGTTCTTAACATaGTCCAGAATGGTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HLVLLSTVVPQQNQALLSKRFLT*SRMVPW Trigger: CCAGGGCACCATTCTGGACAATGTTAAGAACCTCTT...TGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCAGAATTCAAGGCCAGCATTCTTGCAAATGCTCTCAAGGCAGAAACTGGCCCCGAGCTTTCATGGTaGCTGGAAGTGTTCAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISEFKASILANALKAETGPELSW*LEVFKN Trigger: GTTCTTGAACACTTCCAGCAACCATGAAAGCTCGGG...GCCAGTTTCTGCCTTGAGAGCATTTGCAAGAATGCTGGCCTTGAATTCTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS CCA 90 bp | AGAGGAGTGGAGGGTAAGGTAGGTGCATCTAAGCCCGAGCTTTCATaGTTGCTGGAAGTGTTCAAGAAAGAATCTATAAACTGGAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RGVEGKVGASKPELS*LLEVFKKESINWSV Trigger: AACACTCCAGTTTATAGATTCTTTCTTGAACACTTCCAGCAACCATGAAAGCTCGGGCTTAGATGCACCTACCTTACCCTCCACTCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020158.9 |
||
| CDS TCA 90 bp | GGCATGTTTGAATGGTGTGGGAGTTCGAGGAGAGCTTTCGAGGATTaGCCTTTTGATAGCTGGAGTTCTAAAGATGGAATTTTCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GMFEWCGSSRRAFED*PFDSWSSKDGIFLL Trigger: CAGAAGGAAAATTCCATCTTTAGAACTCCAGCTATCAAAAGGTCAATCCTCGAAAGCTCTCCTCGAACTCCCACACCATTCAAACATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | TCTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACACTCCCTTTTAAGTGCTaGGCAATAACAGACCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: SQATKNALGAALNCCTTTLPFKC*AITDQR Trigger: GCGTTGGTCTGTTATTGCCAAGCACTTAAAAGGGAG...TGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | CACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCAGGCTCTTCTCTCATCGAGGATTGACCTTTaGATAGCTGGAGTTCTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HLVLLSTVVPQQNQALLSSRIDL*IAGVLK Trigger: CTTTAGAACTCCAGCTATCAAAAGGTCAATCCTCGA...TGAGAGAAGAGCCTGATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | TTATTTTGCTACAAGGCAGTAGATACACTGTCATTTCAGAATTCAAGGCCAGCAGCTGCAAGGGCATGTTaGAATGGTGTGGGAGTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LFCYKAVDTLSFQNSRPAAARAC*NGVGVR Trigger: TCGAACTCCCACACCATTCAAACATGCCCTTGCAGC...TGCTGGCCTTGAATTCTGAAATGACAGTGTATCTACTGCCTTGTAGCAAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | AAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATCGGTGGTCCACTCTCTaGAAACTCAGCCACAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KQLKMHLVLLSTVVPQQNRWSTL*KLSHNS Trigger: GGAATTGTGGCTGAGTTTCAAGAGAGTGGACCACCG...ATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | AAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATTCTCTGCCCAGTGGTTaGAGCAGAAGAAGTTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KQLKMHLVLLSTVVPQQNSLPSG*SRRSFP Trigger: CGGGAAACTTCTTCTGCTCAAACCACTGGGCAGAGA...ATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAATGCTCTCAAGGCAGAAACTGGCTGTTGACTTCCATATTTGTCTTCCCTGGTACGGTAAAGGCTTaGAGGACATTGTCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: CKCSQGRNWLLTSIFVFPGTVKA*RTLSSS Trigger: AGATGAAGACAATGTCCTCAAAGCCTTTACCGTACC...AGGGAAGACAAATATGGAAGTCAACAGCCAGTTTCTGCCTTGAGAGCATTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | AAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAAATGTGACTGGAGATGTTTaGTGCTTCGGCGATGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KQLKMHLVLLSTVVPQQNVTGDV*CFGDVV Trigger: TACCACATCGCCGAAGCACAAAACATCTCCAGTCAC...ATTTTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGGCTGCAAGGGCATGTTaGAATGGTGTGGGAGTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: KIFPRLLATNELLEGCIKAARAC*NGVGVR Trigger: TCGAACTCCCACACCATTCAAACATGCCCTTGCAGC...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS-3UTR CAA 90 bp | CTCAAGCAACTAAAAATGCACTTGGTGCTGCTCTCAACTGTTGTACCACAACAAGGTACGGTAAAGGCTTaGAGGACATTGTCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LKQLKMHLVLLSTVVPQQGTVKA*RTLSSS Trigger: AGATGAAGACAATGTCCTCAAAGCCTTTACCGTACC...TTGTTGTGGTACAACAGTTGAGAGCAGCACCAAGTGCATTTTTAGTTGCTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | AAATCTCTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCTCTGGATTCAAATGGTaGTGCCACCTCTCCCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: KSLCVCLVTEIHGILGYFSGFKW*CHLSRH Trigger: GTGTCGGGAGAGGTGGCACAACCATTTGAATCCAGA...GAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAGAGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCTTTGTGAAGAGGTTCTTAACATaGTCCAGAATGGTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCVCLVTEIHGILGYFFVKRFLT*SRMVPW Trigger: CCAGGGCACCATTCTGGACAATGTTAAGAACCTCTT...CACAAAGAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGCCCGAGCTTTCATGGTaGCTGGAAGTGTTCAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KIFPRLLATNELLEGCIKPELSW*LEVFKK Trigger: TTTCTTGAACACTTCCAGCAACCATGAAAGCTCGGG...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020158.9 |
||
| CDS-3UTR CAA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGTCGAGGATTGACCTTTaGATAGCTGGAGTTCTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KIFPRLLATNELLEGCIKSRIDL*IAGVLK Trigger: CTTTAGAACTCCAGCTATCAAAAGGTCAATCCTCGA...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | AAGATATTTCCAAGATTATTAGCCACAAATGAGCTCCTAGAGGGTTGCATTAAGAAGGCTTTGAGGACATaGTCTTCATCTTCTGATACA | + |
|
Preference number: 5 (lower is better) Translates to: KIFPRLLATNELLEGCIKKALRT*SSSSDT Trigger: TGTATCAGAAGATGAAGACAATGTCCTCAAAGCCTT...CTTAATGCAACCCTCTAGGAGCTCATTTGTGGCTAATAATCTTGGAAATATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS-3UTR CAA 90 bp | AAATCTCTCTGTGTATGTTTAGTGACTGAGATACATGGAATACTGGGATATTTCAAGGCTTTGAGGACATaGTCTTCATCTTCTGATACA | + |
|
Preference number: 5 (lower is better) Translates to: KSLCVCLVTEIHGILGYFKALRT*SSSSDT Trigger: TGTATCAGAAGATGAAGACAATGTCCTCAAAGCCTT...GAAATATCCCAGTATTCCATGTATCTCAGTCACTAAACATACACAGAGAGATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 72 bp | CGTAGGACGACCAGCGGAACCTTGCTGTGCCTCGCTTaGGGTGAGTCTGGGCCGAGGGATGCCTCGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRTTSGTLLCLA*GESGPRDASLS Trigger: GCTGAGCGAGGCATCCCTCGGCCCAGACTCACCCCAAGCGAGGCACAGCAAGGTTCCGCTGGTCGTCCTACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS GCA 72 bp | GGAGGCCGTCATCTGGTCCTCTGTCTTCCCACAGGATaGTGGCTCCCAGGCACCACTGCATGGCTGCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GGRHLVLCLPTG*WLPGTTAWLQG Trigger: CCCTTGCAGCCATGCAGTGGTGCCTGGGAGCCAGCATCCTGTGGGAAGACAGAGGACCAGATGACGGCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 72 bp | GGCCGTCATCTGGTCCTCTGTCTTCCCACAGGATGCTaGCTCCCAGGCACCACTGCATGGCTGCAAGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: GRHLVLCLPTGC*LPGTTAWLQGT Trigger: GGTCCCTTGCAGCCATGCAGTGGTGCCTGGGAGCCAGCATCCTGTGGGAAGACAGAGGACCAGATGACGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 72 bp | GGGGCATCTGCCACAGGAGACGCCTGCGAGAACAGCTaGGTGCTCAGGCTGTTCTCTGCCCAGTGGTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GASATGDACENS*VLRLFSAQWFE Trigger: CTCAAACCACTGGGCAGAGAACAGCCTGAGCACCCAGCTGTTCTCGCAGGCGTCTCCTGTGGCAGATGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS CCA 72 bp | TTCACGTATTTCCGAGCCGGACCGGAGGCCGTCATCTaGTCCTCTGTCTTCCCACAGGATGCTGGCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FTYFRAGPEAVI*SSVFPQDAGSQ Trigger: CTGGGAGCCAGCATCCTGTGGGAAGACAGAGGACCAGATGACGGCCTCCGGTCCGGCTCGGAAATACGTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
||
| CDS GCA 72 bp | CAGCACTCGCCTGGTCACCCTCAGGCTAGGCTCTCCTaGAGATCTAGTCCCATGGCCCTCTCTTTGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QHSPGHPQARLS*RSSPMALSLLK Trigger: CTTCAGCAAAGAGAGGGCCATGGGACTAGATCTGCAGGAGAGCCTAGCCTGAGGGTGACCAGGCGAGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
||
| CDS CCA 72 bp | GTGCACTATCCCCATGAGGTCTGGTCTGGTCCACAATaGAGGTGCTGTGCCACCCGGGGTAGCTGCAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: VHYPHEVWSGPQ*RCCATRGSCKC Trigger: ACACTTGCAGCTACCCCGGGTGGCACAGCACCTCCATTGTGGACCAGACCAGACCTCATGGGGATAGTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS GCA 72 bp | GGTCCACAATGGAGGTGCTGTGCCACCCGGGGTAGCTaGAAGTGTGGTTCTGTGTTGGTAATGCCTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GPQWRCCATRGS*KCGSVLVMPAV Trigger: GACAGCAGGCATTACCAACACAGAACCACACTTGCAGCTACCCCGGGTGGCACAGCACCTCCATTGTGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CCA 72 bp | TGTTCTTCTGGAAGCTCGTGGCCACTGGCGTCTGGCTaGCTTTGGAAGGCTCCTGCAGGTAGCCTTCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: CSSGSSWPLASG*LWKAPAGSLPV Trigger: AACAGGAAGGCTACCTGCAGGAGCCTTCCAAAGCCAGCCAGACGCCAGTGGCCACGAGCTTCCAGAAGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CCA 72 bp | CCAAACAGGAAACAGGTGCACTATCCCCATGAGGTCTaGTCTGGTCCACAATGGAGGTGCTGTGCCACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PNRKQVHYPHEV*SGPQWRCCATR Trigger: CCGGGTGGCACAGCACCTCCATTGTGGACCAGACCAGACCTCATGGGGATAGTGCACCTGTTTCCTGTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CCA 72 bp | AGGGAGCCGGGATCTGCAGGCAGAGATGGGGTGGCATaGTGTTCTCCCAAACAGGAAACAGGTGCACTATCC | + |
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Preference number: 6 (lower is better) Translates to: REPGSAGRDGVA*CSPKQETGALS Trigger: GGATAGTGCACCTGTTTCCTGTTTGGGAGAACACCATGCCACCCCATCTCTGCCTGCAGATCCCGGCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 72 bp | TGTCCAGAATGGTGCCCTGGTGGACGATCATGCACCTaGCTGGTGAGGCACTTTCTTCAGGTAGGGAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: CPEWCPGGRSCT*LVRHFLQVGSR Trigger: CCGGCTCCCTACCTGAAGAAAGTGCCTCACCAGCAAGGTGCATGATCGTCCACCAGGGCACCATTCTGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS TCA 72 bp | TCGCTGTTGACGGAGGACTGGCCACTTGGAGAGAGCTaGGATGGAGGTGAGGCATGCCCAAACCCCATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLLTEDWPLGES*DGGEACPNPIK Trigger: TTTGATGGGGTTTGGGCATGCCTCACCTCCATCTCAGCTCTCTCCAAGTGGCCAGTCCTCCGTCAACAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS TCA 72 bp | TCTCCTGCAGATCTAGTCCCATGGCCCTCTCTTTGCTaGAGCTGGAAGGCTTTGCCTGTGGGCTGCTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: SPADLVPWPSLC*SWKALPVGCWL Trigger: TAGCCAGCAGCCCACAGGCAAAGCCTTCCAGCTTCAGCAAAGAGAGGGCCATGGGACTAGATCTGCAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS GCA 72 bp | ATTATCAGTCCGTCCGGGCAGCAGCTTTGCGATCTCTaGCCATCTGTTCCCCAGACGCTTGTGTGCCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: IISPSGQQLCDL*PSVPQTLVCLV Trigger: TACCAGGCACACAAGCGTCTGGGGAACAGATGGGCAGAGATCGCAAAGCTGCTGCCCGGACGGACTGATAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS GCA 72 bp | GTAAGAATATTTGGGGCATCTGCCACAGGAGACGCCTaGGAGAACAGCTGGGTGCTCAGGCTGTTCTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRIFGASATGDA*ENSWVLRLFSA Trigger: GGCAGAGAACAGCCTGAGCACCCAGCTGTTCTCGCAGGCGTCTCCTGTGGCAGATGCCCCAAATATTCTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 72 bp | TGTGCCACCCGGGGTAGCTGCAAGTGTGGTTCTGTGTaGGTAATGCCTGCTGTCCCTTCAGCTCGTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CATRGSCKCGSV*VMPAVPSARSL Trigger: CAGAGAACGAGCTGAAGGGACAGCAGGCATTACCAACACAGAACCACACTTGCAGCTACCCCGGGTGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 90 bp | TGGAGGTGCTGTGCCACCCGGGGTAGCTGCAAGTGTGGTTCTGTGTaGGTAATGCCTGCTGTCCCTTCAGCTCGTTCTCTGTTGACATCA | + |
|
Preference number: 6 (lower is better) Translates to: WRCCATRGSCKCGSV*VMPAVPSARSLLTS Trigger: TGATGTCAACAGAGAACGAGCTGAAGGGACAGCAGGCATTACCAACACAGAACCACACTTGCAGCTACCCCGGGTGGCACAGCACCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS GCA 72 bp | CAGGGACCTTTGATGAGTTCAGGGTTCAGCACTTTCTaGCACCGGTGTTGGCACTGCACATCTGTCCGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QGPLMSSGFSTF*HRCWHCTSVRL Trigger: CAACCGGACAGATGTGCAGTGCCAACACCGGTGGCAGAAAGTGCTGAACCCTGAACTCATCAAAGGTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS GCA 72 bp | CTTGATAGCATTATCAGTCCGTCCGGGCAGCAGCTTTaGGATCTCTGCCCATCTGTTCCCCAGACGCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LDSIISPSGQQL*DLCPSVPQTLV Trigger: CACAAGCGTCTGGGGAACAGATGGGCAGAGATCGCAAAGCTGCTGCCCGGACGGACTGATAATGCTATCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS TCA 72 bp | TGTTCTCCCAAACAGGAAACAGGTGCACTATCCCCATaGGGTCTGGTCTGGTCCACAATGGAGGTGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSPKQETGALSP*GLVWSTMEVLC Trigger: GCACAGCACCTCCATTGTGGACCAGACCAGACCTCATGGGGATAGTGCACCTGTTTCCTGTTTGGGAGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS TCA 72 bp | CAGCTGGGTGCTCAGGCTGTTCTCTGCCCAGTGGTTTaGGCAGAAGAAGTTTCCCGATTTCTCAGTTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: QLGAQAVLCPVV*AEEVSRFLSWR Trigger: TCGCCAACTGAGAAATCGGGAAACTTCTTCTGCTCAAACCACTGGGCAGAGAACAGCCTGAGCACCCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS GCA 72 bp | TGGGGTGGCATGGTGTTCTCCCAAACAGGAAACAGGTaGACTATCCCCATGAGGTCTGGTCTGGTCCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: WGGMVFSQTGNR*TIPMRSGLVHN Trigger: ATTGTGGACCAGACCAGACCTCATGGGGATAGTGCACCTGTTTCCTGTTTGGGAGAACACCATGCCACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 72 bp | ACAGCTGGGTGCTCAGGCTGTTCTCTGCCCAGTGGTTaGAGCAGAAGAAGTTTCCCGATTTCTCAGTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TAGCSGCSLPSG*SRRSFPISQLA Trigger: CGCCAACTGAGAAATCGGGAAACTTCTTCTGCTCAAACCACTGGGCAGAGAACAGCCTGAGCACCCAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 72 bp | GAGGGAGAGAAGGGTAGGCTTTTGACAGGGGAACGCTaGAGAGTTGAGCTGATGACGTCAGCAAAGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: EGEKGRLLTGER*RVELMTSAKRE Trigger: CTCCCTCTTTGCTGACGTCATCAGCTCAACTCTCAAGCGTTCCCCTGTCAAAAGCCTACCCTTCTCTCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS CCA 72 bp | GAGGGTAAGGTAGGTGCATCTAAGCCCGAGCTTTCATaGTTGCTGGAAGTGTTCAAGAACTGCGAGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EGKVGASKPELS*LLEVFKNCEGE Trigger: CTCTCCCTCGCAGTTCTTGAACACTTCCAGCAACCATGAAAGCTCGGGCTTAGATGCACCTACCTTACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS CAA 72 bp | GTGTTCAAGAACTGCGAGGGAGAGAAGGGTAGGCTTTaGACAGGGGAACGCTTGAGAGTTGAGCTGATGACG | + |
|
Preference number: 6 (lower is better) Translates to: VFKNCEGEKGRL*TGERLRVELMT Trigger: CGTCATCAGCTCAACTCTCAAGCGTTCCCCTGTCAAAAGCCTACCCTTCTCTCCCTCGCAGTTCTTGAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS CAA 90 bp | TTGCTGGAAGTGTTCAAGAACTGCGAGGGAGAGAAGGGTAGGCTTTaGACAGGGGAACGCTTGAGAGTTGAGCTGATGACGTCAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLEVFKNCEGEKGRL*TGERLRVELMTSAK Trigger: CTTTGCTGACGTCATCAGCTCAACTCTCAAGCGTTCCCCTGTCAAAAGCCTACCCTTCTCTCCCTCGCAGTTCTTGAACACTTCCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS CAA 72 bp | GGTAAGGTAGGTGCATCTAAGCCCGAGCTTTCATGGTaGCTGGAAGTGTTCAAGAACTGCGAGGGAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GKVGASKPELSW*LEVFKNCEGEK Trigger: CTTCTCTCCCTCGCAGTTCTTGAACACTTCCAGCAACCATGAAAGCTCGGGCTTAGATGCACCTACCTTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188495.8 |
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| CDS TCA 72 bp | GTTTTCACAGTCTGGTCTCGACATGGTGTCAGTTTGTaGCCAATGAGAGGAGTGGAGGGTAAGGTAGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VFTVWSRHGVSL*PMRGVEGKVGA Trigger: TGCACCTACCTTACCCTCCACTCCTCTCATTGGTCACAAACTGACACCATGTCGAGACCAGACTGTGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS TCA 72 bp | ACATCTTGTAGGTCCTCCACTGCATGGGAGGGGGTCTaGGGTAGCATCTTCAGGGGACCGTATTTAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSCRSSTAWEGV*GSIFRGPYLIS Trigger: AGAAATTAAATACGGTCCCCTGAAGATGCTACCTCAGACCCCCTCCCATGCAGTGGAGGACCTACAAGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CCA 72 bp | AAGAGGTTCTTAACATTGTCCAGAATGGTGCCCTGGTaGACGATCATGCACCTTGCTGGTGAGGCACTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KRFLTLSRMVPW*TIMHLAGEALS Trigger: AGAAAGTGCCTCACCAGCAAGGTGCATGATCGTCCACCAGGGCACCATTCTGGACAATGTTAAGAACCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CCA 72 bp | TCTAAGAGGTTCTTAACATTGTCCAGAATGGTGCCCTaGTGGACGATCATGCACCTTGCTGGTGAGGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: SKRFLTLSRMVP*WTIMHLAGEAL Trigger: AAGTGCCTCACCAGCAAGGTGCATGATCGTCCACCAGGGCACCATTCTGGACAATGTTAAGAACCTCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 90 bp | GGTTCTGTGTTGGTAATGCCTGCTGTCCCTTCAGCTCGTTCTCTGTaGACATCAGGAGCAACTCCAGCTCCTTTATTCGCTTTTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSVLVMPAVPSARSL*TSGATPAPLFAFPS Trigger: AGAAGGAAAAGCGAATAAAGGAGCTGGAGTTGCTCCTGATGTCAACAGAGAACGAGCTGAAGGGACAGCAGGCATTACCAACACAGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS GCA 72 bp | TGCGACAGGATAGGGAACGTGACTGGAGATGTTTTGTaGTTCGGCGATGTGGTAATAGGGATATTCGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: CDRIGNVTGDVL*FGDVVIGIFAV Trigger: AACAGCGAATATCCCTATTACCACATCGCCGAAGCACAAAACATCTCCAGTCACGTTCCCTATCCTGTCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS GCA 72 bp | AGCCGGCTGAGGGACGTTGACTATATTAACATGCAATaGGACAGGATAGGGAACGTGACTGGAGATGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SRLRDVDYINMQ*DRIGNVTGDVL Trigger: CAAAACATCTCCAGTCACGTTCCCTATCCTGTCGCATTGCATGTTAATATAGTCAACGTCCCTCAGCCGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 72 bp | CAATGCGACAGGATAGGGAACGTGACTGGAGATGTTTaGTGCTTCGGCGATGTGGTAATAGGGATATTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: QCDRIGNVTGDV*CFGDVVIGIFA Trigger: AGCGAATATCCCTATTACCACATCGCCGAAGCACAAAACATCTCCAGTCACGTTCCCTATCCTGTCGCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 90 bp | ATTAACATGCAATGCGACAGGATAGGGAACGTGACTGGAGATGTTTaGTGCTTCGGCGATGTGGTAATAGGGATATTCGCTGTTGACGGA | + |
|
Preference number: 6 (lower is better) Translates to: INMQCDRIGNVTGDV*CFGDVVIGIFAVDG Trigger: TCCGTCAACAGCGAATATCCCTATTACCACATCGCCGAAGCACAAAACATCTCCAGTCACGTTCCCTATCCTGTCGCATTGCATGTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 90 bp | TGCAAGGGACCCACCAGGGGCCTGTTCTTAGGTACGGTAAAGGCTTaGAGGACATTGTCTTCATCTTCTGATACAGGTGTCATTAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: CKGPTRGLFLGTVKA*RTLSSSSDTGVIKT Trigger: TGTTTTAATGACACCTGTATCAGAAGATGAAGACAATGTCCTCAAAGCCTTTACCGTACCTAAGAACAGGCCCCTGGTGGGTCCCTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS GCA 72 bp | CAGGAGGTTTTCTTAACTTCTGGATTCAAATGGTTGTaGCACCTCTCCCGACACTGCTTTCCAATTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: QEVFLTSGFKWL*HLSRHCFPILP Trigger: AGGGAGAATTGGAAAGCAGTGTCGGGAGAGGTGGCACAACCATTTGAATCCAGAAGTTAAGAAAACCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 72 bp | GTCCAGGAGGTTTTCTTAACTTCTGGATTCAAATGGTaGTGCCACCTCTCCCGACACTGCTTTCCAATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VQEVFLTSGFKW*CHLSRHCFPIL Trigger: GAGAATTGGAAAGCAGTGTCGGGAGAGGTGGCACAACCATTTGAATCCAGAAGTTAAGAAAACCTCCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 90 bp | GGAGTGGAGGGTAAGGTAGGTGCATCTAAGCCCGAGCTTTCATGGTaGCTGGAAGTGTTCAAGAAAGAATCTATAAACTGGAGTGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GVEGKVGASKPELSW*LEVFKKESINWSVS Trigger: AGAAACACTCCAGTTTATAGATTCTTTCTTGAACACTTCCAGCAACCATGAAAGCTCGGGCTTAGATGCACCTACCTTACCCTCCACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020158.9 |
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| CDS CAA 90 bp | CCCACCAGGGGCCTGTTCTTAGGTACGGTAAAGGCTTTGAGGACATaGTCTTCATCTTCTGATACAGGTGTCATTAAAACAGAGCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PTRGLFLGTVKALRT*SSSSDTGVIKTELV Trigger: TACAAGCTCTGTTTTAATGACACCTGTATCAGAAGATGAAGACAATGTCCTCAAAGCCTTTACCGTACCTAAGAACAGGCCCCTGGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 72 bp | TGGAGTGTTTCTGCAAATTCTAAGAGGTTCTTAACATaGTCCAGAATGGTGCCCTGGTGGACGATCATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: WSVSANSKRFLT*SRMVPWWTIMH Trigger: GTGCATGATCGTCCACCAGGGCACCATTCTGGACAATGTTAAGAACCTCTTAGAATTTGCAGAAACACTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 90 bp | TCTATAAACTGGAGTGTTTCTGCAAATTCTAAGAGGTTCTTAACATaGTCCAGAATGGTGCCCTGGTGGACGATCATGCACCTTGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SINWSVSANSKRFLT*SRMVPWWTIMHLAG Trigger: ACCAGCAAGGTGCATGATCGTCCACCAGGGCACCATTCTGGACAATGTTAAGAACCTCTTAGAATTTGCAGAAACACTCCAGTTTATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CCA 72 bp | GAGGGTAAGGTAGGTGCATCTAAGCCCGAGCTTTCATaGTTGCTGGAAGTGTTCAAGAAAGAATCTATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: EGKVGASKPELS*LLEVFKKESIN Trigger: GTTTATAGATTCTTTCTTGAACACTTCCAGCAACCATGAAAGCTCGGGCTTAGATGCACCTACCTTACCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020158.9 |
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| CDS CAA 72 bp | GGTAAGGTAGGTGCATCTAAGCCCGAGCTTTCATGGTaGCTGGAAGTGTTCAAGAAAGAATCTATAAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: GKVGASKPELSW*LEVFKKESINW Trigger: CCAGTTTATAGATTCTTTCTTGAACACTTCCAGCAACCATGAAAGCTCGGGCTTAGATGCACCTACCTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020158.9 |
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| CDS CAA 72 bp | GTGGGAGTTCGAGGAGAGCTTTCGAGGATTGACCTTTaGATAGCTGGAGTTCTAAAGATGGAATTTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VGVRGELSRIDL*IAGVLKMEFSF Trigger: GAAGGAAAATTCCATCTTTAGAACTCCAGCTATCAAAAGGTCAATCCTCGAAAGCTCTCCTCGAACTCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CCA 72 bp | TTGATAGCTGGAGTTCTAAAGATGGAATTTTCCTTCTaGGTTTTCACAGTCTGGTCTCGACATGGTGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LIAGVLKMEFSF*VFTVWSRHGVS Trigger: ACTGACACCATGTCGAGACCAGACTGTGAAAACCCAGAAGGAAAATTCCATCTTTAGAACTCCAGCTATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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| CDS CAA 72 bp | GGCCTGTTCTTAGGTACGGTAAAGGCTTTGAGGACATaGTCTTCATCTTCTGATACAGGTGTCATTAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: GLFLGTVKALRT*SSSSDTGVIKT Trigger: TGTTTTAATGACACCTGTATCAGAAGATGAAGACAATGTCCTCAAAGCCTTTACCGTACCTAAGAACAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020158.9 ENSMUST00000188495.8 |
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