Pregenerated sensors for MVP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030681Ensembl transcript IDs: ENSMUST00000165096.9
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCAGGGGCCCTCGGATaGGCCAGCGGTCTCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RVAASEDLVKQAFLGAGPPGALG*ASGLQP Trigger: AGGCTGGAGACCGCTGGCTCATCCGAGGGCCCCTGG...CGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | AGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCCCACAGCCAAGTCCCTaGTGGTTCCGGGGCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SGCFRGPGKASLPWGWAAPQPSP*WFRGPV Trigger: CACTGGGCCCCGGAACCATCAGGGACTTGGCTGTGG...GGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | AGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCGGTCTCCAGCCTGGTaGGCGACCTTCTCCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: RVAASEDLVKQAFLGAGPRSPAW*ATFSSP Trigger: GGGGGAGGAGAAGGTCGCCCACCAGGCTGGAGACCG...CGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | GTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCACCACCTGCAGCGGGGTaGTGTCCTTTTCCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VAASEDLVKQAFLGAGPPPPAAG*CPFPAA Trigger: AGCTGCTGGAAAAGGACATCACCCCGCTGCAGGTGG...TGGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | GTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCAGAGCCCCTGCTGCTCTaGCAGCACGTACACATCCTG | + |
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Preference number: 4 (lower is better) Translates to: VAASEDLVKQAFLGAGPPEPLLL*QHVHIL Trigger: CAGGATGTGTACGTGCTGTCAGAGCAGCAGGGGCTC...TGGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | GTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCAGTACACCTGCACCGCTaGGTTGTGGGGGACACGGTA | + |
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Preference number: 4 (lower is better) Translates to: VAASEDLVKQAFLGAGPPVHLHR*VVGDTV Trigger: TACCGTGTCCCCCACAACGCAGCGGTGCAGGTGTAC...TGGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | CAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGTCGGCGAGCTGCTGTaGCTTGCTCACCTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QSGCFRGPGKASLPWGWAVGELL*LAHLQL Trigger: GAGCTGGAGGTGAGCAAGGCACAGCAGCTCGCCGAC...GGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | AGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCAGAGGGAAGGGGTCCTaGGCTAGTCGGATCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGCFRGPGKASLPWGWAARGKGS*ASRISW Trigger: CCAGGAGATCCGACTAGCCCAGGACCCCTTCCCTCT...GGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | GTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCAGATGCAGGGCAGTGTTaGGCAGAACCACCTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: VAASEDLVKQAFLGAGPPDAGQC*AEPPAA Trigger: CGCTGCAGGTGGTTCTGCCCAACACTGCCCTGCATC...TGGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | AGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCTCTGAGCCTCGTGCTTaGCTGCTGCCTCCTGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SGCFRGPGKASLPWGWAASEPRA*LLPPGS Trigger: ACTCCCAGGAGGCAGCAGCCAAGCACGAGGCTCAGA...GGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | CACAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCTTGCAGCTGAGGGCTaGAGGACCTTGGCTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: HRVAASEDLVKQAFLGAGLAAEG*RTLAVP Trigger: GGGCACAGCCAAGGTCCTTCAGCCCTCAGCTGCAAG...CCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | AGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGTTTTGTACAGGTGGCTaGCCGTCAGACCCCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RVAASEDLVKQAFLGAGPFCTGG*PSDPSP Trigger: GGGGCTGGGGTCTGACGGTCAGCCACCTGTACAAAA...CGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | GTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCAAGGTCCTTGAAGTTTTaGCGAGCCCGGAGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VAASEDLVKQAFLGAGPPRSLKF*RARRCR Trigger: CCTGCACCTCCGGGCTCGGCAAAACTTCAAGGACCT...TGGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | AGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGAGCCTCGTGCTTGGCTaGTGCCTCCTGGGAGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: RVAASEDLVKQAFLGAGPSLVLG*CLLGVG Trigger: ACCAACTCCCAGGAGGCAGCAGCCAAGCACGAGGCT...CGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | AGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGGCAGTAGTGGCGTGGTaGGACCGTCACCATGCGAAC | + |
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Preference number: 4 (lower is better) Translates to: RVAASEDLVKQAFLGAGPAVVAW*DRHHAN Trigger: GTTCGCATGGTGACGGTCCCACCACGCCACTACTGC...CGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | GTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCAAACAACACAGAACTCTaGGCGTCCCGGGACACAGGG | + |
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Preference number: 4 (lower is better) Translates to: VAASEDLVKQAFLGAGPPNNTEL*ASRDTG Trigger: CCCTGTGTCCCGGGACGCCCAGAGTTCTGTGTTGTT...TGGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | CACAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGATTCCTTGCGGGCCCTaGGCCGCAGAGCTTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRVAASEDLVKQAFLGAGIPCGP*AAELGS Trigger: AGAACCAAGCTCTGCGGCTCAGGGCCCGCAAGGAAT...CCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | GTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCAGTGGGACCGTCACCATaGGAACTGGGGCAAACAGTA | + |
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Preference number: 4 (lower is better) Translates to: VAASEDLVKQAFLGAGPPVGPSP*ELGQTV Trigger: TACTGTTTGCCCCAGTTCGCATGGTGACGGTCCCAC...TGGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | GTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCACGCTTTTGTCCCAGCTaGTTCTTGCCATCTGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VAASEDLVKQAFLGAGPPRFCPS*FLPSGP Trigger: GGGACCAGATGGCAAGAACCAGCTGGGACAAAAGCG...TGGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | AGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCCGTACACATCCTGGATaGCTCGTTCCAGCCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SGCFRGPGKASLPWGWAARTHPG*LVPAFL Trigger: GAGAAAGGCTGGAACGAGGCATCCAGGATGTGTACG...GGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | GTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCAGAGTCAGCATGTAGGTaGTTCCAATCACAGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: VAASEDLVKQAFLGAGPPESACR*FQSQPA Trigger: TGCGGGCTGTGATTGGAAGCACCTACATGCTGACTC...TGGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | GTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCACCTTGGCATTACCAGTaGTCTCCACAGCCATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VAASEDLVKQAFLGAGPPPWHYQ*SPQPCS Trigger: TGAGCATGGCTGTGGAGAGCACTGGTAATGCCAAGG...TGGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | CAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCTTCAGGCCCAGGGACTaGAGAAGTTTCACCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: QSGCFRGPGKASLPWGWAFRPRD*RSFTCI Trigger: GATGCAGGTGAAACTTCTTCAGTCCCTGGGCCTGAA...GGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | GTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCACAGCCTGGCATGATCTaGAGTTTCGATGGTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: VAASEDLVKQAFLGAGPPQPGMI*SFDGDD Trigger: GTCATCACCATCGAAACTGCAGATCATGCCAGGCTG...TGGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | CAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCCCGGATGTAGGTCTTTaGTCCAACCTCTACACGGGA | + |
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Preference number: 4 (lower is better) Translates to: QSGCFRGPGKASLPWGWAPDVGL*SNLYTG Trigger: TCCCGTGTAGAGGTTGGACCAAAGACCTACATCCGG...GGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | CACAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGACTCAGCCTCCGCCTTaGCATTACCAGTGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HRVAASEDLVKQAFLGAGTQPPP*HYQCSP Trigger: TGGAGAGCACTGGTAATGCCAAGGCGGAGGCTGAGT...CCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | CACAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCAGCCTCCGTCTCAATaGCTAACGCCTGCGCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: HRVAASEDLVKQAFLGAGQPPSQ*LTPAPL Trigger: TAAAGGCGCAGGCGTTAGCCATTGAGACGGAGGCTG...CCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | AGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGTTGATGACTGTGGCCTaGATGATCTCCACGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: RVAASEDLVKQAFLGAGPLMTVA*MISTTS Trigger: GGAAGTCGTGGAGATCATTCAGGCCACAGTCATCAA...CGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | CACAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGAAAGGGACAACACTGTaGACTGCTCCTCGGGATCCA | + |
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Preference number: 4 (lower is better) Translates to: HRVAASEDLVKQAFLGAGKGTTL*TAPRDP Trigger: TGGATCCCGAGGAGCAGTTCACAGTGTTGTCCCTTT...CCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | CACAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCTGAGCCGCAGAGCTTaGTTCTGTTTGATGACTGTG | + |
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Preference number: 4 (lower is better) Translates to: HRVAASEDLVKQAFLGAGLSRRA*FCLMTV Trigger: CACAGTCATCAAACAGAACCAAGCTCTGCGGCTCAG...CCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | CACAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGAGCCTTTCTCCTGGCTaGAGGAAAAAGGACTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HRVAASEDLVKQAFLGAGSLSPG*RKKDFS Trigger: AGAGAAGTCCTTTTTCCTCCAGCCAGGAGAAAGGCT...CCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | CAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACGAGGTCCCAGGGTGGTaGTGGGCACCACCCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QLSFYLSIVSVVSVYLRHEVPGW*WAPPPA Trigger: TGCTGGGGGTGGTGCCCATCACCACCCTGGGACCTC...GTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | GTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTTCCTCCCCAGTGCGGTaGGCCACTCCCCGAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VILFIHCQCSQCLPKAQSSSPVR*ATPRRS Trigger: GGACCTTCGGGGAGTGGCCCACCGCACTGGGGAGGA...ACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | GTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGCACGACGGGCATaGGGACGCTTGGGTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VVILFIHCQCSQCLPKAQSARRA*GRLGRP Trigger: TGGGCGACCCAAGCGTCCTCATGCCCGTCGTGCACT...CTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | GTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGCCATTCCTCCCCAGTaGGGTGGGCCACTCCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: VILFIHCQCSQCLPKAQSAIPPQ*GGPLPE Trigger: TTCGGGGAGTGGCCCACCGCACTGGGGAGGAATGGC...ACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | GTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGCTGGACACTGCGCTaGAGGGCATCCCGGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VVILFIHCQCSQCLPKAQSWTLR*RASRVL Trigger: GAGGACCCGGGATGCCCTGCAGCGCAGTGTCCAGCT...CTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | GTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTCAGCGGTCTCCAGCCTaGTGGGCGACCTTCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VILFIHCQCSQCLPKAQSQRSPA*WATFSS Trigger: GGAGGAGAAGGTCGCCCACCAGGCTGGAGACCGCTG...ACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | CAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACGGGGGACACGGTAGCTaGCCACTCGGGTCTTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QLSFYLSIVSVVSVYLRHGGHGS*PLGSCS Trigger: GGAACAAGACCCGAGTGGTCAGCTACCGTGTCCCCC...GTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | CAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACCAGCAGCAGGCAGAGTaGACGACGGGCATGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: QLSFYLSIVSVVSVYLRHQQQAE*TTGMRT Trigger: CGTCCTCATGCCCGTCGTGCACTCTGCCTGCTGCTG...GTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | GTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGCATCCCGGGTCCTCTaGTCCACAGGCTCCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: VILFIHCQCSQCLPKAQSASRVL*STGSTD Trigger: GTCAGTGGAGCCTGTGGACCAGAGGACCCGGGATGC...ACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGGTCCACAGGCTCCACTaGCTGCACGTCCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVVHRLH*LHVHTA Trigger: AGCAGTGTGGACGTGCAGTCAGTGGAGCCTGTGGAC...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | GTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTTGCCGAGCCCGGAGGTaGAGGGCCGTCTTTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: VILFIHCQCSQCLPKAQSCRARR*RAVFSV Trigger: TACAGAAAAGACGGCCCTGCACCTCCGGGCTCGGCA...ACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGCCCGGGACACAGGGTTaGCCACTATGCAGTAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVPGTQG*PLCSSG Trigger: GCCACTACTGCATAGTGGCCAACCCTGTGTCCCGGG...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGCTTCAGTTGCCATGGTaGATCCCAAGCCCCGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVLQLPW*IPSPGL Trigger: TAGGCCGGGGCTTGGGATTCACCATGGCAACTGAAG...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | CTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGAGGGCTGAAGGACCTTaGCTGTGCCCTTCTGACCCC | + |
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Preference number: 4 (lower is better) Translates to: LQLSFYLSIVSVVSVYLRRAEGP*LCPSDP Trigger: GGGGTCAGAAGGGCACAGCCAAGGTCCTTCAGCCCT...CCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGCCTGCGCCTTTAGCTTaGCCTGCAGCACAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVPAPLA*PAAQSL Trigger: AAGGCTCTGTGCTGCAGGCCAAGCTAAAGGCGCAGG...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | TCTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGTCCTGCTCCAGTCTCTaGGCCTCGTGCTTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: STVVILFIHCQCSQCLPKSCSSL*ASCLAA Trigger: AGCAGCCAAGCACGAGGCTCAGAGACTGGAGCAGGA...CTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | CTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCAGGGTTGGCCACTATaGAGTAGTGGCGTGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQLSFYLSIVSVVSVYLRQGWPL*SSGVVG Trigger: TCCCACCACGCCACTACTGCATAGTGGCCAACCCTG...CCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACTTGGGCAGAACCACCTaGAGCGGGGTGATGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLSFYLSIVSVVSVYLRHLGRTT*SGVMSF Trigger: AAAGGACATCACCCCGCTGCAGGTGGTTCTGCCCAA...GTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | ACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCATTCAGCAGGAGCCCCTaGTGCTCTGACAGCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TVVILFIHCQCSQCLPKAFSRSP*CSDSTY Trigger: GTACGTGCTGTCAGAGCAGCAGGGGCTCCTGCTGAA...TGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR GCA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGACAGGCTCCACTGACTaGACGTCCACACTGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVTGSTD*TSTLLT Trigger: TGTGAGCAGTGTGGACGTGCAGTCAGTGGAGCCTGT...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR GCA 90 bp | CTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGGCCTTTAGCTTGGCCTaGAGCACAGAGCCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQLSFYLSIVSVVSVYLRAFSLA*STEPSP Trigger: GGGAGAAGGCTCTGTGCTGCAGGCCAAGCTAAAGGC...CCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR GCA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGTCAATGGCTAACGCCTaGGCCTTTAGCTTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVSMANA*AFSLAC Trigger: GCAGGCCAAGCTAAAGGCGCAGGCGTTAGCCATTGA...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCAGGTTCCGGGGCCCAGTaGCTCTGTCATCTCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVVILFIHCQCSQCLPKAGSGAQ*LCHLLE Trigger: TTCAAGGAGATGACAGAGGCACTGGGCCCCGGAACC...TGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR CCA 90 bp | CTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGTATGCAGTAGTGGCGTaGTGGGACCGTCACCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: LQLSFYLSIVSVVSVYLRYAVVA*WDRHHA Trigger: CGCATGGTGACGGTCCCACCACGCCACTACTGCATA...CCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR CCA 90 bp | GTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGTTCCACCTCCTTCTGTaGGATGTAGGTGCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVILFIHCQCSQCLPKAQFHLLL*DVGARS Trigger: GGACCTGGCACCTACATCCCACAGAAGGAGGTGGAA...CTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR CCA 90 bp | GTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTCCACACGGGCTCTCTTaGCTCTGTAGTCGTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: VILFIHCQCSQCLPKAQSPHGLS*LCSRTP Trigger: AGGTGTACGACTACAGAGCCAAGAGAGCCCGTGTGG...ACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR CCA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGACAACCAGCCCATTTTaGGGAAAGACGGCCCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVTTSPF*GKTARS Trigger: AGACCGGGCCGTCTTTCCCCAAAATGGGCTGGTTGT...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | ACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCAAGCTGCAGCCTGGCATaGTCTGCAGTTTCGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVVILFIHCQCSQCLPKASCSLA*SAVSMV Trigger: CACCATCGAAACTGCAGATCATGCCAGGCTGCAGCT...TGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR GCA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGGACAACACTGTGAACTaGTCCTCGGGATCCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVDNTVN*SSGSSD Trigger: GTCACTGGATCCCGAGGAGCAGTTCACAGTGTTGTC...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGATGGATGTAGTGGTATaGGGGGATGCGGATGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVMDVVV*GDADDG Trigger: GCCATCATCCGCATCCCCCCATACCACTACATCCAT...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | TCTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGCTCCACTTTGGCAGATaGCACATACTCCAGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: STVVILFIHCQCSQCLPKLHFGR*HILQGP Trigger: GGGCCCCTGGAGTATGTGCCATCTGCCAAAGTGGAG...CTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | TCTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGTTTCACCTGCATCTCTaGCCCGGCCACAGCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: STVVILFIHCQCSQCLPKFHLHL*PGHSQV Trigger: GACTTGGCTGTGGCCGGGCCAGAGATGCAGGTGAAA...CTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCAGATGGCCTCTTCAGTTaGCATGGTGAATCCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVVILFIHCQCSQCLPKADGLFS*HGESQA Trigger: GGCTTGGGATTCACCATGGCAACTGAAGAGGCCATC...TGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | CTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGAGCAATGCCTTCAGATaGAGGGCAGTGTTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQLSFYLSIVSVVSVYLRSNAFR*RAVLGR Trigger: TCTGCCCAACACTGCCCTGCATCTGAAGGCATTGCT...CCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR GCA 90 bp | CTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCAGCCACTCGTCTCCTaGCATGACCTTGTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LQLSFYLSIVSVVSVYLRQPLVS*HDLVSI Trigger: AATGGAGACAAGGTCATGGCAGGAGACGAGTGGCTG...CCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR GCA 90 bp | TCTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGCTCCTTGAACTTCTTTaGCTCCACGTCGGCGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STVVILFIHCQCSQCLPKLLELL*LHVGEL Trigger: CAGCTCGCCGACGTGGAGGCAAAGAAGTTCAAGGAG...CTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | TCTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGCGTCACCATGCGAACTaGGGCAAACAGTACCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STVVILFIHCQCSQCLPKRHHAN*GKQYPL Trigger: GAGAGGGTACTGTTTGCCCCAGTTCGCATGGTGACG...CTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | GTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGCTGGTTCTTGCCATCTaGTCCCATTGGGTCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVILFIHCQCSQCLPKAQLVLAI*SHWVKD Trigger: ATCCTTGACCCAATGGGACCAGATGGCAAGAACCAG...CTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | TCTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCTGCAGCTGCAGCCTaGCATGATCTGCAGTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: STVVILFIHCQCSQCLPKAAAAA*HDLQFR Trigger: TCGAAACTGCAGATCATGCCAGGCTGCAGCTGCAGC...CTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | TCTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGATTTCGATGGCTAGCTaGACACTGCGCTGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STVVILFIHCQCSQCLPKISMAS*TLRCRA Trigger: TGCCCTGCAGCGCAGTGTCCAGCTAGCCATCGAAAT...CTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | GTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGACTCGTCTCCTGCCATaGCCTTGTCTCCATTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VVILFIHCQCSQCLPKAQTRLLP*PCLHSY Trigger: ATAAGAATGGAGACAAGGTCATGGCAGGAGACGAGT...CTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | CAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACGGCTTTTTCAGCTTCTaGCTGGTCCAAGATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLSFYLSIVSVVSVYLRHGFFSF*LVQDLL Trigger: CAGAAGATCTTGGACCAGTCAGAAGCTGAAAAAGCC...GTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGTTCAAAGTCCAGCAATaGCTTCAGATGCAGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVFKVQQ*LQMQGS Trigger: ACTGCCCTGCATCTGAAGGCATTGCTGGACTTTGAA...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR GCA 90 bp | CTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGACTGCACGTCCACACTaGTCACAACCAGCCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQLSFYLSIVSVVSVYLRTARPH*SQPAHF Trigger: AAAATGGGCTGGTTGTGAGCAGTGTGGACGTGCAGT...CCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | CAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACTTCCAGCCTTTCTCCTaGCTGGAGGAAAAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: QLSFYLSIVSVVSVYLRHFQPFS*LEEKGL Trigger: AAGTCCTTTTTCCTCCAGCCAGGAGAAAGGCTGGAA...GTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CCA 90 bp | ACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCATTGGCTGCTGCCTCCTaGGAGTTGGTTGTAATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TVVILFIHCQCSQCLPKALAAAS*ELVVIS Trigger: CGAAATTACAACCAACTCCCAGGAGGCAGCAGCCAA...TGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | CAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACGCGAATGATACGTGCTaGGTTCTTATGGAAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QLSFYLSIVSVVSVYLRHANDTC*VLMEVI Trigger: GATGACTTCCATAAGAACTCAGCACGTATCATTCGC...GTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR TCA 90 bp | TCTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGCCTCTGTCATCTCCTTaGACTTCTTTGCCTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: STVVILFIHCQCSQCLPKPLSSP*TSLPPR Trigger: ACGTGGAGGCAAAGAAGTTCAAGGAGATGACAGAGG...CTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR CCA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGTTTTCAGCTTCTGACTaGTCCAAGATCTTCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVFSASD*SKIFCL Trigger: GAGGCAGAAGATCTTGGACCAGTCAGAAGCTGAAAA...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR TCA 90 bp | GTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTAAACAGCCATGCGAATaGTACGTGCTGAGTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VILFIHCQCSQCLPKAQSKQPCE*YVLSSY Trigger: ATAAGAACTCAGCACGTATCATTCGCATGGCTGTTT...ACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR GCA 90 bp | CTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCATCCTGAACATAGATaGCCTCATTTTGGTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQLSFYLSIVSVVSVYLRHPEHR*PHFGPE Trigger: CTCTGGACCAAAATGAGGGCATCTATGTTCAGGATG...CCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR CCA 90 bp | CTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCGTGCTGAGTTCTTATaGAAGTCATCAAATGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LQLSFYLSIVSVVSVYLRRAEFL*KSSNVT Trigger: GGTCACATTTGATGACTTCCATAAGAACTCAGCACG...CCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS CCA 90 bp | GGCTCCACTGACTGCACGTCCACACTGCTCACAACCAGCCCATTTTaGGGAAAGACGGCCCGGTCTCGAGCCCTGGGCAGGAGTGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSTDCTSTLLTTSPF*GKTARSRALGRSAP Trigger: TGGCGCACTCCTGCCCAGGGCTCGAGACCGGGCCGTCTTTCCCCAAAATGGGCTGGTTGTGAGCAGTGTGGACGTGCAGTCAGTGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS GCA 90 bp | CCCGGGTCCTCTGGTCCACAGGCTCCACTGACTGCACGTCCACACTaGTCACAACCAGCCCATTTTGGGGAAAGACGGCCCGGTCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGSSGPQAPLTARPH*SQPAHFGERRPGLE Trigger: CTCGAGACCGGGCCGTCTTTCCCCAAAATGGGCTGGTTGTGAGCAGTGTGGACGTGCAGTCAGTGGAGCCTGTGGACCAGAGGACCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS GCA 90 bp | CTTGGCCTGCAGCACAGAGCCTTCTCCCTCAATCCTCGCTGCCTCTaGCCGGGACTCAGCCTCCGCCTTGGCATTACCAGTGCTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGLQHRAFSLNPRCL*PGLSLRLGITSALH Trigger: GTGGAGAGCACTGGTAATGCCAAGGCGGAGGCTGAGTCCCGGGCAGAGGCAGCGAGGATTGAGGGAGAAGGCTCTGTGCTGCAGGCCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS GCA 90 bp | CTCTGGCCCGGCCACAGCCAAGTCCCTGATGGTTCCGGGGCCCAGTaGCTCTGTCATCTCCTTGAACTTCTTTGCCTCCACGTCGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWPGHSQVPDGSGAQ*LCHLLELLCLHVGE Trigger: CTCGCCGACGTGGAGGCAAAGAAGTTCAAGGAGATGACAGAGGCACTGGGCCCCGGAACCATCAGGGACTTGGCTGTGGCCGGGCCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS CCA 90 bp | TCGATGGCTAGCTGGACACTGCGCTGCAGGGCATCCCGGGTCCTCTaGTCCACAGGCTCCACTGACTGCACGTCCACACTGCTCACAACC | + |
|
Preference number: 5 (lower is better) Translates to: SMASWTLRCRASRVL*STGSTDCTSTLLTT Trigger: GGTTGTGAGCAGTGTGGACGTGCAGTCAGTGGAGCCTGTGGACCAGAGGACCCGGGATGCCCTGCAGCGCAGTGTCCAGCTAGCCATCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS GCA 90 bp | TCAGCCTCCGTCTCAATGGCTAACGCCTGCGCCTTTAGCTTGGCCTaGAGCACAGAGCCTTCTCCCTCAATCCTCGCTGCCTCTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SASVSMANACAFSLA*STEPSPSILAASAR Trigger: CCGGGCAGAGGCAGCGAGGATTGAGGGAGAAGGCTCTGTGCTGCAGGCCAAGCTAAAGGCGCAGGCGTTAGCCATTGAGACGGAGGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS-3UTR CAA 90 bp | CACAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGGCGAGCTGCTGTGCCTaGCTCACCTCCAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HRVAASEDLVKQAFLGAGASCCA*LTSSSS Trigger: GCTGGAGCTGGAGGTGAGCAAGGCACAGCAGCTCGC...CCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
||
| CDS GCA 90 bp | GACCACACGGGCTCTCTTGGCTCTGTAGTCGTACACCTGCACCGCTaGGTTGTGGGGGACACGGTAGCTGACCACTCGGGTCTTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DHTGSLGSVVVHLHR*VVGDTVADHSGLVP Trigger: AGGAACAAGACCCGAGTGGTCAGCTACCGTGTCCCCCACAACGCAGCGGTGCAGGTGTACGACTACAGAGCCAAGAGAGCCCGTGTGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 90 bp | TTGGCTGCTGCCTCCTGGGAGTTGGTTGTAATTTCGATGGCTAGCTaGACACTGCGCTGCAGGGCATCCCGGGTCCTCTGGTCCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LAAASWELVVISMAS*TLRCRASRVLWSTG Trigger: GCCTGTGGACCAGAGGACCCGGGATGCCCTGCAGCGCAGTGTCCAGCTAGCCATCGAAATTACAACCAACTCCCAGGAGGCAGCAGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 90 bp | CCAGCTCAGCCTCCGTCTCAATGGCTAACGCCTGCGCCTTTAGCTTaGCCTGCAGCACAGAGCCTTCTCCCTCAATCCTCGCTGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAQPPSQWLTPAPLA*PAAQSLLPQSSLPL Trigger: CAGAGGCAGCGAGGATTGAGGGAGAAGGCTCTGTGCTGCAGGCCAAGCTAAAGGCGCAGGCGTTAGCCATTGAGACGGAGGCTGAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS TCA 90 bp | TGTAGTCGTACACCTGCACCGCTGCGTTGTGGGGGACACGGTAGCTaGCCACTCGGGTCTTGTTCCTTGCAGCTGAGGGCTGAAGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: CSRTPAPLRCGGHGS*PLGSCSLQLRAEGP Trigger: AGGTCCTTCAGCCCTCAGCTGCAAGGAACAAGACCCGAGTGGTCAGCTACCGTGTCCCCCACAACGCAGCGGTGCAGGTGTACGACTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 90 bp | CTCGGGTCTTGTTCCTTGCAGCTGAGGGCTGAAGGACCTTGGCTGTaGCCTTCTGACCCCTGTCAGCCAGAGGGTCATGCCCCAAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGSCSLQLRAEGPWL*PSDPCQPEGHAPSS Trigger: TGAACTTGGGGCATGACCCTCTGGCTGACAGGGGTCAGAAGGGCACAGCCAAGGTCCTTCAGCCCTCAGCTGCAAGGAACAAGACCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 90 bp | GGTGATGACGTCAGTGAAGAAATCAGGTCCCAGCAGCAGGCAGAGTaGACGACGGGCATGAGGACGCTTGGGTCGCCCAGCAGAAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GDDVSEEIRSQQQAE*TTGMRTLGSPSRKG Trigger: TCCCTTTCTGCTGGGCGACCCAAGCGTCCTCATGCCCGTCGTGCACTCTGCCTGCTGCTGGGACCTGATTTCTTCACTGACGTCATCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 90 bp | TCGCTGCCTCTGCCCGGGACTCAGCCTCCGCCTTGGCATTACCAGTaGTCTCCACAGCCATGCTCATCGCCTCAAGCTCCAAAAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLPLPGTQPPPWHYQ*SPQPCSSPQAPKVP Trigger: AGGAACTTTTGGAGCTTGAGGCGATGAGCATGGCTGTGGAGAGCACTGGTAATGCCAAGGCGGAGGCTGAGTCCCGGGCAGAGGCAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | CACAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGGACTCAGCCTCCGCCTaGGCATTACCAGTGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRVAASEDLVKQAFLGAGDSASA*ALPVLS Trigger: GGAGAGCACTGGTAATGCCAAGGCGGAGGCTGAGTC...CCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS TCA 90 bp | GGGCATGAGGACGCTTGGGTCGCCCAGCAGAAAGGGACAACACTGTaGACTGCTCCTCGGGATCCAGTGACACTAGCTCAGGCCCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GHEDAWVAQQKGTTL*TAPRDPVTLAQAQR Trigger: TCTTTGGGCCTGAGCTAGTGTCACTGGATCCCGAGGAGCAGTTCACAGTGTTGTCCCTTTCTGCTGGGCGACCCAAGCGTCCTCATGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | AGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGAAGCCGAAGGCTGTGTaGAAGAGGTTGATGGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RVAASEDLVKQAFLGAGPKPKAV*KRLMGD Trigger: GTCCCCCATCAACCTCTTCAACACAGCCTTCGGCTT...CGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS TCA 90 bp | ATCTTCTGCCTCTCAAGCCGACCACGGGCTTCCTGCTCCAGTCTCTaGGCCTCGTGCTTGGCTGCTGCCTCCTGGGAGTTGGTTGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: IFCLSSRPRASCSSL*ASCLAAASWELVVI Trigger: AATTACAACCAACTCCCAGGAGGCAGCAGCCAAGCACGAGGCTCAGAGACTGGAGCAGGAAGCCCGTGGTCGGCTTGAGAGGCAGAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 90 bp | TTCTTCACTCGCTCCAGCTCAGCCTCCGTCTCAATGGCTAACGCCTaGGCCTTTAGCTTGGCCTGCAGCACAGAGCCTTCTCCCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: FFTRSSSASVSMANA*AFSLACSTEPSPSI Trigger: GATTGAGGGAGAAGGCTCTGTGCTGCAGGCCAAGCTAAAGGCGCAGGCGTTAGCCATTGAGACGGAGGCTGAGCTGGAGCGAGTGAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 90 bp | TCTCTCGCACTTTCTTCACTCGCTCCAGCTCAGCCTCCGTCTCAATaGCTAACGCCTGCGCCTTTAGCTTGGCCTGCAGCACAGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLALSSLAPAQPPSQ*LTPAPLAWPAAQSL Trigger: AAGGCTCTGTGCTGCAGGCCAAGCTAAAGGCGCAGGCGTTAGCCATTGAGACGGAGGCTGAGCTGGAGCGAGTGAAGAAAGTGCGAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | AGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCTTGACAACACGCTTTaGTCCCAGCTGGTTCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RVAASEDLVKQAFLGAGPLDNTL*SQLVLA Trigger: GGCAAGAACCAGCTGGGACAAAAGCGTGTTGTCAAG...CGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | CACAGAGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGGCTGTGTTGAAGAGGTaGATGGGGGACGAGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: HRVAASEDLVKQAFLGAGAVLKR*MGDEPS Trigger: AGATGGCTCGTCCCCCATCAACCTCTTCAACACAGC...CCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACTCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | AGTGGCTGCTTCAGAGGACCTGGTAAAGCAAGCCTTCCTTGGGGCTGGGCCGCCAGCTCCAAAAGTTCCTaGCGGGCTTTTTCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGCFRGPGKASLPWGWAASSKSS*RAFSAS Trigger: AGAAGCTGAAAAAGCCCGCAAGGAACTTTTGGAGCT...GGCGGCCCAGCCCCAAGGAAGGCTTGCTTTACCAGGTCCTCTGAAGCAGCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 90 bp | GCCTCAAGCTCCAAAAGTTCCTTGCGGGCTTTTTCAGCTTCTGACTaGTCCAAGATCTTCTGCCTCTCAAGCCGACCACGGGCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASSSKSSLRAFSASD*SKIFCLSSRPRASC Trigger: GCAGGAAGCCCGTGGTCGGCTTGAGAGGCAGAAGATCTTGGACCAGTCAGAAGCTGAAAAAGCCCGCAAGGAACTTTTGGAGCTTGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 90 bp | TCCTGCCATGACCTTGTCTCCATTCTTATCTTCAAAGTCCAGCAATaGCTTCAGATGCAGGGCAGTGTTGGGCAGAACCACCTGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SCHDLVSILIFKVQQ*LQMQGSVGQNHLQR Trigger: CCGCTGCAGGTGGTTCTGCCCAACACTGCCCTGCATCTGAAGGCATTGCTGGACTTTGAAGATAAGAATGGAGACAAGGTCATGGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 90 bp | GACAACACGCTTTTGTCCCAGCTGGTTCTTGCCATCTGGTCCCATTaGGTCAAGGATAACACAGTAGTGTCGAGGTCCCAGGGTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DNTLLSQLVLAIWSH*VKDNTVVSRSQGGD Trigger: ATCACCACCCTGGGACCTCGACACTACTGTGTTATCCTTGACCCAATGGGACCAGATGGCAAGAACCAGCTGGGACAAAAGCGTGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 90 bp | CTCTCCCTTGACAACACGCTTTTGTCCCAGCTGGTTCTTGCCATCTaGTCCCATTGGGTCAAGGATAACACAGTAGTGTCGAGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSLDNTLLSQLVLAI*SHWVKDNTVVSRSQ Trigger: CTGGGACCTCGACACTACTGTGTTATCCTTGACCCAATGGGACCAGATGGCAAGAACCAGCTGGGACAAAAGCGTGTTGTCAAGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 90 bp | AGCACGTACACATCCTGGATGCCTCGTTCCAGCCTTTCTCCTGGCTaGAGGAAAAAGGACTTCTCTCCCTTGACAACACGCTTTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: STYTSWMPRSSLSPG*RKKDFSPLTTRFCP Trigger: GGGACAAAAGCGTGTTGTCAAGGGAGAGAAGTCCTTTTTCCTCCAGCCAGGAGAAAGGCTGGAACGAGGCATCCAGGATGTGTACGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 90 bp | CTGTGGGATGTAGGTGCCAGGTCCCTCAAACAGCCACTCGTCTCCTaGCATGACCTTGTCTCCATTCTTATCTTCAAAGTCCAGCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LWDVGARSLKQPLVS*HDLVSILIFKVQQC Trigger: GCATTGCTGGACTTTGAAGATAAGAATGGAGACAAGGTCATGGCAGGAGACGAGTGGCTGTTTGAGGGACCTGGCACCTACATCCCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 90 bp | AAAGTGCCAGTTGTAAGCCAGCTGCAGCTGCAGCCTGGCATGATCTaGAGTTTCGATGGTGATGACGTCAGTGAAGAAATCAGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KVPVVSQLQLQPGMI*SFDGDDVSEEIRSQ Trigger: CTGGGACCTGATTTCTTCACTGACGTCATCACCATCGAAACTGCAGATCATGCCAGGCTGCAGCTGCAGCTGGCTTACAACTGGCACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGCGGTCAAAGCATTCCTaGCGGGCCCTGAGCCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVRSKHS*RALSRR Trigger: TCTGCGGCTCAGGGCCCGCAAGGAATGCTTTGACCG...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGGCCTGCGCCTTTAGCTaGGCCTGCAGCACAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVACAFS*ACSTEP Trigger: AGGCTCTGTGCTGCAGGCCAAGCTAAAGGCGCAGGC...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS TCA 90 bp | TTCGGACATCTCAAAGCCAAAAACAGCCATGCGAATGATACGTGCTaGGTTCTTATGGAAGTCATCAAATGTGACCGAGGCTACAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FGHLKAKNSHANDTC*VLMEVIKCDRGYSP Trigger: GGGGCTGTAGCCTCGGTCACATTTGATGACTTCCATAAGAACTCAGCACGTATCATTCGCATGGCTGTTTTTGGCTTTGAGATGTCCGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | TCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTGAGATGCAGGGCAGTGTaGGGCAGAACCACCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFYLSIVSVVSVYLRHRVRCRAV*GRTTCS Trigger: GCTGCAGGTGGTTCTGCCCAACACTGCCCTGCATCT...CACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | CAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACGCCGGATGTAGGTCTTaGGTCCAACCTCTACACGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLSFYLSIVSVVSVYLRHAGCRS*VQPLHG Trigger: CCCGTGTAGAGGTTGGACCAAAGACCTACATCCGGC...GTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | GTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGCTCGGGTCTTGTTCCTaGCAGCTGAGGGCTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVILFIHCQCSQCLPKAQLGSCS*QLRAEG Trigger: TCCTTCAGCCCTCAGCTGCAAGGAACAAGACCCGAG...CTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | ACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCAAAGGTCCTTGAAGTTTaGCCGAGCCCGGAGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TVVILFIHCQCSQCLPKAKVLEV*PSPEVQ Trigger: CTGCACCTCCGGGCTCGGCAAAACTTCAAGGACCTT...TGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | CAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACTCCACCACCTCCACTTaGGCAGATGGCACATACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QLSFYLSIVSVVSVYLRHSTTST*ADGTYS Trigger: GGAGTATGTGCCATCTGCCAAAGTGGAGGTGGTGGA...GTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | GTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTCCTGAGCCGCAGAGCTaGGTTCTGTTTGATGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VILFIHCQCSQCLPKAQSPEPQS*VLFDDC Trigger: ACAGTCATCAAACAGAACCAAGCTCTGCGGCTCAGG...ACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | GTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGGCCTCTGTCATCTCCTaGAACTTCTTTGCCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: VVILFIHCQCSQCLPKAQASVIS*NFFAST Trigger: CGTGGAGGCAAAGAAGTTCAAGGAGATGACAGAGGC...CTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | GTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGCACAGAGTTCTCCTGCCATGACCTaGTCTCCATTCTTATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VILFIHCQCSQCLPKAQSSPAMT*SPFLSS Trigger: TGAAGATAAGAATGGAGACAAGGTCATGGCAGGAGA...ACTCTGTGCCTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS-3UTR CAA 90 bp | TCTACAGTTGTCATTTTATTTATCCATTGTCAGTGTAGTCAGTGTCTACCTAAGGGCACAGAGAAAAGCTaGGCTGTCTCTTCAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: STVVILFIHCQCSQCLPKGTEKS*AVSSGS Trigger: TGATCCTGAAGAGACAGCCAAGCTTTTCTCTGTGCC...CTTAGGTAGACACTGACTACACTGACAATGGATAAATAAAATGACAACTGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | GGCCTGCAGCACAGAGCCTTCTCCCTCAATCCTCGCTaGCTCTGCCCGGGACTCAGCCTCCGCCTTGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: GLQHRAFSLNPR*LCPGLSLRLGI Trigger: AATGCCAAGGCGGAGGCTGAGTCCCGGGCAGAGGCAGCGAGGATTGAGGGAGAAGGCTCTGTGCTGCAGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | AGCTGGACACTGCGCTGCAGGGCATCCCGGGTCCTCTaGTCCACAGGCTCCACTGACTGCACGTCCACACTG | + |
|
Preference number: 6 (lower is better) Translates to: SWTLRCRASRVL*STGSTDCTSTL Trigger: CAGTGTGGACGTGCAGTCAGTGGAGCCTGTGGACCAGAGGACCCGGGATGCCCTGCAGCGCAGTGTCCAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 90 bp | GCACCGACGGATCGGACCAGCCACTCCTCACCTGTCACCCGTTCCTaGCCATCCCGGTCAAAGCATTCCTTGCGGGCCCTGAGCCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: APTDRTSHSSPVTRS*PSRSKHSLRALSRR Trigger: TCTGCGGCTCAGGGCCCGCAAGGAATGCTTTGACCGGGATGGCAAGGAACGGGTGACAGGTGAGGAGTGGCTGGTCCGATCCGTCGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS TCA 72 bp | CTTTGGCAGATGGCACATACTCCAGGGGCCCTCGGATaGGCCAGCGGTCTCCAGCCTGGTGGGCGACCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LWQMAHTPGALG*ASGLQPGGRPS Trigger: AGAAGGTCGCCCACCAGGCTGGAGACCGCTGGCTCATCCGAGGGCCCCTGGAGTATGTGCCATCTGCCAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS TCA 72 bp | TCACCTGCATCTCTGGCCCGGCCACAGCCAAGTCCCTaGTGGTTCCGGGGCCCAGTGCCTCTGTCATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPASLARPQPSP*WFRGPVPLSSP Trigger: AGGAGATGACAGAGGCACTGGGCCCCGGAACCATCAGGGACTTGGCTGTGGCCGGGCCAGAGATGCAGGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | TCCAGGGGCTGCAGCGCCTTCAGCAGGAGCCCCTGCTaGTCTGACAGCACGTACACATCCTGGATGCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SRGCSAFSRSPC*SDSTYTSWMPR Trigger: ACGAGGCATCCAGGATGTGTACGTGCTGTCAGAGCAGCAGGGGCTCCTGCTGAAGGCGCTGCAGCCCCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | GACTGCACGTCCACACTGCTCACAACCAGCCCATTTTaGGGAAAGACGGCCCGGTCTCGAGCCCTGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DCTSTLLTTSPF*GKTARSRALGR Trigger: CCTGCCCAGGGCTCGAGACCGGGCCGTCTTTCCCCAAAATGGGCTGGTTGTGAGCAGTGTGGACGTGCAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS TCA 72 bp | ACACCTGCACCGCTGCGTTGTGGGGGACACGGTAGCTaGCCACTCGGGTCTTGTTCCTTGCAGCTGAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TPAPLRCGGHGS*PLGSCSLQLRA Trigger: AGCCCTCAGCTGCAAGGAACAAGACCCGAGTGGTCAGCTACCGTGTCCCCCACAACGCAGCGGTGCAGGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS TCA 72 bp | CAGGGCATCCCGGGTCCTCTGGTCCACAGGCTCCACTaGCTGCACGTCCACACTGCTCACAACCAGCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: QGIPGPLVHRLH*LHVHTAHNQPI Trigger: AATGGGCTGGTTGTGAGCAGTGTGGACGTGCAGTCAGTGGAGCCTGTGGACCAGAGGACCCGGGATGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | GGCTCTCTTGGCTCTGTAGTCGTACACCTGCACCGCTaGGTTGTGGGGGACACGGTAGCTGACCACTCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSLGSVVVHLHR*VVGDTVADHSG Trigger: ACCCGAGTGGTCAGCTACCGTGTCCCCCACAACGCAGCGGTGCAGGTGTACGACTACAGAGCCAAGAGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | GTCAGTGAAGAAATCAGGTCCCAGCAGCAGGCAGAGTaGACGACGGGCATGAGGACGCTTGGGTCGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VSEEIRSQQQAE*TTGMRTLGSPS Trigger: GCTGGGCGACCCAAGCGTCCTCATGCCCGTCGTGCACTCTGCCTGCTGCTGGGACCTGATTTCTTCACTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | CTGCCCGGGACTCAGCCTCCGCCTTGGCATTACCAGTaGTCTCCACAGCCATGCTCATCGCCTCAAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPGTQPPPWHYQ*SPQPCSSPQAP Trigger: TGGAGCTTGAGGCGATGAGCATGGCTGTGGAGAGCACTGGTAATGCCAAGGCGGAGGCTGAGTCCCGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 72 bp | GATCGGACCAGCCACTCCTCACCTGTCACCCGTTCCTaGCCATCCCGGTCAAAGCATTCCTTGCGGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DRTSHSSPVTRS*PSRSKHSLRAL Trigger: CAGGGCCCGCAAGGAATGCTTTGACCGGGATGGCAAGGAACGGGTGACAGGTGAGGAGTGGCTGGTCCGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 72 bp | AGTGCGGTGGGCCACTCCCCGAAGGTCCTTGAAGTTTaGCCGAGCCCGGAGGTGCAGGGCCGTCTTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SAVGHSPKVLEV*PSPEVQGRLFC Trigger: ACAGAAAAGACGGCCCTGCACCTCCGGGCTCGGCAAAACTTCAAGGACCTTCGGGGAGTGGCCCACCGCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 90 bp | GCCAAGTCCCTGATGGTTCCGGGGCCCAGTGCCTCTGTCATCTCCTaGAACTTCTTTGCCTCCACGTCGGCGAGCTGCTGTGCCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: AKSLMVPGPSASVIS*NFFASTSASCCALL Trigger: GAGCAAGGCACAGCAGCTCGCCGACGTGGAGGCAAAGAAGTTCAAGGAGATGACAGAGGCACTGGGCCCCGGAACCATCAGGGACTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | TGTTCCTTGCAGCTGAGGGCTGAAGGACCTTGGCTGTaGCCTTCTGACCCCTGTCAGCCAGAGGGTCATGCC | + |
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Preference number: 6 (lower is better) Translates to: CSLQLRAEGPWL*PSDPCQPEGHA Trigger: GGCATGACCCTCTGGCTGACAGGGGTCAGAAGGGCACAGCCAAGGTCCTTCAGCCCTCAGCTGCAAGGAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | GCATCCCGGGTCCTCTGGTCCACAGGCTCCACTGACTaGACGTCCACACTGCTCACAACCAGCCCATTTTGG | + |
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Preference number: 6 (lower is better) Translates to: ASRVLWSTGSTD*TSTLLTTSPFW Trigger: CCAAAATGGGCTGGTTGTGAGCAGTGTGGACGTGCAGTCAGTGGAGCCTGTGGACCAGAGGACCCGGGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | CGCTCCAGCTCAGCCTCCGTCTCAATGGCTAACGCCTaGGCCTTTAGCTTGGCCTGCAGCACAGAGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RSSSASVSMANA*AFSLACSTEPS Trigger: AGAAGGCTCTGTGCTGCAGGCCAAGCTAAAGGCGCAGGCGTTAGCCATTGAGACGGAGGCTGAGCTGGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | ATCTCCTTGAACTTCTTTGCCTCCACGTCGGCGAGCTaGTGTGCCTTGCTCACCTCCAGCTCCAGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ISLNFFASTSAS*CALLTSSSSWA Trigger: GGCCCAGCTGGAGCTGGAGGTGAGCAAGGCACAGCAGCTCGCCGACGTGGAGGCAAAGAAGTTCAAGGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | GGGTCTTGTTCCTTGCAGCTGAGGGCTGAAGGACCTTaGCTGTGCCCTTCTGACCCCTGTCAGCCAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GSCSLQLRAEGP*LCPSDPCQPEG Trigger: ACCCTCTGGCTGACAGGGGTCAGAAGGGCACAGCCAAGGTCCTTCAGCCCTCAGCTGCAAGGAACAAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | GCCTCCTGGGAGTTGGTTGTAATTTCGATGGCTAGCTaGACACTGCGCTGCAGGGCATCCCGGGTCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ASWELVVISMAS*TLRCRASRVLW Trigger: CCAGAGGACCCGGGATGCCCTGCAGCGCAGTGTCCAGCTAGCCATCGAAATTACAACCAACTCCCAGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 90 bp | TCCAGCTCAGCCTCCGTCTCAATGGCTAACGCCTGCGCCTTTAGCTaGGCCTGCAGCACAGAGCCTTCTCCCTCAATCCTCGCTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSSASVSMANACAFS*ACSTEPSPSILAAS Trigger: AGAGGCAGCGAGGATTGAGGGAGAAGGCTCTGTGCTGCAGGCCAAGCTAAAGGCGCAGGCGTTAGCCATTGAGACGGAGGCTGAGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | TCTGGTCCACAGGCTCCACTGACTGCACGTCCACACTaGTCACAACCAGCCCATTTTGGGGAAAGACGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SGPQAPLTARPH*SQPAHFGERRP Trigger: GGGCCGTCTTTCCCCAAAATGGGCTGGTTGTGAGCAGTGTGGACGTGCAGTCAGTGGAGCCTGTGGACCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | GTCTCAATGGCTAACGCCTGCGCCTTTAGCTTGGCCTaGAGCACAGAGCCTTCTCCCTCAATCCTCGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VSMANACAFSLA*STEPSPSILAA Trigger: GGCAGCGAGGATTGAGGGAGAAGGCTCTGTGCTGCAGGCCAAGCTAAAGGCGCAGGCGTTAGCCATTGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | CCTCCGTCTCAATGGCTAACGCCTGCGCCTTTAGCTTaGCCTGCAGCACAGAGCCTTCTCCCTCAATCCTCG | + |
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Preference number: 6 (lower is better) Translates to: PPSQWLTPAPLA*PAAQSLLPQSS Trigger: CGAGGATTGAGGGAGAAGGCTCTGTGCTGCAGGCCAAGCTAAAGGCGCAGGCGTTAGCCATTGAGACGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 72 bp | GTCACCCGTTCCTTGCCATCCCGGTCAAAGCATTCCTaGCGGGCCCTGAGCCGCAGAGCTTGGTTCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: VTRSLPSRSKHS*RALSRRAWFCL Trigger: CAAACAGAACCAAGCTCTGCGGCTCAGGGCCCGCAAGGAATGCTTTGACCGGGATGGCAAGGAACGGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 72 bp | GCCTCCGTCTCAATGGCTAACGCCTGCGCCTTTAGCTaGGCCTGCAGCACAGAGCCTTCTCCCTCAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: ASVSMANACAFS*ACSTEPSPSIL Trigger: GAGGATTGAGGGAGAAGGCTCTGTGCTGCAGGCCAAGCTAAAGGCGCAGGCGTTAGCCATTGAGACGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 90 bp | TCCTCACCTGTCACCCGTTCCTTGCCATCCCGGTCAAAGCATTCCTaGCGGGCCCTGAGCCGCAGAGCTTGGTTCTGTTTGATGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSPVTRSLPSRSKHS*RALSRRAWFCLMTV Trigger: CACAGTCATCAAACAGAACCAAGCTCTGCGGCTCAGGGCCCGCAAGGAATGCTTTGACCGGGATGGCAAGGAACGGGTGACAGGTGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS TCA 72 bp | GACGCTTGGGTCGCCCAGCAGAAAGGGACAACACTGTaGACTGCTCCTCGGGATCCAGTGACACTAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: DAWVAQQKGTTL*TAPRDPVTLAQ Trigger: CTGAGCTAGTGTCACTGGATCCCGAGGAGCAGTTCACAGTGTTGTCCCTTTCTGCTGGGCGACCCAAGCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | GCCCCTGCTGCTCTGACAGCACGTACACATCCTGGATaGCTCGTTCCAGCCTTTCTCCTGGCTGGAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: APAALTARTHPG*LVPAFLLAGGK Trigger: TTTTCCTCCAGCCAGGAGAAAGGCTGGAACGAGGCATCCAGGATGTGTACGTGCTGTCAGAGCAGCAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | TTGGGTCGCCCAGCAGAAAGGGACAACACTGTGAACTaGTCCTCGGGATCCAGTGACACTAGCTCAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LGRPAERDNTVN*SSGSSDTSSGP Trigger: TGGGCCTGAGCTAGTGTCACTGGATCCCGAGGAGCAGTTCACAGTGTTGTCCCTTTCTGCTGGGCGACCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | ACACTAGCTCAGGCCCAAAGACCACACGGGCTCTCTTaGCTCTGTAGTCGTACACCTGCACCGCTGCGTTGT | + |
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Preference number: 6 (lower is better) Translates to: TLAQAQRPHGLS*LCSRTPAPLRC Trigger: ACAACGCAGCGGTGCAGGTGTACGACTACAGAGCCAAGAGAGCCCGTGTGGTCTTTGGGCCTGAGCTAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | CTTTCTTCACTCGCTCCAGCTCAGCCTCCGTCTCAATaGCTAACGCCTGCGCCTTTAGCTTGGCCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSSLAPAQPPSQ*LTPAPLAWPAA Trigger: TGCTGCAGGCCAAGCTAAAGGCGCAGGCGTTAGCCATTGAGACGGAGGCTGAGCTGGAGCGAGTGAAGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 72 bp | CCCAGCCCCAGCAAGCCGAAGGCTGTGTTGAAGAGGTaGATGGGGGACGAGCCATCTGTGATGAGAGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PSPSKPKAVLKR*MGDEPSVMRVD Trigger: ATCCACTCTCATCACAGATGGCTCGTCCCCCATCAACCTCTTCAACACAGCCTTCGGCTTGCTGGGGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | CGGGCTTTTTCAGCTTCTGACTGGTCCAAGATCTTCTaGCTCTCAAGCCGACCACGGGCTTCCTGCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: RAFSASDWSKIF*LSSRPRASCSS Trigger: ACTGGAGCAGGAAGCCCGTGGTCGGCTTGAGAGGCAGAAGATCTTGGACCAGTCAGAAGCTGAAAAAGCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | GGCCTGAATGATCTCCACGACTTCCACCTCCTTCTGTaGGATGTAGGTGCCAGGTCCCTCAAACAGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: GLNDLHDFHLLL*DVGARSLKQPL Trigger: GAGTGGCTGTTTGAGGGACCTGGCACCTACATCCCACAGAAGGAGGTGGAAGTCGTGGAGATCATTCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 72 bp | TCAAAGTCCAGCAATGCCTTCAGATGCAGGGCAGTGTaGGGCAGAACCACCTGCAGCGGGGTGATGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SKSSNAFRCRAV*GRTTCSGVMSF Trigger: AAAGGACATCACCCCGCTGCAGGTGGTTCTGCCCAACACTGCCCTGCATCTGAAGGCATTGCTGGACTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 90 bp | CCGCACCTTTCCCGTCTTGACATCCTGAACATAGATGCCCTCATTTaGGTCCAGAGGGATAGCCTGACGCTCTTCCACCACCTCCACTTT | + |
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Preference number: 6 (lower is better) Translates to: PHLSRLDILNIDALI*VQRDSLTLFHHLHF Trigger: AAAGTGGAGGTGGTGGAAGAGCGTCAGGCTATCCCTCTGGACCAAAATGAGGGCATCTATGTTCAGGATGTCAAGACGGGAAAGGTGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 90 bp | GTGCTCTCCACAGCCATGCTCATCGCCTCAAGCTCCAAAAGTTCCTaGCGGGCTTTTTCAGCTTCTGACTGGTCCAAGATCTTCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: VLSTAMLIASSSKSS*RAFSASDWSKIFCL Trigger: GAGGCAGAAGATCTTGGACCAGTCAGAAGCTGAAAAAGCCCGCAAGGAACTTTTGGAGCTTGAGGCGATGAGCATGGCTGTGGAGAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | CTTTTGTCCCAGCTGGTTCTTGCCATCTGGTCCCATTaGGTCAAGGATAACACAGTAGTGTCGAGGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLSQLVLAIWSH*VKDNTVVSRSQ Trigger: CTGGGACCTCGACACTACTGTGTTATCCTTGACCCAATGGGACCAGATGGCAAGAACCAGCTGGGACAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | GTACACATCCTGGATGCCTCGTTCCAGCCTTTCTCCTaGCTGGAGGAAAAAGGACTTCTCTCCCTTGACAAC | + |
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Preference number: 6 (lower is better) Translates to: VHILDASFQPFS*LEEKGLLSLDN Trigger: GTTGTCAAGGGAGAGAAGTCCTTTTTCCTCCAGCCAGGAGAAAGGCTGGAACGAGGCATCCAGGATGTGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | TCCAAAAGTTCCTTGCGGGCTTTTTCAGCTTCTGACTaGTCCAAGATCTTCTGCCTCTCAAGCCGACCACGG | + |
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Preference number: 6 (lower is better) Translates to: SKSSLRAFSASD*SKIFCLSSRPR Trigger: CCGTGGTCGGCTTGAGAGGCAGAAGATCTTGGACCAGTCAGAAGCTGAAAAAGCCCGCAAGGAACTTTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 72 bp | TCCCGTCTTGACATCCTGAACATAGATGCCCTCATTTaGGTCCAGAGGGATAGCCTGACGCTCTTCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: SRLDILNIDALI*VQRDSLTLFHH Trigger: GTGGTGGAAGAGCGTCAGGCTATCCCTCTGGACCAAAATGAGGGCATCTATGTTCAGGATGTCAAGACGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 72 bp | CAGGCGTCGCCCACAAAGTCAGGCACAGAGAAAAGCTaGGCTGTCTCTTCAGGATCATTCCGGTTCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: QASPTKSGTEKS*AVSSGSFRFFS Trigger: ACTGAAGAACCGGAATGATCCTGAAGAGACAGCCAAGCTTTTCTCTGTGCCTGACTTTGTGGGCGACGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 90 bp | ATGGCCTTGCAGGCGTCGCCCACAAAGTCAGGCACAGAGAAAAGCTaGGCTGTCTCTTCAGGATCATTCCGGTTCTTCAGTTCAAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: MALQASPTKSGTEKS*AVSSGSFRFFSSKC Trigger: GCACTTTGAACTGAAGAACCGGAATGATCCTGAAGAGACAGCCAAGCTTTTCTCTGTGCCTGACTTTGTGGGCGACGCCTGCAAGGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS GCA 72 bp | GTAGGTGCCAGGTCCCTCAAACAGCCACTCGTCTCCTaGCATGACCTTGTCTCCATTCTTATCTTCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VGARSLKQPLVS*HDLVSILIFKV Trigger: GACTTTGAAGATAAGAATGGAGACAAGGTCATGGCAGGAGACGAGTGGCTGTTTGAGGGACCTGGCACCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | GACAACACGCTTTTGTCCCAGCTGGTTCTTGCCATCTaGTCCCATTGGGTCAAGGATAACACAGTAGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: DNTLLSQLVLAI*SHWVKDNTVVS Trigger: CGACACTACTGTGTTATCCTTGACCCAATGGGACCAGATGGCAAGAACCAGCTGGGACAAAAGCGTGTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 72 bp | TCTCCCTTGACAACACGCTTTTGTCCCAGCTGGTTCTaGCCATCTGGTCCCATTGGGTCAAGGATAACACAG | + |
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Preference number: 6 (lower is better) Translates to: SPLTTRFCPSWF*PSGPIGSRITQ Trigger: CTGTGTTATCCTTGACCCAATGGGACCAGATGGCAAGAACCAGCTGGGACAAAAGCGTGTTGTCAAGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CAA 72 bp | ACAGCCATGCTCATCGCCTCAAGCTCCAAAAGTTCCTaGCGGGCTTTTTCAGCTTCTGACTGGTCCAAGATC | + |
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Preference number: 6 (lower is better) Translates to: TAMLIASSSKSS*RAFSASDWSKI Trigger: GATCTTGGACCAGTCAGAAGCTGAAAAAGCCCGCAAGGAACTTTTGGAGCTTGAGGCGATGAGCATGGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS CCA 72 bp | AAAACAGCCATGCGAATGATACGTGCTGAGTTCTTATaGAAGTCATCAAATGTGACCGAGGCTACAGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: KTAMRMIRAEFL*KSSNVTEATAP Trigger: GGGGGCTGTAGCCTCGGTCACATTTGATGACTTCCATAAGAACTCAGCACGTATCATTCGCATGGCTGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS TCA 72 bp | CTCAAAGCCAAAAACAGCCATGCGAATGATACGTGCTaGGTTCTTATGGAAGTCATCAAATGTGACCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LKAKNSHANDTC*VLMEVIKCDRG Trigger: GCCTCGGTCACATTTGATGACTTCCATAAGAACTCAGCACGTATCATTCGCATGGCTGTTTTTGGCTTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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| CDS TCA 72 bp | CTTCGGACATCTCAAAGCCAAAAACAGCCATGCGAATaGTACGTGCTGAGTTCTTATGGAAGTCATCAAATG | + |
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Preference number: 6 (lower is better) Translates to: LRTSQSQKQPCE*YVLSSYGSHQM Trigger: CATTTGATGACTTCCATAAGAACTCAGCACGTATCATTCGCATGGCTGTTTTTGGCTTTGAGATGTCCGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165096.9 |
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