Pregenerated sensors for MX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000386Ensembl transcript IDs: ENSMUST00000023655.13, ENSMUST00000113768.8, ENSMUST00000232193.3, ENSMUST00000232282.3
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACCAGAAGCCGACCCTTCTGAGGTGCTCAGCCAGTACATCCTCCTaGCAAAGAAAAGACAGGAGCAGGATCCTGAGAGGTGCCATCCTC | + |
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Preference number: 1 (lower is better) Translates to: NQKPTLLRCSASTSS*QRKDRSRILRGAIL Trigger: GAGGATGGCACCTCTCAGGATCCTGCTCCTGTCTTTTCTTTGTCAGGAGGATGTACTGGCTGAGCACCTCAGAAGGGTCGGCTTCTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR TCA 90 bp | AGAGGTGCCATCCTCCTAGGCTTTGAGAGGGTCATGTCTTCCTGCTaGAGTAGAATGACTCTCCATAGCTCCTCTCTCCTCATCTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: RGAILLGFERVMSSC*SRMTLHSSSLLISS Trigger: TGAGGAGATGAGGAGAGAGGAGCTATGGAGAGTCATTCTACTTCAGCAGGAAGACATGACCCTCTCAAAGCCTAGGAGGATGGCACCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR GCA 90 bp | TGGAAAGGACTGGACTATAGCTGCTGGTTGTATGTGGTGTCTGCCTaGCTAGAGGACTGGTCTGCAGCTGCTGAGTCATACTTGGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: WKGLDYSCWLYVVSA*LEDWSAAAESYLVF Trigger: AAACACCAAGTATGACTCAGCAGCTGCAGACCAGTCCTCTAGGCAGGCAGACACCACATACAACCAGCAGCTATAGTCCAGTCCTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR GCA 90 bp | AAAAGCCGCCTCTTCAGGAACTTCTTCTTCTCTCTGGTGTCACTCTaGTCCTCCAGGAACCAGCTGCACTTACTGGTGTCCTGTAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: KSRLFRNFFFSLVSL*SSRNQLHLLVSCKS Trigger: GCTTTTACAGGACACCAGTAAGTGCAGCTGGTTCCTGGAGGAGCAGAGTGACACCAGAGAGAAGAAGAAGTTCCTGAAGAGGCGGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
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| 3UTR CCA 90 bp | TCTCTCTGGTGTCACTCTGCTCCTCCAGGAACCAGCTGCACTTACTaGTGTCCTGTAAAAGCTGAAGCATCGTTTTCTCTATTTCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: SLWCHSAPPGTSCTY*CPVKAEASFSLFPP Trigger: GGGAGGAAATAGAGAAAACGATGCTTCAGCTTTTACAGGACACCAGTAAGTGCAGCTGGTTCCTGGAGGAGCAGAGTGACACCAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
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| 3UTR TCA 90 bp | TGTGGTAACACTGACATTGAGAGAAACTCACCTAAGAACTACTTGTaGGGTTCCTGCAGCAGTTTGTTGCTTCTGCAGCCTCACCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: CGNTDIERNSPKNYL*GSCSSLLLLQPHLR Trigger: CCTGAGGTGAGGCTGCAGAAGCAACAAACTGCTGCAGGAACCTCACAAGTAGTTCTTAGGTGAGTTTCTCTCAATGTCAGTGTTACCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR GCA 90 bp | ACTTCTTCTTCTCTCTGGTGTCACTCTGCTCCTCCAGGAACCAGCTaGACTTACTGGTGTCCTGTAAAAGCTGAAGCATCGTTTTCTCTA | + |
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Preference number: 1 (lower is better) Translates to: TSSSLWCHSAPPGTS*TYWCPVKAEASFSL Trigger: TAGAGAAAACGATGCTTCAGCTTTTACAGGACACCAGTAAGTGCAGCTGGTTCCTGGAGGAGCAGAGTGACACCAGAGAGAAGAAGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
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| 3UTR CCA 90 bp | TTCCTGCAGCAGTTTGTTGCTTCTGCAGCCTCACCTCAGGCTAGATaGCAAGCTTTCATCAAGATTGAACTTCAGCTGCTGATTCATTCT | + |
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Preference number: 1 (lower is better) Translates to: FLQQFVASAASPQAR*QAFIKIELQLLIHS Trigger: AGAATGAATCAGCAGCTGAAGTTCAATCTTGATGAAAGCTTGCCATCTAGCCTGAGGTGAGGCTGCAGAAGCAACAAACTGCTGCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR TCA 90 bp | CCCATGATGAAGGAGTATAAATATGACCTCACAAACAGTTGGAGATaGGCAACGGAGCCTTGGCTTGGTTTGCTCTGTCTAGCTATTCTT | + |
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Preference number: 1 (lower is better) Translates to: PMMKEYKYDLTNSWR*ATEPWLGLLCLAIL Trigger: AAGAATAGCTAGACAGAGCAAACCAAGCCAAGGCTCCGTTGCTCATCTCCAACTGTTTGTGAGGTCATATTTATACTCCTTCATCATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR CCA 90 bp | TGGCTTGGTTTGCTCTGTCTAGCTATTCTTTACTATCAACATGCATaGAATGGTTTGCCTTACATAGCATGGTTGAGCTCCACTTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: WLGLLCLAILYYQHA*NGLPYIAWLSSTCG Trigger: ACCACAAGTGGAGCTCAACCATGCTATGTAAGGCAAACCATTCCATGCATGTTGATAGTAAAGAATAGCTAGACAGAGCAAACCAAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR TCA 90 bp | TCAAATGATGTTTTGCTGGGGTACACAGGTGAAATGATGTCTTGCTaGAGCAAACACATGAAAGAATGTTTCCCTGAAGCAGACACAGCT | + |
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Preference number: 1 (lower is better) Translates to: SNDVLLGYTGEMMSC*SKHMKECFPEADTA Trigger: AGCTGTGTCTGCTTCAGGGAAACATTCTTTCATGTGTTTGCTTCAGCAAGACATCATTTCACCTGTGTACCCCAGCAAAACATCATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCTAGAGGACTGGTCTGCAGCTGCTGAGTCATACTTGGTGTTTGTTATGGGAGCTGCCAAGGAAGACTaGGCTTGCCCCCAAAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: CLEDWSAAAESYLVFVMGAAKED*ACPQRT Trigger: AGTTCTTTGGGGGCAAGCTCAGTCTTCCTTGGCAGC...TCCCATAACAAACACCAAGTATGACTCAGCAGCTGCAGACCAGTCCTCTAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCTAGAGGACTGGTCTGCAGCTGCTGAGTCATACTTGGTGTTTGTTATGGGAGCCAGTACATCCTCCTaGCAAAGAAAAGACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: CLEDWSAAAESYLVFVMGASTSS*QRKDRS Trigger: GCTCCTGTCTTTTCTTTGTCAGGAGGATGTACTGGC...TCCCATAACAAACACCAAGTATGACTCAGCAGCTGCAGACCAGTCCTCTAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR CCA 90 bp | GCAACGGAGCCTTGGCTTGGTTTGCTCTGTCTAGCTATTCTTTACTATCAACATGCCTGCCTAGAGGACTaGTCTGCAGCTGCTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: ATEPWLGLLCLAILYYQHACLED*SAAAES Trigger: TGACTCAGCAGCTGCAGACCAGTCCTCTAGGCAGGC...ATGTTGATAGTAAAGAATAGCTAGACAGAGCAAACCAAGCCAAGGCTCCGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGCATGGTTGAGCTCCACTTGTGGTAACACTGACATTGAGAGAAACTCACCTGCTGCCAAGGAAGACTaGGCTTGCCCCCAAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: IAWLSSTCGNTDIERNSPAAKED*ACPQRT Trigger: AGTTCTTTGGGGGCAAGCTCAGTCTTCCTTGGCAGC...AGGTGAGTTTCTCTCAATGTCAGTGTTACCACAAGTGGAGCTCAACCATGCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | GAACTTCAGCTGCTGATTCATTCTTGGTTTCTGCCTGTGGAAAGGACTGGACTACTGGTCTGCAGCTGCTaGGTCATACTTGGTGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: ELQLLIHSWFLPVERTGLLVCSC*VILGVC Trigger: ACAAACACCAAGTATGACTCAGCAGCTGCAGACCAG...TAGTCCAGTCCTTTCCACAGGCAGAAACCAAGAATGAATCAGCAGCTGAAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGAAAGAATGTTTCCCTGAAGCAGACACAGCTGAAAGGATGCTTTCATATGCCTGCCTAGAGGACTaGTCTGCAGCTGCTGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: HMKECFPEADTAERMLSYACLED*SAAAES Trigger: TGACTCAGCAGCTGCAGACCAGTCCTCTAGGCAGGC...ATATGAAAGCATCCTTTCAGCTGTGTCTGCTTCAGGGAAACATTCTTTCATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAACGGAGCCTTGGCTTGGTTTGCTCTGTCTAGCTATTCTTTACTATCAACAGCCAGTACATCCTCCTaGCAAAGAAAAGACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SNGALAWFALSSYSLLSTASTSS*QRKDRS Trigger: GCTCCTGTCTTTTCTTTGTCAGGAGGATGTACTGGC...TGTTGATAGTAAAGAATAGCTAGACAGAGCAAACCAAGCCAAGGCTCCGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | GAACTTCAGCTGCTGATTCATTCTTGGTTTCTGCCTGTGGAAAGGACTGGACTATGTTTGTTATGGGACTaGACTGCTGCCAAGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: ELQLLIHSWFLPVERTGLCLLWD*TAAKED Trigger: GTCTTCCTTGGCAGCAGTTCAGTCCCATAACAAACA...TAGTCCAGTCCTTTCCACAGGCAGAAACCAAGAATGAATCAGCAGCTGAAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTGCTTCTGCAGCCTCACCTCAGGCTAGATGGCAAGCTTTCATCAAGATTGTCATGTCTTCCTGCTaGAGTAGAATGACTCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: FVASAASPQARWQAFIKIVMSSC*SRMTLH Trigger: ATGGAGAGTCATTCTACTTCAGCAGGAAGACATGAC...AATCTTGATGAAAGCTTGCCATCTAGCCTGAGGTGAGGCTGCAGAAGCAACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAACGGAGCCTTGGCTTGGTTTGCTCTGTCTAGCTATTCTTTACTATCAACACCAAAGAACTATTGCTaGACAGGTCCACTTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SNGALAWFALSSYSLLSTPKNYC*TGPLPP Trigger: TGGAGGAAGTGGACCTGTTCAGCAATAGTTCTTTGG...TGTTGATAGTAAAGAATAGCTAGACAGAGCAAACCAAGCCAAGGCTCCGTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGCATGGTTGAGCTCCACTTGTGGTAACACTGACATTGAGAGAAACTCACCTTGTTTGTTATGGGACTaGACTGCTGCCAAGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: IAWLSSTCGNTDIERNSPCLLWD*TAAKED Trigger: GTCTTCCTTGGCAGCAGTTCAGTCCCATAACAAACA...AGGTGAGTTTCTCTCAATGTCAGTGTTACCACAAGTGGAGCTCAACCATGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTCTCTCTGATCGTCTTCAAGGTTTCCTTGTAAACCTGGTCCTGGCAGTATGTTCCATCTGGAAGTaGAGTCGGATCAGGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: FLLSDRLQGFLVNLVLAVCSIWK*SRIRFS Trigger: TGAAAACCTGATCCGACTTCACTTCCAGATGGAACA...TACTGCCAGGACCAGGTTTACAAGGAAACCTTGAAGACGATCAGAGAGAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
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| 3UTR-3UTR GCA 90 bp | CACTTAGCAAGAATTTTATTGGAAGCGCTAAAGTGGAAACGTCCAGTTTCCTTGCCTGCAGCAGTTTGTTaGTTCTGCAGCCTCACCTCA | + |
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Preference number: 2 (lower is better) Translates to: HLARILLEALKWKRPVSLPAAVC*FCSLTS Trigger: TGAGGTGAGGCTGCAGAAGCAACAAACTGCTGCAGG...CAAGGAAACTGGACGTTTCCACTTTAGCGCTTCCAATAAAATTCTTGCTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGCATGGTTGAGCTCCACTTGTGGTAACACTGACATTGAGAGAAACTCACCTGTCATGTCTTCCTGCTaGAGTAGAATGACTCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: IAWLSSTCGNTDIERNSPVMSSC*SRMTLH Trigger: ATGGAGAGTCATTCTACTTCAGCAGGAAGACATGAC...AGGTGAGTTTCTCTCAATGTCAGTGTTACCACAAGTGGAGCTCAACCATGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGAAAGAATGTTTCCCTGAAGCAGACACAGCTGAAAGGATGCTTTCATATACCTCTGATGGGTGGTaGGCTAAAAGAGAGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: HMKECFPEADTAERMLSYTSDGW*AKREVE Trigger: TTCCACCTCTCTTTTAGCCCACCACCCATCAGAGGT...ATATGAAAGCATCCTTTCAGCTGTGTCTGCTTCAGGGAAACATTCTTTCATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTAGCAAGAATTTTATTGGAAGCGCTAAAGTGGAAACGTCCAGTTTCCTTGACCTCTGATGGGTGGTaGGCTAAAAGAGAGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: HLARILLEALKWKRPVSLTSDGW*AKREVE Trigger: TTCCACCTCTCTTTTAGCCCACCACCCATCAGAGGT...CAAGGAAACTGGACGTTTCCACTTTAGCGCTTCCAATAAAATTCTTGCTAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTAGCAAGAATTTTATTGGAAGCGCTAAAGTGGAAACGTCCAGTTTCCTTGGCCTGTGGAAAGGACTaGACTATAGCTGCTGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: HLARILLEALKWKRPVSLACGKD*TIAAGC Trigger: ACAACCAGCAGCTATAGTCCAGTCCTTTCCACAGGC...CAAGGAAACTGGACGTTTCCACTTTAGCGCTTCCAATAAAATTCTTGCTAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGCATGGTTGAGCTCCACTTGTGGTAACACTGACATTGAGAGAAACTCACCTCTGCTGATTCATTCTTaGTTTCTGCCTGTGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: IAWLSSTCGNTDIERNSPLLIHS*FLPVER Trigger: CCTTTCCACAGGCAGAAACCAAGAATGAATCAGCAG...AGGTGAGTTTCTCTCAATGTCAGTGTTACCACAAGTGGAGCTCAACCATGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTTAGTTATATCAAATGATGTTTTGCTGGGGTACACAGGTGAAATGATGTCTAGAAGCCGACCCTTCTaGGGTGCTCAGCCAGTACAT | + |
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Preference number: 2 (lower is better) Translates to: KLVISNDVLLGYTGEMMSRSRPF*GAQPVH Trigger: ATGTACTGGCTGAGCACCTCAGAAGGGTCGGCTTCT...AGACATCATTTCACCTGTGTACCCCAGCAAAACATCATTTGATATAACTAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAATGGTTTGCCTTACATAGCATGGTTGAGCTCCACTTGTGGTAACACTGACAGTTTACAAAGGGCTTaGTTGCTTCCACAGTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: WNGLPYIAWLSSTCGNTDSLQRA*LLPQSK Trigger: TTTAGACTGTGGAAGCAAGCAAGCCCTTTGTAAACT...GTCAGTGTTACCACAAGTGGAGCTCAACCATGCTATGTAAGGCAAACCATTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTAGCAAGAATTTTATTGGAAGCGCTAAAGTGGAAACGTCCAGTTTCCTTGAACGGAGCCTTGGCTTaGTTTGCTCTGTCTAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: HLARILLEALKWKRPVSLNGALA*FALSSY Trigger: ATAGCTAGACAGAGCAAACCAAGCCAAGGCTCCGTT...CAAGGAAACTGGACGTTTCCACTTTAGCGCTTCCAATAAAATTCTTGCTAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR CAA 90 bp | CTTTACTATCAACATGCATGGAATGGTTTGCCTTACATAGCATGGTaGAGCTCCACTTGTGGTAACACTGACATTGAGAGAAACTCACCT | + |
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Preference number: 2 (lower is better) Translates to: LYYQHAWNGLPYIAW*SSTCGNTDIERNSP Trigger: AGGTGAGTTTCTCTCAATGTCAGTGTTACCACAAGTGGAGCTCAACCATGCTATGTAAGGCAAACCATTCCATGCATGTTGATAGTAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR GCA 90 bp | GCAACGGAGCCTTGGCTTGGTTTGCTCTGTCTAGCTATTCTTTACTATCAACATAGTTTACAAAGGGCTTaGTTGCTTCCACAGTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: ATEPWLGLLCLAILYYQHSLQRA*LLPQSK Trigger: TTTAGACTGTGGAAGCAAGCAAGCCCTTTGTAAACT...ATGTTGATAGTAAAGAATAGCTAGACAGAGCAAACCAAGCCAAGGCTCCGTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTTAGTTATATCAAATGATGTTTTGCTGGGGTACACAGGTGAAATGATGTCTCTTGGTTTCTGCCTGTaGAAAGGACTGGACTATAGC | + |
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Preference number: 2 (lower is better) Translates to: KLVISNDVLLGYTGEMMSLGFCL*KGLDYS Trigger: GCTATAGTCCAGTCCTTTCCACAGGCAGAAACCAAG...AGACATCATTTCACCTGTGTACCCCAGCAAAACATCATTTGATATAACTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGAAAGAATGTTTCCCTGAAGCAGACACAGCTGAAAGGATGCTTTCATATTACTATCAACATGCATaGAATGGTTTGCCTTACATA | + |
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Preference number: 2 (lower is better) Translates to: HMKECFPEADTAERMLSYYYQHA*NGLPYI Trigger: TATGTAAGGCAAACCATTCCATGCATGTTGATAGTA...ATATGAAAGCATCCTTTCAGCTGTGTCTGCTTCAGGGAAACATTCTTTCATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTTAGTTATATCAAATGATGTTTTGCTGGGGTACACAGGTGAAATGATGTCTACACAGCTGAAAGGATaGTTTCATATGACATTGCAA | + |
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Preference number: 2 (lower is better) Translates to: KLVISNDVLLGYTGEMMSTQLKG*FHMTLQ Trigger: TTGCAATGTCATATGAAAGCATCCTTTCAGCTGTGT...AGACATCATTTCACCTGTGTACCCCAGCAAAACATCATTTGATATAACTAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTTAGTTATATCAAATGATGTTTTGCTGGGGTACACAGGTGAAATGATGTCTTACTATCAACATGCATaGAATGGTTTGCCTTACATA | + |
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Preference number: 2 (lower is better) Translates to: KLVISNDVLLGYTGEMMSYYQHA*NGLPYI Trigger: TATGTAAGGCAAACCATTCCATGCATGTTGATAGTA...AGACATCATTTCACCTGTGTACCCCAGCAAAACATCATTTGATATAACTAACTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR GCA 72 bp | CTGGACTATAGCTGCTGGTTGTATGTGGTGTCTGCCTaGCTAGAGGACTGGTCTGCAGCTGCTGAGTCATAC | + |
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Preference number: 3 (lower is better) Translates to: LDYSCWLYVVSA*LEDWSAAAESY Trigger: GTATGACTCAGCAGCTGCAGACCAGTCCTCTAGGCAGGCAGACACCACATACAACCAGCAGCTATAGTCCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR CCA 72 bp | GGTTTCTGCCTGTGGAAAGGACTGGACTATAGCTGCTaGTTGTATGTGGTGTCTGCCTGCCTAGAGGACTGG | + |
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Preference number: 3 (lower is better) Translates to: GFCLWKGLDYSC*LYVVSACLEDW Trigger: CCAGTCCTCTAGGCAGGCAGACACCACATACAACCAGCAGCTATAGTCCAGTCCTTTCCACAGGCAGAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR GCA 72 bp | CTTGGTTTCTGCCTGTGGAAAGGACTGGACTATAGCTaGTGGTTGTATGTGGTGTCTGCCTGCCTAGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: LGFCLWKGLDYS*WLYVVSACLED Trigger: GTCCTCTAGGCAGGCAGACACCACATACAACCAGCAGCTATAGTCCAGTCCTTTCCACAGGCAGAAACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR GCA 72 bp | TCTCTCTGGTGTCACTCTGCTCCTCCAGGAACCAGCTaGACTTACTGGTGTCCTGTAAAAGCTGAAGCATCG | + |
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Preference number: 3 (lower is better) Translates to: SLWCHSAPPGTS*TYWCPVKAEAS Trigger: CGATGCTTCAGCTTTTACAGGACACCAGTAAGTGCAGCTGGTTCCTGGAGGAGCAGAGTGACACCAGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
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| 3UTR TCA 72 bp | ATCCTCCTAGGCTTTGAGAGGGTCATGTCTTCCTGCTaGAGTAGAATGACTCTCCATAGCTCCTCTCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: ILLGFERVMSSC*SRMTLHSSSLL Trigger: GAGGAGAGAGGAGCTATGGAGAGTCATTCTACTTCAGCAGGAAGACATGACCCTCTCAAAGCCTAGGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR GCA 72 bp | GCTGAGTCATACTTGGTGTTTGTTATGGGACTGAACTaGTGCCAAGGAAGACTGAGCTTGCCCCCAAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: AESYLVFVMGLN*CQGRLSLPPKN Trigger: GTTCTTTGGGGGCAAGCTCAGTCTTCCTTGGCAGCAGTTCAGTCCCATAACAAACACCAAGTATGACTCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| 3UTR-3UTR CAA 90 bp | ATAGCATGGTTGAGCTCCACTTGTGGTAACACTGACATTGAGAGAAACTCACCTTCCTGCAGCAGTTTGTaGCTTCTGCAGCCTCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: IAWLSSTCGNTDIERNSPSCSSL*LLQPHL Trigger: GAGGTGAGGCTGCAGAAGCAACAAACTGCTGCAGGA...AGGTGAGTTTCTCTCAATGTCAGTGTTACCACAAGTGGAGCTCAACCATGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| 3UTR GCA 72 bp | CCTCTCTCCTCATCTCCTCAGAGTTTACAAAGGGCTTaGTTGCTTCCACAGTCTAAAGGCAACGTTCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: PLSSSPQSLQRA*LLPQSKGNVLT Trigger: TGTCAGAACGTTGCCTTTAGACTGTGGAAGCAAGCAAGCCCTTTGTAAACTCTGAGGAGATGAGGAGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| 3UTR CCA 72 bp | GCTGATTCATTCTTGGTTTCTGCCTGTGGAAAGGACTaGACTATAGCTGCTGGTTGTATGTGGTGTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ADSFLVSACGKD*TIAAGCMWCLP Trigger: AGGCAGACACCACATACAACCAGCAGCTATAGTCCAGTCCTTTCCACAGGCAGAAACCAAGAATGAATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| 3UTR CCA 72 bp | CAGTTTGTTGCTTCTGCAGCCTCACCTCAGGCTAGATaGCAAGCTTTCATCAAGATTGAACTTCAGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QFVASAASPQAR*QAFIKIELQLL Trigger: CAGCAGCTGAAGTTCAATCTTGATGAAAGCTTGCCATCTAGCCTGAGGTGAGGCTGCAGAAGCAACAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| 3UTR CCA 72 bp | TGTCACTCTGCTCCTCCAGGAACCAGCTGCACTTACTaGTGTCCTGTAAAAGCTGAAGCATCGTTTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: CHSAPPGTSCTY*CPVKAEASFSL Trigger: TAGAGAAAACGATGCTTCAGCTTTTACAGGACACCAGTAAGTGCAGCTGGTTCCTGGAGGAGCAGAGTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
||
| 3UTR TCA 72 bp | ACTGACATTGAGAGAAACTCACCTAAGAACTACTTGTaGGGTTCCTGCAGCAGTTTGTTGCTTCTGCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TDIERNSPKNYL*GSCSSLLLLQP Trigger: AGGCTGCAGAAGCAACAAACTGCTGCAGGAACCTCACAAGTAGTTCTTAGGTGAGTTTCTCTCAATGTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| 3UTR TCA 72 bp | AAGGAGTATAAATATGACCTCACAAACAGTTGGAGATaGGCAACGGAGCCTTGGCTTGGTTTGCTCTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: KEYKYDLTNSWR*ATEPWLGLLCL Trigger: TAGACAGAGCAAACCAAGCCAAGGCTCCGTTGCTCATCTCCAACTGTTTGTGAGGTCATATTTATACTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| 3UTR CCA 72 bp | CACAAACAGTTGGAGATGAGCAACGGAGCCTTGGCTTaGTTTGCTCTGTCTAGCTATTCTTTACTATCAACA | + |
|
Preference number: 3 (lower is better) Translates to: HKQLEMSNGALA*FALSSYSLLST Trigger: TGTTGATAGTAAAGAATAGCTAGACAGAGCAAACCAAGCCAAGGCTCCGTTGCTCATCTCCAACTGTTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| 3UTR CCA 72 bp | TATCAACATGCATGGAATGGTTTGCCTTACATAGCATaGTTGAGCTCCACTTGTGGTAACACTGACATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: YQHAWNGLPYIA*LSSTCGNTDIE Trigger: CTCAATGTCAGTGTTACCACAAGTGGAGCTCAACCATGCTATGTAAGGCAAACCATTCCATGCATGTTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| 3UTR CCA 72 bp | TTGCTCTGTCTAGCTATTCTTTACTATCAACATGCATaGAATGGTTTGCCTTACATAGCATGGTTGAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLCLAILYYQHA*NGLPYIAWLSS Trigger: GGAGCTCAACCATGCTATGTAAGGCAAACCATTCCATGCATGTTGATAGTAAAGAATAGCTAGACAGAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCTGTGGAAAGGACTGGACTATAGCTGCTGGTTGTATGTGGTGTCTGCCCTCAGTCAGTCTCTCTaGCAGGCAGGGCACTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FCLWKGLDYSCWLYVVSALSQSL*QAGHCG Trigger: GCCACAGTGCCCTGCCTGGCAGAGAGACTGACTGAG...GGCAGACACCACATACAACCAGCAGCTATAGTCCAGTCCTTTCCACAGGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR GCA 90 bp | TTGGTGTTTGTTATGGGACTGAACTGCTGCCAAGGAAGACTGAGCTTGCCCCCATCTCTGGTGTCACTCTaGTCCTCCAGGAACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVFVMGLNCCQGRLSLPPSLVSL*SSRNQL Trigger: CAGCTGGTTCCTGGAGGAGCAGAGTGACACCAGAGA...TGGGGGCAAGCTCAGTCTTCCTTGGCAGCAGTTCAGTCCCATAACAAACACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGCTGAGTCATACTTGGTGTTTGTTATGGGACTGAACTGCTGCCAAGGACCAGGCAGGGCACTGTaGCCTTCCCATCTTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAAESYLVFVMGLNCCQGPGRAL*PSHLPE Trigger: TTCTGGAAGATGGGAAGGCCACAGTGCCCTGCCTGG...TCCTTGGCAGCAGTTCAGTCCCATAACAAACACCAAGTATGACTCAGCAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR GCA 90 bp | GTGCTCAGCCAGTACATCCTCCTGACAAAGAAAAGACAGGAGCAGGATCCTGAGCCTCCAGGAACCAGCTaGACTTACTGGTGTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLSQYILLTKKRQEQDPEPPGTS*TYWCPV Trigger: TACAGGACACCAGTAAGTGCAGCTGGTTCCTGGAGG...CTCAGGATCCTGCTCCTGTCTTTTCTTTGTCAGGAGGATGTACTGGCTGAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGCTGAGTCATACTTGGTGTTTGTTATGGGACTGAACTGCTGCCAAGGATCTCTGGTGTCACTCTaGTCCTCCAGGAACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAAESYLVFVMGLNCCQGSLVSL*SSRNQL Trigger: CAGCTGGTTCCTGGAGGAGCAGAGTGACACCAGAGA...TCCTTGGCAGCAGTTCAGTCCCATAACAAACACCAAGTATGACTCAGCAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCTCTGGTGTCACTCTGCTCCTCCAGGAACCAGCTGCACTTACTGGTGTGGACTACCACCAGGTTaGTGGTCTCTTGTTTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLWCHSAPPGTSCTYWCGLPPG*WSLVFG Trigger: TCCAAAAACAAGAGACCATCAACCTGGTGGTAGTCC...ACACCAGTAAGTGCAGCTGGTTCCTGGAGGAGCAGAGTGACACCAGAGAGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
||
| 3UTR CAA 72 bp | TGCCTAGAGGACTGGTCTGCAGCTGCTGAGTCATACTaGGTGTTTGTTATGGGACTGAACTGCTGCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLEDWSAAAESY*VFVMGLNCCQG Trigger: TCCTTGGCAGCAGTTCAGTCCCATAACAAACACCAAGTATGACTCAGCAGCTGCAGACCAGTCCTCTAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCTGTGGAAAGGACTGGACTATAGCTGCTGGTTGTATGTGGTGTCTGCCCATCATAGGAGACTTTaGCTCTCCACTCCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCLWKGLDYSCWLYVVSAHHRRL*LSTPLL Trigger: AAGGAGAGGAGTGGAGAGGCAAAGTCTCCTATGATG...GGCAGACACCACATACAACCAGCAGCTATAGTCCAGTCCTTTCCACAGGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR GCA 90 bp | TCCATAGCTCCTCTCTCCTCATCTCCTCAGAGTTTACAAAGGGCTTGCTTGCTTCCTCCAGGAACCAGCTaGACTTACTGGTGTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SIAPLSSSPQSLQRACLLPPGTS*TYWCPV Trigger: TACAGGACACCAGTAAGTGCAGCTGGTTCCTGGAGG...AAGCAAGCAAGCCCTTTGTAAACTCTGAGGAGATGAGGAGAGAGGAGCTATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGCTGAGTCATACTTGGTGTTTGTTATGGGACTGAACTGCTGCCAAGGAAATTTGGCAAGCTTCTaGCGAGCCTCATCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAAESYLVFVMGLNCCQGNLASF*RASSSL Trigger: AAGGCTGGATGAGGCTCGGCAGAAGCTTGCCAAATT...TCCTTGGCAGCAGTTCAGTCCCATAACAAACACCAAGTATGACTCAGCAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR CCA 90 bp | AACTTTTCTCTTCCACTACCTCTGATGGGTGGTGGGCTAAAAGAGAGGTGGAATCCACCAGATCAGGCTTaGTCAAGACCCCTATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NFSLPLPLMGGGLKERWNPPDQA*SRPLWS Trigger: GGACCATAGGGGTCTTGACCAAGCCTGATCTGGTGG...ATTCCACCTCTCTTTTAGCCCACCACCCATCAGAGGTAGTGGAAGAGAAAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCTCTCTGATCGTCTTCAAGGTTTCCTTGTAAACCTGGTCCTGGCAGTACCACCAGATCAGGCTTaGTCAAGACCCCTATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLSDRLQGFLVNLVLAVPPDQA*SRPLWS Trigger: GGACCATAGGGGTCTTGACCAAGCCTGATCTGGTGG...TACTGCCAGGACCAGGTTTACAAGGAAACCTTGAAGACGATCAGAGAGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
||
| CDS-3UTR CCA 90 bp | GTGCTCAGCCAGTACATCCTCCTGACAAAGAAAAGACAGGAGCAGGATCCTGAGACTTCTTCTTCTCTCTaGTGTCACTCTGCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLSQYILLTKKRQEQDPETSSSL*CHSAPP Trigger: TGGAGGAGCAGAGTGACACCAGAGAGAAGAAGAAGT...CTCAGGATCCTGCTCCTGTCTTTTCTTTGTCAGGAGGATGTACTGGCTGAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGCTGAGTCATACTTGGTGTTTGTTATGGGACTGAACTGCTGCCAAGGAGGACTACCACCAGGTTaGTGGTCTCTTGTTTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AAAESYLVFVMGLNCCQGGLPPG*WSLVFG Trigger: TCCAAAAACAAGAGACCATCAACCTGGTGGTAGTCC...TCCTTGGCAGCAGTTCAGTCCCATAACAAACACCAAGTATGACTCAGCAGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCTCTGGTGTCACTCTGCTCCTCCAGGAACCAGCTGCACTTACTGGTGTACCATCTCTGAAGTATaGGTGATCCTTGAAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLWCHSAPPGTSCTYWCTISEV*VILEED Trigger: GTCTTCTTCAAGGATCACTCATACTTCAGAGATGGT...ACACCAGTAAGTGCAGCTGGTTCCTGGAGGAGCAGAGTGACACCAGAGAGAAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
||
| CDS-3UTR GCA 90 bp | TCCATAGCTCCTCTCTCCTCATCTCCTCAGAGTTTACAAAGGGCTTGCTTGCTTGGCAGAACCACAGGATaGTCTGGGAGAACCACAATT | + |
|
Preference number: 4 (lower is better) Translates to: SIAPLSSSPQSLQRACLLGRTTG*SGRTTI Trigger: AATTGTGGTTCTCCCAGAGCATCCTGTGGTTCTGCC...AAGCAAGCAAGCCCTTTGTAAACTCTGAGGAGATGAGGAGAGAGGAGCTATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCCTTGTAAACCTGGTCCTGGCAGTAGACAATCTGTTCCATCTGGAAGTTGGTCAAGACCCCTATaGTCCTATCCCCTTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RFPCKPGPGSRQSVPSGSWSRPL*SYPLQG Trigger: ACCCTGAAGGGGATAGGACCATAGGGGTCTTGACCA...ACTTCCAGATGGAACAGATTGTCTACTGCCAGGACCAGGTTTACAAGGAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
||
| CDS-3UTR CCA 90 bp | TTGGTGTTTGTTATGGGACTGAACTGCTGCCAAGGAAGACTGAGCTTGCCCCCAACCAGCTGCACTTACTaGTGTCCTGTAAAAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVFVMGLNCCQGRLSLPPTSCTY*CPVKAE Trigger: TTCAGCTTTTACAGGACACCAGTAAGTGCAGCTGGT...TGGGGGCAAGCTCAGTCTTCCTTGGCAGCAGTTCAGTCCCATAACAAACACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR TCA 90 bp | TGTCACTCTGCTCCTCCAGGAACCAGCTGCACTTACTGGTGTCCTGTAAAAGCTTCTCTGAAGTATGAGTaGTCCTTGAAGAAGACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CHSAPPGTSCTYWCPVKASLKYE*SLKKTC Trigger: GCAAGTCTTCTTCAAGGATCACTCATACTTCAGAGA...AGCTTTTACAGGACACCAGTAAGTGCAGCTGGTTCCTGGAGGAGCAGAGTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCTCTGGTGTCACTCTGCTCCTCCAGGAACCAGCTGCACTTACTGGTGTTCTCCTCATAGTGCCTaGACAGATTATTCACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLWCHSAPPGTSCTYWCSPHSA*TDYSQN Trigger: ATTCTGTGAATAATCTGTGCAGGCACTATGAGGAGA...ACACCAGTAAGTGCAGCTGGTTCCTGGAGGAGCAGAGTGACACCAGAGAGAAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
||
| CDS-3UTR CCA 90 bp | TCCATAGCTCCTCTCTCCTCATCTCCTCAGAGTTTACAAAGGGCTTGCTTGCTTACTTCTTCTTCTCTCTaGTGTCACTCTGCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIAPLSSSPQSLQRACLLTSSSL*CHSAPP Trigger: TGGAGGAGCAGAGTGACACCAGAGAGAAGAAGAAGT...AAGCAAGCAAGCCCTTTGTAAACTCTGAGGAGATGAGGAGAGAGGAGCTATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTCAGCCAGTACATCCTCCTGACAAAGAAAAGACAGGAGCAGGATCCTGAGTTTACGAAGGCAGTTTaGACCATCTCTATGGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: VLSQYILLTKKRQEQDPEFTKAV*TISMVL Trigger: TAGGACCATAGAGATGGTCCAAACTGCCTTCGTAAA...CTCAGGATCCTGCTCCTGTCTTTTCTTTGTCAGGAGGATGTACTGGCTGAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113768.8 |
||
| CDS-3UTR TCA 90 bp | GAACTTCAGCTGCTGATTCATTCTTGGTTTCTGCCTGTGGAAAGGACTGGACTAAAGACTTGCTCTTTCTaGAAAGCCTCAGTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELQLLIHSWFLPVERTGLKTCSF*KASVRL Trigger: GAGCCTGACTGAGGCTTTTCAGAAAGAGCAAGTCTT...TAGTCCAGTCCTTTCCACAGGCAGAAACCAAGAATGAATCAGCAGCTGAAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR TCA 90 bp | TGTTATGGGACTGAACTGCTGCCAAGGAAGACTGAGCTTGCCCCCAAAGAACTAATGCTGAAGTATGAGTaGTCCTTGAAGAAGACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CYGTELLPRKTELAPKELMLKYE*SLKKTC Trigger: GCAAGTCTTCTTCAAGGATCACTCATACTTCAGCAT...TAGTTCTTTGGGGGCAAGCTCAGTCTTCCTTGGCAGCAGTTCAGTCCCATAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR TCA 90 bp | CACATGAAAGAATGTTTCCCTGAAGCAGACACAGCTGAAAGGATGCTTTCATATCACAGATGTGGGAGGTaGGCTCCTCAGTCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMKECFPEADTAERMLSYHRCGR*APQSVS Trigger: AGAGACTGACTGAGGAGCTCACCTCCCACATCTGTG...ATATGAAAGCATCCTTTCAGCTGTGTCTGCTTCAGGGAAACATTCTTTCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCTGTGGAAAGGACTGGACTATAGCTGCTGGTTGTATGTGGTGTCTGCCTTTGTAATTTCCTCCTaGTACACATCGTCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FCLWKGLDYSCWLYVVSAFVISS*YTSSVK Trigger: CTTCACTGACGATGTGTATCAGGAGGAAATTACAAA...GGCAGACACCACATACAACCAGCAGCTATAGTCCAGTCCTTTCCACAGGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR TCA 90 bp | TCCATAGCTCCTCTCTCCTCATCTCCTCAGAGTTTACAAAGGGCTTGCTTGCTTTGTTCCATCTGGAAGTaGAGTCGGATCAGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIAPLSSSPQSLQRACLLCSIWK*SRIRFS Trigger: TGAAAACCTGATCCGACTTCACTTCCAGATGGAACA...AAGCAAGCAAGCCCTTTGTAAACTCTGAGGAGATGAGGAGAGAGGAGCTATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTCAGCCAGTACATCCTCCTGACAAAGAAAAGACAGGAGCAGGATCCTGAGTCTCCTCATAGTGCCTaGACAGATTATTCACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLSQYILLTKKRQEQDPESPHSA*TDYSQN Trigger: ATTCTGTGAATAATCTGTGCAGGCACTATGAGGAGA...CTCAGGATCCTGCTCCTGTCTTTTCTTTGTCAGGAGGATGTACTGGCTGAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTGTTTGTTATGGGACTGAACTGCTGCCAAGGAAGACTGAGCTTGCCCCCATCTCCTCATAGTGCCTaGACAGATTATTCACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVFVMGLNCCQGRLSLPPSPHSA*TDYSQN Trigger: ATTCTGTGAATAATCTGTGCAGGCACTATGAGGAGA...TGGGGGCAAGCTCAGTCTTCCTTGGCAGCAGTTCAGTCCCATAACAAACACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR GCA 90 bp | AACTTTTCTCTTCCACTACCTCTGATGGGTGGTGGGCTAAAAGAGAGGTGGAATCATCATAGGAGACTTTaGCTCTCCACTCCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NFSLPLPLMGGGLKERWNHHRRL*LSTPLL Trigger: AAGGAGAGGAGTGGAGAGGCAAAGTCTCCTATGATG...ATTCCACCTCTCTTTTAGCCCACCACCCATCAGAGGTAGTGGAAGAGAAAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR TCA 90 bp | ATAGCATGGTTGAGCTCCACTTGTGGTAACACTGACATTGAGAGAAACTCACCTGGACTACCACCAGGTTaGTGGTCTCTTGTTTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IAWLSSTCGNTDIERNSPGLPPG*WSLVFG Trigger: TCCAAAAACAAGAGACCATCAACCTGGTGGTAGTCC...AGGTGAGTTTCTCTCAATGTCAGTGTTACCACAAGTGGAGCTCAACCATGCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCAGCTTCCTTCTCTCTGATCGTCTTCAAGGTTTCCTTGTAAACCTGGTCAAGACTTGCTCTTTCTaGAAAGCCTCAGTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSFLLSDRLQGFLVNLVKTCSF*KASVRL Trigger: GAGCCTGACTGAGGCTTTTCAGAAAGAGCAAGTCTT...GACCAGGTTTACAAGGAAACCTTGAAGACGATCAGAGAGAAGGAAGCTGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
||
| CDS-3UTR CCA 90 bp | CACTTAGCAAGAATTTTATTGGAAGCGCTAAAGTGGAAACGTCCAGTTTCCTTGTGGTCAAGACCCCTATaGTCCTATCCCCTTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLARILLEALKWKRPVSLWSRPL*SYPLQG Trigger: ACCCTGAAGGGGATAGGACCATAGGGGTCTTGACCA...CAAGGAAACTGGACGTTTCCACTTTAGCGCTTCCAATAAAATTCTTGCTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR CCA 90 bp | CACTTAGCAAGAATTTTATTGGAAGCGCTAAAGTGGAAACGTCCAGTTTCCTTGGTAGACACAGTCACCTaGCAGAACCACAGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLARILLEALKWKRPVSLVDTVT*QNHRML Trigger: GAGCATCCTGTGGTTCTGCCAGGTGACTGTGTCTAC...CAAGGAAACTGGACGTTTCCACTTTAGCGCTTCCAATAAAATTCTTGCTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR GCA 90 bp | CACATGAAAGAATGTTTCCCTGAAGCAGACACAGCTGAAAGGATGCTTTCATATAATTTGGCAAGCTTCTaGCGAGCCTCATCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HMKECFPEADTAERMLSYNLASF*RASSSL Trigger: AAGGCTGGATGAGGCTCGGCAGAAGCTTGCCAAATT...ATATGAAAGCATCCTTTCAGCTGTGTCTGCTTCAGGGAAACATTCTTTCATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| 3UTR CAA 72 bp | CAACATGCATGGAATGGTTTGCCTTACATAGCATGGTaGAGCTCCACTTGTGGTAACACTGACATTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHAWNGLPYIAW*SSTCGNTDIER Trigger: TCTCTCAATGTCAGTGTTACCACAAGTGGAGCTCAACCATGCTATGTAAGGCAAACCATTCCATGCATGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTTGCTTCTGCAGCCTCACCTCAGGCTAGATGGCAAGCTTTCATCAAGATTAAAGCCTCTATGTCATaGAGGATAGTTGTAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: FVASAASPQARWQAFIKIKASMS*RIVVDT Trigger: TGTGTCTACAACTATCCTGCATGACATAGAGGCTTT...AATCTTGATGAAAGCTTGCCATCTAGCCTGAGGTGAGGCTGCAGAAGCAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR TCA 90 bp | CACATGAAAGAATGTTTCCCTGAAGCAGACACAGCTGAAAGGATGCTTTCATATTGTTCCATCTGGAAGTaGAGTCGGATCAGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HMKECFPEADTAERMLSYCSIWK*SRIRFS Trigger: TGAAAACCTGATCCGACTTCACTTCCAGATGGAACA...ATATGAAAGCATCCTTTCAGCTGTGTCTGCTTCAGGGAAACATTCTTTCATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGTTATATCAAATGATGTTTTGCTGGGGTACACAGGTGAAATGATGTCTCTGCTTACACAGATGTaGGAGGTGAGCTCCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLVISNDVLLGYTGEMMSLLTQM*EVSSSV Trigger: GACTGAGGAGCTCACCTCCCACATCTGTGTAAGCAG...AGACATCATTTCACCTGTGTACCCCAGCAAAACATCATTTGATATAACTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR CCA 90 bp | CACTTAGCAAGAATTTTATTGGAAGCGCTAAAGTGGAAACGTCCAGTTTCCTTGACCAGCTGCACTTACTaGTGTCCTGTAAAAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLARILLEALKWKRPVSLTSCTY*CPVKAE Trigger: TTCAGCTTTTACAGGACACCAGTAAGTGCAGCTGGT...CAAGGAAACTGGACGTTTCCACTTTAGCGCTTCCAATAAAATTCTTGCTAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| 3UTR CAA 72 bp | CTAGCTATTCTTTACTATCAACATGCATGGAATGGTTaGCCTTACATAGCATGGTTGAGCTCCACTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAILYYQHAWNG*PYIAWLSSTCG Trigger: ACCACAAGTGGAGCTCAACCATGCTATGTAAGGCAAACCATTCCATGCATGTTGATAGTAAAGAATAGCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS-3UTR TCA 90 bp | CACTTAGCAAGAATTTTATTGGAAGCGCTAAAGTGGAAACGTCCAGTTTCCTTGAGAACTAAGGCATTTTaGGATGCAAACCCTGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HLARILLEALKWKRPVSLRTKAF*DANPAY Trigger: GTAAGCAGGGTTTGCATCTCAAAATGCCTTAGTTCT...CAAGGAAACTGGACGTTTCCACTTTAGCGCTTCCAATAAAATTCTTGCTAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS GCA 90 bp | CCTGCTTACACAGATGTGGGAGGTGAGCTCCTCAGTCAGTCTCTCTaGCAGGCAGGGCACTGTGGCCTTCCCATCTTCCAGAAGAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAYTDVGGELLSQSL*QAGHCGLPIFQKNA Trigger: AGCATTCTTCTGGAAGATGGGAAGGCCACAGTGCCCTGCCTGGCAGAGAGACTGACTGAGGAGCTCACCTCCCACATCTGTGTAAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCTCTGGTGTCACTCTGCTCCTCCAGGAACCAGCTGCACTTACTGGTGTTCCACCAGATCAGGCTaGGTCAAGACCCCTATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLWCHSAPPGTSCTYWCSTRSG*VKTPMV Trigger: GACCATAGGGGTCTTGACCAAGCCTGATCTGGTGGA...ACACCAGTAAGTGCAGCTGGTTCCTGGAGGAGCAGAGTGACACCAGAGAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
||
| CDS TCA 90 bp | CAGTCAGGCTCAGCTGCTCTTGGATGTCCTGCTGACCTCTGCACTTaGCTATCATGTAGCCCTTCTTCAGAGGATACACCAGGTTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QSGSAALGCPADLCT*LSCSPSSEDTPGSA Trigger: TGCGGAACCTGGTGTATCCTCTGAAGAAGGGCTACATGATAGTCAAGTGCAGAGGTCAGCAGGACATCCAAGAGCAGCTGAGCCTGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000232282.3 |
||
| CDS CCA 90 bp | AGAGAACTAAGGCATTTTGAGATGCAAACCCTGCTTACACAGATGTaGGAGGTGAGCTCCTCAGTCAGTCTCTCTGCCAGGCAGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: RELRHFEMQTLLTQM*EVSSSVSLSARQGT Trigger: AGTGCCCTGCCTGGCAGAGAGACTGACTGAGGAGCTCACCTCCCACATCTGTGTAAGCAGGGTTTGCATCTCAAAATGCCTTAGTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR CAA 90 bp | TGTCACTCTGCTCCTCCAGGAACCAGCTGCACTTACTGGTGTCCTGTAAAAGCTATCACATCCAAGACCTaGCCTTCAGCACCTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CHSAPPGTSCTYWCPVKAITSKT*PSAPLS Trigger: GGACAGAGGTGCTGAAGGCAAGGTCTTGGATGTGAT...AGCTTTTACAGGACACCAGTAAGTGCAGCTGGTTCCTGGAGGAGCAGAGTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
||
| CDS TCA 90 bp | ATGAGCTTATCACTGATCCCCAGGCCTACCCCAGCAATGAAGTTCTaGCCCTTGTTAATGGCCTCTTCCACCTCTGAAGGATCAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MSLSLIPRPTPAMKF*PLLMASSTSEGSES Trigger: GCTCTCTGATCCTTCAGAGGTGGAAGAGGCCATTAACAAGGGTCAGAACTTCATTGCTGGGGTAGGCCTGGGGATCAGTGATAAGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
||
| CDS GCA 90 bp | TTGGATGTATGTCTTGATAAGTCTCTTGATCTGGCGTCCTATGTCTaGAGGCTGGTTGCCTACAGCCACCCTGGTAATTCCAGGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LDVCLDKSLDLASYV*RLVAYSHPGNSRQV Trigger: GACCTGCCTGGAATTACCAGGGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTTATCAAGACATACATCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
||
| CDS-3UTR CAA 90 bp | GTGCTCAGCCAGTACATCCTCCTGACAAAGAAAAGACAGGAGCAGGATCCTGAGGGGACTACCACCAGGTaGATGGTCTCTTGTTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLSQYILLTKKRQEQDPEGTTTR*MVSCFW Trigger: CCAAAAACAAGAGACCATCAACCTGGTGGTAGTCCC...CTCAGGATCCTGCTCCTGTCTTTTCTTTGTCAGGAGGATGTACTGGCTGAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS CCA 90 bp | TATGTCTTGATAAGTCTCTTGATCTGGCGTCCTATGTCTGCAGGCTaGTTGCCTACAGCCACCCTGGTAATTCCAGGCAGGTCAATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YVLISLLIWRPMSAG*LPTATLVIPGRSMR Trigger: TCTCATTGACCTGCCTGGAATTACCAGGGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTTATCAAGACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
||
| CDS-3UTR CAA 90 bp | TTTGTTGCTTCTGCAGCCTCACCTCAGGCTAGATGGCAAGCTTTCATCAAGATTTCCACCAGATCAGGCTaGGTCAAGACCCCTATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FVASAASPQARWQAFIKISTRSG*VKTPMV Trigger: GACCATAGGGGTCTTGACCAAGCCTGATCTGGTGGA...AATCTTGATGAAAGCTTGCCATCTAGCCTGAGGTGAGGCTGCAGAAGCAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS-3UTR CAA 90 bp | GAACTTCAGCTGCTGATTCATTCTTGGTTTCTGCCTGTGGAAAGGACTGGACTAATCACATCCAAGACCTaGCCTTCAGCACCTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELQLLIHSWFLPVERTGLITSKT*PSAPLS Trigger: GGACAGAGGTGCTGAAGGCAAGGTCTTGGATGTGAT...TAGTCCAGTCCTTTCCACAGGCAGAAACCAAGAATGAATCAGCAGCTGAAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS CCA 90 bp | ATGGTCTCTTGTTTTTGGATGTATGTCTTGATAAGTCTCTTGATCTaGCGTCCTATGTCTGCAGGCTGGTTGCCTACAGCCACCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: MVSCFWMYVLISLLI*RPMSAGWLPTATLV Trigger: TACCAGGGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTTATCAAGACATACATCCAAAAACAAGAGACCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
||
| CDS GCA 90 bp | CTGAAGGATCAGAGAGCTCCACTTCAATGTCATCATAGGAGACTTTaGCTCTCCACTCCTCTCCTTCTTTCAGCTTCCTCAATTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKDQRAPLQCHHRRL*LSTPLLLSASSISA Trigger: TGCTGAAATTGAGGAAGCTGAAAGAAGGAGAGGAGTGGAGAGGCAAAGTCTCCTATGATGACATTGAAGTGGAGCTCTCTGATCCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232193.3 ENSMUST00000232282.3 |
||
| CDS-3UTR CAA 90 bp | AGCAACGGAGCCTTGGCTTGGTTTGCTCTGTCTAGCTATTCTTTACTATCAACAGGGACTACCACCAGGTaGATGGTCTCTTGTTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SNGALAWFALSSYSLLSTGTTTR*MVSCFW Trigger: CCAAAAACAAGAGACCATCAACCTGGTGGTAGTCCC...TGTTGATAGTAAAGAATAGCTAGACAGAGCAAACCAAGCCAAGGCTCCGTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| CDS-3UTR CAA 90 bp | TGTTATGGGACTGAACTGCTGCCAAGGAAGACTGAGCTTGCCCCCAAAGAACTAGGGTTTATTAATGCCTaGGTCTTCTCTTTCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CYGTELLPRKTELAPKELGFINA*VFSFSA Trigger: AGCTGAGAAAGAGAAGACCAAGGCATTAATAAACCC...TAGTTCTTTGGGGGCAAGCTCAGTCTTCCTTGGCAGCAGTTCAGTCCCATAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
||
| CDS CCA 90 bp | TCCACATTGCTGGGGACTACCACCAGGTTGATGGTCTCTTGTTTTTaGATGTATGTCTTGATAAGTCTCTTGATCTGGCGTCCTATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: STLLGTTTRLMVSCF*MYVLISLLIWRPMS Trigger: AGACATAGGACGCCAGATCAAGAGACTTATCAAGACATACATCCAAAAACAAGAGACCATCAACCTGGTGGTAGTCCCCAGCAATGTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
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| CDS CCA 90 bp | ACTAAAGCCTCTATGTCATGCAGGATAGTTGTAGACACAGTCACCTaGCAGAACCACAGGATGCTCTGGGAGAACCACAATTCTTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TKASMSCRIVVDTVT*QNHRMLWENHNSLL Trigger: TAACAAAGAATTGTGGTTCTCCCAGAGCATCCTGTGGTTCTGCCAGGTGACTGTGTCTACAACTATCCTGCATGACATAGAGGCTTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
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| CDS-3UTR CAA 90 bp | CACTTAGCAAGAATTTTATTGGAAGCGCTAAAGTGGAAACGTCCAGTTTCCTTGGAGAACCACAATTCTTaGTTATCCATGGGAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLARILLEALKWKRPVSLENHNS*LSMGGS Trigger: GGACCCTCCCATGGATAACAAAGAATTGTGGTTCTC...CAAGGAAACTGGACGTTTCCACTTTAGCGCTTCCAATAAAATTCTTGCTAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
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| CDS-3UTR CAA 90 bp | GCAACGGAGCCTTGGCTTGGTTTGCTCTGTCTAGCTATTCTTTACTATCAACATGGGTTTATTAATGCCTaGGTCTTCTCTTTCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATEPWLGLLCLAILYYQHGFINA*VFSFSA Trigger: AGCTGAGAAAGAGAAGACCAAGGCATTAATAAACCC...ATGTTGATAGTAAAGAATAGCTAGACAGAGCAAACCAAGCCAAGGCTCCGTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| CDS-3UTR CAA 90 bp | AACTTTTCTCTTCCACTACCTCTGATGGGTGGTGGGCTAAAAGAGAGGTGGAATGATGGTCTCTTGTTTTaGGATGTATGTCTTGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: NFSLPLPLMGGGLKERWNDGLLF*DVCLDK Trigger: CTTATCAAGACATACATCCAAAAACAAGAGACCATC...ATTCCACCTCTCTTTTAGCCCACCACCCATCAGAGGTAGTGGAAGAGAAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| CDS-3UTR CAA 90 bp | CGTCTTCAAGGTTTCCTTGTAAACCTGGTCCTGGCAGTAGACAATCTGTTCCATGATGGTCTCTTGTTTTaGGATGTATGTCTTGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: RLQGFLVNLVLAVDNLFHDGLLF*DVCLDK Trigger: CTTATCAAGACATACATCCAAAAACAAGAGACCATC...ATGGAACAGATTGTCTACTGCCAGGACCAGGTTTACAAGGAAACCTTGAAGACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
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| CDS-3UTR CAA 90 bp | GCAACGGAGCCTTGGCTTGGTTTGCTCTGTCTAGCTATTCTTTACTATCAACATGATGGTCTCTTGTTTTaGGATGTATGTCTTGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: ATEPWLGLLCLAILYYQHDGLLF*DVCLDK Trigger: CTTATCAAGACATACATCCAAAAACAAGAGACCATC...ATGTTGATAGTAAAGAATAGCTAGACAGAGCAAACCAAGCCAAGGCTCCGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 |
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| CDS CAA 72 bp | AGTCTCTTGATCTGGCGTCCTATGTCTGCAGGCTGGTaGCCTACAGCCACCCTGGTAATTCCAGGCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLLIWRPMSAGW*PTATLVIPGRS Trigger: TGACCTGCCTGGAATTACCAGGGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
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| CDS CCA 72 bp | ATAAGTCTCTTGATCTGGCGTCCTATGTCTGCAGGCTaGTTGCCTACAGCCACCCTGGTAATTCCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ISLLIWRPMSAG*LPTATLVIPGR Trigger: CCTGCCTGGAATTACCAGGGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
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| CDS TCA 72 bp | TCACTGATCCCCAGGCCTACCCCAGCAATGAAGTTCTaGCCCTTGTTAATGGCCTCTTCCACCTCTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLIPRPTPAMKF*PLLMASSTSEG Trigger: TCCTTCAGAGGTGGAAGAGGCCATTAACAAGGGTCAGAACTTCATTGCTGGGGTAGGCCTGGGGATCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
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| CDS CCA 72 bp | AGGCATTTTGAGATGCAAACCCTGCTTACACAGATGTaGGAGGTGAGCTCCTCAGTCAGTCTCTCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RHFEMQTLLTQM*EVSSSVSLSAR Trigger: CCTGGCAGAGAGACTGACTGAGGAGCTCACCTCCCACATCTGTGTAAGCAGGGTTTGCATCTCAAAATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
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| CDS CAA 90 bp | GTCTTGATAAGTCTCTTGATCTGGCGTCCTATGTCTGCAGGCTGGTaGCCTACAGCCACCCTGGTAATTCCAGGCAGGTCAATGAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VLISLLIWRPMSAGW*PTATLVIPGRSMRV Trigger: GACTCTCATTGACCTGCCTGGAATTACCAGGGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTTATCAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
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| CDS GCA 72 bp | TGTCTTGATAAGTCTCTTGATCTGGCGTCCTATGTCTaGAGGCTGGTTGCCTACAGCCACCCTGGTAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: CLDKSLDLASYV*RLVAYSHPGNS Trigger: GGAATTACCAGGGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTTATCAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
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| CDS CCA 72 bp | GTAGACACAGTCACCTGGCAGAACCACAGGATGCTCTaGGAGAACCACAATTCTTTGTTATCCATGGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VDTVTWQNHRML*ENHNSLLSMGG Trigger: CCCTCCCATGGATAACAAAGAATTGTGGTTCTCCCAGAGCATCCTGTGGTTCTGCCAGGTGACTGTGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
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| CDS CAA 90 bp | GAAGACTTGCTCTTTCTGAAAAGCCTCAGTCAGGCTCAGCTGCTCTaGGATGTCCTGCTGACCTCTGCACTTGACTATCATGTAGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EDLLFLKSLSQAQLL*DVLLTSALDYHVAL Trigger: AAGGGCTACATGATAGTCAAGTGCAGAGGTCAGCAGGACATCCAAGAGCAGCTGAGCCTGACTGAGGCTTTTCAGAAAGAGCAAGTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023655.13 ENSMUST00000232282.3 |
||
| CDS GCA 72 bp | CAGAGAGCTCCACTTCAATGTCATCATAGGAGACTTTaGCTCTCCACTCCTCTCCTTCTTTCAGCTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: QRAPLQCHHRRL*LSTPLLLSASS Trigger: TGAGGAAGCTGAAAGAAGGAGAGGAGTGGAGAGGCAAAGTCTCCTATGATGACATTGAAGTGGAGCTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232193.3 ENSMUST00000232282.3 |
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| CDS CCA 72 bp | TCTATGTCATGCAGGATAGTTGTAGACACAGTCACCTaGCAGAACCACAGGATGCTCTGGGAGAACCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: SMSCRIVVDTVT*QNHRMLWENHN Trigger: ATTGTGGTTCTCCCAGAGCATCCTGTGGTTCTGCCAGGTGACTGTGTCTACAACTATCCTGCATGACATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS CAA 90 bp | AGGTTGATGGTCTCTTGTTTTTGGATGTATGTCTTGATAAGTCTCTaGATCTGGCGTCCTATGTCTGCAGGCTGGTTGCCTACAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: RLMVSCFWMYVLISL*IWRPMSAGWLPTAT Trigger: GGTGGCTGTAGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTTATCAAGACATACATCCAAAAACAAGAGACCATCAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
||
| CDS TCA 72 bp | GAAGTTCTGACCCTTGTTAATGGCCTCTTCCACCTCTaGAGGATCAGAGAGCTCCACTTCAATGTCATCATA | + |
|
Preference number: 6 (lower is better) Translates to: EVLTLVNGLFHL*RIRELHFNVII Trigger: TATGATGACATTGAAGTGGAGCTCTCTGATCCTTCAGAGGTGGAAGAGGCCATTAACAAGGGTCAGAACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
||
| CDS CCA 72 bp | CTGGGGACTACCACCAGGTTGATGGTCTCTTGTTTTTaGATGTATGTCTTGATAAGTCTCTTGATCTGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LGTTTRLMVSCF*MYVLISLLIWR Trigger: ACGCCAGATCAAGAGACTTATCAAGACATACATCCAAAAACAAGAGACCATCAACCTGGTGGTAGTCCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
||
| CDS CAA 72 bp | GTCTCTTGTTTTTGGATGTATGTCTTGATAAGTCTCTaGATCTGGCGTCCTATGTCTGCAGGCTGGTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VSCFWMYVLISL*IWRPMSAGWLP Trigger: AGGCAACCAGCCTGCAGACATAGGACGCCAGATCAAGAGACTTATCAAGACATACATCCAAAAACAAGAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
||
| CDS GCA 72 bp | AAAGTTGTCACAGAAGTGACTAAAGCCTCTATGTCATaGAGGATAGTTGTAGACACAGTCACCTGGCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KVVTEVTKASMS*RIVVDTVTWQN Trigger: GTTCTGCCAGGTGACTGTGTCTACAACTATCCTGCATGACATAGAGGCTTTAGTCACTTCTGTGACAACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
||
| CDS CAA 72 bp | GATAAAATCTTTACGAAGGCAGTTTGGACCATCTCCTaGTTAATGGCCTCTTCCACCTCTGAAGGATCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: DKIFTKAVWTIS*LMASSTSEGSE Trigger: CTCTGATCCTTCAGAGGTGGAAGAGGCCATTAACAAGGAGATGGTCCAAACTGCCTTCGTAAAGATTTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232193.3 |
||
| CDS CAA 72 bp | ACCAGGTTGATGGTCTCTTGTTTTTGGATGTATGTCTaGATAAGTCTCTTGATCTGGCGTCCTATGTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TRLMVSCFWMYV*ISLLIWRPMSA Trigger: TGCAGACATAGGACGCCAGATCAAGAGACTTATCAAGACATACATCCAAAAACAAGAGACCATCAACCTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
||
| CDS CAA 72 bp | CACATTGCTGGGGACTACCACCAGGTTGATGGTCTCTaGTTTTTGGATGTATGTCTTGATAAGTCTCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: HIAGDYHQVDGL*FLDVCLDKSLD Trigger: ATCAAGAGACTTATCAAGACATACATCCAAAAACAAGAGACCATCAACCTGGTGGTAGTCCCCAGCAATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023655.13 ENSMUST00000113768.8 ENSMUST00000232282.3 |
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| CDS CAA 90 bp | AAATCATTTGATAAAATCTTTACGAAGGCAGTTTGGACCATCTCCTaGTTAATGGCCTCTTCCACCTCTGAAGGATCAGAGAGCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: KSFDKIFTKAVWTIS*LMASSTSEGSESST Trigger: AGTGGAGCTCTCTGATCCTTCAGAGGTGGAAGAGGCCATTAACAAGGAGATGGTCCAAACTGCCTTCGTAAAGATTTTATCAAATGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232193.3 |
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| CDS TCA 72 bp | ATCTTTACGAAGGCAGTTTGGACCATCTCTGAAGTATaGGTGATCCTTGAAGAAGACTTGCTCTTTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: IFTKAVWTISEV*VILEEDLLFLK Trigger: TTTCAGAAAGAGCAAGTCTTCTTCAAGGATCACTCATACTTCAGAGATGGTCCAAACTGCCTTCGTAAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232282.3 |
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| CDS CCA 72 bp | CCAAAATCATTTGATAAAATCTTTACGAAGGCAGTTTaGACCATCTCCTTGTTAATGGCCTCTTCCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: PKSFDKIFTKAV*TISLLMASSTS Trigger: AGAGGTGGAAGAGGCCATTAACAAGGAGATGGTCCAAACTGCCTTCGTAAAGATTTTATCAAATGATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232193.3 |
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| CDS CCA 72 bp | CCAAAATCATTTGATAAAATCTTTACGAAGGCAGTTTaGACCATTCTGTATAGACTGGAAAGGAAAGTAATG | + |
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Preference number: 6 (lower is better) Translates to: PKSFDKIFTKAV*TILYRLERKVM Trigger: CATTACTTTCCTTTCCAGTCTATACAGAATGGTCCAAACTGCCTTCGTAAAGATTTTATCAAATGATTTTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023655.13 |
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