Pregenerated sensors for MXRA8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029070Ensembl transcript IDs: ENSMUST00000030947.4, ENSMUST00000141883.8
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGAGGCATTCGGCAGAAAGGAATCAGAAGCAGAGAAAGGGCCCTaGGCTAGCCTCAAGTTGCCCAAAGCAGCAAGGCGGGCCCATGAG | + |
|
Preference number: 1 (lower is better) Translates to: WEAFGRKESEAEKGP*ASLKLPKAARRAHE Trigger: CTCATGGGCCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCCTTTCTCTGCTTCTGATTCCTTTCTGCCGAATGCCTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR CCA 90 bp | AAGGCCAAGAGTCATACGGTACCCAGTAACTGCTGGTGTAGCTCTTaGGAGGCATTCGGCAGAAAGGAATCAGAAGCAGAGAAAGGGCCC | + |
|
Preference number: 1 (lower is better) Translates to: KAKSHTVPSNCWCSS*EAFGRKESEAEKGP Trigger: GGGCCCTTTCTCTGCTTCTGATTCCTTTCTGCCGAATGCCTCCCAAGAGCTACACCAGCAGTTACTGGGTACCGTATGACTCTTGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR CCA 90 bp | TTGCATTTGGTGGATATTAACAAGGGATCTTTGTTGTGTTTAAGTTaGGGGTACAACCATCAGTGGGCACAGGTGAAGGGCAGCAATCGT | + |
|
Preference number: 1 (lower is better) Translates to: LHLVDINKGSLLCLS*GYNHQWAQVKGSNR Trigger: ACGATTGCTGCCCTTCACCTGTGCCCACTGATGGTTGTACCCCCAACTTAAACACAACAAAGATCCCTTGTTAATATCCACCAAATGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAAAGTACAGGCAGCTGCTCTGCCAAGTTTCTAGGTAAGTCGGACCAGCCGTTGATACAGAGCTGCTaGCCCAGCCAGAAGCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GQSTGSCSAKFLGKSDQPLIQSC*PSQKLR Trigger: CCTGAGCTTCTGGCTGGGCCAGCAGCTCTGTATCAA...CGGCTGGTCCGACTTACCTAGAAACTTGGCAGAGCAGCTGCCTGTACTTTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR CAA 90 bp | AGAAAGGAATCAGAAGCAGAGAAAGGGCCCTGGGCTAGCCTCAAGTaGCCCAAAGCAGCAAGGCGGGCCCATGAGTCAGAACCTATAACA | + |
|
Preference number: 2 (lower is better) Translates to: RKESEAEKGPWASLK*PKAARRAHESEPIT Trigger: TGTTATAGGTTCTGACTCATGGGCCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCCTTTCTCTGCTTCTGATTCCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAGAGAAAGGGCCCTGGGCTAGCCTCAAGTTGCCCAAAGCAGCAAGGCGGGGGACTTTGCATTTGGTaGATATTAACAAGGGATCTT | + |
|
Preference number: 2 (lower is better) Translates to: KQRKGPGLASSCPKQQGGGLCIW*ILTRDL Trigger: AAGATCCCTTGTTAATATCCACCAAATGCAAAGTCC...CCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCCTTTCTCTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGTGTAGCTCTTGGGAGGCATTCGGCAGAAAGGAATCAGAAGCAGAGAAAGGCTAATGTGTTTAACTaGTGGCTAGGGAGTCTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: AGVALGRHSAERNQKQRKANVFN*WLGSLN Trigger: GTTAAGACTCCCTAGCCACCAGTTAAACACATTAGC...CTTTCTCTGCTTCTGATTCCTTTCTGCCGAATGCCTCCCAAGAGCTACACCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR CAA 90 bp | TGTCTTCCTGACCCTAGCAGTAAGAGGCCACGAGGGACTTTGCATTaGGTGGATATTAACAAGGGATCTTTGTTGTGTTTAAGTTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: CLPDPSSKRPRGTLH*VDINKGSLLCLSWG Trigger: CCCCCAACTTAAACACAACAAAGATCCCTTGTTAATATCCACCAAATGCAAAGTCCCTCGTGGCCTCTTACTGCTAGGGTCAGGAAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR CAA 90 bp | TTTAAGTGTCTTCCTGACCCTAGCAGTAAGAGGCCACGAGGGACTTaGCATTTGGTGGATATTAACAAGGGATCTTTGTTGTGTTTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: FKCLPDPSSKRPRGT*HLVDINKGSLLCLS Trigger: ACTTAAACACAACAAAGATCCCTTGTTAATATCCACCAAATGCAAAGTCCCTCGTGGCCTCTTACTGCTAGGGTCAGGAAGACACTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAAGGGCCCTGGGCTAGCCTCAAGTTGCCCAAAGCAGCAAGGCGGGCCCATTCAGGGAGATGTCCTTaGATACAGAGCTGCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: EKGPWASLKLPKAARRAHSGRCP*IQSCWP Trigger: GGGCCAGCAGCTCTGTATCAAAGGACATCTCCCTGA...ATGGGCCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCCTTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR GCA 72 bp | CAGAAGCAGAGAAAGGGCCCTGGGCTAGCCTCAAGTTaGCCAAAGCAGCAAGGCGGGCCCATGAGTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QKQRKGPGLASS*PKQQGGPMSQN Trigger: GTTCTGACTCATGGGCCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCCTTTCTCTGCTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGGCCCTGGGCTAGCCTCAAGTTGCCCAAAGCAGCAAGGCGGGCCCATGAGAGGCCACGAGGGACTTaGCATTTGGTGGATATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: KGPWASLKLPKAARRAHERPRGT*HLVDIN Trigger: GTTAATATCCACCAAATGCAAAGTCCCTCGTGGCCT...CTCATGGGCCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR TCA 72 bp | CGGGCCCATGAGTCAGAACCTATAACAGCAGGGCTCTaGACAGTACACAGGCACAATGCAGCTCAGGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RAHESEPITAGL*TVHRHNAAQED Trigger: GTCTTCCTGAGCTGCATTGTGCCTGTGTACTGTTCAGAGCCCTGCTGTTATAGGTTCTGACTCATGGGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGACAATGGCTAATGTGTTTAACTGGTGGCTAGGGAGTCTTAACTGGAATTTTCTAGGGAACCCACAGTaGCTCACCAAGATGAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RTMANVFNWWLGSLNWNFLGNPQ*LTKMRG Trigger: ACCCCTCATCTTGGTGAGCAACTGTGGGTTCCCTAG...AAAATTCCAGTTAAGACTCCCTAGCCACCAGTTAAACACATTAGCCATTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR CCA 72 bp | TCTTTGTTGTGTTTAAGTTGGGGGTACAACCATCAGTaGGCACAGGTGAAGGGCAGCAATCGTACTATACCA | + |
|
Preference number: 3 (lower is better) Translates to: SLLCLSWGYNHQ*AQVKGSNRTIP Trigger: TGGTATAGTACGATTGCTGCCCTTCACCTGTGCCCACTGATGGTTGTACCCCCAACTTAAACACAACAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR GCA 72 bp | TTCCTGACCCTAGCAGTAAGAGGCCACGAGGGACTTTaGATTTGGTGGATATTAACAAGGGATCTTTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: FLTLAVRGHEGL*IWWILTRDLCC Trigger: ACAACAAAGATCCCTTGTTAATATCCACCAAATGCAAAGTCCCTCGTGGCCTCTTACTGCTAGGGTCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGACAATGGCTAATGTGTTTAACTGGTGGCTAGGGAGTCTTAACTGGAATTTTCGAGGGACTTTGCATTaGGTGGATATTAACAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RTMANVFNWWLGSLNWNFRGTLH*VDINKG Trigger: TCCCTTGTTAATATCCACCAAATGCAAAGTCCCTCG...AAAATTCCAGTTAAGACTCCCTAGCCACCAGTTAAACACATTAGCCATTGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR CCA 90 bp | GGGCCCTGGGCTAGCCTCAAGTTGCCCAAAGCAGCAAGGCGGGCCCATGAGTCAGCAGGCAGAGGACTATaGGCCAGCTCAGCCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPWASLKLPKAARRAHESAGRGL*ASSALS Trigger: GGAGAGGGCTGAGCTGGCCCATAGTCCTCTGCCTGC...TGACTCATGGGCCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR TCA 90 bp | AAAGGGCCCTGGGCTAGCCTCAAGTTGCCCAAAGCAGCAAGGCGGGCCCATGAGCTAGGAGCACTGCTGTaGCCAGACCCATTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGPWASLKLPKAARRAHELGALL*PDPLPG Trigger: TCCTGGCAATGGGTCTGGTCACAGCAGTGCTCCTAG...CTCATGGGCCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR GCA 90 bp | CGCAGGAGGGTCAGGGAGATGTCCTTTGATACAGAGCTGCTGGCCCAGCCAGAAAGCCTGGGTTCCGGCTaGCAAGCTCACCACAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: RRRVREMSFDTELLAQPESLGSG*QAHHRL Trigger: GAGTCTGTGGTGAGCTTGGCAGCCGGAACCCAGGCT...TTCTGGCTGGGCCAGCAGCTCTGTATCAAAGGACATCTCCCTGACCCTCCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGGGCCCTGGGCTAGCCTCAAGTTGCCCAAAGCAGCAAGGCGGGCCCATGAGAAGTTGCCGTCGTaGAAAGCAGAAGGCGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EKGPWASLKLPKAARRAHEKLPS*KAEGDS Trigger: GCTGTCGCCTTCTGCTTTCCACGACGGCAACTTCTC...ATGGGCCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCCTTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR CCA 90 bp | GGGCAAAGTACAGGCAGCTGCTCTGCCAAGTTTCTAGGTAAGTCGGACCAGCCGACACCAGAGAGCTGCTaGCTGCTGCGGTCCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQSTGSCSAKFLGKSDQPTPESC*LLRSLK Trigger: CTTCAGGGACCGCAGCAGCCAGCAGCTCTCTGGTGT...CGGCTGGTCCGACTTACCTAGAAACTTGGCAGAGCAGCTGCCTGTACTTTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR GCA 90 bp | AAAGGGCCCTGGGCTAGCCTCAAGTTGCCCAAAGCAGCAAGGCGGGCCCATGAGAGTGATGGTGCAGGTTaGAGGTGTACACCCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGPWASLKLPKAARRAHESDGAG*RCTPLH Trigger: ATGAAGGGGTGTACACCTGCAACCTGCACCATCACT...CTCATGGGCCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR CAA 72 bp | TCAGAAGCAGAGAAAGGGCCCTGGGCTAGCCTCAAGTaGCCCAAAGCAGCAAGGCGGGCCCATGAGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SEAEKGPWASLK*PKAARRAHESE Trigger: TTCTGACTCATGGGCCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCCTTTCTCTGCTTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGTAGCTCTTGGGAGGCATTCGGCAGAAAGGAATCAGAAGCAGAGAAAGCAGCGTAGCACAGCCTaGGTTCCGGCTGCCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGVALGRHSAERNQKQRKQRSTA*VPAAKL Trigger: GAGCTTGGCAGCCGGAACCCAGGCTGTGCTACGCTG...CTTTCTCTGCTTCTGATTCCTTTCTGCCGAATGCCTCCCAAGAGCTACACCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR GCA 90 bp | TACAACCATCAGTGGGCACAGGTGAAGGGCAGCAATCGTACTATACCAGAGTCTCAGACACCAGAGAGCTaGTGGCTGCTGCGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YNHQWAQVKGSNRTIPESQTPES*WLLRSL Trigger: CAGGGACCGCAGCAGCCAGCAGCTCTCTGGTGTCTG...AGACTCTGGTATAGTACGATTGCTGCCCTTCACCTGTGCCCACTGATGGTTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR GCA 90 bp | TACAACCATCAGTGGGCACAGGTGAAGGGCAGCAATCGTACTATACCAGAGTCTACGCGCTGGCGATCATaGAGCCGGTCTTGGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YNHQWAQVKGSNRTIPESTRWRS*SRSWVH Trigger: GTGGACCCAAGACCGGCTGCATGATCGCCAGCGCGT...AGACTCTGGTATAGTACGATTGCTGCCCTTCACCTGTGCCCACTGATGGTTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR CCA 90 bp | CTGGAATTTTTAAGTGTCTTCCTGACCCTAGCAGTAAGAGGCCACGAGGGACTTTCATGCAGCCGGTCTTaGGTCCACACCATGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEFLSVFLTLAVRGHEGLSCSRS*VHTMRG Trigger: CCCCCGCATGGTGTGGACCCAAGACCGGCTGCATGA...AAGTCCCTCGTGGCCTCTTACTGCTAGGGTCAGGAAGACACTTAAAAATTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR CCA 90 bp | ATCTTTGTTGTGTTTAAGTTGGGGGTACAACCATCAGTGGGCACAGGTGAAGGGCAGTGGACCACGCGCTaGCGATCATGCAGCCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IFVVFKLGVQPSVGTGEGQWTTR*RSCSRS Trigger: AGACCGGCTGCATGATCGCCAGCGCGTGGTCCACTG...CCCTTCACCTGTGCCCACTGATGGTTGTACCCCCAACTTAAACACAACAAAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR TCA 90 bp | AAGTTGGGGGTACAACCATCAGTGGGCACAGGTGAAGGGCAGCAATCGTACTATCAAAGGCAGGCTCTGTaGCCTGTAGGTGGAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: KLGVQPSVGTGEGQQSYYQRQAL*PVGGRL Trigger: GAGTCTTCCACCTACAGGTCACAGAGCCTGCCTTTG...ATAGTACGATTGCTGCCCTTCACCTGTGCCCACTGATGGTTGTACCCCCAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR CCA 90 bp | CTGGAATTTTTAAGTGTCTTCCTGACCCTAGCAGTAAGAGGCCACGAGGGACTTTGCGCCTCCTCTAAATaGCGGTCAGTCCACACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEFLSVFLTLAVRGHEGLCASSK*RSVHTC Trigger: GCACGTGTGGACTGACCGCCATTTAGAGGAGGCGCA...AAGTCCCTCGTGGCCTCTTACTGCTAGGGTCAGGAAGACACTTAAAAATTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR CCA 90 bp | CAACCATCAGTGGGCACAGGTGAAGGGCAGCAATCGTACTATACCAGAGTCTCTGAGCCTGATCCCTTGTaGCTACAGCAAACTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QPSVGTGEGQQSYYTRVSEPDPL*LQQTPP Trigger: TGGTGGAGTTTGCTGTAGCCACAAGGGATCAGGCTC...AGAGACTCTGGTATAGTACGATTGCTGCCCTTCACCTGTGCCCACTGATGGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGCGATTCTAGGAAGGGCAAAGTACAGGCAGCTGCTCTGCCAAGTTTCTTGCAGTACTCCTTCCTaGACTCTTTATCCAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVAILGRAKYRQLLCQVSCSTPS*TLYPDP Trigger: TGGATCTGGATAAAGAGTTCAGGAAGGAGTACTGCA...AGAAACTTGGCAGAGCAGCTGCCTGTACTTTGCCCTTCCTAGAATCGCCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR GCA 90 bp | ATCTTTGTTGTGTTTAAGTTGGGGGTACAACCATCAGTGGGCACAGGTGAAGGGTGTGACCAGACCCATTaGCAGGAGAAGCACGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFVVFKLGVQPSVGTGEGCDQTH*QEKHEL Trigger: CAGCTCGTGCTTCTCCTGGCAATGGGTCTGGTCACA...CCCTTCACCTGTGCCCACTGATGGTTGTACCCCCAACTTAAACACAACAAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR CAA 72 bp | AATCGTACTATACCAGAGTCTCTAGGGAACCCACAGTaGCTCACCAAGATGAGGGGTGGCGATTCTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NRTIPESLGNPQ*LTKMRGGDSRK Trigger: CTTCCTAGAATCGCCACCCCTCATCTTGGTGAGCAACTGTGGGTTCCCTAGAGACTCTGGTATAGTACGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| 3UTR CAA 72 bp | GACCCTAGCAGTAAGAGGCCACGAGGGACTTTGCATTaGGTGGATATTAACAAGGGATCTTTGTTGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: DPSSKRPRGTLH*VDINKGSLLCL Trigger: TAAACACAACAAAGATCCCTTGTTAATATCCACCAAATGCAAAGTCCCTCGTGGCCTCTTACTGCTAGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS GCA 90 bp | CCCGGGCCCCCGCTGAGGTCCCAGTGGACCACGCGCTGGCGATCATaGAGCCGGTCTTGGGTCCACACCATGCGGGGGCTCTGGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PGPPLRSQWTTRWRS*SRSWVHTMRGLWQR Trigger: ACGCTGCCAGAGCCCCCGCATGGTGTGGACCCAAGACCGGCTGCATGATCGCCAGCGCGTGGTCCACTGGGACCTCAGCGGGGGCCCGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 90 bp | CGTTGGCTGCCCGGGCCCCCGCTGAGGTCCCAGTGGACCACGCGCTaGCGATCATGCAGCCGGTCTTGGGTCCACACCATGCGGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RWLPGPPLRSQWTTR*RSCSRSWVHTMRGL Trigger: GAGCCCCCGCATGGTGTGGACCCAAGACCGGCTGCATGATCGCCAGCGCGTGGTCCACTGGGACCTCAGCGGGGGCCCGGGCAGCCAACG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 90 bp | ACGCGCTGTTCACCCGCCGAATACATATCCACAAGTCGGCGCCGTTaGCTGCCCGGGCCCCCGCTGAGGTCCCAGTGGACCACGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TRCSPAEYISTSRRR*LPGPPLRSQWTTRW Trigger: CCAGCGCGTGGTCCACTGGGACCTCAGCGGGGGCCCGGGCAGCCAACGGCGCCGACTTGTGGATATGTATTCGGCGGGTGAACAGCGCGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 90 bp | CTGAGGTCCCAGTGGACCACGCGCTGGCGATCATGCAGCCGGTCTTaGGTCCACACCATGCGGGGGCTCTGGCAGCGTAGCACAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRSQWTTRWRSCSRS*VHTMRGLWQRSTAW Trigger: CCAGGCTGTGCTACGCTGCCAGAGCCCCCGCATGGTGTGGACCCAAGACCGGCTGCATGATCGCCAGCGCGTGGTCCACTGGGACCTCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS TCA 90 bp | AATACATATCCACAAGTCGGCGCCGTTGGCTGCCCGGGCCCCCGCTaGGGTCCCAGTGGACCACGCGCTGGCGATCATGCAGCCGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NTYPQVGAVGCPGPR*GPSGPRAGDHAAGL Trigger: AAGACCGGCTGCATGATCGCCAGCGCGTGGTCCACTGGGACCTCAGCGGGGGCCCGGGCAGCCAACGGCGCCGACTTGTGGATATGTATT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 90 bp | TGGCGATCATGCAGCCGGTCTTGGGTCCACACCATGCGGGGGCTCTaGCAGCGTAGCACAGCCTGGGTTCCGGCTGCCAAGCTCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: WRSCSRSWVHTMRGL*QRSTAWVPAAKLTT Trigger: TGTGGTGAGCTTGGCAGCCGGAACCCAGGCTGTGCTACGCTGCCAGAGCCCCCGCATGGTGTGGACCCAAGACCGGCTGCATGATCGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 90 bp | TCGCCTCTGTCCACAGCGCGAATGAGCAGCGAGAAGTTGCCGTCGTaGAAAGCAGAAGGCGACAGCAGGAGGCGGTCGCGATCGCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLSTARMSSEKLPS*KAEGDSRRRSRSRG Trigger: GCCGCGCGATCGCGACCGCCTCCTGCTGTCGCCTTCTGCTTTCCACGACGGCAACTTCTCGCTGCTCATTCGCGCTGTGGACAGAGGCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 90 bp | CGGTCGGCGCGGTCGTGTGACACCCCAGGTAGCTGTCGGTCCCAATaGACCACCTGCTGCGCCTCCTCTAAATGGCGGTCAGTCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: RSARSCDTPGSCRSQ*TTCCASSKWRSVHT Trigger: CGTGTGGACTGACCGCCATTTAGAGGAGGCGCAGCAGGTGGTCCATTGGGACCGACAGCTACCTGGGGTGTCACACGACCGCGCCGACCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS TCA 90 bp | GCTGCGCCTCCTCTAAATGGCGGTCAGTCCACACGTGCGCACGGTTaGTGCAGGTCATCAGTGCCGGCGCGCCATGGGCCACCACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: AAPPLNGGQSTRAHG*CRSSVPARHGPPPT Trigger: TGTTGGTGGTGGCCCATGGCGCGCCGGCACTGATGACCTGCATCAACCGTGCGCACGTGTGGACTGACCGCCATTTAGAGGAGGCGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS GCA 90 bp | GGGTTCCGGCTGCCAAGCTCACCACAGACTCAGACACCAGAGAGCTaGTGGCTGCTGCGGTCCCTGAAGGCCCTGAGGACAGGACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GFRLPSSPQTQTPES*WLLRSLKALRTGLQ Trigger: CTGCAGTCCTGTCCTCAGGGCCTTCAGGGACCGCAGCAGCCAGCAGCTCTCTGGTGTCTGAGTCTGTGGTGAGCTTGGCAGCCGGAACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS GCA 90 bp | CGGTCGTGTGACACCCCAGGTAGCTGTCGGTCCCAATGGACCACCTaGTGCGCCTCCTCTAAATGGCGGTCAGTCCACACGTGCGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: RSCDTPGSCRSQWTT*CASSKWRSVHTCAR Trigger: CCGTGCGCACGTGTGGACTGACCGCCATTTAGAGGAGGCGCAGCAGGTGGTCCATTGGGACCGACAGCTACCTGGGGTGTCACACGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS TCA 90 bp | GAGCTGCTGGCTGCTGCGGTCCCTGAGGACAGGACTGCAGAGCTCTaGAGAAGCAGCAGTTTCCACAGCAGGACGCGGGACAGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELLAAAVPEDRTAEL*RSSSFHSRTRDSSS Trigger: GGAGCTGCTGTCCCGCGTCCTGCTGTGGAAACTGCTGCTTCTTCAGAGCTCTGCAGTCCTGTCCTCAGGGACCGCAGCAGCCAGCAGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141883.8 |
||
| CDS GCA 90 bp | ATGGCGGTCAGTCCACACGTGCGCACGGTTGATGCAGGTCATCAGTaGCGGCGCGCCATGGGCCACCACCAACACTTCCTTCTCACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: MAVSPHVRTVDAGHQ*RRAMGHHQHFLLTV Trigger: GACGGTGAGAAGGAAGTGTTGGTGGTGGCCCATGGCGCGCCGGCACTGATGACCTGCATCAACCGTGCGCACGTGTGGACTGACCGCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 90 bp | TTCCGGCTGCCAAGCTCACCACAGACTCAGACACCAGAGAGCTGCTaGCTGCTGCGGTCCCTGAAGGCCCTGAGGACAGGACTGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRLPSSPQTQTPESC*LLRSLKALRTGLQS Trigger: GCTCTGCAGTCCTGTCCTCAGGGCCTTCAGGGACCGCAGCAGCCAGCAGCTCTCTGGTGTCTGAGTCTGTGGTGAGCTTGGCAGCCGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS CCA 90 bp | TCTTGGGTCCACACCATGCGGGGGCTCTGGCAGCGTAGCACAGCCTaGGTTCCGGCTGCCAAGCTCACCACAGACTCAGACACCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SWVHTMRGLWQRSTA*VPAAKLTTDSDTRE Trigger: CTCTCTGGTGTCTGAGTCTGTGGTGAGCTTGGCAGCCGGAACCCAGGCTGTGCTACGCTGCCAGAGCCCCCGCATGGTGTGGACCCAAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 90 bp | CACACGTGCGCACGGTTGATGCAGGTCATCAGTGCCGGCGCGCCATaGGCCACCACCAACACTTCCTTCTCACCGTCCCAGTATGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: HTCARLMQVISAGAP*ATTNTSFSPSQYAR Trigger: TCGCGCATACTGGGACGGTGAGAAGGAAGTGTTGGTGGTGGCCCATGGCGCGCCGGCACTGATGACCTGCATCAACCGTGCGCACGTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS-3UTR CAA 90 bp | GGGCCCTGGGCTAGCCTCAAGTTGCCCAAAGCAGCAAGGCGGGCCCATGAGTCACACACGTGCGCACGGTaGATGCAGGTCATCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPWASLKLPKAARRAHESHTCAR*MQVISA Trigger: GGCACTGATGACCTGCATCAACCGTGCGCACGTGTG...TGACTCATGGGCCCGCCTTGCTGCTTTGGGCAACTTGAGGCTAGCCCAGGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS TCA 90 bp | CTGTGGCCTCGGGTCAGGGTGGGATCTGGGCTAGGAGCACTGCTGTaGCCAGACCCATTGCCAGGAGAAGCACGAGCTGGTGGCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LWPRVRVGSGLGALL*PDPLPGEARAGGSK Trigger: CTTTGAGCCACCAGCTCGTGCTTCTCCTGGCAATGGGTCTGGTCACAGCAGTGCTCCTAGCCCAGATCCCACCCTGACCCGAGGCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS GCA 90 bp | TCGTGTGACACCCCAGGTAGCTGTCGGTCCCAATGGACCACCTGCTaGGCCTCCTCTAAATGGCGGTCAGTCCACACGTGCGCACGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCDTPGSCRSQWTTC*ASSKWRSVHTCARL Trigger: CAACCGTGCGCACGTGTGGACTGACCGCCATTTAGAGGAGGCGCAGCAGGTGGTCCATTGGGACCGACAGCTACCTGGGGTGTCACACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS GCA 90 bp | GGGTTCCGGCTGCCAAGCTCACCACAGACTCAGACACCAGAGAGCTaGTGGCTGCTGCGGTCCCTGAGGACAGGACTGCAGAGCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GFRLPSSPQTQTPES*WLLRSLRTGLQSSE Trigger: TTCAGAGCTCTGCAGTCCTGTCCTCAGGGACCGCAGCAGCCAGCAGCTCTCTGGTGTCTGAGTCTGTGGTGAGCTTGGCAGCCGGAACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141883.8 |
||
| CDS TCA 90 bp | CATTGCCAGGAGAAGCACGAGCTGGTGGCTCAAAGGCAGGCTCTGTaGCCTGTAGGTGGAAGACTCGGCGCTCGTGGAGGCCACAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HCQEKHELVAQRQAL*PVGGRLGARGGHSS Trigger: ACTACTGTGGCCTCCACGAGCGCCGAGTCTTCCACCTACAGGTCACAGAGCCTGCCTTTGAGCCACCAGCTCGTGCTTCTCCTGGCAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 90 bp | GGTAGCTGTCGGTCCCAATGGACCACCTGCTGCGCCTCCTCTAAATaGCGGTCAGTCCACACGTGCGCACGGTTGATGCAGGTCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSCRSQWTTCCASSK*RSVHTCARLMQVIS Trigger: ACTGATGACCTGCATCAACCGTGCGCACGTGTGGACTGACCGCCATTTAGAGGAGGCGCAGCAGGTGGTCCATTGGGACCGACAGCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS TCA 90 bp | GGTTGCAGGTGTACACCCCTTCATCGCCTCTGTCCACAGCGCGAATaGGCAGCGAGAAGTTGCCGTCGTGGAAAGCAGAAGGCGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GCRCTPLHRLCPQRE*AARSCRRGKQKATA Trigger: TGCTGTCGCCTTCTGCTTTCCACGACGGCAACTTCTCGCTGCTCATTCGCGCTGTGGACAGAGGCGATGAAGGGGTGTACACCTGCAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 90 bp | CCAGCTCATCGATGCGTAGGGAGAAGTCACCGCGTGCAAAAGCGTTaGTGTTCACTGACACGCGATCACGCAGGAAGGGTGGCCCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAHRCVGRSHRVQKR*CSLTRDHAGRVAHR Trigger: CCTATGGGCCACCCTTCCTGCGTGATCGCGTGTCAGTGAACACCAACGCTTTTGCACGCGGTGACTTCTCCCTACGCATCGATGAGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 90 bp | GACAATGACATTGATGATGCTGTGGCCTCGGGTCAGGGTGGGATCTaGGCTAGGAGCACTGCTGTGACCAGACCCATTGCCAGGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: DNDIDDAVASGQGGI*ARSTAVTRPIARRS Trigger: GCTTCTCCTGGCAATGGGTCTGGTCACAGCAGTGCTCCTAGCCCAGATCCCACCCTGACCCGAGGCCACAGCATCATCAATGTCATTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR CAA 90 bp | CGCAGGAGGGTCAGGGAGATGTCCTTTGATACAGAGCTGCTGGCCCAGCCAGAATCCAGATCCACATCCTaGGCAGGCAGAGGACTATGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRVREMSFDTELLAQPESRSTS*AGRGLW Trigger: CCATAGTCCTCTGCCTGCCAAGGATGTGGATCTGGA...TTCTGGCTGGGCCAGCAGCTCTGTATCAAAGGACATCTCCCTGACCCTCCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS GCA 90 bp | GGTGGCAGGAATAGATGCCCTCATCAGCTCGCTCCAGCTCATCGATaGGTAGGGAGAAGTCACCGCGTGCAAAAGCGTTGGTGTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GGRNRCPHQLAPAHR*VGRSHRVQKRWCSL Trigger: CAGTGAACACCAACGCTTTTGCACGCGGTGACTTCTCCCTACGCATCGATGAGCTGGAGCGAGCTGATGAGGGCATCTATTCCTGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS-3UTR CAA 90 bp | CGCAGGAGGGTCAGGGAGATGTCCTTTGATACAGAGCTGCTGGCCCAGCCAGAAATGAGCAGCGAGAAGTaGCCGTCGTGGAAAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RRRVREMSFDTELLAQPEMSSEK*PSWKAE Trigger: TTCTGCTTTCCACGACGGCAACTTCTCGCTGCTCAT...TTCTGGCTGGGCCAGCAGCTCTGTATCAAAGGACATCTCCCTGACCCTCCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS CCA 90 bp | GGCCAACACATAGCCCAGTTGCTGGAAGAAATGTGTGTGGTCCTCTaGGACAATGACATTGATGATGCTGTGGCCTCGGGTCAGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQHIAQLLEEMCVVL*DNDIDDAVASGQGG Trigger: CCCACCCTGACCCGAGGCCACAGCATCATCAATGTCATTGTCCCAGAGGACCACACACATTTCTTCCAGCAACTGGGCTATGTGTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR CAA 90 bp | GGGCAAAGTACAGGCAGCTGCTCTGCCAAGTTTCTAGGTAAGTCGGACCAGCCGCAACACATAGCCCAGTaGCTGGAAGAAATGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GQSTGSCSAKFLGKSDQPQHIAQ*LEEMCV Trigger: CACACACATTTCTTCCAGCAACTGGGCTATGTGTTG...CGGCTGGTCCGACTTACCTAGAAACTTGGCAGAGCAGCTGCCTGTACTTTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS-3UTR CAA 90 bp | AGGACAATGGCTAATGTGTTTAACTGGTGGCTAGGGAGTCTTAACTGGAATTTTATCATGCAGCCGGTCTaGGGTCCACACCATGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTMANVFNWWLGSLNWNFIMQPV*GPHHAG Trigger: CCCCGCATGGTGTGGACCCAAGACCGGCTGCATGAT...AAAATTCCAGTTAAGACTCCCTAGCCACCAGTTAAACACATTAGCCATTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS CCA 90 bp | AATCTAGCTGGATGTCCTCAGTCCTATATGGAGCCTGATCCCTTGTaGCTACAGCAAACTCCACCATGTTCACATCCTTCCCCTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: NLAGCPQSYMEPDPL*LQQTPPCSHPSPLT Trigger: AGTCAAAGGGGAAGGATGTGAACATGGTGGAGTTTGCTGTAGCCACAAGGGATCAGGCTCCATATAGGACTGAGGACATCCAGCTAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS TCA 72 bp | CCACAAGTCGGCGCCGTTGGCTGCCCGGGCCCCCGCTaGGGTCCCAGTGGACCACGCGCTGGCGATCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: PQVGAVGCPGPR*GPSGPRAGDHA Trigger: TGCATGATCGCCAGCGCGTGGTCCACTGGGACCTCAGCGGGGGCCCGGGCAGCCAACGGCGCCGACTTGTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 72 bp | CCCGGGCCCCCGCTGAGGTCCCAGTGGACCACGCGCTaGCGATCATGCAGCCGGTCTTGGGTCCACACCATG | + |
|
Preference number: 6 (lower is better) Translates to: PGPPLRSQWTTR*RSCSRSWVHTM Trigger: CATGGTGTGGACCCAAGACCGGCTGCATGATCGCCAGCGCGTGGTCCACTGGGACCTCAGCGGGGGCCCGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS GCA 72 bp | CAGGAAGGGTGGCCCATAGGCGCGGCGCTCGCCAGATaGATACAGGTCAAGCAGGCGGTCGGCGCGGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: QEGWPIGAALAR*IQVKQAVGAVV Trigger: CACGACCGCGCCGACCGCCTGCTTGACCTGTATGCATCTGGCGAGCGCCGCGCCTATGGGCCACCCTTCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 72 bp | TGCAGCCGGTCTTGGGTCCACACCATGCGGGGGCTCTaGCAGCGTAGCACAGCCTGGGTTCCGGCTGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CSRSWVHTMRGL*QRSTAWVPAAK Trigger: CTTGGCAGCCGGAACCCAGGCTGTGCTACGCTGCCAGAGCCCCCGCATGGTGTGGACCCAAGACCGGCTGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 72 bp | CAGTGGACCACGCGCTGGCGATCATGCAGCCGGTCTTaGGTCCACACCATGCGGGGGCTCTGGCAGCGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: QWTTRWRSCSRS*VHTMRGLWQRS Trigger: GCTACGCTGCCAGAGCCCCCGCATGGTGTGGACCCAAGACCGGCTGCATGATCGCCAGCGCGTGGTCCACTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 72 bp | CACACCATGCGGGGGCTCTGGCAGCGTAGCACAGCCTaGGTTCCGGCTGCCAAGCTCACCACAGACTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HTMRGLWQRSTA*VPAAKLTTDSD Trigger: GTCTGAGTCTGTGGTGAGCTTGGCAGCCGGAACCCAGGCTGTGCTACGCTGCCAGAGCCCCCGCATGGTGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CAA 90 bp | TGCTGCGCCTCCTCTAAATGGCGGTCAGTCCACACGTGCGCACGGTaGATGCAGGTCATCAGTGCCGGCGCGCCATGGGCCACCACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: CCASSKWRSVHTCAR*MQVISAGAPWATTN Trigger: GTTGGTGGTGGCCCATGGCGCGCCGGCACTGATGACCTGCATCAACCGTGCGCACGTGTGGACTGACCGCCATTTAGAGGAGGCGCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS TCA 72 bp | CCTCTAAATGGCGGTCAGTCCACACGTGCGCACGGTTaGTGCAGGTCATCAGTGCCGGCGCGCCATGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLNGGQSTRAHG*CRSSVPARHGP Trigger: TGGCCCATGGCGCGCCGGCACTGATGACCTGCATCAACCGTGCGCACGTGTGGACTGACCGCCATTTAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 72 bp | GCACGGTTGATGCAGGTCATCAGTGCCGGCGCGCCATaGGCCACCACCAACACTTCCTTCTCACCGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARLMQVISAGAP*ATTNTSFSPSQ Trigger: CTGGGACGGTGAGAAGGAAGTGTTGGTGGTGGCCCATGGCGCGCCGGCACTGATGACCTGCATCAACCGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CAA 72 bp | TCCTCTAAATGGCGGTCAGTCCACACGTGCGCACGGTaGATGCAGGTCATCAGTGCCGGCGCGCCATGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSKWRSVHTCAR*MQVISAGAPWA Trigger: GGCCCATGGCGCGCCGGCACTGATGACCTGCATCAACCGTGCGCACGTGTGGACTGACCGCCATTTAGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CAA 90 bp | ACCCCTTCATCGCCTCTGTCCACAGCGCGAATGAGCAGCGAGAAGTaGCCGTCGTGGAAAGCAGAAGGCGACAGCAGGAGGCGGTCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: TPSSPLSTARMSSEK*PSWKAEGDSRRRSR Trigger: TCGCGACCGCCTCCTGCTGTCGCCTTCTGCTTTCCACGACGGCAACTTCTCGCTGCTCATTCGCGCTGTGGACAGAGGCGATGAAGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS TCA 72 bp | GAGAAGCACGAGCTGGTGGCTCAAAGGCAGGCTCTGTaGCCTGTAGGTGGAAGACTCGGCGCTCGTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EKHELVAQRQAL*PVGGRLGARGG Trigger: GCCTCCACGAGCGCCGAGTCTTCCACCTACAGGTCACAGAGCCTGCCTTTGAGCCACCAGCTCGTGCTTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS TCA 72 bp | CGGGTCAGGGTGGGATCTGGGCTAGGAGCACTGCTGTaGCCAGACCCATTGCCAGGAGAAGCACGAGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RVRVGSGLGALL*PDPLPGEARAG Trigger: ACCAGCTCGTGCTTCTCCTGGCAATGGGTCTGGTCACAGCAGTGCTCCTAGCCCAGATCCCACCCTGACCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS TCA 72 bp | GCTGCTGCGGTCCCTGAGGACAGGACTGCAGAGCTCTaGAGAAGCAGCAGTTTCCACAGCAGGACGCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AAAVPEDRTAEL*RSSSFHSRTRD Trigger: GTCCCGCGTCCTGCTGTGGAAACTGCTGCTTCTTCAGAGCTCTGCAGTCCTGTCCTCAGGGACCGCAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141883.8 |
||
| CDS GCA 72 bp | CTGCCAAGCTCACCACAGACTCAGACACCAGAGAGCTaGTGGCTGCTGCGGTCCCTGAAGGCCCTGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: LPSSPQTQTPES*WLLRSLKALRT Trigger: TGTCCTCAGGGCCTTCAGGGACCGCAGCAGCCAGCAGCTCTCTGGTGTCTGAGTCTGTGGTGAGCTTGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS GCA 72 bp | AGTCCACACGTGCGCACGGTTGATGCAGGTCATCAGTaGCGGCGCGCCATGGGCCACCACCAACACTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SPHVRTVDAGHQ*RRAMGHHQHFL Trigger: AAGGAAGTGTTGGTGGTGGCCCATGGCGCGCCGGCACTGATGACCTGCATCAACCGTGCGCACGTGTGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS GCA 72 bp | ACCCCAGGTAGCTGTCGGTCCCAATGGACCACCTGCTaGGCCTCCTCTAAATGGCGGTCAGTCCACACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TPGSCRSQWTTC*ASSKWRSVHTC Trigger: GCACGTGTGGACTGACCGCCATTTAGAGGAGGCGCAGCAGGTGGTCCATTGGGACCGACAGCTACCTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 72 bp | CCAAGCTCACCACAGACTCAGACACCAGAGAGCTGCTaGCTGCTGCGGTCCCTGAAGGCCCTGAGGACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSSPQTQTPESC*LLRSLKALRTG Trigger: TCCTGTCCTCAGGGCCTTCAGGGACCGCAGCAGCCAGCAGCTCTCTGGTGTCTGAGTCTGTGGTGAGCTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS CCA 72 bp | TCCACAGCGCGAATGAGCAGCGAGAAGTTGCCGTCGTaGAAAGCAGAAGGCGACAGCAGGAGGCGGTCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: STARMSSEKLPS*KAEGDSRRRSR Trigger: TCGCGACCGCCTCCTGCTGTCGCCTTCTGCTTTCCACGACGGCAACTTCTCGCTGCTCATTCGCGCTGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 72 bp | CGGTCCCAATGGACCACCTGCTGCGCCTCCTCTAAATaGCGGTCAGTCCACACGTGCGCACGGTTGATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RSQWTTCCASSK*RSVHTCARLMQ Trigger: CTGCATCAACCGTGCGCACGTGTGGACTGACCGCCATTTAGAGGAGGCGCAGCAGGTGGTCCATTGGGACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 72 bp | CGGTCGTGTGACACCCCAGGTAGCTGTCGGTCCCAATaGACCACCTGCTGCGCCTCCTCTAAATGGCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSCDTPGSCRSQ*TTCCASSKWRS Trigger: TGACCGCCATTTAGAGGAGGCGCAGCAGGTGGTCCATTGGGACCGACAGCTACCTGGGGTGTCACACGACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS TCA 72 bp | GTCCCTGAAGGCCCTGAGGACAGGACTGCAGAGCTCTaGAGAAGCAGCAGTTTCCACAGCAGGACGCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VPEGPEDRTAEL*RSSSFHSRTRD Trigger: GTCCCGCGTCCTGCTGTGGAAACTGCTGCTTCTTCAGAGCTCTGCAGTCCTGTCCTCAGGGCCTTCAGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS TCA 72 bp | GGAGAAGTCACCGCGTGCAAAAGCGTTGGTGTTCACTaGCACGCGATCACGCAGGAAGGGTGGCCCATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GEVTACKSVGVH*HAITQEGWPIG Trigger: GCCTATGGGCCACCCTTCCTGCGTGATCGCGTGTCAGTGAACACCAACGCTTTTGCACGCGGTGACTTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS GCA 72 bp | GGCTCTCATCGAGGTGGCAGTAGTGATGGTGCAGGTTaGAGGTGTACACCCCTTCATCGCCTCTGTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: GSHRGGSSDGAG*RCTPLHRLCPQ Trigger: CTGTGGACAGAGGCGATGAAGGGGTGTACACCTGCAACCTGCACCATCACTACTGCCACCTCGATGAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 72 bp | CGATGCGTAGGGAGAAGTCACCGCGTGCAAAAGCGTTaGTGTTCACTGACACGCGATCACGCAGGAAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RCVGRSHRVQKR*CSLTRDHAGRV Trigger: CACCCTTCCTGCGTGATCGCGTGTCAGTGAACACCAACGCTTTTGCACGCGGTGACTTCTCCCTACGCATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 72 bp | GTGTGGTCCTCTGGGACAATGACATTGATGATGCTGTaGCCTCGGGTCAGGGTGGGATCTGGGCTAGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VWSSGTMTLMML*PRVRVGSGLGA Trigger: TGCTCCTAGCCCAGATCCCACCCTGACCCGAGGCCACAGCATCATCAATGTCATTGTCCCAGAGGACCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS TCA 72 bp | TGTACACCCCTTCATCGCCTCTGTCCACAGCGCGAATaGGCAGCGAGAAGTTGCCGTCGTGGAAAGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CTPLHRLCPQRE*AARSCRRGKQK Trigger: CTTCTGCTTTCCACGACGGCAACTTCTCGCTGCTCATTCGCGCTGTGGACAGAGGCGATGAAGGGGTGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CAA 72 bp | TCGATGCGTAGGGAGAAGTCACCGCGTGCAAAAGCGTaGGTGTTCACTGACACGCGATCACGCAGGAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SMRREKSPRAKA*VFTDTRSRRKG Trigger: ACCCTTCCTGCGTGATCGCGTGTCAGTGAACACCAACGCTTTTGCACGCGGTGACTTCTCCCTACGCATCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CAA 90 bp | CCCAGTTGCTGGAAGAAATGTGTGTGGTCCTCTGGGACAATGACATaGATGATGCTGTGGCCTCGGGTCAGGGTGGGATCTGGGCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSCWKKCVWSSGTMT*MMLWPRVRVGSGLG Trigger: TCCTAGCCCAGATCCCACCCTGACCCGAGGCCACAGCATCATCAATGTCATTGTCCCAGAGGACCACACACATTTCTTCCAGCAACTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS GCA 72 bp | AATAGATGCCCTCATCAGCTCGCTCCAGCTCATCGATaGGTAGGGAGAAGTCACCGCGTGCAAAAGCGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: NRCPHQLAPAHR*VGRSHRVQKRW Trigger: CCAACGCTTTTGCACGCGGTGACTTCTCCCTACGCATCGATGAGCTGGAGCGAGCTGATGAGGGCATCTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030947.4 ENSMUST00000141883.8 |
||
| CDS CCA 72 bp | TTATCCAGATCCACATCCTTGGCAGGCAGAGGACTATaGGCCAGCTCAGCCCTCTCCTTCAGGATGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSRSTSLAGRGL*ASSALSFRMLF Trigger: AAACAACATCCTGAAGGAGAGGGCTGAGCTGGCCCATAGTCCTCTGCCTGCCAAGGATGTGGATCTGGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS CCA 72 bp | ATAGCCCAGTTGCTGGAAGAAATGTGTGTGGTCCTCTaGGACAATGACATTGATGATGCTGTGGCCTCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: IAQLLEEMCVVL*DNDIDDAVASG Trigger: ACCCGAGGCCACAGCATCATCAATGTCATTGTCCCAGAGGACCACACACATTTCTTCCAGCAACTGGGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS CCA 72 bp | GGATGTCCTCAGTCCTATATGGAGCCTGATCCCTTGTaGCTACAGCAAACTCCACCATGTTCACATCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GCPQSYMEPDPL*LQQTPPCSHPS Trigger: GGAAGGATGTGAACATGGTGGAGTTTGCTGTAGCCACAAGGGATCAGGCTCCATATAGGACTGAGGACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS CAA 72 bp | GCTGGATGTCCTCAGTCCTATATGGAGCCTGATCCCTaGTGGCTACAGCAAACTCCACCATGTTCACATCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGCPQSYMEPDP*WLQQTPPCSHP Trigger: AGGATGTGAACATGGTGGAGTTTGCTGTAGCCACAAGGGATCAGGCTCCATATAGGACTGAGGACATCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||
| CDS CAA 90 bp | TGTAATCTAGCTGGATGTCCTCAGTCCTATATGGAGCCTGATCCCTaGTGGCTACAGCAAACTCCACCATGTTCACATCCTTCCCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CNLAGCPQSYMEPDP*WLQQTPPCSHPSPL Trigger: CAAAGGGGAAGGATGTGAACATGGTGGAGTTTGCTGTAGCCACAAGGGATCAGGCTCCATATAGGACTGAGGACATCCAGCTAGATTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030947.4 |
||