Pregenerated sensors for MYADM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068566Ensembl transcript IDs: ENSMUST00000096744.8, ENSMUST00000164553.8, ENSMUST00000203328.4, ENSMUST00000203566.3
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGGGTCTGGGACCTGAACCCTGGTTCTCACGGTGCCAAAGCAAGTaGTTTCAACAACCCCTGAGCGCCCAAGGCTCCCACACCCCCATT | + |
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Preference number: 1 (lower is better) Translates to: LGLGPEPWFSRCQSK*FQQPLSAQGSHTPI Trigger: AATGGGGGTGTGGGAGCCTTGGGCGCTCAGGGGTTGTTGAAAGCACTTGCTTTGGCACCGTGAGAACCAGGGTTCAGGTCCCAGACCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR CCA 90 bp | GTGGTTCTCCTCTACAGGACCTGGGTTCAATTCCCTGTACCCACATaGCAGCTCACAACTGTCTGTAACTCCCGTTCCAGGGGACCCAAT | + |
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Preference number: 1 (lower is better) Translates to: VVLLYRTWVQFPVPT*QLTTVCNSRSRGPN Trigger: ATTGGGTCCCCTGGAACGGGAGTTACAGACAGTTGTGAGCTGCCATGTGGGTACAGGGAATTGAACCCAGGTCCTGTAGAGGAGAACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR CCA 90 bp | CGGGGAGGCTGGAGAGATAGTTCAGTGGTTCTCCTCTACAGGACCTaGGTTCAATTCCCTGTACCCACATGGCAGCTCACAACTGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: RGGWRDSSVVLLYRT*VQFPVPTWQLTTVC Trigger: ACAGACAGTTGTGAGCTGCCATGTGGGTACAGGGAATTGAACCCAGGTCCTGTAGAGGAGAACCACTGAACTATCTCTCCAGCCTCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR TCA 90 bp | GTGGGTAACTGTAAAGGAGTGTGGGATGTGTGGGGCCAGCACCTTTaGGGGGTGAGGGAAAGAAAGCAAGATTTCTTAGGGCTCCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: VGNCKGVWDVWGQHL*GVRERKQDFLGLPR Trigger: TCTTGGGAGCCCTAAGAAATCTTGCTTTCTTTCCCTCACCCCTCAAAGGTGCTGGCCCCACACATCCCACACTCCTTTACAGTTACCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR GCA 90 bp | ATTAAGAAGACTATCCGGCTATGGTATATAGCTCGGATGGTAAAGTaGTTGCCCAGCATGGGCCAGTCTCTGGGCTCAGTCCCCAAAACT | + |
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Preference number: 1 (lower is better) Translates to: IKKTIRLWYIARMVK*LPSMGQSLGSVPKT Trigger: AGTTTTGGGGACTGAGCCCAGAGACTGGCCCATGCTGGGCAAGCACTTTACCATCCGAGCTATATACCATAGCCGGATAGTCTTCTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR CCA 90 bp | CAACGAGGGTATGGTGGTATATCTGTACTCTCAGCACCCAGAAGGTaGAGCCAGAAAGACAAGGGTTCAATGGAAGCCTCACCTACACAA | + |
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Preference number: 1 (lower is better) Translates to: QRGYGGISVLSAPRR*SQKDKGSMEASPTQ Trigger: TTGTGTAGGTGAGGCTTCCATTGAACCCTTGTCTTTCTGGCTCCACCTTCTGGGTGCTGAGAGTACAGATATACCACCATACCCTCGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR CCA 90 bp | AATCACCTCTCAGCACTGGGACATTGTATTTCTGAATTGCCCAAGTaGTATTTTCTTCCTGAATCTGTGTGTATTGCTAGGGACAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: NHLSALGHCISELPK*YFLPESVCIARDRP Trigger: AGGCCTGTCCCTAGCAATACACACAGATTCAGGAAGAAAATACCACTTGGGCAATTCAGAAATACAATGTCCCAGTGCTGAGAGGTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR CCA 90 bp | TATAAAATGTATGTTCCTGTGAGTGTAGTCGTGGAGGCCAGAAAATaGCACCATCTGTCATTTCCTTCACTGCGTATTTGTCTAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: YKMYVPVSVVVEARK*HHLSFPSLRICLRQ Trigger: CTGCCTTAGACAAATACGCAGTGAAGGAAATGACAGATGGTGCCATTTTCTGGCCTCCACGACTACACTCACAGGAACATACATTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTCTCACCTCTCTCTTGGAGTCCTTCATTCCTCCCCACCCACCCGGAGAGGTGGGAAAGGGTGACTaGCAGCAGGAGCTACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LSLTSLLESFIPPHPPGEVGKGD*QQELQE Trigger: TTCCTGTAGCTCCTGCTGTCAGTCACCCTTTCCCAC...CTCTCCGGGTGGGTGGGGAGGAATGAAGGACTCCAAGAGAGAGGTGAGACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGCAGGCATGCTTTGGCAATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGGGCTGCAAGGAGAGATaGGGAAGGGAGCCCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: GRQACFGNEAPKETLGVKGCKER*GREPLV Trigger: GACAAGGGGCTCCCTTCCCCATCTCTCCTTGCAGCC...CTTTACTCCAAGGGTCTCTTTAGGGGCCTCATTGCCAAAGCATGCCTGCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR-3UTR TCA 90 bp | GCAAGAAGCAAGCAGCACATGAGAGGACCCGGGTTCATGTACAGCACACACAAGTGGGTGGCCTGGCAGTaGTGGCACACACCCTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: ARSKQHMRGPGFMYSTHKWVAWQ*WHTPLS Trigger: GCTTAAGGGTGTGTGCCATCACTGCCAGGCCACCCA...CTTGTGTGTGCTGTACATGAACCCGGGTCCTCTCATGTGCTGCTTGCTTCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR-3UTR GCA 90 bp | AACGAGGGTATGGTGGTATATCTGTACTCTCAGCACCCAGAAGGTGGAGCCAGAGCAGGCAGGCAGGCATaGTTTGGCAATGAGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: NEGMVVYLYSQHPEGGARAGRQA*FGNEAP Trigger: AGGGGCCTCATTGCCAAAGCATGCCTGCCTGCCTGC...TCTGGCTCCACCTTCTGGGTGCTGAGAGTACAGATATACCACCATACCCTCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTATTGCTAGGGACAGGCCTGCCAGGGCCTTTGTACATGCTAAGCAAGTAGGCTGCAAGGAGAGATaGGGAAGGGAGCCCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: VCIARDRPARAFVHAKQVGCKER*GREPLV Trigger: GACAAGGGGCTCCCTTCCCCATCTCTCCTTGCAGCC...TACTTGCTTAGCATGTACAAAGGCCCTGGCAGGCCTGTCCCTAGCAATACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | CGGTGCCAAAGCAAGTGCTTTCAACAACCCCTGAGCGCCCAAGGCTCCCACACCACAACGAGGGTATGGTaGTATATCTGTACTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RCQSKCFQQPLSAQGSHTTTRVW*YICTLS Trigger: GCTGAGAGTACAGATATACCACCATACCCTCGTTGT...GGTGTGGGAGCCTTGGGCGCTCAGGGGTTGTTGAAAGCACTTGCTTTGGCACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR-3UTR TCA 90 bp | GCAAGAAGCAAGCAGCACATGAGAGGACCCGGGTTCATGTACAGCACACACAAGAGCAGGCAGATATCTTaGGTTAGAGGGCAGCCTCGT | + |
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Preference number: 2 (lower is better) Translates to: ARSKQHMRGPGFMYSTHKSRQIS*VRGQPR Trigger: ACGAGGCTGCCCTCTAACTCAAGATATCTGCCTGCT...CTTGTGTGTGCTGTACATGAACCCGGGTCCTCTCATGTGCTGCTTGCTTCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTAACGGGGCTACACAACGAGGGTATGGTGGTATATCTGTACTCTCAGCAGGCTGCAAGGAGAGATaGGGAAGGGAGCCCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: LFNGATQRGYGGISVLSAGCKER*GREPLV Trigger: GACAAGGGGCTCCCTTCCCCATCTCTCCTTGCAGCC...TGCTGAGAGTACAGATATACCACCATACCCTCGTTGTGTAGCCCCGTTAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | TTATATGGCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACGGCTGCAAGGAGAGATaGGGAAGGGAGCCCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: LYGLLPNPLNTHTHTHTHGCKER*GREPLV Trigger: GACAAGGGGCTCCCTTCCCCATCTCTCCTTGCAGCC...GTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGCCATATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR CAA 90 bp | GCCCCTTCTGTCATCAAACTGAAGAATCTGAGTCTCACCTCTCTCTaGGAGTCCTTCATTCCTCCCCACCCACCCGGAGAGAAAGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: APSVIKLKNLSLTSL*ESFIPPHPPGEKES Trigger: GCTTTCTTTCTCTCCGGGTGGGTGGGGAGGAATGAAGGACTCCAAGAGAGAGGTGAGACTCAGATTCTTCAGTTTGATGACAGAAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR CAA 90 bp | AAGAAGACTATCCGGCTATGGTATATAGCTCGGATGGTAAAGTGCTaGCCCAGCATGGGCCAGTCTCTGGGCTCAGTCCCCAAAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: KKTIRLWYIARMVKC*PSMGQSLGSVPKTA Trigger: TGCAGTTTTGGGGACTGAGCCCAGAGACTGGCCCATGCTGGGCAAGCACTTTACCATCCGAGCTATATACCATAGCCGGATAGTCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR-3UTR TCA 90 bp | GCATGCTTTGGCAATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGAACTGCAAATGGGGCCAGCACCTTTaGGGGGTGAGGGAAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: ACFGNEAPKETLGVKNCKWGQHL*GVRERK Trigger: CTTTCTTTCCCTCACCCCTCAAAGGTGCTGGCCCCA...TTTGCAGTTCTTTACTCCAAGGGTCTCTTTAGGGGCCTCATTGCCAAAGCATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACACACACAGAACGAGGCAAACTGTaGAGCCACAGCTCAAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: ACFPIPLTHTHTHTHTHTERGKL*SHSSRV Trigger: TACCCTTGAGCTGTGGCTCCACAGTTTGCCTCGTTC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTATTGCTAGGGACAGGCCTGCCAGGGCCTTTGTACATGCTAAGCAAGTAGGGATTCGGGGAGGCTaGAGAGATAGTTCAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: VCIARDRPARAFVHAKQVGIRGG*RDSSVV Trigger: AACCACTGAACTATCTCTCCAGCCTCCCCGAATCCC...TACTTGCTTAGCATGTACAAAGGCCCTGGCAGGCCTGTCCCTAGCAATACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR-3UTR GCA 90 bp | GCAAGAAGCAAGCAGCACATGAGAGGACCCGGGTTCATGTACAGCACACACAAGAGTAGAGGCAGAGACTaGATAATGCTGACTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: ARSKQHMRGPGFMYSTHKSRGRD*IMLTSG Trigger: GCCAGAAGTCAGCATTATGCAGTCTCTGCCTCTACT...CTTGTGTGTGCTGTACATGAACCCGGGTCCTCTCATGTGCTGCTTGCTTCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACACACACAAGCACCTTTGAGGGGTaGGGGAAAGAAAGCAAGATT | + |
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Preference number: 2 (lower is better) Translates to: ACFPIPLTHTHTHTHTHTSTFEG*GKESKI Trigger: AATCTTGCTTTCTTTCCCTCACCCCTCAAAGGTGCT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | TATGGTGGTATATCTGTACTCTCAGCACCCAGAAGGTGGAGCCAGAAAGACAAGTTAAGACCATATGGGTaGCCTGGCAGTGATGGCACA | + |
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Preference number: 2 (lower is better) Translates to: YGGISVLSAPRRWSQKDKLRPYG*PGSDGT Trigger: TGTGCCATCACTGCCAGGCCACCCATATGGTCTTAA...CTTGTCTTTCTGGCTCCACCTTCTGGGTGCTGAGAGTACAGATATACCACCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTTTACTTGTAATCCCAGCACTGGAGGAGGTAGGACTTGGCTACATATTGTCAGCACCCAGAAGGTaGAGCCAGAAAGACAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: WLLLVIPALEEVGLGYILSAPRR*SQKDKG Trigger: ACCCTTGTCTTTCTGGCTCCACCTTCTGGGTGCTGA...CAATATGTAGCCAAGTCCTACCTCCTCCAGTGCTGGGATTACAAGTAAAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR-3UTR TCA 90 bp | GCATGCTTTGGCAATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGAACTGCAAAAGCACCTTTGAGGGGTaGGGGAAAGAAAGCAAGATT | + |
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Preference number: 2 (lower is better) Translates to: ACFGNEAPKETLGVKNCKSTFEG*GKESKI Trigger: AATCTTGCTTTCTTTCCCTCACCCCTCAAAGGTGCT...TTTGCAGTTCTTTACTCCAAGGGTCTCTTTAGGGGCCTCATTGCCAAAGCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR-3UTR GCA 90 bp | TCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACAGAGAAACCCTGGGGGCTTGGAGTAAAGAACTaGAAAAGAGTGTGGGTAACT | + |
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Preference number: 2 (lower is better) Translates to: SSTEQIQDSQGYTEKPWGLGVKN*KRVWVT Trigger: AGTTACCCACACTCTTTTGCAGTTCTTTACTCCAAG...CCCCCAGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR-3UTR GCA 90 bp | AATCCCAGCACTGGAGGAGGTAGGACTTGGCTACATATTGAGTTTGAGGCCAGCATACCCTCACAGACATaGATGCTGGCAAATCAACAA | + |
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Preference number: 2 (lower is better) Translates to: NPSTGGGRTWLHIEFEASIPSQT*MLANQQ Trigger: TTGTTGATTTGCCAGCATGCATGTCTGTGAGGGTAT...GCTGGCCTCAAACTCAATATGTAGCCAAGTCCTACCTCCTCCAGTGCTGGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTCTAAGCTACTTGCCAAACCATAGTGCCTTGTGTTTCTCAAGGGACTTTAGAACATTATGGATGTaGGGGGTGGGAAAGGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: FPLSYLPNHSALCFSRDFRTLWM*GVGKGD Trigger: GTCACCCTTTCCCACCCCTCACATCCATAATGTTCT...AAAGTCCCTTGAGAAACACAAGGCACTATGGTTTGGCAAGTAGCTTAGAGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACACACACACTTGGAGTAAAGAACTaGAAAAGAGTGTGGGTAACT | + |
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Preference number: 2 (lower is better) Translates to: ACFPIPLTHTHTHTHTHTLGVKN*KRVWVT Trigger: AGTTACCCACACTCTTTTGCAGTTCTTTACTCCAAG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAAGCAAGCAGCACATGAGAGGACCCGGGTTCATGTACAGCACACACAAGGAGAGAGATACCATGTaGATATTTTTGTTGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: ARSKQHMRGPGFMYSTHKERDTM*IFLLGL Trigger: CAAACCCAACAAAAATATCCACATGGTATCTCTCTC...CTTGTGTGTGCTGTACATGAACCCGGGTCCTCTCATGTGCTGCTTGCTTCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | GAGTTAGAGGGCAGCCTCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACGAGAGAGATACCATGTaGATATTTTTGTTGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: ELEGSLVYRANSGQPRLHERDTM*IFLLGL Trigger: CAAACCCAACAAAAATATCCACATGGTATCTCTCTC...GTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGAGGCTGCCCTCTAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGGAGTAAAGAACTGCAAAAGAGTGTGGGTAACTGTAAAGGAGTGTGGGATGAGCACCTTTGAGGGGTaGGGGAAAGAAAGCAAGATT | + |
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Preference number: 2 (lower is better) Translates to: LGVKNCKRVWVTVKECGMSTFEG*GKESKI Trigger: AATCTTGCTTTCTTTCCCTCACCCCTCAAAGGTGCT...CATCCCACACTCCTTTACAGTTACCCACACTCTTTTGCAGTTCTTTACTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTTTTGAATTTAAAGGAGAGGTACATTATATGGCCTGCTTCCCAATCCCCGAACGAGGCAAACTGTaGAGCCACAGCTCAAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: LCFEFKGEVHYMACFPIPERGKL*SHSSRV Trigger: TACCCTTGAGCTGTGGCTCCACAGTTTGCCTCGTTC...GGGGATTGGGAAGCAGGCCATATAATGTACCTCTCCTTTAAATTCAAAACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTTTACTTGTAATCCCAGCACTGGAGGAGGTAGGACTTGGCTACATATTGCTTGGAGTAAAGAACTaGAAAAGAGTGTGGGTAACT | + |
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Preference number: 2 (lower is better) Translates to: WLLLVIPALEEVGLGYILLGVKN*KRVWVT Trigger: AGTTACCCACACTCTTTTGCAGTTCTTTACTCCAAG...CAATATGTAGCCAAGTCCTACCTCCTCCAGTGCTGGGATTACAAGTAAAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | ACGGGGAATAAGGAAGACTATACATATCTAACAGGGAAGAGGAAATGGGAGGGAATGGTACCAATCACCTaGGTAATCAACTGGTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: TGNKEDYTYLTGKRKWEGMVPIT*VINWLK Trigger: CTTCAACCAGTTGATTACCCAGGTGATTGGTACCAT...TCCCTCCCATTTCCTCTTCCCTGTTAGATATGTATAGTCTTCCTTATTCCCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTTTTGAATTTAAAGGAGAGGTACATTATATGGCCTGCTTCCCAATCCCCAACTGCAAAAGAGTGTaGGTAACTGTAAAGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LCFEFKGEVHYMACFPIPNCKRV*VTVKEC Trigger: ACACTCCTTTACAGTTACCCACACTCTTTTGCAGTT...GGGGATTGGGAAGCAGGCCATATAATGTACCTCTCCTTTAAATTCAAAACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR CAA 90 bp | CAGAAAGACAAGGGTTCAATGGAAGCCTCACCTACACAATTATGTTaGAGACCAGAATGGGCCACATTAAGAAAATCTCTAAAGCTATTA | + |
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Preference number: 2 (lower is better) Translates to: QKDKGSMEASPTQLC*RPEWATLRKSLKLL Trigger: TAATAGCTTTAGAGATTTTCTTAATGTGGCCCATTCTGGTCTCAAACATAATTGTGTAGGTGAGGCTTCCATTGAACCCTTGTCTTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR GCA 72 bp | GGACCTGAACCCTGGTTCTCACGGTGCCAAAGCAAGTaGTTTCAACAACCCCTGAGCGCCCAAGGCTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: GPEPWFSRCQSK*FQQPLSAQGSH Trigger: GTGGGAGCCTTGGGCGCTCAGGGGTTGTTGAAAGCACTTGCTTTGGCACCGTGAGAACCAGGGTTCAGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR TCA 72 bp | CAGAGTTGTCTTAAGACCATATGGGTGGCCTGGCAGTaGTGGCACACACCCTTAAGCCCAGCACCAGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: QSCLKTIWVAWQ*WHTPLSPAPGR Trigger: CCTCCCTGGTGCTGGGCTTAAGGGTGTGTGCCATCACTGCCAGGCCACCCATATGGTCTTAAGACAACTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| 3UTR CCA 72 bp | GGGTGGGGATTCGGGGAGGCTGGAGAGATAGTTCAGTaGTTCTCCTCTACAGGACCTGGGTTCAATTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: GWGFGEAGEIVQ*FSSTGPGFNSL Trigger: CAGGGAATTGAACCCAGGTCCTGTAGAGGAGAACCACTGAACTATCTCTCCAGCCTCCCCGAATCCCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| 3UTR-3UTR CAA 90 bp | GAGTTAGAGGGCAGCCTCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACGTGGGGCCAGCACCTTaGAGGGGTGAGGGAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ELEGSLVYRANSGQPRLHVGPAP*RGEGKK Trigger: TTTCTTTCCCTCACCCCTCAAAGGTGCTGGCCCCAC...GTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGAGGCTGCCCTCTAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGAAGCAAGCAGCACATGAGAGGACCCGGGTTCATGTACAGCACACACAAGGTGGGGCCAGCACCTTaGAGGGGTGAGGGAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ARSKQHMRGPGFMYSTHKVGPAP*RGEGKK Trigger: TTTCTTTCCCTCACCCCTCAAAGGTGCTGGCCCCAC...CTTGTGTGTGCTGTACATGAACCCGGGTCCTCTCATGTGCTGCTTGCTTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTAGAGGGCAGCCTCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACGCAGGCAGGCATGCTTaGGCAATGAGGCCCCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ELEGSLVYRANSGQPRLHAGRHA*AMRPLK Trigger: CTTTAGGGGCCTCATTGCCAAAGCATGCCTGCCTGC...GTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGAGGCTGCCCTCTAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACACACACAGTGGGGCCAGCACCTTaGAGGGGTGAGGGAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ACFPIPLTHTHTHTHTHTVGPAP*RGEGKK Trigger: TTTCTTTCCCTCACCCCTCAAAGGTGCTGGCCCCAC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| 3UTR GCA 72 bp | ACTATCCGGCTATGGTATATAGCTCGGATGGTAAAGTaGTTGCCCAGCATGGGCCAGTCTCTGGGCTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: TIRLWYIARMVK*LPSMGQSLGSV Trigger: GACTGAGCCCAGAGACTGGCCCATGCTGGGCAAGCACTTTACCATCCGAGCTATATACCATAGCCGGATAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| 3UTR CCA 72 bp | CTCTACAGGACCTGGGTTCAATTCCCTGTACCCACATaGCAGCTCACAACTGTCTGTAACTCCCGTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LYRTWVQFPVPT*QLTTVCNSRSR Trigger: CCTGGAACGGGAGTTACAGACAGTTGTGAGCTGCCATGTGGGTACAGGGAATTGAACCCAGGTCCTGTAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGATGGTAAAGTGCTTGCCCAGCATGGGCCAGTCTCTGGGCTCAGTCCCCAAACCTACACAATTATGTTaGAGACCAGAATGGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: RMVKCLPSMGQSLGSVPKPTQLC*RPEWAT Trigger: TGTGGCCCATTCTGGTCTCAAACATAATTGTGTAGG...TTTGGGGACTGAGCCCAGAGACTGGCCCATGCTGGGCAAGCACTTTACCATCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| 3UTR TCA 72 bp | TGTAAAGGAGTGTGGGATGTGTGGGGCCAGCACCTTTaGGGGGTGAGGGAAAGAAAGCAAGATTTCTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CKGVWDVWGQHL*GVRERKQDFLG Trigger: CCCTAAGAAATCTTGCTTTCTTTCCCTCACCCCTCAAAGGTGCTGGCCCCACACATCCCACACTCCTTTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| 3UTR TCA 72 bp | AAAAAGAACATTATGGATGTGAGGGGTGGGAAAGGGTaGCTGACAGCAGGAGCTACAGGAACCCAAAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KKNIMDVRGGKG*LTAGATGTQSS Trigger: GGAGCTTTGGGTTCCTGTAGCTCCTGCTGTCAGTCACCCTTTCCCACCCCTCACATCCATAATGTTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| 3UTR CCA 72 bp | GAAAACAGGATGGTACCAATCACCTGGGTAATCAACTaGTTGAAGAGGCTGCAAGGAGAGATGGGGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ENRMVPITWVIN*LKRLQGEMGKG Trigger: TCCCTTCCCCATCTCTCCTTGCAGCCTCTTCAACCAGTTGATTACCCAGGTGATTGGTACCATCCTGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| 3UTR CCA 72 bp | AAAGAGACCCTTGGAGTAAAGAACTGCAAAAGAGTGTaGGTAACTGTAAAGGAGTGTGGGATGTGTGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KETLGVKNCKRV*VTVKECGMCGA Trigger: GGCCCCACACATCCCACACTCCTTTACAGTTACCCACACTCTTTTGCAGTTCTTTACTCCAAGGGTCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGTTTTGAATTTAAAGGAGAGGTACATTATATGGCCTGCTTCCCAATCCCCGTGGGGCCAGCACCTTaGAGGGGTGAGGGAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LCFEFKGEVHYMACFPIPVGPAP*RGEGKK Trigger: TTTCTTTCCCTCACCCCTCAAAGGTGCTGGCCCCAC...GGGGATTGGGAAGCAGGCCATATAATGTACCTCTCCTTTAAATTCAAAACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| 3UTR-3UTR CAA 90 bp | TATGGTGGTATATCTGTACTCTCAGCACCCAGAAGGTGGAGCCAGAAAGACAAGCCTACACAATTATGTTaGAGACCAGAATGGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: YGGISVLSAPRRWSQKDKPTQLC*RPEWAT Trigger: TGTGGCCCATTCTGGTCTCAAACATAATTGTGTAGG...CTTGTCTTTCTGGCTCCACCTTCTGGGTGCTGAGAGTACAGATATACCACCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| 3UTR GCA 72 bp | AATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGAACTaGAAAAGAGTGTGGGTAACTGTAAAGGAGTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: NEAPKETLGVKN*KRVWVTVKECG Trigger: CCCACACTCCTTTACAGTTACCCACACTCTTTTGCAGTTCTTTACTCCAAGGGTCTCTTTAGGGGCCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| 3UTR CCA 72 bp | TTTACTTGTAATCCCAGCACTGGAGGAGGTAGGACTTaGCTACATATTGAGTTTGAGGCCAGCCTTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: FTCNPSTGGGRT*LHIEFEASLVY Trigger: GTAGACAAGGCTGGCCTCAAACTCAATATGTAGCCAAGTCCTACCTCCTCCAGTGCTGGGATTACAAGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| 3UTR CCA 72 bp | TATGTTCCTGTGAGTGTAGTCGTGGAGGCCAGAAAATaGCACCATCTGTCATTTCCTTCACTGCGTATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: YVPVSVVVEARK*HHLSFPSLRIC Trigger: ACAAATACGCAGTGAAGGAAATGACAGATGGTGCCATTTTCTGGCCTCCACGACTACACTCACAGGAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| 3UTR GCA 72 bp | TGTTTTGAATTTAAAGGAGAGGTACATTATATGGCCTaGTTCCCAATCCCCTTAACACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: CFEFKGEVHYMA*FPIPLTHTHTH Trigger: GTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGCCATATAATGTACCTCTCCTTTAAATTCAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | ATCACCTGGGTAATCAACTGGTTGAAGAGGCTGCAAGGAGAGATGGGGAAGGGAAGGAGGCCCAGCGGCTaGGTCAGCGCCCGAGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ITWVINWLKRLQGEMGKGRRPSG*VSARAD Trigger: GTCCGCTCGGGCGCTGACCCAGCCGCTGGGCCTCCT...TCCCTTCCCCATCTCTCCTTGCAGCCTCTTCAACCAGTTGATTACCCAGGTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | AATCCCAGCACTGGAGGAGGTAGGACTTGGCTACATATTGAGTTTGAGGCCAGCAGGAGGCCCAGCGGCTaGGTCAGCGCCCGAGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NPSTGGGRTWLHIEFEASRRPSG*VSARAD Trigger: GTCCGCTCGGGCGCTGACCCAGCCGCTGGGCCTCCT...GCTGGCCTCAAACTCAATATGTAGCCAAGTCCTACCTCCTCCAGTGCTGGGATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACACACACACACAGACTAAGGCACAGGAGGCCCAGCGGCTaGGTCAGCGCCCGAGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTHRLRHRRPSG*VSARAD Trigger: GTCCGCTCGGGCGCTGACCCAGCCGCTGGGCCTCCT...GTGCCTTAGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | AGCTCGGATGGTAAAGTGCTTGCCCAGCATGGGCCAGTCTCTGGGCTCAGTCCCGGGGCCAGAGGACGATaGCAGTGGCGTAAAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSDGKVLAQHGPVSGLSPGARGR*QWRKRE Trigger: TTCTCTTTTACGCCACTGCCATCGTCCTCTGGCCCC...GGGACTGAGCCCAGAGACTGGCCCATGCTGGGCAAGCACTTTACCATCCGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | TCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACAGAGAAACCCTGGGGGTGGCCCAGTTACCCATaGGCCCTGTCCAGGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTEQIQDSQGYTEKPWGWPSYP*ALSRHP Trigger: TGGGTGCCTGGACAGGGCCCATGGGTAACTGGGCCA...CCCCCAGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GAGTTAGAGGGCAGCCTCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACTGGCCCAGTTACCCATaGGCCCTGTCCAGGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELEGSLVYRANSGQPRLHWPSYP*ALSRHP Trigger: TGGGTGCCTGGACAGGGCCCATGGGTAACTGGGCCA...GTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGAGGCTGCCCTCTAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | TGGAGTAAAGAACTGCAAAAGAGTGTGGGTAACTGTAAAGGAGTGTGGGATGTGAGGAGGCCCAGCGGCTaGGTCAGCGCCCGAGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WSKELQKSVGNCKGVWDVRRPSG*VSARAD Trigger: GTCCGCTCGGGCGCTGACCCAGCCGCTGGGCCTCCT...CACATCCCACACTCCTTTACAGTTACCCACACTCTTTTGCAGTTCTTTACTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | TGCAAAAGAGTGTGGGTAACTGTAAAGGAGTGTGGGATGTGTGGGGCCAGCACCTCCAGGCACCCACACTaGCCACCAGCGAGAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CKRVWVTVKECGMCGASTSRHPH*PPARKP Trigger: TGGCTTTCTCGCTGGTGGCCAGTGTGGGTGCCTGGA...GGTGCTGGCCCCACACATCCCACACTCCTTTACAGTTACCCACACTCTTTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCAGGCATGCTTTGGCAATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGAGGGGGAAGTGGGCCTaGAGTCCACCTAACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GRQACFGNEAPKETLGVKRGKWA*SPPNST Trigger: TGTGGAGTTAGGTGGACTCCAGGCCCACTTCCCCCT...CTTTACTCCAAGGGTCTCTTTAGGGGCCTCATTGCCAAAGCATGCCTGCCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGAAGCAAGCAGCACATGAGAGGACCCGGGTTCATGTACAGCACACACAAGCGCAGGAGAAAGTGGTaGCAGCGATGGCATGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARSKQHMRGPGFMYSTHKRRRKW*QRWHGP Trigger: GGGACCATGCCATCGCTGCCACCACTTTCTCCTGCG...CTTGTGTGTGCTGTACATGAACCCGGGTCCTCTCATGTGCTGCTTGCTTCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | TCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACAGAGAAACCCTGGGGGCGCAGGAGAAAGTGGTaGCAGCGATGGCATGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSTEQIQDSQGYTEKPWGRRRKW*QRWHGP Trigger: GGGACCATGCCATCGCTGCCACCACTTTCTCCTGCG...CCCCCAGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| 3UTR CAA 72 bp | ATCCGGCTATGGTATATAGCTCGGATGGTAAAGTGCTaGCCCAGCATGGGCCAGTCTCTGGGCTCAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRLWYIARMVKC*PSMGQSLGSVP Trigger: GGGGACTGAGCCCAGAGACTGGCCCATGCTGGGCAAGCACTTTACCATCCGAGCTATATACCATAGCCGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACACACACACAGACTAAGGCACGATCTCACCGGGCCTTaGACGGGTCCAGGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTHRLRHDLTGP*TGPGHF Trigger: GAAGTGGCCTGGACCCGTGCAAGGCCCGGTGAGATC...GTGCCTTAGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACACACACATCCAGGCACCCACACTaGCCACCAGCGAGAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ACFPIPLTHTHTHTHTHTSRHPH*PPARKP Trigger: TGGCTTTCTCGCTGGTGGCCAGTGTGGGTGCCTGGA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCAGGCATGCTTTGGCAATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGAGCCTGAGAGGAAGGTaGGGAAAGGGATGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GRQACFGNEAPKETLGVKSLRGR*GKGWAT Trigger: TGTTGCCCATCCCTTTCCCCACCTTCCTCTCAGGCT...CTTTACTCCAAGGGTCTCTTTAGGGGCCTCATTGCCAAAGCATGCCTGCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | TTATATGGCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACGGGGAAGTTTCGCCATaGCAGGGGGAAGTGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYGLLPNPLNTHTHTHTHGEVSP*QGEVGL Trigger: CAGGCCCACTTCCCCCTGTCATGGCGAAACTTCCCC...GTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGCCATATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | GAGTTAGAGGGCAGCCTCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACCGTAGCAGGCAAAGGTaGTGGGGAAGTTTCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ELEGSLVYRANSGQPRLHRSRQR*WGSFAM Trigger: CATGGCGAAACTTCCCCATCACCTTTGCCTGCTACG...GTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGAGGCTGCCCTCTAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | GCAAGAAGCAAGCAGCACATGAGAGGACCCGGGTTCATGTACAGCACACACAAGTCCAGGGCTGGCTTCTaGTTATACAGGAGCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ARSKQHMRGPGFMYSTHKSRAGF*LYRSGS Trigger: TGAGCCGCTCCTGTATAATCAGAAGCCAGCCCTGGA...CTTGTGTGTGCTGTACATGAACCCGGGTCCTCTCATGTGCTGCTTGCTTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | ATCACCTGGGTAATCAACTGGTTGAAGAGGCTGCAAGGAGAGATGGGGAAGGGATACAATCCCCCAGGTTaGGCAGGATGGTCACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITWVINWLKRLQGEMGKGYNPPG*AGWSPL Trigger: CAGGGGTGACCATCCTGCTCAACCTGGGGGATTGTA...TCCCTTCCCCATCTCTCCTTGCAGCCTCTTCAACCAGTTGATTACCCAGGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR GCA 90 bp | GCATGCTTTGGCAATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGAACTGCAAAGATCTCACCGGGCCTTaGACGGGTCCAGGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACFGNEAPKETLGVKNCKDLTGP*TGPGHF Trigger: GAAGTGGCCTGGACCCGTGCAAGGCCCGGTGAGATC...TTTGCAGTTCTTTACTCCAAGGGTCTCTTTAGGGGCCTCATTGCCAAAGCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACACACACAAGGGGGAAGTGGGCCTaGAGTCCACCTAACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ACFPIPLTHTHTHTHTHTRGKWA*SPPNST Trigger: TGTGGAGTTAGGTGGACTCCAGGCCCACTTCCCCCT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGTATTGCTAGGGACAGGCCTGCCAGGGCCTTTGTACATGCTAAGCAAGTAAGGGGGAAGTGGGCCTaGAGTCCACCTAACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VCIARDRPARAFVHAKQVRGKWA*SPPNST Trigger: TGTGGAGTTAGGTGGACTCCAGGCCCACTTCCCCCT...TACTTGCTTAGCATGTACAAAGGCCCTGGCAGGCCTGTCCCTAGCAATACACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCAGGCATGCTTTGGCAATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGTCCAGGCCACTTCAGTaGCATACGCCAAACAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRQACFGNEAPKETLGVKSRPLQ*HTPNRQ Trigger: TTGCCTGTTTGGCGTATGCCACTGAAGTGGCCTGGA...CTTTACTCCAAGGGTCTCTTTAGGGGCCTCATTGCCAAAGCATGCCTGCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCAGGCATGCTTTGGCAATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGAACTTTGAGCAGCCCTaGCACGGTAGCCATATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRQACFGNEAPKETLGVKNFEQP*HGSHIA Trigger: GGCTATATGGCTACCGTGCCAGGGCTGCTCAAAGTT...CTTTACTCCAAGGGTCTCTTTAGGGGCCTCATTGCCAAAGCATGCCTGCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GAGTTAGAGGGCAGCCTCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACGGGGCCAGAGGACGATaGCAGTGGCGTAAAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELEGSLVYRANSGQPRLHGARGR*QWRKRE Trigger: TTCTCTTTTACGCCACTGCCATCGTCCTCTGGCCCC...GTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGAGGCTGCCCTCTAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | GTACCAATCACCTGGGTAATCAACTGGTTGAAGAGGCTGCAAGGAGAGATGGGGTCCAGGGCTGGCTTCTaGTTATACAGGAGCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPITWVINWLKRLQGEMGSRAGF*LYRSGS Trigger: TGAGCCGCTCCTGTATAATCAGAAGCCAGCCCTGGA...CCCCATCTCTCCTTGCAGCCTCTTCAACCAGTTGATTACCCAGGTGATTGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR GCA 90 bp | TGGAGCCACAGCTCAAGGGTAAAACAGGCATACCAGAAGAGGAAAGGTAAGAAAGATCTCACCGGGCCTTaGACGGGTCCAGGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: WSHSSRVKQAYQKRKGKKDLTGP*TGPGHF Trigger: GAAGTGGCCTGGACCCGTGCAAGGCCCGGTGAGATC...TTTCTTACCTTTCCTCTTCTGGTATGCCTGTTTTACCCTTGAGCTGTGGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GCATGCTTTGGCAATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGAACTGCAAATCCAGGCACCCACACTaGCCACCAGCGAGAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ACFGNEAPKETLGVKNCKSRHPH*PPARKP Trigger: TGGCTTTCTCGCTGGTGGCCAGTGTGGGTGCCTGGA...TTTGCAGTTCTTTACTCCAAGGGTCTCTTTAGGGGCCTCATTGCCAAAGCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GACTTCTGGCCACCGGGAATTGCTGACCTCCAGGATTTTGTTTGCTTTGTTTTGTCCAGGCACCCACACTaGCCACCAGCGAGAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DFWPPGIADLQDFVCFVLSRHPH*PPARKP Trigger: TGGCTTTCTCGCTGGTGGCCAGTGTGGGTGCCTGGA...CAAAACAAAGCAAACAAAATCCTGGAGGTCAGCAATTCCCGGTGGCCAGAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | CTCTTTAACGGGGCTACACAACGAGGGTATGGTGGTATATCTGTACTCTCAGCACGCAGGAGAAAGTGGTaGCAGCGATGGCATGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFNGATQRGYGGISVLSARRRKW*QRWHGP Trigger: GGGACCATGCCATCGCTGCCACCACTTTCTCCTGCG...TGCTGAGAGTACAGATATACCACCATACCCTCGTTGTGTAGCCCCGTTAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | TCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACAGAGAAACCCTGGGGGTCCAGGCCACTTCAGTaGCATACGCCAAACAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTEQIQDSQGYTEKPWGSRPLQ*HTPNRQ Trigger: TTGCCTGTTTGGCGTATGCCACTGAAGTGGCCTGGA...CCCCCAGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | AACGAGGGTATGGTGGTATATCTGTACTCTCAGCACCCAGAAGGTGGAGCCAGAAGCCTGAGAGGAAGGTaGGGAAAGGGATGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: NEGMVVYLYSQHPEGGARSLRGR*GKGWAT Trigger: TGTTGCCCATCCCTTTCCCCACCTTCCTCTCAGGCT...TCTGGCTCCACCTTCTGGGTGCTGAGAGTACAGATATACCACCATACCCTCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACACACACAAGCCTGAGAGGAAGGTaGGGAAAGGGATGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ACFPIPLTHTHTHTHTHTSLRGR*GKGWAT Trigger: TGTTGCCCATCCCTTTCCCCACCTTCCTCTCAGGCT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GTACCAATCACCTGGGTAATCAACTGGTTGAAGAGGCTGCAAGGAGAGATGGGGGGGGCCAGAGGACGATaGCAGTGGCGTAAAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPITWVINWLKRLQGEMGGARGR*QWRKRE Trigger: TTCTCTTTTACGCCACTGCCATCGTCCTCTGGCCCC...CCCCATCTCTCCTTGCAGCCTCTTCAACCAGTTGATTACCCAGGTGATTGGTAC 53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| 3UTR CAA 72 bp | GTCATCAAACTGAAGAATCTGAGTCTCACCTCTCTCTaGGAGTCCTTCATTCCTCCCCACCCACCCGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VIKLKNLSLTSL*ESFIPPHPPGE Trigger: CTCTCCGGGTGGGTGGGGAGGAATGAAGGACTCCAAGAGAGAGGTGAGACTCAGATTCTTCAGTTTGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | ATCACCTGGGTAATCAACTGGTTGAAGAGGCTGCAAGGAGAGATGGGGAAGGGAAGCAGAAACACCAGGTaGACATGGCCCAGTTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITWVINWLKRLQGEMGKGSRNTR*TWPSYP Trigger: TGGGTAACTGGGCCATGTTCACCTGGTGTTTCTGCT...TCCCTTCCCCATCTCTCCTTGCAGCCTCTTCAACCAGTTGATTACCCAGGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | GGTACCAATCACCTGGGTAATCAACTGGTTGAAGAGGCTGCAAGGAGAGATGGGAGCAGAAACACCAGGTaGACATGGCCCAGTTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTNHLGNQLVEEAARRDGSRNTR*TWPSYP Trigger: TGGGTAACTGGGCCATGTTCACCTGGTGTTTCTGCT...CCCATCTCTCCTTGCAGCCTCTTCAACCAGTTGATTACCCAGGTGATTGGTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACACACACACAGACTAAGGCACTCCAGGGCTGGCTTCTaGTTATACAGGAGCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTHRLRHSRAGF*LYRSGS Trigger: TGAGCCGCTCCTGTATAATCAGAAGCCAGCCCTGGA...GTGCCTTAGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTTAACGGGGCTACACAACGAGGGTATGGTGGTATATCTGTACTCTCAGCAGCAGATGGCATAGACTaGCACACACCACTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFNGATQRGYGGISVLSAADGID*HTPLQG Trigger: GCCCTGGAGTGGTGTGTGGCAGTCTATGCCATCTGC...TGCTGAGAGTACAGATATACCACCATACCCTCGTTGTGTAGCCCCGTTAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGAAGCAAGCAGCACATGAGAGGACCCGGGTTCATGTACAGCACACACAAGAGAAAGCCACACAGGTaGATATTAGCTGCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARSKQHMRGPGFMYSTHKRKPHR*ILAAGG Trigger: GCCTCCTGCAGCTAATATCCACCTGTGTGGCTTTCT...CTTGTGTGTGCTGTACATGAACCCGGGTCCTCTCATGTGCTGCTTGCTTCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | ACGGGGAATAAGGAAGACTATACATATCTAACAGGGAAGAGGAAATGGGAGGGATGGCCCAGTTACCCATaGGCCCTGTCCAGGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGNKEDYTYLTGKRKWEGWPSYP*ALSRHP Trigger: TGGGTGCCTGGACAGGGCCCATGGGTAACTGGGCCA...TCCCTCCCATTTCCTCTTCCCTGTTAGATATGTATAGTCTTCCTTATTCCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CCA 90 bp | TGGAGCCACAGCTCAAGGGTAAAACAGGCATACCAGAAGAGGAAAGGTAAGAAACGCAGGAGAAAGTGGTaGCAGCGATGGCATGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WSHSSRVKQAYQKRKGKKRRRKW*QRWHGP Trigger: GGGACCATGCCATCGCTGCCACCACTTTCTCCTGCG...TTTCTTACCTTTCCTCTTCTGGTATGCCTGTTTTACCCTTGAGCTGTGGCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACACACACATCCAGGCCACTTCAGTaGCATACGCCAAACAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ACFPIPLTHTHTHTHTHTSRPLQ*HTPNRQ Trigger: TTGCCTGTTTGGCGTATGCCACTGAAGTGGCCTGGA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | AGCACTGGAGGAGGTAGGACTTGGCTACATATTGAGTTTGAGGCCAGCCTTGTCAACTTTGAGCAGCCCTaGCACGGTAGCCATATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: STGGGRTWLHIEFEASLVNFEQP*HGSHIA Trigger: GGCTATATGGCTACCGTGCCAGGGCTGCTCAAAGTT...GACAAGGCTGGCCTCAAACTCAATATGTAGCCAAGTCCTACCTCCTCCAGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACACACACACACAGACTAAGGCACGGGGCCAGAGGACGATaGCAGTGGCGTAAAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTHRLRHGARGR*QWRKRE Trigger: TTCTCTTTTACGCCACTGCCATCGTCCTCTGGCCCC...GTGCCTTAGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR TCA 90 bp | CTCTTTAACGGGGCTACACAACGAGGGTATGGTGGTATATCTGTACTCTCAGCACGTAGCAGGCAAAGGTaGTGGGGAAGTTTCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LFNGATQRGYGGISVLSARSRQR*WGSFAM Trigger: CATGGCGAAACTTCCCCATCACCTTTGCCTGCTACG...TGCTGAGAGTACAGATATACCACCATACCCTCGTTGTGTAGCCCCGTTAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| CDS-3UTR TCA 90 bp | GTAAAGAACTGCAAAAGAGTGTGGGTAACTGTAAAGGAGTGTGGGATGTGTGGGTACAATCCCCCAGGTTaGGCAGGATGGTCACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKNCKRVWVTVKECGMCGYNPPG*AGWSPL Trigger: CAGGGGTGACCATCCTGCTCAACCTGGGGGATTGTA...CCCACACATCCCACACTCCTTTACAGTTACCCACACTCTTTTGCAGTTCTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACACACACACACAGACTAAGGCACAACTTTGAGCAGCCCTaGCACGGTAGCCATATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTHRLRHNFEQP*HGSHIA Trigger: GGCTATATGGCTACCGTGCCAGGGCTGCTCAAAGTT...GTGCCTTAGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CCA 90 bp | GGTACCAATCACCTGGGTAATCAACTGGTTGAAGAGGCTGCAAGGAGAGATGGGAGGTGGGGAAAGGGATaGGCAACACGTTGGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTNHLGNQLVEEAARRDGRWGKG*ATRWYN Trigger: ATTGTACCAACGTGTTGCCCATCCCTTTCCCCACCT...CCCATCTCTCCTTGCAGCCTCTTCAACCAGTTGATTACCCAGGTGATTGGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CCA 90 bp | GACTTCTGGCCACCGGGAATTGCTGACCTCCAGGATTTTGTTTGCTTTGTTTTGAGCCTGAGAGGAAGGTaGGGAAAGGGATGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: DFWPPGIADLQDFVCFVLSLRGR*GKGWAT Trigger: TGTTGCCCATCCCTTTCCCCACCTTCCTCTCAGGCT...CAAAACAAAGCAAACAAAATCCTGGAGGTCAGCAATTCCCGGTGGCCAGAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | GACTTCTGGCCACCGGGAATTGCTGACCTCCAGGATTTTGTTTGCTTTGTTTTGAGCAGAAACACCAGGTaGACATGGCCCAGTTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: DFWPPGIADLQDFVCFVLSRNTR*TWPSYP Trigger: TGGGTAACTGGGCCATGTTCACCTGGTGTTTCTGCT...CAAAACAAAGCAAACAAAATCCTGGAGGTCAGCAATTCCCGGTGGCCAGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| CDS-3UTR TCA 90 bp | GTAAAGAACTGCAAAAGAGTGTGGGTAACTGTAAAGGAGTGTGGGATGTGTGGGCGTAGCAGGCAAAGGTaGTGGGGAAGTTTCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VKNCKRVWVTVKECGMCGRSRQR*WGSFAM Trigger: CATGGCGAAACTTCCCCATCACCTTTGCCTGCTACG...CCCACACATCCCACACTCCTTTACAGTTACCCACACTCTTTTGCAGTTCTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR TCA 90 bp | TGGAGCCACAGCTCAAGGGTAAAACAGGCATACCAGAAGAGGAAAGGTAAGAAATCCAGGGCTGGCTTCTaGTTATACAGGAGCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WSHSSRVKQAYQKRKGKKSRAGF*LYRSGS Trigger: TGAGCCGCTCCTGTATAATCAGAAGCCAGCCCTGGA...TTTCTTACCTTTCCTCTTCTGGTATGCCTGTTTTACCCTTGAGCTGTGGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | ACGGGGAATAAGGAAGACTATACATATCTAACAGGGAAGAGGAAATGGGAGGGATACAATCCCCCAGGTTaGGCAGGATGGTCACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGNKEDYTYLTGKRKWEGYNPPG*AGWSPL Trigger: CAGGGGTGACCATCCTGCTCAACCTGGGGGATTGTA...TCCCTCCCATTTCCTCTTCCCTGTTAGATATGTATAGTCTTCCTTATTCCCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGTAAAGAACTGCAAAAGAGTGTGGGTAACTGTAAAGGAGTGTGGGATGGCAGATGGCATAGACTaGCACACACCACTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGVKNCKRVWVTVKECGMADGID*HTPLQG Trigger: GCCCTGGAGTGGTGTGTGGCAGTCTATGCCATCTGC...CATCCCACACTCCTTTACAGTTACCCACACTCTTTTGCAGTTCTTTACTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | TATGGTGGTATATCTGTACTCTCAGCACCCAGAAGGTGGAGCCAGAAAGACAAGTCCAGGCCACTTCAGTaGCATACGCCAAACAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YGGISVLSAPRRWSQKDKSRPLQ*HTPNRQ Trigger: TTGCCTGTTTGGCGTATGCCACTGAAGTGGCCTGGA...CTTGTCTTTCTGGCTCCACCTTCTGGGTGCTGAGAGTACAGATATACCACCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GCATGCTTTGGCAATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGAACTGCAAAAACTTTGAGCAGCCCTaGCACGGTAGCCATATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ACFGNEAPKETLGVKNCKNFEQP*HGSHIA Trigger: GGCTATATGGCTACCGTGCCAGGGCTGCTCAAAGTT...TTTGCAGTTCTTTACTCCAAGGGTCTCTTTAGGGGCCTCATTGCCAAAGCATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| 3UTR CAA 72 bp | CTGTGTGTATTGCTAGGGACAGGCCTGCCAGGGCCTTaGTACATGCTAAGCAAGTACTTTCCCTCTAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LCVLLGTGLPGP*YMLSKYFPSKL Trigger: TAGCTTAGAGGGAAAGTACTTGCTTAGCATGTACAAAGGCCCTGGCAGGCCTGTCCCTAGCAATACACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| 3UTR CAA 72 bp | TGCCCAAGTGGTATTTTCTTCCTGAATCTGTGTGTATaGCTAGGGACAGGCCTGCCAGGGCCTTTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: CPSGIFFLNLCV*LGTGLPGPLYM Trigger: CATGTACAAAGGCCCTGGCAGGCCTGTCCCTAGCAATACACACAGATTCAGGAAGAAAATACCACTTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | TGGAGTAAAGAACTGCAAAAGAGTGTGGGTAACTGTAAAGGAGTGTGGGATGTGCGTAGCAGGCAAAGGTaGTGGGGAAGTTTCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: WSKELQKSVGNCKGVWDVRSRQR*WGSFAM Trigger: CATGGCGAAACTTCCCCATCACCTTTGCCTGCTACG...CACATCCCACACTCCTTTACAGTTACCCACACTCTTTTGCAGTTCTTTACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | GACTTCTGGCCACCGGGAATTGCTGACCTCCAGGATTTTGTTTGCTTTGTTTTGAGGTGGGGAAAGGGATaGGCAACACGTTGGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: DFWPPGIADLQDFVCFVLRWGKG*ATRWYN Trigger: ATTGTACCAACGTGTTGCCCATCCCTTTCCCCACCT...CAAAACAAAGCAAACAAAATCCTGGAGGTCAGCAATTCCCGGTGGCCAGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | CAAACTGAAGAATCTGAGTCTCACCTCTCTCTTGGAGTCCTTCATTCCTCCCCAAGGTGGGGAAAGGGATaGGCAACACGTTGGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: QTEESESHLSLGVLHSSPRWGKG*ATRWYN Trigger: ATTGTACCAACGTGTTGCCCATCCCTTTCCCCACCT...TGGGGAGGAATGAAGGACTCCAAGAGAGAGGTGAGACTCAGATTCTTCAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
||
| CDS-3UTR CCA 90 bp | CTTTGTTTTGAATTTAAAGGAGAGGTACATTATATGGCCTGCTTCCCAATCCCCAGGGGGAAGTGGGCCTaGAGTCCACCTAACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LCFEFKGEVHYMACFPIPRGKWA*SPPNST Trigger: TGTGGAGTTAGGTGGACTCCAGGCCCACTTCCCCCT...GGGGATTGGGAAGCAGGCCATATAATGTACCTCTCCTTTAAATTCAAAACAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTTAACGGGGCTACACAACGAGGGTATGGTGGTATATCTGTACTCTCAGCACAGATCAGACACATATaGCAGCAGGTTGATACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFNGATQRGYGGISVLSAQIRHI*QQVDTC Trigger: ACAGGTATCAACCTGCTGGCATATGTGTCTGATCTG...TGCTGAGAGTACAGATATACCACCATACCCTCGTTGTGTAGCCCCGTTAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
||
| CDS-3UTR GCA 90 bp | TTATATGGCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACCAGATCAGACACATATaGCAGCAGGTTGATACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LYGLLPNPLNTHTHTHTHQIRHI*QQVDTC Trigger: ACAGGTATCAACCTGCTGGCATATGTGTCTGATCTG...GTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGCCATATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR TCA 90 bp | CTTTGTTTTGAATTTAAAGGAGAGGTACATTATATGGCCTGCTTCCCAATCCCCAGCAGAAACACCAGGTaGACATGGCCCAGTTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCFEFKGEVHYMACFPIPSRNTR*TWPSYP Trigger: TGGGTAACTGGGCCATGTTCACCTGGTGTTTCTGCT...GGGGATTGGGAAGCAGGCCATATAATGTACCTCTCCTTTAAATTCAAAACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
||
| CDS-3UTR GCA 90 bp | ACGGGGAATAAGGAAGACTATACATATCTAACAGGGAAGAGGAAATGGGAGGGACAGATCAGACACATATaGCAGCAGGTTGATACCTGT | + |
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Preference number: 4 (lower is better) Translates to: TGNKEDYTYLTGKRKWEGQIRHI*QQVDTC Trigger: ACAGGTATCAACCTGCTGGCATATGTGTCTGATCTG...TCCCTCCCATTTCCTCTTCCCTGTTAGATATGTATAGTCTTCCTTATTCCCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CCA 90 bp | CTTTGTTTTGAATTTAAAGGAGAGGTACATTATATGGCCTGCTTCCCAATCCCCAGGTGGGGAAAGGGATaGGCAACACGTTGGTACAAT | + |
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Preference number: 4 (lower is better) Translates to: LCFEFKGEVHYMACFPIPRWGKG*ATRWYN Trigger: ATTGTACCAACGTGTTGCCCATCCCTTTCCCCACCT...GGGGATTGGGAAGCAGGCCATATAATGTACCTCTCCTTTAAATTCAAAACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| 3UTR CAA 72 bp | ACTTTCCCTCTAAGCTACTTGCCAAACCATAGTGCCTaGTGTTTCTCAAGGGACTTTCTGTGGGAGAAATTG | + |
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Preference number: 4 (lower is better) Translates to: TFPLSYLPNHSA*CFSRDFLWEKL Trigger: CAATTTCTCCCACAGAAAGTCCCTTGAGAAACACAAGGCACTATGGTTTGGCAAGTAGCTTAGAGGGAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203566.3 |
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| CDS GCA 90 bp | CAGCCCTGGCACGGTAGCCATATAGCCAGTGATCTCACCGGGCCTTaGACGGGTCCAGGCCACTTCAGTGGCATACGCCAAACAGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: QPWHGSHIASDLTGP*TGPGHFSGIRQTGN Trigger: GTTGCCTGTTTGGCGTATGCCACTGAAGTGGCCTGGACCCGTGCAAGGCCCGGTGAGATCACTGGCTATATGGCTACCGTGCCAGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS CCA 90 bp | TGGCATACGCCAAACAGGCAACGCAGGAGAAAGTGGTGGCAGCGATaGCATGGTCCCGGGTACGTCCATGAGCTAGGAACTGCACATAGG | + |
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Preference number: 5 (lower is better) Translates to: WHTPNRQRRRKWWQR*HGPGYVHELGTAHR Trigger: CCTATGTGCAGTTCCTAGCTCATGGACGTACCCGGGACCATGCCATCGCTGCCACCACTTTCTCCTGCGTTGCCTGTTTGGCGTATGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS TCA 90 bp | CCAGACGAGTGGAGTACACCAGATCAGACACATATGCCAGCAGGTTaGTACCTGTCAGGATGGACACCGCCAGTCGTCGGTCCCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: PDEWSTPDQTHMPAG*YLSGWTPPVVGPRN Trigger: GTTTCTGGGACCGACGACTGGCGGTGTCCATCCTGACAGGTATCAACCTGCTGGCATATGTGTCTGATCTGGTGTACTCCACTCGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | GAGTTAGAGGGCAGCCTCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACGTACAATCCCCCAGGTaGAGCAGGATGGTCACCCCT | + |
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Preference number: 5 (lower is better) Translates to: ELEGSLVYRANSGQPRLHVQSPR*SRMVTP Trigger: AGGGGTGACCATCCTGCTCAACCTGGGGGATTGTAC...GTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGAGGCTGCCCTCTAACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | TCGTCTACAGAGCAAATTCAGGACAGCCAAGGCTACACAGAGAAACCCTGGGGGGTACAATCCCCCAGGTaGAGCAGGATGGTCACCCCT | + |
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Preference number: 5 (lower is better) Translates to: SSTEQIQDSQGYTEKPWGVQSPR*SRMVTP Trigger: AGGGGTGACCATCCTGCTCAACCTGGGGGATTGTAC...CCCCCAGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGAATTTGCTCTGTAGACGA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| CDS GCA 90 bp | CTTGACGAACACCAGACGAGTGGAGTACACCAGATCAGACACATATaGCAGCAGGTTGATACCTGTCAGGATGGACACCGCCAGTCGTCG | + |
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Preference number: 5 (lower is better) Translates to: LDEHQTSGVHQIRHI*QQVDTCQDGHRQSS Trigger: CGACGACTGGCGGTGTCCATCCTGACAGGTATCAACCTGCTGGCATATGTGTCTGATCTGGTGTACTCCACTCGTCTGGTGTTCGTCAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | ATCACCTGGGTAATCAACTGGTTGAAGAGGCTGCAAGGAGAGATGGGGAAGGGAGGGATGGGCAACACGTaGGTACAATCCCCCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: ITWVINWLKRLQGEMGKGGMGNT*VQSPRL Trigger: CAACCTGGGGGATTGTACCAACGTGTTGCCCATCCC...TCCCTTCCCCATCTCTCCTTGCAGCCTCTTCAACCAGTTGATTACCCAGGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | GGCAGGCAGGCATGCTTTGGCAATGAGGCCCCTAAAGAGACCCTTGGAGTAAAGATATCTCTGATCAAATaGGTAGAGGGGCCAGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: GRQACFGNEAPKETLGVKISLIK*VEGPED Trigger: GTCCTCTGGCCCCTCTACCAATTTGATCAGAGATAT...CTTTACTCCAAGGGTCTCTTTAGGGGCCTCATTGCCAAAGCATGCCTGCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | TGGAGCCACAGCTCAAGGGTAAAACAGGCATACCAGAAGAGGAAAGGTAAGAAAGTACAATCCCCCAGGTaGAGCAGGATGGTCACCCCT | + |
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Preference number: 5 (lower is better) Translates to: WSHSSRVKQAYQKRKGKKVQSPR*SRMVTP Trigger: AGGGGTGACCATCCTGCTCAACCTGGGGGATTGTAC...TTTCTTACCTTTCCTCTTCTGGTATGCCTGTTTTACCCTTGAGCTGTGGCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | GTAAAGAACTGCAAAAGAGTGTGGGTAACTGTAAAGGAGTGTGGGATGTGTGGGGGGATGGGCAACACGTaGGTACAATCCCCCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: VKNCKRVWVTVKECGMCGGMGNT*VQSPRL Trigger: CAACCTGGGGGATTGTACCAACGTGTTGCCCATCCC...CCCACACATCCCACACTCCTTTACAGTTACCCACACTCTTTTGCAGTTCTTTAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | ATCACCTGGGTAATCAACTGGTTGAAGAGGCTGCAAGGAGAGATGGGGAAGGGAACATATGCCAGCAGGTaGATACCTGTCAGGATGGAC | + |
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Preference number: 5 (lower is better) Translates to: ITWVINWLKRLQGEMGKGTYASR*IPVRMD Trigger: GTCCATCCTGACAGGTATCAACCTGCTGGCATATGT...TCCCTTCCCCATCTCTCCTTGCAGCCTCTTCAACCAGTTGATTACCCAGGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | GCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACACACACAATATCTCTGATCAAATaGGTAGAGGGGCCAGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: ACFPIPLTHTHTHTHTHTISLIK*VEGPED Trigger: GTCCTCTGGCCCCTCTACCAATTTGATCAGAGATAT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | GACTTCTGGCCACCGGGAATTGCTGACCTCCAGGATTTTGTTTGCTTTGTTTTGACATATGCCAGCAGGTaGATACCTGTCAGGATGGAC | + |
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Preference number: 5 (lower is better) Translates to: DFWPPGIADLQDFVCFVLTYASR*IPVRMD Trigger: GTCCATCCTGACAGGTATCAACCTGCTGGCATATGT...CAAAACAAAGCAAACAAAATCCTGGAGGTCAGCAATTCCCGGTGGCCAGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | TTATATGGCCTGCTTCCCAATCCCCTTAACACACACACACACACACACACACACACATATGCCAGCAGGTaGATACCTGTCAGGATGGAC | + |
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Preference number: 5 (lower is better) Translates to: LYGLLPNPLNTHTHTHTHTYASR*IPVRMD Trigger: GTCCATCCTGACAGGTATCAACCTGCTGGCATATGT...GTGTGTGTGTGTGTGTGTGTGTGTGTTAAGGGGATTGGGAAGCAGGCCATATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | TGGAGTAAAGAACTGCAAAAGAGTGTGGGTAACTGTAAAGGAGTGTGGGATGTGATATCTCTGATCAAATaGGTAGAGGGGCCAGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: WSKELQKSVGNCKGVWDVISLIK*VEGPED Trigger: GTCCTCTGGCCCCTCTACCAATTTGATCAGAGATAT...CACATCCCACACTCCTTTACAGTTACCCACACTCTTTTGCAGTTCTTTACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS-3UTR CAA 90 bp | CTTTGTTTTGAATTTAAAGGAGAGGTACATTATATGGCCTGCTTCCCAATCCCCATATCTCTGATCAAATaGGTAGAGGGGCCAGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: LCFEFKGEVHYMACFPIPISLIK*VEGPED Trigger: GTCCTCTGGCCCCTCTACCAATTTGATCAGAGATAT...GGGGATTGGGAAGCAGGCCATATAATGTACCTCTCCTTTAAATTCAAAACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS CCA 72 bp | TCTCACCGGGCCTTGCACGGGTCCAGGCCACTTCAGTaGCATACGCCAAACAGGCAACGCAGGAGAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SHRALHGSRPLQ*HTPNRQRRRKW Trigger: CCACTTTCTCCTGCGTTGCCTGTTTGGCGTATGCCACTGAAGTGGCCTGGACCCGTGCAAGGCCCGGTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS GCA 72 bp | CACGGTAGCCATATAGCCAGTGATCTCACCGGGCCTTaGACGGGTCCAGGCCACTTCAGTGGCATACGCCAA | + |
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Preference number: 6 (lower is better) Translates to: HGSHIASDLTGP*TGPGHFSGIRQ Trigger: TTGGCGTATGCCACTGAAGTGGCCTGGACCCGTGCAAGGCCCGGTGAGATCACTGGCTATATGGCTACCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS CCA 72 bp | CCAAACAGGCAACGCAGGAGAAAGTGGTGGCAGCGATaGCATGGTCCCGGGTACGTCCATGAGCTAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: PNRQRRRKWWQR*HGPGYVHELGT Trigger: AGTTCCTAGCTCATGGACGTACCCGGGACCATGCCATCGCTGCCACCACTTTCTCCTGCGTTGCCTGTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS TCA 72 bp | TGGAGTACACCAGATCAGACACATATGCCAGCAGGTTaGTACCTGTCAGGATGGACACCGCCAGTCGTCGGT | + |
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Preference number: 6 (lower is better) Translates to: WSTPDQTHMPAG*YLSGWTPPVVG Trigger: ACCGACGACTGGCGGTGTCCATCCTGACAGGTATCAACCTGCTGGCATATGTGTCTGATCTGGTGTACTCCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS GCA 72 bp | CACCAGACGAGTGGAGTACACCAGATCAGACACATATaGCAGCAGGTTGATACCTGTCAGGATGGACACCGC | + |
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Preference number: 6 (lower is better) Translates to: HQTSGVHQIRHI*QQVDTCQDGHR Trigger: GCGGTGTCCATCCTGACAGGTATCAACCTGCTGGCATATGTGTCTGATCTGGTGTACTCCACTCGTCTGGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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| CDS CAA 72 bp | AAAGGGATGGGCAACACGTTGGTACAATCCCCCAGGTaGAGCAGGATGGTCACCCCTGCTAGTATGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: KGMGNTLVQSPR*SRMVTPASMKQ Trigger: CTGCTTCATACTAGCAGGGGTGACCATCCTGCTCAACCTGGGGGATTGTACCAACGTGTTGCCCATCCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000096744.8 ENSMUST00000164553.8 ENSMUST00000203328.4 ENSMUST00000203566.3 |
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