Pregenerated sensors for MX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023341Ensembl transcript IDs: ENSMUST00000024112.8, ENSMUST00000188251.7, ENSMUST00000190447.8
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCAAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTaGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: GKKSTQGEAVVLLAK*LPLPIYLLSFESLF Trigger: AAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| 3UTR TCA 90 bp | ATTTCTAGCAGTGTGCTAAATGGTGGGCAAGAAGAGTACTCAGGGTaGAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTA | + |
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Preference number: 1 (lower is better) Translates to: ISSSVLNGGQEEYSG*SRCLISKVASSTHL Trigger: TAGATGGGTAGAGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCCCACCATTTAGCACACTGCTAGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| 3UTR-3UTR TCA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCGAGCCCTTCTGTCCCTaGATCACAATCCAGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: VLLAKWLPLPIYLLSFESEPFCP*ITIQET Trigger: TGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTC...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| 3UTR-3UTR TCA 90 bp | GGCAAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTTACCCATCTACTTGCTaGGCTTTGAGAGCCTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: GKKSTQGEAVVLLAKWLPYPSTC*ALRASF Trigger: GAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTA...AGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCATAGAGCCCTTCTGTCCCTaGATCACAATCCAGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: QSEQKAPSNLSASTYQSIEPFCP*ITIQET Trigger: TGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTC...TATGCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAAAGTGGTTTATTAAGGAATGCAACAGGCAGCTCCCATTTGTACATCAAGTCTTATTAGCAAAGTaGCTTCCTCTACCCATCTAC | + |
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Preference number: 2 (lower is better) Translates to: KEKWFIKECNRQLPFVHQVLLAK*LPLPIY Trigger: GTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC...TTGATGTACAAATGGGAGCTGCCTGTTGCATTCCTTAATAAACCACTTTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| 3UTR TCA 72 bp | TATAGCTACCAGGAAAGGCAGGAGCCCTTCTGTCCCTaGATCACAATCCAGGAAACACAGGGAAGGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: YSYQERQEPFCP*ITIQETQGRTE Trigger: CTCTGTCCTTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCTGGTAGCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| 3UTR TCA 72 bp | AGTGTGCTAAATGGTGGGCAAGAAGAGTACTCAGGGTaGAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: SVLNGGQEEYSG*SRCLISKVASS Trigger: AGAGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCCCACCATTTAGCACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | AGGAAAGGCAGGAGCCCTTCTGTCCCTGAATCACAATCCAGGAAACACAGGGAAAGCCGGCGCCGAGCCTaGGCCAGCCTTGCCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RKGRSPSVPESQSRKHRESRRRA*ASLASL Trigger: GAGGCTGGCAAGGCTGGCCCAGGCTCGGCGCCGGCT...TTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | GGCAAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTAGCCGGCGCCGAGCCTaGGCCAGCCTTGCCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GKKSTQGEAVVLLAKWLPSRRRA*ASLASL Trigger: GAGGCTGGCAAGGCTGGCCCAGGCTCGGCGCCGGCT...AGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | AGGAAAGGCAGGAGCCCTTCTGTCCCTGAATCACAATCCAGGAAACACAGGGAATTGTCCTGCAGGAGCTaGAGCATGCCCTTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RKGRSPSVPESQSRKHRELSCRS*SMPFCS Trigger: GCTGCAGAAGGGCATGCTCCAGCTCCTGCAGGACAA...TTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR GCA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCCCACCTCCTGAGCCATaGTCAGAGCCTCTGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: KWLPLPIYLLSFESLFLFPPPEP*SEPLWW Trigger: CCACCACAGAGGCTCTGAGCATGGCTCAGGAGGTGG...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR GCA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCTGCGGTCAGTCTCTCTaGCAGGCAGGGCACTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VLLAKWLPLPIYLLSFESCGQSL*QAGHCG Trigger: GCCACAGTGCCCTGCCTGGCAGAGAGACTGACCGCA...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR GCA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCGAACGTGGCTGGAGATaGGGTTGTGAGCCTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KWLPLPIYLLSFESLFLFERGWR*GCEPPG Trigger: GCCAGGAGGCTCACAACCGCATCTCCAGCCACGTTC...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | GGCAAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCAGCTTCCTCCTCTCTaGCCTTCTGCAAGGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GKKSTQGEAVVLLAKWLPQLPPL*PSARLL Trigger: GAGGAGCCTTGCAGAAGGTCAGAGAGGAGGAAGCTG...AGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR GCA 90 bp | AAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCTATGCGGTCAGTCTCTCTaGCAGGCAGGGCACTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KKSTQGEAVVLLAKWLPLCGQSL*QAGHCG Trigger: GCCACAGTGCCCTGCCTGGCAGAGAGACTGACCGCA...TAGAGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR GCA 90 bp | AGGAAAGGCAGGAGCCCTTCTGTCCCTGAATCACAATCCAGGAAACACAGGGAAGCGACATTCTCCCTCTaGCACATTCTCTTCCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RKGRSPSVPESQSRKHREATFSL*HILFPL Trigger: CAAGGGGAAGAGAATGTGGCAGAGGGAGAATGTCGC...TTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR GCA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCAGCCTGGGCCAGCCTTaGCAGCCTCTCCTTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VLLAKWLPLPIYLLSFESSLGQP*QPLLQE Trigger: TTCCTGAAGGAGAGGCTGGCAAGGCTGGCCCAGGCT...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | TCTCAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCCCAGGCAGGGCACTGTaGCCTTCCCATCCTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SQSEQKAPSNLSASTYQSPGRAL*PSHPPE Trigger: TTCTGGAGGATGGGAAGGCCACAGTGCCCTGCCTGG...GCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCCAGAGGGCATCTGGTaGCAATACCACTGCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLLAKWLPLPIYLLSFESPEGIW*QYHCLW Trigger: CCAGAGGCAGTGGTATTGTCACCAGATGCCCTCTGG...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | AGGAAAGGCAGGAGCCCTTCTGTCCCTGAATCACAATCCAGGAAACACAGGGAATCTTGGATGTCCTGCTaGCCTCTGCACTTGACTATC | + |
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Preference number: 4 (lower is better) Translates to: RKGRSPSVPESQSRKHRESWMSC*PLHLTI Trigger: GATAGTCAAGTGCAGAGGTCAGCAGGACATCCAAGA...TTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | AAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCTACCAGGCAGGGCACTGTaGCCTTCCCATCCTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: KKSTQGEAVVLLAKWLPLPGRAL*PSHPPE Trigger: TTCTGGAGGATGGGAAGGCCACAGTGCCCTGCCTGG...TAGAGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | AGGAAAGGCAGGAGCCCTTCTGTCCCTGAATCACAATCCAGGAAACACAGGGAAAGATTTACAGATGTGTaGGATGAGCTCTGCGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: RKGRSPSVPESQSRKHRERFTDV*DELCGQ Trigger: CTGACCGCAGAGCTCATCTCACACATCTGTAAATCT...TTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | GGCAAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCTTTTCGGAGCCTGGTaGATAGGCGACATTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GKKSTQGEAVVLLAKWLPLFGAW*IGDILP Trigger: AGGGAGAATGTCGCCTATTCACCAGGCTCCGAAAAG...AGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | AAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCTACAGCTTCCTCCTCTCTaGCCTTCTGCAAGGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KKSTQGEAVVLLAKWLPLQLPPL*PSARLL Trigger: GAGGAGCCTTGCAGAAGGTCAGAGAGGAGGAAGCTG...TAGAGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCCTCTTCCCAGAACTCTaGTCCCCAATGACAGCGATG | + |
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Preference number: 4 (lower is better) Translates to: KWLPLPIYLLSFESLFLFLFPEL*SPMTAM Trigger: CATCGCTGTCATTGGGGACCAGAGTTCTGGGAAGAG...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | AAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCTATTGTCCTGCAGGAGCTaGAGCATGCCCTTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KKSTQGEAVVLLAKWLPLLSCRS*SMPFCS Trigger: GCTGCAGAAGGGCATGCTCCAGCTCCTGCAGGACAA...TAGAGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCCTCCACTGGGTAAGTTaGCTGAATCAACGCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: KWLPLPIYLLSFESLFLFLHWVS*LNQRLC Trigger: ACACAGGCGTTGATTCAGTCAACTTACCCAGTGGAG...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | TCTCAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCGGACCACCACCAGGTTaGTGGTCTCCTGTTTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: SQSEQKAPSNLSASTYQSGPPPG*WSPVFG Trigger: TCCAAAAACAGGAGACCATCAACCTGGTGGTGGTCC...GCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTCCCAGAACTCTaGTCCCCAATGACAGCGATG | + |
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Preference number: 4 (lower is better) Translates to: VLLAKWLPLPIYLLSFESLFPEL*SPMTAM Trigger: CATCGCTGTCATTGGGGACCAGAGTTCTGGGAAGAG...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | CAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCATACAGGTCTGGGACATTTaGGGAGCTGACATCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QSEQKAPSNLSASTYQSIQVWDI*GADIQA Trigger: AGCCTGGATGTCAGCTCCCCAAATGTCCCAGACCTG...TATGCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | AAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCTAGGACCACCACCAGGTTaGTGGTCTCCTGTTTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: KKSTQGEAVVLLAKWLPLGPPPG*WSPVFG Trigger: TCCAAAAACAGGAGACCATCAACCTGGTGGTGGTCC...TAGAGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | GGCAAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTTGTAAATCTTGGGACTaGGAGGAACTGGAAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GKKSTQGEAVVLLAKWLPCKSWD*EELEVP Trigger: TGGCACTTCCAGTTCCTCTCAGTCCCAAGATTTACA...AGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCTTGTTCACAGACTCCTaGTCTTTCTCTCCTAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: KWLPLPIYLLSFESLFLFLFTDS*SFSPRP Trigger: TGGCCTAGGAGAGAAAGACCAGGAGTCTGTGAACAA...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | TCTCAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCAATGAGAGTCAGGTCTaGGACATTTGGGGAGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: SQSEQKAPSNLSASTYQSNESQV*DIWGAD Trigger: GTCAGCTCCCCAAATGTCCCAGACCTGACTCTCATT...GCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | AGGAAAGGCAGGAGCCCTTCTGTCCCTGAATCACAATCCAGGAAACACAGGGAAGTAATTCACAAACCCTaGCAATTCTCGTCCACGATA | + |
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Preference number: 4 (lower is better) Translates to: RKGRSPSVPESQSRKHREVIHKP*QFSSTI Trigger: TATCGTGGACGAGAATTGCCAGGGTTTGTGAATTAC...TTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | AGGAAAGGCAGGAGCCCTTCTGTCCCTGAATCACAATCCAGGAAACACAGGGAACAGCATTTCTATAGCTaGCTCTTCCAGGGTTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: RKGRSPSVPESQSRKHREQHFYS*LFQGFD Trigger: ATCAAAACCCTGGAAGAGCCAGCTATAGAAATGCTG...TTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | CAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCATACTCCACTGGGTAAGTTaGCTGAATCAACGCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: QSEQKAPSNLSASTYQSILHWVS*LNQRLC Trigger: ACACAGGCGTTGATTCAGTCAACTTACCCAGTGGAG...TATGCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCAAGATTTGCTCATTCTaGAGAGCCTCAGTCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VLLAKWLPLPIYLLSFESKICSF*RASVRL Trigger: GAGCCTGACTGAGGCTCTTCAGAATGAGCAAATCTT...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | TCTCAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCAAGATTTGCTCATTCTaGAGAGCCTCAGTCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SQSEQKAPSNLSASTYQSKICSF*RASVRL Trigger: GAGCCTGACTGAGGCTCTTCAGAATGAGCAAATCTT...GCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCTGTAAATCTTGGGACTaGGAGGAACTGGAAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VLLAKWLPLPIYLLSFESCKSWD*EELEVP Trigger: TGGCACTTCCAGTTCCTCTCAGTCCCAAGATTTACA...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR GCA 90 bp | GGCAAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTGAGAGGAACTGGAAGTaGCATGCTTTGTCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GKKSTQGEAVVLLAKWLPERNWK*HALSSS Trigger: AGAAGAAGACAAAGCATGGCACTTCCAGTTCCTCTC...AGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR GCA 90 bp | AAAGAAAAGTGGTTTATTAAGGAATGCAACAGGCAGCTCCCATTTGTACATCAAGAACGTGGCTGGAGATaGGGTTGTGAGCCTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KEKWFIKECNRQLPFVHQERGWR*GCEPPG Trigger: GCCAGGAGGCTCACAACCGCATCTCCAGCCACGTTC...TTGATGTACAAATGGGAGCTGCCTGTTGCATTCCTTAATAAACCACTTTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR GCA 90 bp | AAAGAAAAGTGGTTTATTAAGGAATGCAACAGGCAGCTCCCATTTGTACATCAAAGCCTGGGCCAGCCTTaGCAGCCTCTCCTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KEKWFIKECNRQLPFVHQSLGQP*QPLLQE Trigger: TTCCTGAAGGAGAGGCTGGCAAGGCTGGCCCAGGCT...TTGATGTACAAATGGGAGCTGCCTGTTGCATTCCTTAATAAACCACTTTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CCA 90 bp | TCTCAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCTTGTTCACAGACTCCTaGTCTTTCTCTCCTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQSEQKAPSNLSASTYQSLFTDS*SFSPRP Trigger: TGGCCTAGGAGAGAAAGACCAGGAGTCTGTGAACAA...GCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCTAAATGAGAGTCAGGTCTaGGACATTTGGGGAGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KKSTQGEAVVLLAKWLPLNESQV*DIWGAD Trigger: GTCAGCTCCCCAAATGTCCCAGACCTGACTCTCATT...TAGAGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCATAGGGACTGAGAGGAACTaGAAGTGCCATGCTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSEQKAPSNLSASTYQSIGTERN*KCHALS Trigger: AGACAAAGCATGGCACTTCCAGTTCCTCTCAGTCCC...TATGCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | AAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCTAGGGACTGAGAGGAACTaGAAGTGCCATGCTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKSTQGEAVVLLAKWLPLGTERN*KCHALS Trigger: AGACAAAGCATGGCACTTCCAGTTCCTCTCAGTCCC...TAGAGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR TCA 90 bp | AAAGAAAAGTGGTTTATTAAGGAATGCAACAGGCAGCTCCCATTTGTACATCAACCAGAGGGCATCTGGTaGCAATACCACTGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEKWFIKECNRQLPFVHQPEGIW*QYHCLW Trigger: CCAGAGGCAGTGGTATTGTCACCAGATGCCCTCTGG...TTGATGTACAAATGGGAGCTGCCTGTTGCATTCCTTAATAAACCACTTTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR TCA 90 bp | AAAGAAAAGTGGTTTATTAAGGAATGCAACAGGCAGCTCCCATTTGTACATCAAGGCCTCTTCCACCTCTaGAGGATCAGAGAGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KEKWFIKECNRQLPFVHQGLFHL*RIRELH Trigger: GTGGAGCTCTCTGATCCTTCAGAGGTGGAAGAGGCC...TTGATGTACAAATGGGAGCTGCCTGTTGCATTCCTTAATAAACCACTTTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR TCA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCAGAAGAACTCTGAAATaGGGGTGTTCCTTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KWLPLPIYLLSFESLFLFRRTLK*GCSLKK Trigger: CTTCTTCAAGGAACACCCTCATTTCAGAGTTCTTCT...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR GCA 90 bp | CAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCATAGAACTGGAAGTGCCATaGTTTGTCTTCTTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSEQKAPSNLSASTYQSIELEVP*FVFFSS Trigger: GGAGGAGAAGAAGACAAAGCATGGCACTTCCAGTTC...TATGCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CCA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCCAGCATTTCTATAGCTaGCTCTTCCAGGGTTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KWLPLPIYLLSFESLFLFQHFYS*LFQGFD Trigger: ATCAAAACCCTGGAAGAGCCAGCTATAGAAATGCTG...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| 3UTR CAA 72 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTaGCTGAGCTTTGAGAGCCTCTTTCTCTTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VLLAKWLPLPIY*LSFESLFLFLI Trigger: GATGAGGAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR GCA 90 bp | AGGAAAGGCAGGAGCCCTTCTGTCCCTGAATCACAATCCAGGAAACACAGGGAAAACAGCATAACCTTTTaGGAAATTCTTTTCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKGRSPSVPESQSRKHRENSITF*EILFDL Trigger: GAGATCGAAAAGAATTTCGCAAAAGGTTATGCTGTT...TTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024112.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCTTCACTGTCATCTTCTaGTATGTCCATACCGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: KWLPLPIYLLSFESLFLFFTVIF*YVHTVL Trigger: AAGTACGGTATGGACATACCAGAAGATGACAGTGAA...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CCA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCGTAATTCACAAACCCTaGCAATTCTCGTCCACGATA | + |
|
Preference number: 4 (lower is better) Translates to: VLLAKWLPLPIYLLSFESVIHKP*QFSSTI Trigger: TATCGTGGACGAGAATTGCCAGGGTTTGTGAATTAC...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CCA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCTTCAGGATGAAATACTaGATGATCAAGGGAACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLAKWLPLPIYLLSFESFRMKY*MIKGTW Trigger: CCACGTTCCCTTGATCATCCAGTATTTCATCCTGAA...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR TCA 90 bp | AAAGAAAAGTGGTTTATTAAGGAATGCAACAGGCAGCTCCCATTTGTACATCAATTCCAGGCAGGTCAATaGGAGTCAGGTCTGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: KEKWFIKECNRQLPFVHQFQAGQ*ESGLGH Trigger: ATGTCCCAGACCTGACTCTCATTGACCTGCCTGGAA...TTGATGTACAAATGGGAGCTGCCTGTTGCATTCCTTAATAAACCACTTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAAGTGGTTTATTAAGGAATGCAACAGGCAGCTCCCATTTGTACATCAAGCGACATTCTCCCTCTaGCACATTCTCTTCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEKWFIKECNRQLPFVHQATFSL*HILFPL Trigger: CAAGGGGAAGAGAATGTGGCAGAGGGAGAATGTCGC...TTGATGTACAAATGGGAGCTGCCTGTTGCATTCCTTAATAAACCACTTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCTTCACTGTCATCTTCTaGTATGTCCATACCGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VLLAKWLPLPIYLLSFESFTVIF*YVHTVL Trigger: AAGTACGGTATGGACATACCAGAAGATGACAGTGAA...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAAGTGGTTTATTAAGGAATGCAACAGGCAGCTCCCATTTGTACATCAAGAACTGGAAGTGCCATaGTTTGTCTTCTTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KEKWFIKECNRQLPFVHQELEVP*FVFFSS Trigger: GGAGGAGAAGAAGACAAAGCATGGCACTTCCAGTTC...TTGATGTACAAATGGGAGCTGCCTGTTGCATTCCTTAATAAACCACTTTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR TCA 90 bp | AAAGAAAAGTGGTTTATTAAGGAATGCAACAGGCAGCTCCCATTTGTACATCAAAGAAGAACTCTGAAATaGGGGTGTTCCTTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEKWFIKECNRQLPFVHQRRTLK*GCSLKK Trigger: CTTCTTCAAGGAACACCCTCATTTCAGAGTTCTTCT...TTGATGTACAAATGGGAGCTGCCTGTTGCATTCCTTAATAAACCACTTTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CCA 90 bp | AAAGAAAAGTGGTTTATTAAGGAATGCAACAGGCAGCTCCCATTTGTACATCAATTCAGGATGAAATACTaGATGATCAAGGGAACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEKWFIKECNRQLPFVHQFRMKY*MIKGTW Trigger: CCACGTTCCCTTGATCATCCAGTATTTCATCCTGAA...TTGATGTACAAATGGGAGCTGCCTGTTGCATTCCTTAATAAACCACTTTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS GCA 90 bp | GCCAGCCTCTCCTTCAGGAACTTCCTCTTCTCGCTTGTGTCACTCTaGTCCTTCAGGAGCCAGCTGCAGGAATCCTTGTCCTGCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASLSFRNFLFSLVSL*SFRSQLQESLSCRS Trigger: GCTCCTGCAGGACAAGGATTCCTGCAGCTGGCTCCTGAAGGAGCAGAGTGACACAAGCGAGAAGAGGAAGTTCCTGAAGGAGAGGCTGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCGAGCCTGGGCCAGCCTaGCCAGCCTCTCCTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KWLPLPIYLLSFESLFLFEPGPA*PASPSG Trigger: TCCTGAAGGAGAGGCTGGCAAGGCTGGCCCAGGCTC...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CAA 90 bp | TCTCAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCGAGCCTGGGCCAGCCTaGCCAGCCTCTCCTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQSEQKAPSNLSASTYQSEPGPA*PASPSG Trigger: TCCTGAAGGAGAGGCTGGCAAGGCTGGCCCAGGCTC...GCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS TCA 90 bp | CAGTCAGGCTCAGCTGCTCTTGGATGTCCTGCTGACCTCTGCACTTaGCTATCATGTAGCCCTTCTTCAGATGGTACACCAGGTTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QSGSAALGCPADLCT*LSCSPSSDGTPGSA Trigger: TGCGGAACCTGGTGTACCATCTGAAGAAGGGCTACATGATAGTCAAGTGCAGAGGTCAGCAGGACATCCAAGAGCAGCTGAGCCTGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS GCA 90 bp | CAGCTGCAGGAATCCTTGTCCTGCAGGAGCTGGAGCATGCCCTTCTaGAGCCGCTCAGCAAACATTTTCAGGATGAAATACTGGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: QLQESLSCRSWSMPF*SRSANIFRMKYWMI Trigger: GATCATCCAGTATTTCATCCTGAAAATGTTTGCTGAGCGGCTGCAGAAGGGCATGCTCCAGCTCCTGCAGGACAAGGATTCCTGCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS TCA 90 bp | ATGAGCTTATCACTGATCCCCAGACCTACCCCAGCAATGAAGTTCTaGCCCTTGTTGATGGCCTCTTCCACCTCTGAAGGATCAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MSLSLIPRPTPAMKF*PLLMASSTSEGSES Trigger: GCTCTCTGATCCTTCAGAGGTGGAAGAGGCCATCAACAAGGGTCAGAACTTCATTGCTGGGGTAGGTCTGGGGATCAGTGATAAGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CCA 90 bp | TACAGCCACCCTGGTAATTCCAGGCAGGTCAATGAGAGTCAGGTCTaGGACATTTGGGGAGCTGACATCCAGGCTAATGAGCTTATCACT | + |
|
Preference number: 5 (lower is better) Translates to: YSHPGNSRQVNESQV*DIWGADIQANELIT Trigger: AGTGATAAGCTCATTAGCCTGGATGTCAGCTCCCCAAATGTCCCAGACCTGACTCTCATTGACCTGCCTGGAATTACCAGGGTGGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CCA 90 bp | TATGTCTTGATGAGTCTCTTGATCTGGCGTCCTATGTCTGCAGGCTaGTTGCCTACAGCCACCCTGGTAATTCCAGGCAGGTCAATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YVLMSLLIWRPMSAG*LPTATLVIPGRSMR Trigger: TCTCATTGACCTGCCTGGAATTACCAGGGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTCATCAAGACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS-3UTR CAA 90 bp | AGGAAAGGCAGGAGCCCTTCTGTCCCTGAATCACAATCCAGGAAACACAGGGAAACTTCCTCTTCTCGCTaGTGTCACTCTGCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKGRSPSVPESQSRKHRETSSSR*CHSAPS Trigger: TGAAGGAGCAGAGTGACACAAGCGAGAAGAGGAAGT...TTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS CCA 90 bp | TCTCAGCCATGGATGAGGTCTGTAAATCTTGGGACTGAGAGGAACTaGAAGTGCCATGCTTTGTCTTCTTCTCCTCCTCAGCTTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SQPWMRSVNLGTERN*KCHALSSSPPQLPP Trigger: AGGAGGAAGCTGAGGAGGAGAAGAAGACAAAGCATGGCACTTCCAGTTCCTCTCAGTCCCAAGATTTACAGACCTCATCCATGGCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS TCA 90 bp | TGCTGGAAGATCTCAGCCATGGATGAGGTCTGTAAATCTTGGGACTaGGAGGAACTGGAAGTGCCATGCTTTGTCTTCTTCTCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CWKISAMDEVCKSWD*EELEVPCFVFFSSS Trigger: TGAGGAGGAGAAGAAGACAAAGCATGGCACTTCCAGTTCCTCTCAGTCCCAAGATTTACAGACCTCATCCATGGCTGAGATCTTCCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS GCA 90 bp | CTGAAGGATCAGAGAGCTCCACTTCGATGTCATCATAGGAGACTTTaGCTCTCCACTCCTCTCCCTCATTCAGCTTCCTCAATTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKDQRAPLRCHHRRL*LSTPLPHSASSISA Trigger: TGCTGAAATTGAGGAAGCTGAATGAGGGAGAGGAGTGGAGAGGCAAAGTCTCCTATGATGACATCGAAGTGGAGCTCTCTGATCCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CCA 90 bp | TCCACATTGCTGGGGACCACCACCAGGTTGATGGTCTCCTGTTTTTaGATGTATGTCTTGATGAGTCTCTTGATCTGGCGTCCTATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: STLLGTTTRLMVSCF*MYVLMSLLIWRPMS Trigger: AGACATAGGACGCCAGATCAAGAGACTCATCAAGACATACATCCAAAAACAGGAGACCATCAACCTGGTGGTGGTCCCCAGCAATGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS-3UTR CAA 90 bp | CAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCATAGGGACCACCACCAGGTaGATGGTCTCCTGTTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QSEQKAPSNLSASTYQSIGTTTR*MVSCFW Trigger: CCAAAAACAGGAGACCATCAACCTGGTGGTGGTCCC...TATGCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CAA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCTCTGCAGCTCCTCACTaGCACTCTGGTGACTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLLAKWLPLPIYLLSFESSAAPH*HSGDFP Trigger: AGGAAAGTCACCAGAGTGCAAGTGAGGAGCTGCAGA...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CAA 90 bp | GGCAAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTTGGAAGTGCCATGCTTaGTCTTCTTCTCCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GKKSTQGEAVVLLAKWLPWKCHA*SSSPPQ Trigger: CTGAGGAGGAGAAGAAGACAAAGCATGGCACTTCCA...AGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCACTTCCTCTTCTCGCTaGTGTCACTCTGCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KWLPLPIYLLSFESLFLFTSSSR*CHSAPS Trigger: TGAAGGAGCAGAGTGACACAAGCGAGAAGAGGAAGT...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGGCAGGAGCCCTTCTGTCCCTGAATCACAATCCAGGAAACACAGGGAAGATGGTCTCCTGTTTTaGGATGTATGTCTTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: RKGRSPSVPESQSRKHREDGLLF*DVCLDE Trigger: CTCATCAAGACATACATCCAAAAACAGGAGACCATC...TTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTCTAACCACATCCACGACCTaGTCTTCAGTACCTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KKSTQGEAVVLLAKWLPLTTSTT*SSVPLS Trigger: GGACAGAGGTACTGAAGACAAGGTCGTGGATGTGGT...TAGAGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGGCAGGAGCCCTTCTGTCCCTGAATCACAATCCAGGAAACACAGGGAACTGGCAGTAGATAATTaGTTCCATCTTGAAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RKGRSPSVPESQSRKHRELAVDN*FHLEVE Trigger: CTCCACTTCAAGATGGAACAAATTATCTACTGCCAG...TTCCCTGTGTTTCCTGGATTGTGATTCAGGGACAGAAGGGCTCCTGCCTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CAA 90 bp | CAGAGTGAGCAGAAAGCTCCTTCAAATCTGAGTGCTAGCACTTATCAGAGCATATGGAAGTGCCATGCTTaGTCTTCTTCTCCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QSEQKAPSNLSASTYQSIWKCHA*SSSPPQ Trigger: CTGAGGAGGAGAAGAAGACAAAGCATGGCACTTCCA...TATGCTCTGATAAGTGCTAGCACTCAGATTTGAAGGAGCTTTCTGCTCACTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CAA 90 bp | GGCAAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTGATGGTCTCCTGTTTTaGGATGTATGTCTTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GKKSTQGEAVVLLAKWLPDGLLF*DVCLDE Trigger: CTCATCAAGACATACATCCAAAAACAGGAGACCATC...AGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
||
| CDS-3UTR CAA 90 bp | GGCAAGAAGAGTACTCAGGGTGAAGCCGTTGTCTTATTAGCAAAGTGGCTTCCTATAATTTGTTCCATCTaGAAGTGGAGTCGGATCGAC | + |
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Preference number: 5 (lower is better) Translates to: GKKSTQGEAVVLLAKWLPIICSI*KWSRID Trigger: GTCGATCCGACTCCACTTCAAGATGGAACAAATTAT...AGGAAGCCACTTTGCTAATAAGACAACGGCTTCACCCTGAGTACTCTTCTTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCATAATTTGTTCCATCTaGAAGTGGAGTCGGATCGAC | + |
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Preference number: 5 (lower is better) Translates to: KWLPLPIYLLSFESLFLFIICSI*KWSRID Trigger: GTCGATCCGACTCCACTTCAAGATGGAACAAATTAT...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CAA 90 bp | AAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCCTCTTTCTCTTCGGCTCTTCCAGGGTTTaGATTTGTCTTCTTATAATG | + |
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Preference number: 5 (lower is better) Translates to: KWLPLPIYLLSFESLFLFGSSRV*ICLLIM Trigger: CATTATAAGAAGACAAATCAAAACCCTGGAAGAGCC...GAAGAGAAAGAGGCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS GCA 90 bp | TCAGAAACACTTGTAAAGGCAGCTCGTACAATTTCAGTGACCGTGTaGAGCATTTCTATAGCTGGCTCTTCCAGGGTTTTGATTTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SETLVKAARTISVTV*SISIAGSSRVLICL Trigger: AAGACAAATCAAAACCCTGGAAGAGCCAGCTATAGAAATGCTGCACACGGTCACTGAAATTGTACGAGCTGCCTTTACAAGTGTTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS-3UTR CAA 90 bp | GTCTTATTAGCAAAGTGGCTTCCTCTACCCATCTACTTGCTGAGCTTTGAGAGCGGCTCTTCCAGGGTTTaGATTTGTCTTCTTATAATG | + |
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Preference number: 5 (lower is better) Translates to: VLLAKWLPLPIYLLSFESGSSRV*ICLLIM Trigger: CATTATAAGAAGACAAATCAAAACCCTGGAAGAGCC...GCTCTCAAAGCTCAGCAAGTAGATGGGTAGAGGAAGCCACTTTGCTAATAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS-3UTR CAA 90 bp | AAAGAAAAGTGGTTTATTAAGGAATGCAACAGGCAGCTCCCATTTGTACATCAACTGGCAGTAGATAATTaGTTCCATCTTGAAGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: KEKWFIKECNRQLPFVHQLAVDN*FHLEVE Trigger: CTCCACTTCAAGATGGAACAAATTATCTACTGCCAG...TTGATGTACAAATGGGAGCTGCCTGTTGCATTCCTTAATAAACCACTTTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS CAA 72 bp | GGAATTTGGCTAGCCGGCGCCGAGCCTGGGCCAGCCTaGCCAGCCTCTCCTTCAGGAACTTCCTCTTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: GIWLAGAEPGPA*PASPSGTSSSR Trigger: GCGAGAAGAGGAAGTTCCTGAAGGAGAGGCTGGCAAGGCTGGCCCAGGCTCGGCGCCGGCTAGCCAAATTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS CCA 72 bp | ATGAGTCTCTTGATCTGGCGTCCTATGTCTGCAGGCTaGTTGCCTACAGCCACCCTGGTAATTCCAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: MSLLIWRPMSAG*LPTATLVIPGR Trigger: CCTGCCTGGAATTACCAGGGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS GCA 72 bp | TCCTTCAGGAACTTCCTCTTCTCGCTTGTGTCACTCTaGTCCTTCAGGAGCCAGCTGCAGGAATCCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SFRNFLFSLVSL*SFRSQLQESLS Trigger: GGACAAGGATTCCTGCAGCTGGCTCCTGAAGGAGCAGAGTGACACAAGCGAGAAGAGGAAGTTCCTGAAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 |
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| CDS CAA 90 bp | GTCTTGATGAGTCTCTTGATCTGGCGTCCTATGTCTGCAGGCTGGTaGCCTACAGCCACCCTGGTAATTCCAGGCAGGTCAATGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: VLMSLLIWRPMSAGW*PTATLVIPGRSMRV Trigger: GACTCTCATTGACCTGCCTGGAATTACCAGGGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTCATCAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS GCA 72 bp | TGTCTTGATGAGTCTCTTGATCTGGCGTCCTATGTCTaGAGGCTGGTTGCCTACAGCCACCCTGGTAATTCC | + |
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Preference number: 6 (lower is better) Translates to: CLDESLDLASYV*RLVAYSHPGNS Trigger: GGAATTACCAGGGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTCATCAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CCA 72 bp | CCTGGTAATTCCAGGCAGGTCAATGAGAGTCAGGTCTaGGACATTTGGGGAGCTGACATCCAGGCTAATGAG | + |
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Preference number: 6 (lower is better) Translates to: PGNSRQVNESQV*DIWGADIQANE Trigger: CTCATTAGCCTGGATGTCAGCTCCCCAAATGTCCCAGACCTGACTCTCATTGACCTGCCTGGAATTACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CAA 90 bp | GGGACCACCACCAGGTTGATGGTCTCCTGTTTTTGGATGTATGTCTaGATGAGTCTCTTGATCTGGCGTCCTATGTCTGCAGGCTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: GTTTRLMVSCFWMYV*MSLLIWRPMSAGWL Trigger: CAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTCATCAAGACATACATCCAAAAACAGGAGACCATCAACCTGGTGGTGGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS GCA 72 bp | CAGAGAGCTCCACTTCGATGTCATCATAGGAGACTTTaGCTCTCCACTCCTCTCCCTCATTCAGCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: QRAPLRCHHRRL*LSTPLPHSASS Trigger: TGAGGAAGCTGAATGAGGGAGAGGAGTGGAGAGGCAAAGTCTCCTATGATGACATCGAAGTGGAGCTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CAA 90 bp | AGGTTGATGGTCTCCTGTTTTTGGATGTATGTCTTGATGAGTCTCTaGATCTGGCGTCCTATGTCTGCAGGCTGGTTGCCTACAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: RLMVSCFWMYVLMSL*IWRPMSAGWLPTAT Trigger: GGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTCATCAAGACATACATCCAAAAACAGGAGACCATCAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CAA 90 bp | GTCCACATTGCTGGGGACCACCACCAGGTTGATGGTCTCCTGTTTTaGGATGTATGTCTTGATGAGTCTCTTGATCTGGCGTCCTATGTC | + |
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Preference number: 6 (lower is better) Translates to: VHIAGDHHQVDGLLF*DVCLDESLDLASYV Trigger: GACATAGGACGCCAGATCAAGAGACTCATCAAGACATACATCCAAAAACAGGAGACCATCAACCTGGTGGTGGTCCCCAGCAATGTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS TCA 72 bp | CCTTACTCCAGGACAAGAACTCTTTTCGGAGCCTGGTaGATAGGCGACATTCTCCCTCTGCCACATTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PYSRTRTLFGAW*IGDILPLPHSL Trigger: AAGAGAATGTGGCAGAGGGAGAATGTCGCCTATTCACCAGGCTCCGAAAAGAGTTCTTGTCCTGGAGTAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CCA 72 bp | CTGGGGACCACCACCAGGTTGATGGTCTCCTGTTTTTaGATGTATGTCTTGATGAGTCTCTTGATCTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: LGTTTRLMVSCF*MYVLMSLLIWR Trigger: ACGCCAGATCAAGAGACTCATCAAGACATACATCCAAAAACAGGAGACCATCAACCTGGTGGTGGTCCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS TCA 72 bp | GAAGTTCTGACCCTTGTTGATGGCCTCTTCCACCTCTaGAGGATCAGAGAGCTCCACTTCGATGTCATCATA | + |
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Preference number: 6 (lower is better) Translates to: EVLTLVDGLFHL*RIRELHFDVII Trigger: TATGATGACATCGAAGTGGAGCTCTCTGATCCTTCAGAGGTGGAAGAGGCCATCAACAAGGGTCAGAACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CCA 72 bp | TGGATGAGGTCTGTAAATCTTGGGACTGAGAGGAACTaGAAGTGCCATGCTTTGTCTTCTTCTCCTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: WMRSVNLGTERN*KCHALSSSPPQ Trigger: CTGAGGAGGAGAAGAAGACAAAGCATGGCACTTCCAGTTCCTCTCAGTCCCAAGATTTACAGACCTCATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CAA 72 bp | GTCTCCTGTTTTTGGATGTATGTCTTGATGAGTCTCTaGATCTGGCGTCCTATGTCTGCAGGCTGGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: VSCFWMYVLMSL*IWRPMSAGWLP Trigger: AGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTCATCAAGACATACATCCAAAAACAGGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CAA 90 bp | CTTCTGCAAGGCTCCTCTGTAAATCTGGTCCTGGCAGTAGATAATTaGTTCCATCTTGAAGTGGAGTCGGATCGACATCTCTGCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LLQGSSVNLVLAVDN*FHLEVESDRHLCFL Trigger: AAGGAAGCAGAGATGTCGATCCGACTCCACTTCAAGATGGAACAAATTATCTACTGCCAGGACCAGATTTACAGAGGAGCCTTGCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CAA 72 bp | TCTTTCTCTCCTAGGCCAGTCTCTCCACTGGGTAAGTaGACTGAATCAACGCCTGTGTTTTCTTCTGTGCTA | + |
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Preference number: 6 (lower is better) Translates to: SFSPRPVSPLGK*TESTPVFSSVL Trigger: TAGCACAGAAGAAAACACAGGCGTTGATTCAGTCAACTTACCCAGTGGAGAGACTGGCCTAGGAGAGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CAA 72 bp | GGCTCCTCTGTAAATCTGGTCCTGGCAGTAGATAATTaGTTCCATCTTGAAGTGGAGTCGGATCGACATCTC | + |
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Preference number: 6 (lower is better) Translates to: GSSVNLVLAVDN*FHLEVESDRHL Trigger: GAGATGTCGATCCGACTCCACTTCAAGATGGAACAAATTATCTACTGCCAGGACCAGATTTACAGAGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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| CDS CAA 72 bp | ATGCCCAGACTTCATTATATAAAACAGCATAACCTTTaGCGAAATTCTTTTCGATCTCCTTACTCCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: MPRLHYIKQHNL*RNSFRSPYSRT Trigger: TGTCCTGGAGTAAGGAGATCGAAAAGAATTTCGCAAAAGGTTATGCTGTTTTATATAATGAAGTCTGGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024112.8 |
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| CDS CAA 72 bp | GTGTGCAGCATTTCTATAGCTGGCTCTTCCAGGGTTTaGATTTGTCTTCTTATAATGTTCTCAAATGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: VCSISIAGSSRV*ICLLIMFSNVL Trigger: CAAAACATTTGAGAACATTATAAGAAGACAAATCAAAACCCTGGAAGAGCCAGCTATAGAAATGCTGCACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024112.8 ENSMUST00000188251.7 ENSMUST00000190447.8 |
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