Pregenerated sensors for MXD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037235Ensembl transcript IDs: ENSMUST00000042701.13, ENSMUST00000119171.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCATGGGGTCTAGCCCTGCGGAGAAGGGGCAGGCAACTTGAGTCCTaGCCGAAGGGTAGGCAGGCAGAGGCAGGCAGACCAGACAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: AWGLALRRRGRQLES*PKGRQAEAGRPDSS Trigger: GCTGCTGTCTGGTCTGCCTGCCTCTGCCTGCCTACCCTTCGGTCAGGACTCAAGTTGCCTGCCCCTTCTCCGCAGGGCTAGACCCCATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR CCA 90 bp | CCCATTCCAGTCTGCAGCTCAGGTCTCATAACTCGCCCACCGCACTaGCACCAGGCCCCTTGTGTAGCCCCTGACTCTGGCACGGAACCT | + |
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Preference number: 1 (lower is better) Translates to: PIPVCSSGLITRPPH*HQAPCVAPDSGTEP Trigger: AGGTTCCGTGCCAGAGTCAGGGGCTACACAAGGGGCCTGGTGCCAGTGCGGTGGGCGAGTTATGAGACCTGAGCTGCAGACTGGAATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR TCA 90 bp | AGGCCCATGACGAGGCTGGCTTCAGTCAAGGGAGGATTGGAAGGCTaGGACGCTTGGCTAGGTGAGCAGGCAGGTGGGCCAAGAAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: RPMTRLASVKGGLEG*DAWLGEQAGGPRSK Trigger: TTTGCTTCTTGGCCCACCTGCCTGCTCACCTAGCCAAGCGTCTCAGCCTTCCAATCCTCCCTTGACTGAAGCCAGCCTCGTCATGGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR CCA 90 bp | CTGCTGTCCCGGAACTTTCAGGCACAGCCACTCTGCCAGTTACCATaGAGGCACCACTGGAGGCCAGGTTATAGCCCTGCAGGATACAGG | + |
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Preference number: 1 (lower is better) Translates to: LLSRNFQAQPLCQLP*RHHWRPGYSPAGYR Trigger: CCTGTATCCTGCAGGGCTATAACCTGGCCTCCAGTGGTGCCTCCATGGTAACTGGCAGAGTGGCTGTGCCTGAAAGTTCCGGGACAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR TCA 90 bp | CCAGACAGCAGCTGTAGCTTCGAGAATGGCACAGCAGTAGGCCCATaGCGAGGCTGGCTTCAGTCAAGGGAGGATTGGAAGGCTGAGACG | + |
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Preference number: 1 (lower is better) Translates to: PDSSCSFENGTAVGP*RGWLQSREDWKAET Trigger: CGTCTCAGCCTTCCAATCCTCCCTTGACTGAAGCCAGCCTCGTCATGGGCCTACTGCTGTGCCATTCTCGAAGCTACAGCTGCTGTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR TCA 90 bp | GGGTCTGGTACATCTGGACCACCTCCTAGTAGAGAGGCCCAAGCCTaGGCCTGGAGTTCCAGACTCTGTTATGGCACACCGCATGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: GSGTSGPPPSREAQA*AWSSRLCYGTPHGS Trigger: TGAGCCATGCGGTGTGCCATAACAGAGTCTGGAACTCCAGGCTCAGGCTTGGGCCTCTCTACTAGGAGGTGGTCCAGATGTACCAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR CCA 90 bp | GGAAATTGTTTACGAATGCACCAGAGGAGGTGGCAGGTGCTGCTGTaGGCCAGCCCGTGGCCACTACCCAAATATTGCTGTGTGGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: GNCLRMHQRRWQVLL*ASPWPLPKYCCVVP Trigger: GGGCACCACACAGCAATATTTGGGTAGTGGCCACGGGCTGGCCCACAGCAGCACCTGCCACCTCCTCTGGTGCATTCGTAAACAATTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR CCA 90 bp | AACTTTCAGGCACAGCCACTCTGCCAGTTACCATGGAGGCACCACTaGAGGCCAGGTTATAGCCCTGCAGGATACAGGAATCAGCCTCGG | + |
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Preference number: 1 (lower is better) Translates to: NFQAQPLCQLPWRHH*RPGYSPAGYRNQPR Trigger: CCGAGGCTGATTCCTGTATCCTGCAGGGCTATAACCTGGCCTCCAGTGGTGCCTCCATGGTAACTGGCAGAGTGGCTGTGCCTGAAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR GCA 90 bp | AGGACCCAGTGGTTTCAGCTTGCCACCCAGCTTATTCCAGTCCTCTaGCAGGAAGAAAAGCCCTGTCTATTTCCTGTGCAGACCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: RTQWFQLATQLIPVL*QEEKPCLFPVQTRQ Trigger: CTGCCTGGTCTGCACAGGAAATAGACAGGGCTTTTCTTCCTGGCAGAGGACTGGAATAAGCTGGGTGGCAAGCTGAAACCACTGGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR GCA 90 bp | AGTTTGGAAATTGTTTACGAATGCACCAGAGGAGGTGGCAGGTGCTaGTGTGGGCCAGCCCGTGGCCACTACCCAAATATTGCTGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: SLEIVYECTRGGGRC*CGPARGHYPNIAVW Trigger: CCACACAGCAATATTTGGGTAGTGGCCACGGGCTGGCCCACAGCAGCACCTGCCACCTCCTCTGGTGCATTCGTAAACAATTTCCAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR GCA 90 bp | CACAGTTTGGAAATTGTTTACGAATGCACCAGAGGAGGTGGCAGGTaGTGCTGTGGGCCAGCCCGTGGCCACTACCCAAATATTGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: HSLEIVYECTRGGGR*CCGPARGHYPNIAV Trigger: CACAGCAATATTTGGGTAGTGGCCACGGGCTGGCCCACAGCAGCACCTGCCACCTCCTCTGGTGCATTCGTAAACAATTTCCAAACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR CCA 90 bp | AGCCTGGAGTTCCAGACTCTGTTATGGCACACCGCATGGCTCACATaGACAGGTGCAGGTGGAGGACATAGCAGCAGCTATTTTGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: SLEFQTLLWHTAWLT*TGAGGGHSSSYFGP Trigger: TGGACCAAAATAGCTGCTGCTATGTCCTCCACCTGCACCTGTCCATGTGAGCCATGCGGTGTGCCATAACAGAGTCTGGAACTCCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR TCA 90 bp | CCCAGATGGGCAGAAAATGTTGACAGAACCAGCTTACTAGGATGTTaGCGATCTTTCCTGGAGACACCTACCCAGGCCTGCTGTCCACCT | + |
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Preference number: 1 (lower is better) Translates to: PRWAENVDRTSLLGC*RSFLETPTQACCPP Trigger: AGGTGGACAGCAGGCCTGGGTAGGTGTCTCCAGGAAAGATCGTCAACATCCTAGTAAGCTGGTTCTGTCAACATTTTCTGCCCATCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR GCA 90 bp | GAAGATAAACAAGAATTTCCCCACAGTTTGGAAATTGTTTACGAATaGACCAGAGGAGGTGGCAGGTGCTGCTGTGGGCCAGCCCGTGGC | + |
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Preference number: 1 (lower is better) Translates to: EDKQEFPHSLEIVYE*TRGGGRCCCGPARG Trigger: GCCACGGGCTGGCCCACAGCAGCACCTGCCACCTCCTCTGGTGCATTCGTAAACAATTTCCAAACTGTGGGGAAATTCTTGTTTATCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR CCA 90 bp | TCTGGAATGATTAGGAATCTGAGAACAGATTGTGGGTGGCTACGCTaGACTCCAGGATGTAAGAGCCTGACACTGCTTCCCTGCATGGGG | + |
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Preference number: 1 (lower is better) Translates to: SGMIRNLRTDCGWLR*TPGCKSLTLLPCMG Trigger: CCCCATGCAGGGAAGCAGTGTCAGGCTCTTACATCCTGGAGTCCAGCGTAGCCACCCACAATCTGTTCTCAGATTCCTAATCATTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR GCA 90 bp | ATGTCCATGTGTATTTGTGCTTGTGGGTGTGAGCCTAGGCGTGTGTaGATACGTCTGATGGTCCTAAAAGAGCAGAAGCCACCCAACTTG | + |
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Preference number: 1 (lower is better) Translates to: MSMCICACGCEPRRV*IRLMVLKEQKPPNL Trigger: CAAGTTGGGTGGCTTCTGCTCTTTTAGGACCATCAGACGTATGCACACACGCCTAGGCTCACACCCACAAGCACAAATACACATGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR CCA 90 bp | CCTTCTTTCCTTCCTTCCTTTCTTCTTCAGTCCACTCCTTTCTCTTaGGATCCGATGTTGGGGTTCAAGCTCCCTATGGTGGTCATTAAG | + |
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Preference number: 1 (lower is better) Translates to: PSFLPSFLLQSTPFS*DPMLGFKLPMVVIK Trigger: CTTAATGACCACCATAGGGAGCTTGAACCCCAACATCGGATCCCAAGAGAAAGGAGTGGACTGAAGAAGAAAGGAAGGAAGGAAAGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR CCA 90 bp | TTTAATACTTCTGGAATGATTAGGAATCTGAGAACAGATTGTGGGTaGCTACGCTGGACTCCAGGATGTAAGAGCCTGACACTGCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: FNTSGMIRNLRTDCG*LRWTPGCKSLTLLP Trigger: GGGAAGCAGTGTCAGGCTCTTACATCCTGGAGTCCAGCGTAGCCACCCACAATCTGTTCTCAGATTCCTAATCATTCCAGAAGTATTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCTGGGCCTGCAGCAGGATGGTGGGTCTGGTACATCTGGACCACCTCCTACAGCTGAGGCTGCCCTaGGCAGGGTTCGCGAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: TSWACSRMVGLVHLDHLLQLRLP*AGFARP Trigger: GGGCCTCGCGAACCCTGCCCAGGGCAGCCTCAGCTG...TAGGAGGTGGTCCAGATGTACCAGACCCACCATCCTGCTGCAGGCCCAGCTGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR CCA 90 bp | ACTCTTAGCACCAGCCCCCATGCCTATAGATCACCCCTCACAGGCCTGCTAGCGTGGCAGGTGCTGCTGTaGGCCAGCCCGTGGCCACTA | + |
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Preference number: 2 (lower is better) Translates to: TLSTSPHAYRSPLTGLLAWQVLL*ASPWPL Trigger: TAGTGGCCACGGGCTGGCCCACAGCAGCACCTGCCA...CGCTAGCAGGCCTGTGAGGGGTGATCTATAGGCATGGGGGCTGGTGCTAAGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR TCA 90 bp | GCACAGCCCCATCTGTTTGACAGGTGGGATGGGGTCCCATTCCAGTCTGCAGCTCCCTTGTGTAGCCCCTaGCTCTGGCACGGAACCTGC | + |
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Preference number: 2 (lower is better) Translates to: AQPHLFDRWDGVPFQSAAPLCSP*LWHGTC Trigger: GCAGGTTCCGTGCCAGAGTCAGGGGCTACACAAGGG...AGCTGCAGACTGGAATGGGACCCCATCCCACCTGTCAAACAGATGGGGCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCTGGGCCTGCAGCAGGATGGTGGGTCTGGTACATCTGGACCACCTCCTACGATGTGACAGAGGATaGGTCCCTGAGACGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TSWACSRMVGLVHLDHLLRCDRG*VPETLG Trigger: ACCCAGCGTCTCAGGGACCCATCCTCTGTCACATCG...TAGGAGGTGGTCCAGATGTACCAGACCCACCATCCTGCTGCAGGCCCAGCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGGCAGAGGCAGGCAGACCAGACAGCAGCTGTAGCTTCGAGAATGGCACAGGAGGATTGGAAGGCTaGGACGCTTGGCTAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RQAEAGRPDSSCSFENGTGGLEG*DAWLGE Trigger: CTCACCTAGCCAAGCGTCTCAGCCTTCCAATCCTCC...TGTGCCATTCTCGAAGCTACAGCTGCTGTCTGGTCTGCCTGCCTCTGCCTGCCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTAGCACCAGCCCCCATGCCTATAGATCACCCCTCACAGGCCTGCTAGCGACCAGGAATGGGCTCTaGTGTCAGGGGTGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TLSTSPHAYRSPLTGLLATRNGL*CQGWKQ Trigger: CTGCTTCCACCCCTGACAGCAGAGCCCATTCCTGGT...CGCTAGCAGGCCTGTGAGGGGTGATCTATAGGCATGGGGGCTGGTGCTAAGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCAGGCACAGCCACTCTGCCAGTTACCATGGAGGCACCACTGGAGGCCAGGCTGGTGGCAGTGGGTaGGGTGAGACAAGGAACACA | + |
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Preference number: 2 (lower is better) Translates to: TFRHSHSASYHGGTTGGQAGGSG*GETRNT Trigger: TGTGTTCCTTGTCTCACCCCACCCACTGCCACCAGC...CTGGCCTCCAGTGGTGCCTCCATGGTAACTGGCAGAGTGGCTGTGCCTGAAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR GCA 90 bp | CCACAGTTTGGTGCACAACTCCATCTGCCTAGAAAGGCAAGCTCAAGCACCTGCGGGCCACCCACTAGATaGTCATCCAAGTCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: PQFGAQLHLPRKASSSTCGPPTR*SSKSCP Trigger: GGGGCAGGACTTGGATGAGCATCTAGTGGGTGGCCC...GCAGGTGCTTGAGCTTGCCTTTCTAGGCAGATGGAGTTGTGCACCAAACTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCTCCCTATGGTGGTCATTAAGGCCCCTACACGGATCCTGCCGAGATTTGCACTGCTTCCCTGCATaGGGTCTAGCCCTGCGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SSSLWWSLRPLHGSCRDLHCFPA*GLALRR Trigger: TCTCCGCAGGGCTAGACCCCATGCAGGGAAGCAGTG...CAAATCTCGGCAGGATCCGTGTAGGGGCCTTAATGACCACCATAGGGAGCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGCTCCCTATGGTGGTCATTAAGGCCCCTACACGGATCCTGCCGAGATTTGGGAGGATTGGAAGGCTaGGACGCTTGGCTAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SSSLWWSLRPLHGSCRDLGGLEG*DAWLGE Trigger: CTCACCTAGCCAAGCGTCTCAGCCTTCCAATCCTCC...CAAATCTCGGCAGGATCCGTGTAGGGGCCTTAATGACCACCATAGGGAGCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAGCTGGGCCTGCAGCAGGATGGTGGGTCTGGTACATCTGGACCACCTCCTAACCTGTCATTCTGAGTaGCCACAGAGCAGGTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: TSWACSRMVGLVHLDHLLTCHSE*PQSRFY Trigger: ATAGAACCTGCTCTGTGGGCACTCAGAATGACAGGT...TAGGAGGTGGTCCAGATGTACCAGACCCACCATCCTGCTGCAGGCCCAGCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTAGCACCAGCCCCCATGCCTATAGATCACCCCTCACAGGCCTGCTAGCGCTTATTCCAGTCCTCTaGCAGGAAGAAAAGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: TLSTSPHAYRSPLTGLLALIPVL*QEEKPC Trigger: ACAGGGCTTTTCTTCCTGGCAGAGGACTGGAATAAG...CGCTAGCAGGCCTGTGAGGGGTGATCTATAGGCATGGGGGCTGGTGCTAAGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR TCA 90 bp | ACTCTTAGCACCAGCCCCCATGCCTATAGATCACCCCTCACAGGCCTGCTAGCGATGGGCAGAAAATGTTaGCAGAACCAGCTTACTAGG | + |
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Preference number: 2 (lower is better) Translates to: TLSTSPHAYRSPLTGLLAMGRKC*QNQLTR Trigger: CCTAGTAAGCTGGTTCTGTCAACATTTTCTGCCCAT...CGCTAGCAGGCCTGTGAGGGGTGATCTATAGGCATGGGGGCTGGTGCTAAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR GCA 90 bp | GCAGGGAAGGCTTGGGGCACACAGAAAGGTAGGAACTGTCCAGCCACAGTTTGGTGTGTATTTATAAGCTaGCCATGGCTGACACTCCAG | + |
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Preference number: 2 (lower is better) Translates to: AGKAWGTQKGRNCPATVWCVFIS*PWLTLQ Trigger: CTGGAGTGTCAGCCATGGGCAGCTTATAAATACACA...CCAAACTGTGGCTGGACAGTTCCTACCTTTCTGTGTGCCCCAAGCCTTCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR CAA 90 bp | GGCTCACATGGACAGGTGCAGGTGGAGGACATAGCAGCAGCTATTTaGGTCCAGCTTTCTTTCCACAGACACACAATAGCCTTGGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: GSHGQVQVEDIAAAI*VQLSFHRHTIALAE Trigger: TTCAGCCAAGGCTATTGTGTGTCTGTGGAAAGAAAGCTGGACCAAAATAGCTGCTGCTATGTCCTCCACCTGCACCTGTCCATGTGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGGTCATTAAGGCCCCTACACGGATCCTGCCGAGATTTGTAGAAATGATAACAGCAGTAGGCCCATaGCGAGGCTGGCTTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: MVVIKAPTRILPRFVEMITAVGP*RGWLQS Trigger: TGACTGAAGCCAGCCTCGTCATGGGCCTACTGCTGT...TATCATTTCTACAAATCTCGGCAGGATCCGTGTAGGGGCCTTAATGACCACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR CAA 90 bp | ATGCTCATTGGCATGACTGAAGATAAACAAGAATTTCCCCACAGTTaGGAAATTGTTTACGAATGCACCAGAGGAGGTGGCAGGTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: MLIGMTEDKQEFPHS*EIVYECTRGGGRCC Trigger: GCAGCACCTGCCACCTCCTCTGGTGCATTCGTAAACAATTTCCAAACTGTGGGGAAATTCTTGTTTATCTTCAGTCATGCCAATGAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR TCA 90 bp | CATACTGTGCAAATGGTAGAGAGCAGGAGAAGGAGTAATAGATATGTAACTCTTCTTAAGAAAGGAAGTTaGGAAAGCTTGGAGGACCCA | + |
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Preference number: 2 (lower is better) Translates to: HTVQMVESRRRSNRYVTLLKKGS*ESLEDP Trigger: TGGGTCCTCCAAGCTTTCTCAACTTCCTTTCTTAAG...AAGAGTTACATATCTATTACTCCTTCTCCTGCTCTCTACCATTTGCACAGTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR TCA 90 bp | CATACTGTGCAAATGGTAGAGAGCAGGAGAAGGAGTAATAGATATGTAACTCTTAACACATACATTCTCTaGTGTCCATGTGTATTTGTG | + |
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Preference number: 2 (lower is better) Translates to: HTVQMVESRRRSNRYVTLNTYIL*CPCVFV Trigger: CACAAATACACATGGACATCAGAGAATGTATGTGTT...AAGAGTTACATATCTATTACTCCTTCTCCTGCTCTCTACCATTTGCACAGTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR TCA 72 bp | CTAGCCCTGCGGAGAAGGGGCAGGCAACTTGAGTCCTaGCCGAAGGGTAGGCAGGCAGAGGCAGGCAGACCA | + |
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Preference number: 3 (lower is better) Translates to: LALRRRGRQLES*PKGRQAEAGRP Trigger: TGGTCTGCCTGCCTCTGCCTGCCTACCCTTCGGTCAGGACTCAAGTTGCCTGCCCCTTCTCCGCAGGGCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR CCA 72 bp | GTCTGCAGCTCAGGTCTCATAACTCGCCCACCGCACTaGCACCAGGCCCCTTGTGTAGCCCCTGACTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: VCSSGLITRPPH*HQAPCVAPDSG Trigger: GCCAGAGTCAGGGGCTACACAAGGGGCCTGGTGCCAGTGCGGTGGGCGAGTTATGAGACCTGAGCTGCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR TCA 72 bp | GTGGGTGGCTACGCTGGACTCCAGGATGTAAGAGCCTaGCACTGCTTCCCTGCATGGGGTCTAGCCCTGCGG | + |
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Preference number: 3 (lower is better) Translates to: VGGYAGLQDVRA*HCFPAWGLALR Trigger: CCGCAGGGCTAGACCCCATGCAGGGAAGCAGTGTCAGGCTCTTACATCCTGGAGTCCAGCGTAGCCACCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR TCA 72 bp | ACGAGGCTGGCTTCAGTCAAGGGAGGATTGGAAGGCTaGGACGCTTGGCTAGGTGAGCAGGCAGGTGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: TRLASVKGGLEG*DAWLGEQAGGP Trigger: TGGCCCACCTGCCTGCTCACCTAGCCAAGCGTCTCAGCCTTCCAATCCTCCCTTGACTGAAGCCAGCCTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR GCA 72 bp | TGGACTCCAGGATGTAAGAGCCTGACACTGCTTCCCTaGATGGGGTCTAGCCCTGCGGAGAAGGGGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: WTPGCKSLTLLP*MGSSPAEKGQA Trigger: TGCCTGCCCCTTCTCCGCAGGGCTAGACCCCATGCAGGGAAGCAGTGTCAGGCTCTTACATCCTGGAGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR GCA 72 bp | AGGATACAGGAATCAGCCTCGGGAGCCACAAAGGCATaGATATGTCCCTCCCAGGAGGCTGCAGCTGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: RIQESASGATKA*ICPSQEAAAAG Trigger: CCCAGCAGCTGCAGCCTCCTGGGAGGGACATATGCATGCCTTTGTGGCTCCCGAGGCTGATTCCTGTATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR CCA 72 bp | CGGAACTTTCAGGCACAGCCACTCTGCCAGTTACCATaGAGGCACCACTGGAGGCCAGGTTATAGCCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: RNFQAQPLCQLP*RHHWRPGYSPA Trigger: TGCAGGGCTATAACCTGGCCTCCAGTGGTGCCTCCATGGTAACTGGCAGAGTGGCTGTGCCTGAAAGTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR CCA 72 bp | TTACGAATGCACCAGAGGAGGTGGCAGGTGCTGCTGTaGGCCAGCCCGTGGCCACTACCCAAATATTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: LRMHQRRWQVLL*ASPWPLPKYCC Trigger: ACAGCAATATTTGGGTAGTGGCCACGGGCTGGCCCACAGCAGCACCTGCCACCTCCTCTGGTGCATTCGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR-3UTR CAA 90 bp | GGGATCCGATGTTGGGGTTCAAGCTCCCTATGGTGGTCATTAAGGCCCCTACACGAAGGGGCAGGCAACTaGAGTCCTGACCGAAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: GIRCWGSSSLWWSLRPLHEGAGN*SPDRRV Trigger: TACCCTTCGGTCAGGACTCAAGTTGCCTGCCCCTTC...GTGTAGGGGCCTTAATGACCACCATAGGGAGCTTGAACCCCAACATCGGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| 3UTR TCA 72 bp | ACATCTGGACCACCTCCTAGTAGAGAGGCCCAAGCCTaGGCCTGGAGTTCCAGACTCTGTTATGGCACACCG | + |
|
Preference number: 3 (lower is better) Translates to: TSGPPPSREAQA*AWSSRLCYGTP Trigger: CGGTGTGCCATAACAGAGTCTGGAACTCCAGGCTCAGGCTTGGGCCTCTCTACTAGGAGGTGGTCCAGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR GCA 72 bp | GAAATTGTTTACGAATGCACCAGAGGAGGTGGCAGGTaGTGCTGTGGGCCAGCCCGTGGCCACTACCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: EIVYECTRGGGR*CCGPARGHYPN Trigger: ATTTGGGTAGTGGCCACGGGCTGGCCCACAGCAGCACCTGCCACCTCCTCTGGTGCATTCGTAAACAATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR CCA 72 bp | AAATTCAGCCAAGGGGGCCAATCTGGTCACCAGGAATaGGCTCTGCTGTCAGGGGTGGAAGCAGAAGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KFSQGGQSGHQE*ALLSGVEAEAQ Trigger: CTGAGCTTCTGCTTCCACCCCTGACAGCAGAGCCCATTCCTGGTGACCAGATTGGCCCCCTTGGCTGAATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR CCA 72 bp | CAGAATGACACAGCACAGCCCCATCTGTTTGACAGGTaGGATGGGGTCCCATTCCAGTCTGCAGCTCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QNDTAQPHLFDR*DGVPFQSAAQV Trigger: GACCTGAGCTGCAGACTGGAATGGGACCCCATCCCACCTGTCAAACAGATGGGGCTGTGCTGTGTCATTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR TCA 72 bp | AGCTGTAGCTTCGAGAATGGCACAGCAGTAGGCCCATaGCGAGGCTGGCTTCAGTCAAGGGAGGATTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SCSFENGTAVGP*RGWLQSREDWK Trigger: CTTCCAATCCTCCCTTGACTGAAGCCAGCCTCGTCATGGGCCTACTGCTGTGCCATTCTCGAAGCTACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| 3UTR GCA 72 bp | ATTGTTTACGAATGCACCAGAGGAGGTGGCAGGTGCTaGTGTGGGCCAGCCCGTGGCCACTACCCAAATATT | + |
|
Preference number: 3 (lower is better) Translates to: IVYECTRGGGRC*CGPARGHYPNI Trigger: AATATTTGGGTAGTGGCCACGGGCTGGCCCACAGCAGCACCTGCCACCTCCTCTGGTGCATTCGTAAACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR GCA 72 bp | AGGTGTGCTGGGGAGGTGCTTGGGCAGACACTGAAGTaGCCAGATGGGCAGAAAATGTTGACAGAACCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RCAGEVLGQTLK*PDGQKMLTEPA Trigger: AGCTGGTTCTGTCAACATTTTCTGCCCATCTGGGCACTTCAGTGTCTGCCCAAGCACCTCCCCAGCACACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR CCA 72 bp | TCTCTTGGGATCCGATGTTGGGGTTCAAGCTCCCTATaGTGGTCATTAAGGCCCCTACACGGATCCTGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: SLGIRCWGSSSL*WSLRPLHGSCR Trigger: TCGGCAGGATCCGTGTAGGGGCCTTAATGACCACCATAGGGAGCTTGAACCCCAACATCGGATCCCAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| 3UTR TCA 72 bp | GGAGGCCAACTCCCAGGCTACATGGGATCCATAGCCTaGAAAGGCAAAGGGCTGAGCTGCCACAAAATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGQLPGYMGSIA*KGKGLSCHKIQ Trigger: CTGAATTTTGTGGCAGCTCAGCCCTTTGCCTTTTCAGGCTATGGATCCCATGTAGCCTGGGAGTTGGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR GCA 72 bp | GAACTGTCCAGCCACAGTTTGGTGCACAACTCCATCTaGCTAGAAAGGCAAGCTCAAGCACCTGCAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ELSSHSLVHNSI*LERQAQAPAGE Trigger: CTCACCTGCAGGTGCTTGAGCTTGCCTTTCTAGGCAGATGGAGTTGTGCACCAAACTGTGGCTGGACAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR CCA 72 bp | TTCCAGACTCTGTTATGGCACACCGCATGGCTCACATaGACAGGTGCAGGTGGAGGACATAGCAGCAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FQTLLWHTAWLT*TGAGGGHSSSY Trigger: ATAGCTGCTGCTATGTCCTCCACCTGCACCTGTCCATGTGAGCCATGCGGTGTGCCATAACAGAGTCTGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGTTTGGTGCACAACTCCATCTGCCTAGAAAGGCAAGCTCAAGCACCTGCTCTTGGGATCCGATGTaGGGGTTCAAGCTCCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: PQFGAQLHLPRKASSSTCSWDPM*GFKLPM Trigger: CATAGGGAGCTTGAACCCCAACATCGGATCCCAAGA...GCAGGTGCTTGAGCTTGCCTTTCTAGGCAGATGGAGTTGTGCACCAAACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR CCA 72 bp | TGGGGAGGTGCTTGGGCAGACACTGAAGTGCCCAGATaGGCAGAAAATGTTGACAGAACCAGCTTACTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: WGGAWADTEVPR*AENVDRTSLLG Trigger: TCCTAGTAAGCTGGTTCTGTCAACATTTTCTGCCCATCTGGGCACTTCAGTGTCTGCCCAAGCACCTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTTGGGATCCGATGTTGGGGTTCAAGCTCCCTATGGTGGTCATTAAGGCCGAATCTGAGAACAGATaGTGGGTGGCTACGCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FSWDPMLGFKLPMVVIKAESENR*WVATLD Trigger: GTCCAGCGTAGCCACCCACAATCTGTTCTCAGATTC...GGCCTTAATGACCACCATAGGGAGCTTGAACCCCAACATCGGATCCCAAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACAGCCCCATCTGTTTGACAGGTGGGATGGGGTCCCATTCCAGTCTGCAGCTCAAAGTCTTCTAGTATaGAAAGGCCAACAGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: AQPHLFDRWDGVPFQSAAQSLLV*KGQQKP Trigger: AGGCTTCTGTTGGCCTTTCAATACTAGAAGACTTTG...AGCTGCAGACTGGAATGGGACCCCATCCCACCTGTCAAACAGATGGGGCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR CCA 72 bp | ATTAGGAATCTGAGAACAGATTGTGGGTGGCTACGCTaGACTCCAGGATGTAAGAGCCTGACACTGCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: IRNLRTDCGWLR*TPGCKSLTLLP Trigger: GGGAAGCAGTGTCAGGCTCTTACATCCTGGAGTCCAGCGTAGCCACCCACAATCTGTTCTCAGATTCCTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| 3UTR TCA 72 bp | GCAGAAAATGTTGACAGAACCAGCTTACTAGGATGTTaGCGATCTTTCCTGGAGACACCTACCCAGGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AENVDRTSLLGC*RSFLETPTQAC Trigger: GCAGGCCTGGGTAGGTGTCTCCAGGAAAGATCGTCAACATCCTAGTAAGCTGGTTCTGTCAACATTTTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR GCA 72 bp | TGTATTTGTGCTTGTGGGTGTGAGCCTAGGCGTGTGTaGATACGTCTGATGGTCCTAAAAGAGCAGAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CICACGCEPRRV*IRLMVLKEQKP Trigger: TGGCTTCTGCTCTTTTAGGACCATCAGACGTATGCACACACGCCTAGGCTCACACCCACAAGCACAAATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR TCA 72 bp | AGAGTCAGGCACAGGTTAGGGGCCACCATTTCCAAGTaGCCTCAGACCAACTATCTCAACACATACATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RVRHRLGATISK*PQTNYLNTYIL Trigger: GAGAATGTATGTGTTGAGATAGTTGGTCTGAGGTCACTTGGAAATGGTGGCCCCTAACCTGTGCCTGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR CCA 72 bp | TCTGGAATGATTAGGAATCTGAGAACAGATTGTGGGTaGCTACGCTGGACTCCAGGATGTAAGAGCCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: SGMIRNLRTDCG*LRWTPGCKSLT Trigger: TGTCAGGCTCTTACATCCTGGAGTCCAGCGTAGCCACCCACAATCTGTTCTCAGATTCCTAATCATTCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| 3UTR CCA 72 bp | TTAAGAAAGGAAGTTGAGAAAGCTTGGAGGACCCAGTaGTTTCAGCTTGCCACCCAGCTTATTCCAGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LRKEVEKAWRTQ*FQLATQLIPVL Trigger: GAGGACTGGAATAAGCTGGGTGGCAAGCTGAAACCACTGGGTCCTCCAAGCTTTCTCAACTTCCTTTCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR-3UTR CAA 90 bp | CATACTGTGCAAATGGTAGAGAGCAGGAGAAGGAGTAATAGATATGTAACTCTTGAAGGGGCAGGCAACTaGAGTCCTGACCGAAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: HTVQMVESRRRSNRYVTLEGAGN*SPDRRV Trigger: TACCCTTCGGTCAGGACTCAAGTTGCCTGCCCCTTC...AAGAGTTACATATCTATTACTCCTTCTCCTGCTCTCTACCATTTGCACAGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR CCA 72 bp | AAGTCTTCTAGTATTGAAAGGCCAACAGAAGCCTCCTaGACAGGCCTGTACTACTTCCAGAACTGTGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: KSSSIERPTEAS*TGLYYFQNCVF Trigger: AAATACACAGTTCTGGAAGTAGTACAGGCCTGTCCAGGAGGCTTCTGTTGGCCTTTCAATACTAGAAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR-3UTR CAA 90 bp | CATACTGTGCAAATGGTAGAGAGCAGGAGAAGGAGTAATAGATATGTAACTCTTGAATTTCCCCACAGTTaGGAAATTGTTTACGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: HTVQMVESRRRSNRYVTLEFPHS*EIVYEC Trigger: GCATTCGTAAACAATTTCCAAACTGTGGGGAAATTC...AAGAGTTACATATCTATTACTCCTTCTCCTGCTCTCTACCATTTGCACAGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTGGGCCTGCAGCAGGATGGTGGGTCTGGTACATCTGGACCACCTCCTATGTTGTTCGGGGCCTTaGGCACCAGGCCGGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSWACSRMVGLVHLDHLLCCSGP*APGRPS Trigger: AGACGGCCGGCCTGGTGCGCAAGGCCCCGAACAACA...TAGGAGGTGGTCCAGATGTACCAGACCCACCATCCTGCTGCAGGCCCAGCTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| CDS-3UTR GCA 90 bp | TGTTGGGGTTCAAGCTCCCTATGGTGGTCATTAAGGCCCCTACACGGATCCTGCGGCAGCCAGGCCGCCTaGAAGGGTGCCCATAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CWGSSSLWWSLRPLHGSCGSQAA*KGAHSC Trigger: GCAGCTATGGGCACCCTTGCAGGCGGCCTGGCTGCC...GCAGGATCCGTGTAGGGGCCTTAATGACCACCATAGGGAGCTTGAACCCCAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCAGAGGCAGGCAGACCAGACAGCAGCTGTAGCTTCGAGAATGGCACAGTTCCTTGATGCTCAGTaGCCTGCGGTCCTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRQRQADQTAAVASRMAQFLDAQ*PAVLLL Trigger: GAGGAGCAGGACCGCAGGGCACTGAGCATCAAGGAA...CTGTGCCATTCTCGAAGCTACAGCTGCTGTCTGGTCTGCCTGCCTCTGCCTGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTGGGCCTGCAGCAGGATGGTGGGTCTGGTACATCTGGACCACCTCCTACATCGGCATCACTGCTaGTGCCAGCACTGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSWACSRMVGLVHLDHLLHRHHC*CQHCPA Trigger: AGCTGGACAGTGCTGGCAGCAGCAGTGATGCCGATG...TAGGAGGTGGTCCAGATGTACCAGACCCACCATCCTGCTGCAGGCCCAGCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCAGAGGCAGGCAGACCAGACAGCAGCTGTAGCTTCGAGAATGGCACAGCATCGGCATCACTGCTaGTGCCAGCACTGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRQRQADQTAAVASRMAQHRHHC*CQHCPA Trigger: AGCTGGACAGTGCTGGCAGCAGCAGTGATGCCGATG...CTGTGCCATTCTCGAAGCTACAGCTGCTGTCTGGTCTGCCTGCCTCTGCCTGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTTAGCACCAGCCCCCATGCCTATAGATCACCCCTCACAGGCCTGCTAGCGTTCCTTGATGCTCAGTaGCCTGCGGTCCTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLSTSPHAYRSPLTGLLAFLDAQ*PAVLLL Trigger: GAGGAGCAGGACCGCAGGGCACTGAGCATCAAGGAA...CGCTAGCAGGCCTGTGAGGGGTGATCTATAGGCATGGGGGCTGGTGCTAAGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| CDS-3UTR GCA 90 bp | GCACAGCCCCATCTGTTTGACAGGTGGGATGGGGTCCCATTCCAGTCTGCAGCTAGTGCCCTGCGGTCCTaGTCCTCCAGTTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AQPHLFDRWDGVPFQSAASALRS*SSSFLM Trigger: CATCAAGAAACTGGAGGAGCAGGACCGCAGGGCACT...AGCTGCAGACTGGAATGGGACCCCATCCCACCTGTCAAACAGATGGGGCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGAAGCAGAAGCTCAGGTGCTGGAGATGGAGCAGGGAGTTGATAATCTAGGGGTACCAGCTGCTTaGGCTGCTCCAAGTAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVEAEAQVLEMEQGVDNLGVPAA*AAPSRA Trigger: GGCTCTACTTGGAGCAGCTCAAGCAGCTGGTACCCC...TAGATTATCAACTCCCTGCTCCATCTCCAGCACCTGAGCTTCTGCTTCCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| CDS-3UTR TCA 90 bp | TCAAGCTCCCTATGGTGGTCATTAAGGCCCCTACACGGATCCTGCCGAGATTTGGCTGAAGCTGTTCCTTaGTGCTCAGTGCCCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLWWSLRPLHGSCRDLAEAVP*CSVPCG Trigger: ACCGCAGGGCACTGAGCATCAAGGAACAGCTTCAGC...CAAATCTCGGCAGGATCCGTGTAGGGGCCTTAATGACCACCATAGGGAGCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| CDS-3UTR GCA 90 bp | ATTAGGAATCTGAGAACAGATTGTGGGTGGCTACGCTGGACTCCAGGATGTAAGTGTTGTTCGGGGCCTTaGGCACCAGGCCGGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRNLRTDCGWLRWTPGCKCCSGP*APGRPS Trigger: AGACGGCCGGCCTGGTGCGCAAGGCCCCGAACAACA...CTTACATCCTGGAGTCCAGCGTAGCCACCCACAATCTGTTCTCAGATTCCTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTGGTCATTAAGGCCCCTACACGGATCCTGCCGAGATTTGTAGAAATGATAGGCAGCCAGGCCGCCTaGAAGGGTGCCCATAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MVVIKAPTRILPRFVEMIGSQAA*KGAHSC Trigger: GCAGCTATGGGCACCCTTGCAGGCGGCCTGGCTGCC...TATCATTTCTACAAATCTCGGCAGGATCCGTGTAGGGGCCTTAATGACCACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGGAAGGCTTGGGGCACACAGAAAGGTAGGAACTGTCCAGCCACAGTTTGGCTTTGTTTTCTTCCTTaGGAAGTCGCCGTCGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGKAWGTQKGRNCPATVWLCFLP*EVAVEG Trigger: CCCTTCGACGGCGACTTCGCAAGGAAGAAAACAAAG...CCAAACTGTGGCTGGACAGTTCCTACCTTTCTGTGTGCCCCAAGCCTTCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| CDS-3UTR GCA 90 bp | CTTCAGTCCACTCCTTTCTCTTGGGATCCGATGTTGGGGTTCAAGCTCCCTATGAGTGCCCTGCGGTCCTaGTCCTCCAGTTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LQSTPFSWDPMLGFKLPMSALRS*SSSFLM Trigger: CATCAAGAAACTGGAGGAGCAGGACCGCAGGGCACT...CATAGGGAGCTTGAACCCCAACATCGGATCCCAAGAGAAAGGAGTGGACTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| 3UTR CAA 72 bp | AAGTTGAGAAAGCTTGGAGGACCCAGTGGTTTCAGCTaGCCACCCAGCTTATTCCAGTCCTCTGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRKLGGPSGFS*PPSLFQSSARK Trigger: CTTCCTGGCAGAGGACTGGAATAAGCTGGGTGGCAAGCTGAAACCACTGGGTCCTCCAAGCTTTCTCAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| CDS-3UTR TCA 90 bp | ATGGTGGTCATTAAGGCCCCTACACGGATCCTGCCGAGATTTGTAGAAATGATAGGGGTACCAGCTGCTTaGGCTGCTCCAAGTAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MVVIKAPTRILPRFVEMIGVPAA*AAPSRA Trigger: GGCTCTACTTGGAGCAGCTCAAGCAGCTGGTACCCC...TATCATTTCTACAAATCTCGGCAGGATCCGTGTAGGGGCCTTAATGACCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTTGGGATCCGATGTTGGGGTTCAAGCTCCCTATGGTGGTCATTAAGGCCCCTTTGTTTTCTTCCTTaGGAAGTCGCCGTCGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGIRCWGSSSLWWSLRPLCFLP*EVAVEG Trigger: CCCTTCGACGGCGACTTCGCAAGGAAGAAAACAAAG...GGGCCTTAATGACCACCATAGGGAGCTTGAACCCCAACATCGGATCCCAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTTAGCACCAGCCCCCATGCCTATAGATCACCCCTCACAGGCCTGCTAGCGAGTTTAGCTCGTCTGTaGTTTTCTAGTTCGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLSTSPHAYRSPLTGLLASLARL*FSSSLC Trigger: ACACAACGAACTAGAAAAGCACAGACGAGCTAAACT...CGCTAGCAGGCCTGTGAGGGGTGATCTATAGGCATGGGGGCTGGTGCTAAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| CDS-3UTR GCA 90 bp | ATTAGGAATCTGAGAACAGATTGTGGGTGGCTACGCTGGACTCCAGGATGTAAGCAGGGCCAAACTCCATaGCCTCTATATCCACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IRNLRTDCGWLRWTPGCKQGQTP*PLYPPL Trigger: AAGAGGTGGATATAGAGGGCATGGAGTTTGGCCCTG...CTTACATCCTGGAGTCCAGCGTAGCCACCCACAATCTGTTCTCAGATTCCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
||
| CDS-3UTR TCA 90 bp | ACTATCTCAACACATACATTCTCTGATGTCCATGTGTATTTGTGCTTGTGGGTGGCTGAAGCTGTTCCTTaGTGCTCAGTGCCCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TISTHTFSDVHVYLCLWVAEAVP*CSVPCG Trigger: ACCGCAGGGCACTGAGCATCAAGGAACAGCTTCAGC...CACCCACAAGCACAAATACACATGGACATCAGAGAATGTATGTGTTGAGATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| CDS-3UTR TCA 90 bp | ACTATCTCAACACATACATTCTCTGATGTCCATGTGTATTTGTGCTTGTGGGTGAAGCGATGTTCCCGCTaGAGCTGTTCCTTGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TISTHTFSDVHVYLCLWVKRCSR*SCSLML Trigger: GAGCATCAAGGAACAGCTTCAGCGGGAACATCGCTT...CACCCACAAGCACAAATACACATGGACATCAGAGAATGTATGTGTTGAGATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| CDS-3UTR GCA 90 bp | ACTATCTCAACACATACATTCTCTGATGTCCATGTGTATTTGTGCTTGTGGGTGCAGGGCCAAACTCCATaGCCTCTATATCCACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TISTHTFSDVHVYLCLWVQGQTP*PLYPPL Trigger: AAGAGGTGGATATAGAGGGCATGGAGTTTGGCCCTG...CACCCACAAGCACAAATACACATGGACATCAGAGAATGTATGTGTTGAGATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR CAA 72 bp | CTGAAGATAAACAAGAATTTCCCCACAGTTTGGAAATaGTTTACGAATGCACCAGAGGAGGTGGCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKINKNFPTVWK*FTNAPEEVAGA Trigger: AGCACCTGCCACCTCCTCTGGTGCATTCGTAAACAATTTCCAAACTGTGGGGAAATTCTTGTTTATCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
||
| 3UTR CAA 72 bp | GGCATGACTGAAGATAAACAAGAATTTCCCCACAGTTaGGAAATTGTTTACGAATGCACCAGAGGAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GMTEDKQEFPHS*EIVYECTRGGG Trigger: GCCACCTCCTCTGGTGCATTCGTAAACAATTTCCAAACTGTGGGGAAATTCTTGTTTATCTTCAGTCATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| 3UTR CAA 72 bp | CATACAGGAAATAGAGGCAGCACACACTCATGTCCCTaGGCGAGTCTTCAGAGCTTTTCTCTCTTTTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: HTGNRGSTHSCP*ASLQSFSLFLK Trigger: TTTTAAAAAGAGAGAAAAGCTCTGAAGACTCGCCAAGGGACATGAGTGTGTGCTGCCTCTATTTCCTGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| CDS GCA 90 bp | GTTCGGGGCCTTGCGCACCAGGCCGGCCGTCTTTGTTTTCTTCCTTaGGAAGTCGCCGTCGAAGGGCAGCACGGAGGCGTAGCCGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: VRGLAHQAGRLCFLP*EVAVEGQHGGVAVL Trigger: GAGCACGGCTACGCCTCCGTGCTGCCCTTCGACGGCGACTTCGCAAGGAAGAAAACAAAGACGGCCGGCCTGGTGCGCAAGGCCCCGAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS GCA 90 bp | CAGGGCAGCCAGGCCGCCTGCAAGGGTGCCCATAGCTGCTGTCGCTaGAGCCACTGCTCTGTAGGCTGTAGTGGTCATCGGCATCACTGC | + |
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Preference number: 5 (lower is better) Translates to: QGSQAACKGAHSCCR*SHCSVGCSGHRHHC Trigger: GCAGTGATGCCGATGACCACTACAGCCTACAGAGCAGTGGCTGCAGCGACAGCAGCTATGGGCACCCTTGCAGGCGGCCTGGCTGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS-3UTR CAA 90 bp | GCACAGCCCCATCTGTTTGACAGGTGGGATGGGGTCCCATTCCAGTCTGCAGCTCTGTTGTTCGGGGCCTaGCGCACCAGGCCGGCCGTC | + |
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Preference number: 5 (lower is better) Translates to: AQPHLFDRWDGVPFQSAALLFGA*RTRPAV Trigger: GACGGCCGGCCTGGTGCGCAAGGCCCCGAACAACAG...AGCTGCAGACTGGAATGGGACCCCATCCCACCTGTCAAACAGATGGGGCTGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| CDS GCA 90 bp | CAGGCCGCCTGCAAGGGTGCCCATAGCTGCTGTCGCTGCAGCCACTaGTCTGTAGGCTGTAGTGGTCATCGGCATCACTGCTGCTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: QAACKGAHSCCRCSH*SVGCSGHRHHCCCQ Trigger: CTGGCAGCAGCAGTGATGCCGATGACCACTACAGCCTACAGAGCAGTGGCTGCAGCGACAGCAGCTATGGGCACCCTTGCAGGCGGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS GCA 90 bp | TGCAGCCACTGCTCTGTAGGCTGTAGTGGTCATCGGCATCACTGCTaGTGCCAGCACTGTCCAGCTCCCCAGGGCCAAACTCCATGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSHCSVGCSGHRHHC*CQHCPAPQGQTPCP Trigger: AGGGCATGGAGTTTGGCCCTGGGGAGCTGGACAGTGCTGGCAGCAGCAGTGATGCCGATGACCACTACAGCCTACAGAGCAGTGGCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS-3UTR CAA 90 bp | GCACAGCCCCATCTGTTTGACAGGTGGGATGGGGTCCCATTCCAGTCTGCAGCTCCAGGCCGGCCGTCTTaGTTTTCTTCCTTGCGAAGT | + |
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Preference number: 5 (lower is better) Translates to: AQPHLFDRWDGVPFQSAAPGRPS*FSSLRS Trigger: ACTTCGCAAGGAAGAAAACAAAGACGGCCGGCCTGG...AGCTGCAGACTGGAATGGGACCCCATCCCACCTGTCAAACAGATGGGGCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| CDS-3UTR CAA 90 bp | GGCAGGCAGAGGCAGGCAGACCAGACAGCAGCTGTAGCTTCGAGAATGGCACAGTCTTTGTTTTCTTCCTaGCGAAGTCGCCGTCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: GRQRQADQTAAVASRMAQSLFSS*RSRRRR Trigger: CCTTCGACGGCGACTTCGCAAGGAAGAAAACAAAGA...CTGTGCCATTCTCGAAGCTACAGCTGCTGTCTGGTCTGCCTGCCTCTGCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS-3UTR CAA 90 bp | GGGATCCGATGTTGGGGTTCAAGCTCCCTATGGTGGTCATTAAGGCCCCTACACAGTTTAGCTCGTCTGTaGTTCGGGGCCTTGCGCACC | + |
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Preference number: 5 (lower is better) Translates to: GIRCWGSSSLWWSLRPLHSLARL*FGALRT Trigger: GGTGCGCAAGGCCCCGAACAACAGACGAGCTAAACT...GTGTAGGGGCCTTAATGACCACCATAGGGAGCTTGAACCCCAACATCGGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119171.2 |
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| CDS TCA 90 bp | ACTGATAGCTGCTCCAAACGTCTCTTTAGGAAGCGATGTTCCCGCTaGAGCTGTTCCTTGATGCTCAGTGCCCTGCGGTCCTGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TDSCSKRLFRKRCSR*SCSLMLSALRSCSS Trigger: GGAGGAGCAGGACCGCAGGGCACTGAGCATCAAGGAACAGCTTCAGCGGGAACATCGCTTCCTAAAGAGACGTTTGGAGCAGCTATCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS GCA 90 bp | CTTGCTCTGAGTCATCTGTGGACACAGCAGAGCCAGTGCTGTCTGTaGGCACACGCTCTACACTCTGCACTGATAGCTGCTCCAAACGTC | + |
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Preference number: 5 (lower is better) Translates to: LALSHLWTQQSQCCL*AHALHSALIAAPNV Trigger: GACGTTTGGAGCAGCTATCAGTGCAGAGTGTAGAGCGTGTGCGCACAGACAGCACTGGCTCTGCTGTGTCCACAGATGACTCAGAGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS GCA 90 bp | GACACAGCAGAGCCAGTGCTGTCTGTGCGCACACGCTCTACACTCTaGACTGATAGCTGCTCCAAACGTCTCTTTAGGAAGCGATGTTCC | + |
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Preference number: 5 (lower is better) Translates to: DTAEPVLSVRTRSTL*TDSCSKRLFRKRCS Trigger: GGAACATCGCTTCCTAAAGAGACGTTTGGAGCAGCTATCAGTGCAGAGTGTAGAGCGTGTGCGCACAGACAGCACTGGCTCTGCTGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS GCA 90 bp | TATCCACCTCTTGCTCTGAGTCATCTGTGGACACAGCAGAGCCAGTaGTGTCTGTGCGCACACGCTCTACACTCTGCACTGATAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YPPLALSHLWTQQSQ*CLCAHALHSALIAA Trigger: AGCAGCTATCAGTGCAGAGTGTAGAGCGTGTGCGCACAGACAGCACTGGCTCTGCTGTGTCCACAGATGACTCAGAGCAAGAGGTGGATA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS-3UTR CAA 90 bp | TCAAGCTCCCTATGGTGGTCATTAAGGCCCCTACACGGATCCTGCCGAGATTTGCCAGGCCGGCCGTCTTaGTTTTCTTCCTTGCGAAGT | + |
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Preference number: 5 (lower is better) Translates to: SSSLWWSLRPLHGSCRDLPGRPS*FSSLRS Trigger: ACTTCGCAAGGAAGAAAACAAAGACGGCCGGCCTGG...CAAATCTCGGCAGGATCCGTGTAGGGGCCTTAATGACCACCATAGGGAGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS-3UTR CAA 90 bp | AGGCAGGCAGAGGCAGGCAGACCAGACAGCAGCTGTAGCTTCGAGAATGGCACATGCTTTTCTAGTTCGTaGTGTGAAGACCTGTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: RQAEAGRPDSSCSFENGTCFSSS*CEDLLF Trigger: GAACAACAGGTCTTCACACAACGAACTAGAAAAGCA...TGTGCCATTCTCGAAGCTACAGCTGCTGTCTGGTCTGCCTGCCTCTGCCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| CDS-3UTR CAA 90 bp | TCTCTTGGGATCCGATGTTGGGGTTCAAGCTCCCTATGGTGGTCATTAAGGCCCTGCTCCTCCAGTTTCTaGATGTGCATCTTAGCACGC | + |
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Preference number: 5 (lower is better) Translates to: SLGIRCWGSSSLWWSLRPCSSSF*MCILAR Trigger: GCGTGCTAAGATGCACATCAAGAAACTGGAGGAGCA...GGGCCTTAATGACCACCATAGGGAGCTTGAACCCCAACATCGGATCCCAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS-3UTR CAA 90 bp | ATGGTGGTCATTAAGGCCCCTACACGGATCCTGCCGAGATTTGTAGAAATGATATTGTGTGAAGACCTGTaGTTCGGGGCCTTGCGCACC | + |
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Preference number: 5 (lower is better) Translates to: MVVIKAPTRILPRFVEMILCEDL*FGALRT Trigger: GGTGCGCAAGGCCCCGAACAACAGGTCTTCACACAA...TATCATTTCTACAAATCTCGGCAGGATCCGTGTAGGGGCCTTAATGACCACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| CDS-3UTR CAA 90 bp | ATGGTGGTCATTAAGGCCCCTACACGGATCCTGCCGAGATTTGTAGAAATGATATGCTCCTCCAGTTTCTaGATGTGCATCTTAGCACGC | + |
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Preference number: 5 (lower is better) Translates to: MVVIKAPTRILPRFVEMICSSSF*MCILAR Trigger: GCGTGCTAAGATGCACATCAAGAAACTGGAGGAGCA...TATCATTTCTACAAATCTCGGCAGGATCCGTGTAGGGGCCTTAATGACCACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS-3UTR CAA 90 bp | CATACTGTGCAAATGGTAGAGAGCAGGAGAAGGAGTAATAGATATGTAACTCTTTCTTTGTTTTCTTCCTaGCGAAGTCGCCGTCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: HTVQMVESRRRSNRYVTLSLFSS*RSRRRR Trigger: CCTTCGACGGCGACTTCGCAAGGAAGAAAACAAAGA...AAGAGTTACATATCTATTACTCCTTCTCCTGCTCTCTACCATTTGCACAGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| CDS CAA 90 bp | TGTTCGGGGCCTTGCGCACCAGGCCGGCCGTCTTTGTTTTCTTCCTaGCGAAGTCGCCGTCGAAGGGCAGCACGGAGGCGTAGCCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: CSGPCAPGRPSLFSS*RSRRRRAARRRSRA Trigger: AGCACGGCTACGCCTCCGTGCTGCCCTTCGACGGCGACTTCGCAAGGAAGAAAACAAAGACGGCCGGCCTGGTGCGCAAGGCCCCGAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS GCA 72 bp | CAGGCCGCCTGCAAGGGTGCCCATAGCTGCTGTCGCTaGAGCCACTGCTCTGTAGGCTGTAGTGGTCATCGG | + |
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Preference number: 6 (lower is better) Translates to: QAACKGAHSCCR*SHCSVGCSGHR Trigger: CCGATGACCACTACAGCCTACAGAGCAGTGGCTGCAGCGACAGCAGCTATGGGCACCCTTGCAGGCGGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS CAA 72 bp | CCTTGCGCACCAGGCCGGCCGTCTTTGTTTTCTTCCTaGCGAAGTCGCCGTCGAAGGGCAGCACGGAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: PCAPGRPSLFSS*RSRRRRAARRR Trigger: ACGCCTCCGTGCTGCCCTTCGACGGCGACTTCGCAAGGAAGAAAACAAAGACGGCCGGCCTGGTGCGCAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS CAA 90 bp | GTGAAGACCTGTTGTTCGGGGCCTTGCGCACCAGGCCGGCCGTCTTaGTTTTCTTCCTTGCGAAGTCGCCGTCGAAGGGCAGCACGGAGG | + |
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Preference number: 6 (lower is better) Translates to: VKTCCSGPCAPGRPS*FSSLRSRRRRAARR Trigger: CCTCCGTGCTGCCCTTCGACGGCGACTTCGCAAGGAAGAAAACAAAGACGGCCGGCCTGGTGCGCAAGGCCCCGAACAACAGGTCTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| CDS GCA 72 bp | CTTGCGCACCAGGCCGGCCGTCTTTGTTTTCTTCCTTaGGAAGTCGCCGTCGAAGGGCAGCACGGAGGCGTA | + |
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Preference number: 6 (lower is better) Translates to: LAHQAGRLCFLP*EVAVEGQHGGV Trigger: TACGCCTCCGTGCTGCCCTTCGACGGCGACTTCGCAAGGAAGAAAACAAAGACGGCCGGCCTGGTGCGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS CAA 72 bp | TGTTGTTCGGGGCCTTGCGCACCAGGCCGGCCGTCTTaGTTTTCTTCCTTGCGAAGTCGCCGTCGAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: CCSGPCAPGRPS*FSSLRSRRRRA Trigger: TGCCCTTCGACGGCGACTTCGCAAGGAAGAAAACAAAGACGGCCGGCCTGGTGCGCAAGGCCCCGAACAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS GCA 72 bp | GCGATGTTCCCGCTGAAGCTGTTCCTTGATGCTCAGTaGCCTGCGGTCCTGCTCCTCCAGTTTCTTGATGTG | + |
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Preference number: 6 (lower is better) Translates to: AMFPLKLFLDAQ*PAVLLLQFLDV Trigger: CACATCAAGAAACTGGAGGAGCAGGACCGCAGGGCACTGAGCATCAAGGAACAGCTTCAGCGGGAACATCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS TCA 72 bp | TGCTCCAAACGTCTCTTTAGGAAGCGATGTTCCCGCTaGAGCTGTTCCTTGATGCTCAGTGCCCTGCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CSKRLFRKRCSR*SCSLMLSALRS Trigger: GGACCGCAGGGCACTGAGCATCAAGGAACAGCTTCAGCGGGAACATCGCTTCCTAAAGAGACGTTTGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS GCA 72 bp | CTAGTTCGTTGTGTGAAGACCTGTTGTTCGGGGCCTTaGGCACCAGGCCGGCCGTCTTTGTTTTCTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LVRCVKTCCSGP*APGRPSLFSSL Trigger: CAAGGAAGAAAACAAAGACGGCCGGCCTGGTGCGCAAGGCCCCGAACAACAGGTCTTCACACAACGAACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042701.13 |
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| CDS GCA 72 bp | AGTCATCTGTGGACACAGCAGAGCCAGTGCTGTCTGTaGGCACACGCTCTACACTCTGCACTGATAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SHLWTQQSQCCL*AHALHSALIAA Trigger: AGCAGCTATCAGTGCAGAGTGTAGAGCGTGTGCGCACAGACAGCACTGGCTCTGCTGTGTCCACAGATGACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS GCA 72 bp | AGTGCCCTGCGGTCCTGCTCCTCCAGTTTCTTGATGTaGATCTTAGCACGCTTCAGAAGGCTCAGAGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SALRSCSSSFLM*ILARFRRLRVV Trigger: CACTACTCTGAGCCTTCTGAAGCGTGCTAAGATGCACATCAAGAAACTGGAGGAGCAGGACCGCAGGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS GCA 72 bp | TCTGTGCGCACACGCTCTACACTCTGCACTGATAGCTaGTCCAAACGTCTCTTTAGGAAGCGATGTTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SVRTRSTLCTDS*SKRLFRKRCSR Trigger: GCGGGAACATCGCTTCCTAAAGAGACGTTTGGAGCAGCTATCAGTGCAGAGTGTAGAGCGTGTGCGCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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| CDS GCA 72 bp | GAGCCAGTGCTGTCTGTGCGCACACGCTCTACACTCTaGACTGATAGCTGCTCCAAACGTCTCTTTAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: EPVLSVRTRSTL*TDSCSKRLFRK Trigger: CTTCCTAAAGAGACGTTTGGAGCAGCTATCAGTGCAGAGTGTAGAGCGTGTGCGCACAGACAGCACTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042701.13 ENSMUST00000119171.2 |
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