Pregenerated sensors for MVD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006517Ensembl transcript IDs: ENSMUST00000006692.6, ENSMUST00000211883.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCTCCGCTTCCGAGCCAGGCGGCGAATCTCTCTCAGGCAGGCCTaGAGCCGTGGCTGCCCCACGTCCTCCTCGCGACCATTCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: LLRFRARRRISLRQA*SRGCPTSSSRPFSQ Trigger: CTGGCTGAATGGTCGCGAGGAGGACGTGGGGCAGCCACGGCTCCAGGCCTGCCTGAGAGAGATTCGCCGCCTGGCTCGGAAGCGGAGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 90 bp | CGAGCCAGGCGGCGAATCTCTCTCAGGCAGGCCTGGAGCCGTGGCTaGCCCACGTCCTCCTCGCGACCATTCAGCCAGATGCGGTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: RARRRISLRQAWSRG*PTSSSRPFSQMRSS Trigger: AGAGGACCGCATCTGGCTGAATGGTCGCGAGGAGGACGTGGGGCAGCCACGGCTCCAGGCCTGCCTGAGAGAGATTCGCCGCCTGGCTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 90 bp | CCATCTGCCACTCCACAAAGCCCCCATAGAGACTGCGGCACGCACTaGCTGAGCCCCGCCGAGCCACTTCGGAGAGGTCTCCCTCAACCC | + |
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Preference number: 1 (lower is better) Translates to: PSATPQSPHRDCGTH*LSPAEPLRRGLPQP Trigger: GGGTTGAGGGAGACCTCTCCGAAGTGGCTCGGCGGGGCTCAGGCAGTGCGTGCCGCAGTCTCTATGGGGGCTTTGTGGAGTGGCAGATGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 90 bp | TTGTCGGCGCTCACCACAAGGATAAGGATTCGGAGCTGGGGCCAGTaGCACTCTGGGGCTATCTGCCGGGCGATGCTGTCCTTCCCATCG | + |
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Preference number: 1 (lower is better) Translates to: LSALTTRIRIRSWGQ*HSGAICRAMLSFPS Trigger: CGATGGGAAGGACAGCATCGCCCGGCAGATAGCCCCAGAGTGGCACTGGCCCCAGCTCCGAATCCTTATCCTTGTGGTGAGCGCCGACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CCA 90 bp | GCTCACCACAAGGATAAGGATTCGGAGCTGGGGCCAGTGCCACTCTaGGGCTATCTGCCGGGCGATGCTGTCCTTCCCATCGGCCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: AHHKDKDSELGPVPL*GYLPGDAVLPIGLF Trigger: GAACAGGCCGATGGGAAGGACAGCATCGCCCGGCAGATAGCCCCAGAGTGGCACTGGCCCCAGCTCCGAATCCTTATCCTTGTGGTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CCA 90 bp | GTCTGCTTCTTGTCGGCGCTCACCACAAGGATAAGGATTCGGAGCTaGGGCCAGTGCCACTCTGGGGCTATCTGCCGGGCGATGCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: VCFLSALTTRIRIRS*GQCHSGAICRAMLS Trigger: GGACAGCATCGCCCGGCAGATAGCCCCAGAGTGGCACTGGCCCCAGCTCCGAATCCTTATCCTTGTGGTGAGCGCCGACAAGAAGCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 90 bp | GGGGGAGGCACCGACTCCCCATCCCTGATGAGCAGCTGTCTGGAGTaGTGGAAGGTCCATCGAGTGGGTCAGCTAGCCCTTCAGAAACCA | + |
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Preference number: 1 (lower is better) Translates to: GGGTDSPSLMSSCLE*WKVHRVGQLALQKP Trigger: TGGTTTCTGAAGGGCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCATCAGGGATGGGGAGTCGGTGCCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| 3UTR CCA 90 bp | GGAGGCACCGACTCCCCATCCCTGATGAGCAGCTGTCTGGAGTGCTaGAAGGTCCATCGAGTGGGTCAGCTAGCCCTTCAGAAACCAGCG | + |
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Preference number: 1 (lower is better) Translates to: GGTDSPSLMSSCLEC*KVHRVGQLALQKPA Trigger: CGCTGGTTTCTGAAGGGCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCATCAGGGATGGGGAGTCGGTGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| 3UTR CCA 90 bp | GCCCTTCAGGAGAGGCTGACCAGCAGGCCAGCTCCCGAGTTCCAGTaGGCAACCCCTTTCTCCAAATGGCACTGGACGTGGAAGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: ALQERLTSRPAPEFQ*ATPFSKWHWTWKRS Trigger: TGACCTCTTCCACGTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGCTGGCCTGCTGGTCAGCCTCTCCTGAAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 90 bp | GTGCTGGTCTCCACGCTGGTCTGCATGCCCACTGTACTGCCCGTCTaGTTCTTGTCGGCGCTCACCACAAGGATAAGGATTCGGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: VLVSTLVCMPTVLPV*FLSALTTRIRIRSW Trigger: CCAGCTCCGAATCCTTATCCTTGTGGTGAGCGCCGACAAGAAGCAGACGGGCAGTACAGTGGGCATGCAGACCAGCGTGGAGACCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CCA 90 bp | GCGTTGGGGCCAGCATCAAATGTGTATGCCACCTTCGTCTGCCCCTaGTGGGTGTTGAAGCGGTGGACTAGCTGGATGATGCGCCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: ALGPASNVYATFVCP*WVLKRWTSWMMRLE Trigger: CTCCAGGCGCATCATCCAGCTAGTCCACCGCTTCAACACCCACCAGGGGCAGACGAAGGTGGCATACACATTTGATGCTGGCCCCAACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CCA 90 bp | AGCAGGCCAGCTCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAATaGCACTGGACGTGGAAGAGGTCAAAGGTCCCGTTGTGGCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: SRPAPEFQWATPFSK*HWTWKRSKVPLWQS Trigger: GGACTGCCACAACGGGACCTTTGACCTCTTCCACGTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGCTGGCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR TCA 90 bp | TCATCTCCTTCATGCGCTCAGGCACAACAGACTCAGCCCGGAACTTaGGCAGGGTGCTGGTCTCCACGCTGGTCTGCATGCCCACTGTAC | + |
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Preference number: 1 (lower is better) Translates to: SSPSCAQAQQTQPGT*AGCWSPRWSACPLY Trigger: GTACAGTGGGCATGCAGACCAGCGTGGAGACCAGCACCCTGCTCAAGTTCCGGGCTGAGTCTGTTGTGCCTGAGCGCATGAAGGAGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CCA 90 bp | TTGGGGCCAGCATCAAATGTGTATGCCACCTTCGTCTGCCCCTGGTaGGTGTTGAAGCGGTGGACTAGCTGGATGATGCGCCTGGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: LGPASNVYATFVCPW*VLKRWTSWMMRLEV Trigger: CACCTCCAGGCGCATCATCCAGCTAGTCCACCGCTTCAACACCCACCAGGGGCAGACGAAGGTGGCATACACATTTGATGCTGGCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 90 bp | ATCACAGCGTTGGGGCCAGCATCAAATGTGTATGCCACCTTCGTCTaGCCCTGGTGGGTGTTGAAGCGGTGGACTAGCTGGATGATGCGC | + |
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Preference number: 1 (lower is better) Translates to: ITALGPASNVYATFV*PWWVLKRWTSWMMR Trigger: GCGCATCATCCAGCTAGTCCACCGCTTCAACACCCACCAGGGGCAGACGAAGGTGGCATACACATTTGATGCTGGCCCCAACGCTGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 90 bp | CCTTCATGGTCAGCTGGGCAAAGCCCTGAAAGTCCTGCTCTTGGATaGAGCGGGTCATCTCCTTCATGCGCTCAGGCACAACAGACTCAG | + |
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Preference number: 1 (lower is better) Translates to: PSWSAGQSPESPALG*SGSSPSCAQAQQTQ Trigger: CTGAGTCTGTTGTGCCTGAGCGCATGAAGGAGATGACCCGCTGCATCCAAGAGCAGGACTTTCAGGGCTTTGCCCAGCTGACCATGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 90 bp | GCAGGAACAGCACACTTTATTCCTGTGGTCCTCAGGTCCACTGACTaGACCCTCATGAGGCACCCACACACACAATGGACCCTACCTGTG | + |
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Preference number: 1 (lower is better) Translates to: AGTAHFIPVVLRSTD*TLMRHPHTQWTLPV Trigger: CACAGGTAGGGTCCATTGTGTGTGTGGGTGCCTCATGAGGGTGCAGTCAGTGGACCTGAGGACCACAGGAATAAAGTGTGCTGTTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| 3UTR GCA 90 bp | AGGAGATCGGTGGGAAGGTGTCCAGGCAGGTGGCATGAAACTGGTTaGTATCCTTCATGGTCAGCTGGGCAAAGCCCTGAAAGTCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: RRSVGRCPGRWHETG*YPSWSAGQSPESPA Trigger: AGCAGGACTTTCAGGGCTTTGCCCAGCTGACCATGAAGGATAGCAACCAGTTTCATGCCACCTGCCTGGACACCTTCCCACCGATCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CCA 90 bp | GGAAGGTGTCCAGGCAGGTGGCATGAAACTGGTTGCTATCCTTCATaGTCAGCTGGGCAAAGCCCTGAAAGTCCTGCTCTTGGATGCAGC | + |
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Preference number: 1 (lower is better) Translates to: GRCPGRWHETGCYPS*SAGQSPESPALGCS Trigger: GCTGCATCCAAGAGCAGGACTTTCAGGGCTTTGCCCAGCTGACCATGAAGGATAGCAACCAGTTTCATGCCACCTGCCTGGACACCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CCA 90 bp | GAAGAACAGGTGCCACCTGCAGCCCCTTTAGGAACTTGTCTCCATTaGCTGCAGGGGGAAAGCTGTGTCTTACAGCTGCCACAAACTCAG | + |
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Preference number: 1 (lower is better) Translates to: EEQVPPAAPLGTCLH*LQGESCVLQLPQTQ Trigger: CTGAGTTTGTGGCAGCTGTAAGACACAGCTTTCCCCCTGCAGCCAATGGAGACAAGTTCCTAAAGGGGCTGCAGGTGGCACCTGTTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 90 bp | GAACTTGTCTCCATTGGCTGCAGGGGGAAAGCTGTGTCTTACAGCTaGCACAAACTCAGCCACAGTGTCCTCCAGAGTGAAGATCACAGC | + |
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Preference number: 1 (lower is better) Translates to: ELVSIGCRGKAVSYS*HKLSHSVLQSEDHS Trigger: GCTGTGATCTTCACTCTGGAGGACACTGTGGCTGAGTTTGTGGCAGCTGTAAGACACAGCTTTCCCCCTGCAGCCAATGGAGACAAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATCGATCATCAAGCAGCCCTTCAGGAGAGGCTGACCAGCAGGCCAGCTCCCGCGGCACGCACTGCCTaGGCCCCGCCGAGCCACTTC | + |
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Preference number: 2 (lower is better) Translates to: IIDHQAALQERLTSRPAPAARTA*APPSHF Trigger: GAAGTGGCTCGGCGGGGCTCAGGCAGTGCGTGCCGC...GGGAGCTGGCCTGCTGGTCAGCCTCTCCTGAAGGGCTGCTTGATGATCGATTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTCAGCTAGCCCTTCAGCCCTTCAGGAGAGGCTaGCCAGCAGGCCAGCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: SSCLECWKVHRVGQLALQPFRRG*PAGQLP Trigger: CGGGAGCTGGCCTGCTGGTCAGCCTCTCCTGAAGGG...CTGAAGGGCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGGTGTTGAAGCGGTGGACTAGCTGGATGATGCGCCTGGAGGTGTCATTGGCAGGCCTGGAGCCGTaGCTGCCCCACGTCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: WWVLKRWTSWMMRLEVSLAGLEP*LPHVLL Trigger: GAGGAGGACGTGGGGCAGCCACGGCTCCAGGCCTGC...CAATGACACCTCCAGGCGCATCATCCAGCTAGTCCACCGCTTCAACACCCACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCACTGACTGCACCCTCATGAGGCACCCACACACACAATGGACCCTACCTTCTCTCAGGCAGGCCTaGAGCCGTGGCTGCCCCACG | + |
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Preference number: 2 (lower is better) Translates to: RSTDCTLMRHPHTQWTLPSLRQA*SRGCPT Trigger: CGTGGGGCAGCCACGGCTCCAGGCCTGCCTGAGAGA...AGGTAGGGTCCATTGTGTGTGTGGGTGCCTCATGAGGGTGCAGTCAGTGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CAA 90 bp | GTCATCTCCTTCATGCGCTCAGGCACAACAGACTCAGCCCGGAACTaGAGCAGGGTGCTGGTCTCCACGCTGGTCTGCATGCCCACTGTA | + |
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Preference number: 2 (lower is better) Translates to: VISFMRSGTTDSARN*SRVLVSTLVCMPTV Trigger: TACAGTGGGCATGCAGACCAGCGTGGAGACCAGCACCCTGCTCAAGTTCCGGGCTGAGTCTGTTGTGCCTGAGCGCATGAAGGAGATGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR-3UTR TCA 90 bp | TCGCCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTATAATCGATCATCACCCTTCAGGAGAGGCTaGCCAGCAGGCCAGCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: SPRWLPITLDIPQYNRSSPFRRG*PAGQLP Trigger: CGGGAGCTGGCCTGCTGGTCAGCCTCTCCTGAAGGG...TGATGATCGATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGGCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCCCATCTGCCACTCCACAAAGCCCCCATAGAGACTGCGGCACGCACTGCCGGGGAAGTTGTTCACTaGCGCCACGTGCACCTTATA | + |
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Preference number: 2 (lower is better) Translates to: FPHLPLHKAPIETAARTAGEVVH*RHVHLI Trigger: TATAAGGTGCACGTGGCGTCAGTGAACAACTTCCCC...GGCAGTGCGTGCCGCAGTCTCTATGGGGGCTTTGTGGAGTGGCAGATGGGGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCAGCTCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAATGGCACTGGACTGGGTGTTGAAGCGGTaGACTAGCTGGATGATGCGC | + |
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Preference number: 2 (lower is better) Translates to: QASSRVPVGNPFLQMALDWVLKR*TSWMMR Trigger: GCGCATCATCCAGCTAGTCCACCGCTTCAACACCCA...GTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGCTGGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAATGTGTATGCCACCTTCGTCTGCCCCTGGTGGGTGTTGAAGCGGTGGACTGGTCCTCAGGTCCACTaGCTGCACCCTCATGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SNVYATFVCPWWVLKRWTGPQVH*LHPHEA Trigger: TGCCTCATGAGGGTGCAGTCAGTGGACCTGAGGACC...AGTCCACCGCTTCAACACCCACCAGGGGCAGACGAAGGTGGCATACACATTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGATGAGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTCAGCTAGCAGCAGCTGTCTGGAGTaGTGGAAGGTCCATCGAGTG | + |
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Preference number: 2 (lower is better) Translates to: PDEQLSGVLEGPSSGSASSSCLE*WKVHRV Trigger: CACTCGATGGACCTTCCAGCACTCCAGACAGCTGCT...GCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCATCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCCATCCCTGATGAGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTAGCAGCTGTCTGGAGTaGTGGAAGGTCCATCGAGTG | + |
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Preference number: 2 (lower is better) Translates to: SPSLMSSCLECWKVHRVGSSCLE*WKVHRV Trigger: CACTCGATGGACCTTCCAGCACTCCAGACAGCTGCT...ACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCATCAGGGATGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| 3UTR CAA 90 bp | CCAGCATCAAATGTGTATGCCACCTTCGTCTGCCCCTGGTGGGTGTaGAAGCGGTGGACTAGCTGGATGATGCGCCTGGAGGTGTCATTG | + |
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Preference number: 2 (lower is better) Translates to: PASNVYATFVCPWWV*KRWTSWMMRLEVSL Trigger: CAATGACACCTCCAGGCGCATCATCCAGCTAGTCCACCGCTTCAACACCCACCAGGGGCAGACGAAGGTGGCATACACATTTGATGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CAA 90 bp | GCTATCCTTCATGGTCAGCTGGGCAAAGCCCTGAAAGTCCTGCTCTaGGATGCAGCGGGTCATCTCCTTCATGCGCTCAGGCACAACAGA | + |
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Preference number: 2 (lower is better) Translates to: AILHGQLGKALKVLL*DAAGHLLHALRHNR Trigger: TCTGTTGTGCCTGAGCGCATGAAGGAGATGACCCGCTGCATCCAAGAGCAGGACTTTCAGGGCTTTGCCCAGCTGACCATGAAGGATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCCATCCCTGATGAGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTGCTGTGTCTTACAGCTaGCACAAACTCAGCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: SPSLMSSCLECWKVHRVGAVSYS*HKLSHS Trigger: ACTGTGGCTGAGTTTGTGGCAGCTGTAAGACACAGC...ACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCATCAGGGATGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCCTCCAGAGTGAAGATCACAGCGTTGGGGCCAGCATCAAATGTGTATGCAAGCGGTGGACTAGCTaGATGATGCGCCTGGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: SVLQSEDHSVGASIKCVCKRWTS*MMRLEV Trigger: CACCTCCAGGCGCATCATCCAGCTAGTCCACCGCTT...GCATACACATTTGATGCTGGCCCCAACGCTGTGATCTTCACTCTGGAGGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CAA 90 bp | AGAAGAACAGGTGCCACCTGCAGCCCCTTTAGGAACTTGTCTCCATaGGCTGCAGGGGGAAAGCTGTGTCTTACAGCTGCCACAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: RRTGATCSPFRNLSP*AAGGKLCLTAATNS Trigger: TGAGTTTGTGGCAGCTGTAAGACACAGCTTTCCCCCTGCAGCCAATGGAGACAAGTTCCTAAAGGGGCTGCAGGTGGCACCTGTTCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGCCCATCACACTCGACATCCCCCAGTATAATCGATCATCAAGCAGCCCTTCCAGGCAGGTGGCATaGAACTGGTTGCTATCCTTC | + |
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Preference number: 2 (lower is better) Translates to: WLPITLDIPQYNRSSSSPSRQVA*NWLLSF Trigger: GAAGGATAGCAACCAGTTTCATGCCACCTGCCTGGA...AGGGCTGCTTGATGATCGATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGGTGTTGAAGCGGTGGACTAGCTGGATGATGCGCCTGGAGGTGTCATTGCACACTTTATTCCTGTaGTCCTCAGGTCCACTGACT | + |
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Preference number: 2 (lower is better) Translates to: WWVLKRWTSWMMRLEVSLHTLFL*SSGPLT Trigger: AGTCAGTGGACCTGAGGACCACAGGAATAAAGTGTG...CAATGACACCTCCAGGCGCATCATCCAGCTAGTCCACCGCTTCAACACCCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CCA 72 bp | TTCCGAGCCAGGCGGCGAATCTCTCTCAGGCAGGCCTaGAGCCGTGGCTGCCCCACGTCCTCCTCGCGACCA | + |
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Preference number: 3 (lower is better) Translates to: FRARRRISLRQA*SRGCPTSSSRP Trigger: TGGTCGCGAGGAGGACGTGGGGCAGCCACGGCTCCAGGCCTGCCTGAGAGAGATTCGCCGCCTGGCTCGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 72 bp | CGGCGAATCTCTCTCAGGCAGGCCTGGAGCCGTGGCTaGCCCACGTCCTCCTCGCGACCATTCAGCCAGATG | + |
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Preference number: 3 (lower is better) Translates to: RRISLRQAWSRG*PTSSSRPFSQM Trigger: CATCTGGCTGAATGGTCGCGAGGAGGACGTGGGGCAGCCACGGCTCCAGGCCTGCCTGAGAGAGATTCGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 72 bp | ACTCCACAAAGCCCCCATAGAGACTGCGGCACGCACTaGCTGAGCCCCGCCGAGCCACTTCGGAGAGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: TPQSPHRDCGTH*LSPAEPLRRGL Trigger: GAGACCTCTCCGAAGTGGCTCGGCGGGGCTCAGGCAGTGCGTGCCGCAGTCTCTATGGGGGCTTTGTGGAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CCA 72 bp | TTGTCGGCGCTCACCACAAGGATAAGGATTCGGAGCTaGGGCCAGTGCCACTCTGGGGCTATCTGCCGGGCG | + |
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Preference number: 3 (lower is better) Translates to: LSALTTRIRIRS*GQCHSGAICRA Trigger: CGCCCGGCAGATAGCCCCAGAGTGGCACTGGCCCCAGCTCCGAATCCTTATCCTTGTGGTGAGCGCCGACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR TCA 72 bp | GGACGCCAGGCCTGCAGCAGTGGGGAAGTTGTTCACTaGCGCCACGTGCACCTTATAGCTGAGGCTGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GRQACSSGEVVH*RHVHLIAEAEG Trigger: CCCCTCAGCCTCAGCTATAAGGTGCACGTGGCGTCAGTGAACAACTTCCCCACTGCTGCAGGCCTGGCGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 72 bp | CTCACCACAAGGATAAGGATTCGGAGCTGGGGCCAGTaGCACTCTGGGGCTATCTGCCGGGCGATGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: LTTRIRIRSWGQ*HSGAICRAMLS Trigger: GGACAGCATCGCCCGGCAGATAGCCCCAGAGTGGCACTGGCCCCAGCTCCGAATCCTTATCCTTGTGGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR CCA 72 bp | GAGAGGCTGACCAGCAGGCCAGCTCCCGAGTTCCAGTaGGCAACCCCTTTCTCCAAATGGCACTGGACGTGG | + |
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Preference number: 3 (lower is better) Translates to: ERLTSRPAPEFQ*ATPFSKWHWTW Trigger: CCACGTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGCTGGCCTGCTGGTCAGCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| 3UTR TCA 72 bp | TCATGCGCTCAGGCACAACAGACTCAGCCCGGAACTTaGGCAGGGTGCTGGTCTCCACGCTGGTCTGCATGC | + |
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Preference number: 3 (lower is better) Translates to: SCAQAQQTQPGT*AGCWSPRWSAC Trigger: GCATGCAGACCAGCGTGGAGACCAGCACCCTGCTCAAGTTCCGGGCTGAGTCTGTTGTGCCTGAGCGCATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| 3UTR GCA 72 bp | ACCGACTCCCCATCCCTGATGAGCAGCTGTCTGGAGTaGTGGAAGGTCCATCGAGTGGGTCAGCTAGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: TDSPSLMSSCLE*WKVHRVGQLAL Trigger: AAGGGCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCATCAGGGATGGGGAGTCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
||
| 3UTR CCA 72 bp | GACTCCCCATCCCTGATGAGCAGCTGTCTGGAGTGCTaGAAGGTCCATCGAGTGGGTCAGCTAGCCCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DSPSLMSSCLEC*KVHRVGQLALQ Trigger: CTGAAGGGCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCATCAGGGATGGGGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
||
| 3UTR TCA 72 bp | TTCCTGTGGTCCTCAGGTCCACTGACTGCACCCTCATaGGGCACCCACACACACAATGGACCCTACCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLWSSGPLTAPS*GTHTHNGPYLW Trigger: CCACAGGTAGGGTCCATTGTGTGTGTGGGTGCCTCATGAGGGTGCAGTCAGTGGACCTGAGGACCACAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
||
| 3UTR GCA 72 bp | TTGGGGCCAGCATCAAATGTGTATGCCACCTTCGTCTaGCCCTGGTGGGTGTTGAAGCGGTGGACTAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGPASNVYATFV*PWWVLKRWTSW Trigger: CCAGCTAGTCCACCGCTTCAACACCCACCAGGGGCAGACGAAGGTGGCATACACATTTGATGCTGGCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| 3UTR CCA 72 bp | GCTCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAATaGCACTGGACGTGGAAGAGGTCAAAGGTCCCGTTG | + |
|
Preference number: 3 (lower is better) Translates to: APEFQWATPFSK*HWTWKRSKVPL Trigger: CAACGGGACCTTTGACCTCTTCCACGTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAATGGCACTGGACGTGGAACTGAAAGTCCTGCTCTaGGATGCAGCGGGTCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSRVPVGNPFLQMALDVELKVLL*DAAGHL Trigger: GAGATGACCCGCTGCATCCAAGAGCAGGACTTTCAG...TTCCACGTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| 3UTR CCA 72 bp | GCATCAAATGTGTATGCCACCTTCGTCTGCCCCTGGTaGGTGTTGAAGCGGTGGACTAGCTGGATGATGCGC | + |
|
Preference number: 3 (lower is better) Translates to: ASNVYATFVCPW*VLKRWTSWMMR Trigger: GCGCATCATCCAGCTAGTCCACCGCTTCAACACCCACCAGGGGCAGACGAAGGTGGCATACACATTTGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| 3UTR CCA 72 bp | CAGTGGGCAACCCCTTTCTCCAAATGGCACTGGACGTaGAAGAGGTCAAAGGTCCCGTTGTGGCAGTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: QWATPFSKWHWT*KRSKVPLWQSI Trigger: GATGGACTGCCACAACGGGACCTTTGACCTCTTCCACGTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| 3UTR GCA 72 bp | GCACACTTTATTCCTGTGGTCCTCAGGTCCACTGACTaGACCCTCATGAGGCACCCACACACACAATGGACC | + |
|
Preference number: 3 (lower is better) Translates to: AHFIPVVLRSTD*TLMRHPHTQWT Trigger: GGTCCATTGTGTGTGTGGGTGCCTCATGAGGGTGCAGTCAGTGGACCTGAGGACCACAGGAATAAAGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
||
| 3UTR GCA 72 bp | GTGGGAAGGTGTCCAGGCAGGTGGCATGAAACTGGTTaGTATCCTTCATGGTCAGCTGGGCAAAGCCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VGRCPGRWHETG*YPSWSAGQSPE Trigger: TTCAGGGCTTTGCCCAGCTGACCATGAAGGATAGCAACCAGTTTCATGCCACCTGCCTGGACACCTTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| 3UTR CCA 72 bp | CCAGCATCAAATGTGTATGCCACCTTCGTCTGCCCCTaGTGGGTGTTGAAGCGGTGGACTAGCTGGATGATG | + |
|
Preference number: 3 (lower is better) Translates to: PASNVYATFVCP*WVLKRWTSWMM Trigger: CATCATCCAGCTAGTCCACCGCTTCAACACCCACCAGGGGCAGACGAAGGTGGCATACACATTTGATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| 3UTR TCA 72 bp | ACCCTCACCAGGAGGCTTTATAAAGAAACTGTGGCCTaGGTCTCAGCAGAGAGGCACCGCTGTCTGAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TLTRRLYKETVA*VSAERHRCLSH Trigger: ATGGCTCAGACAGCGGTGCCTCTCTGCTGAGACTCAGGCCACAGTTTCTTTATAAAGCCTCCTGGTGAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
||
| 3UTR GCA 72 bp | TCCATTGGCTGCAGGGGGAAAGCTGTGTCTTACAGCTaGCACAAACTCAGCCACAGTGTCCTCCAGAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SIGCRGKAVSYS*HKLSHSVLQSE Trigger: TTCACTCTGGAGGACACTGTGGCTGAGTTTGTGGCAGCTGTAAGACACAGCTTTCCCCCTGCAGCCAATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| 3UTR CCA 72 bp | CCAGGCAGGTGGCATGAAACTGGTTGCTATCCTTCATaGTCAGCTGGGCAAAGCCCTGAAAGTCCTGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PGRWHETGCYPS*SAGQSPESPAL Trigger: AAGAGCAGGACTTTCAGGGCTTTGCCCAGCTGACCATGAAGGATAGCAACCAGTTTCATGCCACCTGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| 3UTR TCA 72 bp | AACAGCACACTTTATTCCTGTGGTCCTCAGGTCCACTaGCTGCACCCTCATGAGGCACCCACACACACAATG | + |
|
Preference number: 3 (lower is better) Translates to: NSTLYSCGPQVH*LHPHEAPTHTM Trigger: CATTGTGTGTGTGGGTGCCTCATGAGGGTGCAGTCAGTGGACCTGAGGACCACAGGAATAAAGTGTGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
||
| CDS-3UTR TCA 90 bp | TCATCAAGCAGCCCTTCAGGAGAGGCTGACCAGCAGGCCAGCTCCCGAGTTCCAGCGGCACGCACTGCCTaGGCCCCGCCGAGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSPSGEADQQASSRVPAARTA*APPSHF Trigger: GAAGTGGCTCGGCGGGGCTCAGGCAGTGCGTGCCGC...TGGAACTCGGGAGCTGGCCTGCTGGTCAGCCTCTCCTGAAGGGCTGCTTGATGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCACCCACACACACAATGGACCCTACCTGTGGGCTCGACAGCCCCTACCTCTCTCAGGCAGGCCTaGAGCCGTGGCTGCCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: MRHPHTQWTLPVGSTAPTSLRQA*SRGCPT Trigger: CGTGGGGCAGCCACGGCTCCAGGCCTGCCTGAGAGA...GGTAGGGGCTGTCGAGCCCACAGGTAGGGTCCATTGTGTGTGTGGGTGCCTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR CCA 90 bp | GCGGCTGAGGACGCCAGGCCTGCAGCAGTGGGGAAGTTGTTCACTGACGCCACGCTTTGGGTCTGGTCCTaGTGCAGCGTGACGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAEDARPAAVGKLFTDATLWVWS*CSVTLR Trigger: CCTGAGCGTCACGCTGCACCAGGACCAGACCCAAAG...CGTGGCGTCAGTGAACAACTTCCCCACTGCTGCAGGCCTGGCGTCCTCAGCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGACCAGCAGGCCAGCTCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAACGGAGCTGGGGCCAGTaGCACTCTGGGGCTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLTSRPAPEFQWATPFSKRSWGQ*HSGAIC Trigger: GCAGATAGCCCCAGAGTGGCACTGGCCCCAGCTCCG...TTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGCTGGCCTGCTGGTCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR TCA 90 bp | CCTCATGAGGCACCCACACACACAATGGACCCTACCTGTGGGCTCGACAGCCCCCGCTCAGGGAGGAGTTaGTGGGCAGGATCAGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHEAPTHTMDPTCGLDSPRSGRS*WAGSAL Trigger: AAGCGCTGATCCTGCCCATCAACTCCTCCCTGAGCG...GGGGCTGTCGAGCCCACAGGTAGGGTCCATTGTGTGTGTGGGTGCCTCATGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTGCCCATCACACTCGACATCCCCCAGTATAATCGATCATCAAGCAGCCCTGCAGGCCTGGAGCCGTaGCTGCCCCACGTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WLPITLDIPQYNRSSSSPAGLEP*LPHVLL Trigger: GAGGAGGACGTGGGGCAGCCACGGCTCCAGGCCTGC...AGGGCTGCTTGATGATCGATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR CCA 90 bp | AGGCTGACCAGCAGGCCAGCTCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAAACCTTCGTCTGCCCCTaGTGGGTGTTGAAGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLTSRPAPEFQWATPFSKTFVCP*WVLKRW Trigger: CCACCGCTTCAACACCCACCAGGGGCAGACGAAGGT...TTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGCTGGCCTGCTGGTCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR TCA 90 bp | CCTGATGAGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTCAGCTAGCCGCTCAGGGAGGAGTTaGTGGGCAGGATCAGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PDEQLSGVLEGPSSGSASRSGRS*WAGSAL Trigger: AAGCGCTGATCCTGCCCATCAACTCCTCCCTGAGCG...GCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCATCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
||
| CDS-3UTR TCA 90 bp | GAGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTCAGCTAGCCCTTCAACTCAGCCCGGAACTTaGGCAGGGTGCTGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EQLSGVLEGPSSGSASPSTQPGT*AGCWSP Trigger: TGGAGACCAGCACCCTGCTCAAGTTCCGGGCTGAGT...TGAAGGGCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR CCA 90 bp | CAGGCCAGCTCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAATGGCACTGGACTGCTGGTCTCCACGCTaGTCTGCATGCCCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QASSRVPVGNPFLQMALDCWSPR*SACPLY Trigger: GTACAGTGGGCATGCAGACCAGCGTGGAGACCAGCA...GTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGCTGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR CCA 90 bp | ATCGATCATCAAGCAGCCCTTCAGGAGAGGCTGACCAGCAGGCCAGCTCCCGAGGAGGTAGGAGATCGGTaGGAAGGTGTCCAGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IDHQAALQERLTSRPAPEEVGDR*EGVQAG Trigger: ACCTGCCTGGACACCTTCCCACCGATCTCCTACCTC...CTCGGGAGCTGGCCTGCTGGTCAGCCTCTCCTGAAGGGCTGCTTGATGATCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR CCA 90 bp | ATCGATCATCAAGCAGCCCTTCAGGAGAGGCTGACCAGCAGGCCAGCTCCCGAGAAGCGGTGGACTAGCTaGATGATGCGCCTGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IDHQAALQERLTSRPAPEKRWTS*MMRLEV Trigger: CACCTCCAGGCGCATCATCCAGCTAGTCCACCGCTT...CTCGGGAGCTGGCCTGCTGGTCAGCCTCTCCTGAAGGGCTGCTTGATGATCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGGGCCAGTGCCACTCTGGGGCTATCTGCCGGGCGATGCTGTCCTTCCAGAACCATGGACACCTaGTCCCTCTTGAGTAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GAGASATLGLSAGRCCPSRTMDT*SLLSKG Trigger: TCCTTTACTCAAGAGGGACCAGGTGTCCATGGTTCT...GGAAGGACAGCATCGCCCGGCAGATAGCCCCAGAGTGGCACTGGCCCCAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| 3UTR CAA 72 bp | TTCATGCGCTCAGGCACAACAGACTCAGCCCGGAACTaGAGCAGGGTGCTGGTCTCCACGCTGGTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FMRSGTTDSARN*SRVLVSTLVCM Trigger: CATGCAGACCAGCGTGGAGACCAGCACCCTGCTCAAGTTCCGGGCTGAGTCTGTTGTGCCTGAGCGCATGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAATGGCACTGGACGTGGAAGTCTCCACGCTGGTCTaGATGCCCACTGTACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSRVPVGNPFLQMALDVEVSTLV*MPTVLP Trigger: GGGCAGTACAGTGGGCATGCAGACCAGCGTGGAGAC...TTCCACGTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCACCCACACACACAATGGACCCTACCTGTGGGCTCGACAGCCCCTACCGTGGTCGTTTTTAGCTaGTCCTGGTGCAGCGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: MRHPHTQWTLPVGSTAPTVVVFS*SWCSVT Trigger: CGTCACGCTGCACCAGGACCAGCTAAAAACGACCAC...GGTAGGGGCTGTCGAGCCCACAGGTAGGGTCCATTGTGTGTGTGGGTGCCTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR TCA 90 bp | CCTGATGAGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTCAGCTAGCAGCTGGGCAAAGCCCTaGAAGTCCTGCTCTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PDEQLSGVLEGPSSGSASSWAKP*KSCSWM Trigger: CATCCAAGAGCAGGACTTTCAGGGCTTTGCCCAGCT...GCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCATCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR GCA 90 bp | AGGCTGACCAGCAGGCCAGCTCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAACCAGTACTTGATAACTaGGATGTTGACCGGCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RLTSRPAPEFQWATPFSKPVLDN*DVDRRR Trigger: ACGGCGCCGGTCAACATCGCAGTTATCAAGTACTGG...TTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGCTGGCCTGCTGGTCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTCAGCTAGCCCTTCAGGTTTTTAGCTGGTCCTaGTGCAGCGTGACGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCLECWKVHRVGQLALQVFSWS*CSVTLR Trigger: CCTGAGCGTCACGCTGCACCAGGACCAGCTAAAAAC...CTGAAGGGCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR CCA 90 bp | TCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAATGGCACTGGACGTGGAAGAGCCAGGCCTGCAGCAGTaGGGAAGTTGTTCACTGACG | + |
|
Preference number: 4 (lower is better) Translates to: SRVPVGNPFLQMALDVEEPGLQQ*GSCSLT Trigger: CGTCAGTGAACAACTTCCCCACTGCTGCAGGCCTGG...CTCTTCCACGTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTCAGCTAGCCCTTCAGTGGGTGTTGAAGCGGTaGACTAGCTGGATGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSCLECWKVHRVGQLALQWVLKR*TSWMMR Trigger: GCGCATCATCCAGCTAGTCCACCGCTTCAACACCCA...CTGAAGGGCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| 3UTR CAA 72 bp | AATGTGTATGCCACCTTCGTCTGCCCCTGGTGGGTGTaGAAGCGGTGGACTAGCTGGATGATGCGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NVYATFVCPWWV*KRWTSWMMRLE Trigger: CTCCAGGCGCATCATCCAGCTAGTCCACCGCTTCAACACCCACCAGGGGCAGACGAAGGTGGCATACACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| CDS-3UTR TCA 90 bp | CCTGATGAGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTCAGCTAGCTCCAGGCAGGTGGCATaGAACTGGTTGCTATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PDEQLSGVLEGPSSGSASSRQVA*NWLLSF Trigger: GAAGGATAGCAACCAGTTTCATGCCACCTGCCTGGA...GCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCATCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR GCA 90 bp | GGTTCCCGTGATCGCCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTATATATGCCACCTTCGTCTaGCCCTGGTGGGTGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRDRLDGCPSHSTSPSIYATFV*PWWVLK Trigger: CTTCAACACCCACCAGGGGCAGACGAAGGTGGCATA...TATACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGGCGATCACGGGAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR CCA 90 bp | TCGCCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTATAATCGATCATCACCGTGGCTTTGGGTCTaGTCCTGGTGCAGCGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: SPRWLPITLDIPQYNRSSPWLWV*SWCSVT Trigger: CGTCACGCTGCACCAGGACCAGACCCAAAGCCACGG...TGATGATCGATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGGCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| CDS-3UTR CCA 90 bp | TCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAATGGCACTGGACGTGGAAGAGGGAACTTGTCTCCATTaGCTGCAGGGGGAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRVPVGNPFLQMALDVEEGTCLH*LQGESC Trigger: ACAGCTTTCCCCCTGCAGCCAATGGAGACAAGTTCC...CTCTTCCACGTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR TCA 90 bp | TCGCCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTATAATCGATCATCACAGTGTCCTCCAGAGTaGAGATCACAGCGTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRWLPITLDIPQYNRSSQCPPE*RSQRWG Trigger: GCCCCAACGCTGTGATCTTCACTCTGGAGGACACTG...TGATGATCGATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGGCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| 3UTR CAA 72 bp | AGAAGAACAGGTGCCACCTGCAGCCCCTTTAGGAACTaGTCTCCATTGGCTGCAGGGGGAAAGCTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRTGATCSPFRN*SPLAAGGKLCL Trigger: AAGACACAGCTTTCCCCCTGCAGCCAATGGAGACAAGTTCCTAAAGGGGCTGCAGGTGGCACCTGTTCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| CDS-3UTR GCA 90 bp | TCCCGTGATCGCCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTATAATCGCTGTGTCTTACAGCTaGCACAAACTCAGCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRDRLDGCPSHSTSPSIIAVSYS*HKLSHS Trigger: ACTGTGGCTGAGTTTGTGGCAGCTGTAAGACACAGC...GATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGGCGATCACGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| 3UTR CAA 72 bp | CGACCATTCAGCCAGATGCGGTCCTCTGTGAAGTCCTaGCTAATGGCAACGGTTGTGGTCGTTTTTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPFSQMRSSVKS*LMATVVVVFSC Trigger: GCAGCTAAAAACGACCACAACCGTTGCCATTAGCAAGGACTTCACAGAGGACCGCATCTGGCTGAATGGTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
||
| CDS-3UTR TCA 90 bp | CCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTATAATCGATCATCAAGCGGGGAAGTTGTTCACTaGCGCCACGTGCACCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: PRWLPITLDIPQYNRSSSGEVVH*RHVHLI Trigger: TATAAGGTGCACGTGGCGTCAGTGAACAACTTCCCC...GCTTGATGATCGATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
||
| CDS-3UTR GCA 90 bp | TCGCCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTATAATCGATCATCACCAGTACTTGATAACTaGGATGTTGACCGGCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SPRWLPITLDIPQYNRSSPVLDN*DVDRRR Trigger: ACGGCGCCGGTCAACATCGCAGTTATCAAGTACTGG...TGATGATCGATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGGCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTATAATCGATCATCAAGCGGTTGCTATCCTTCATaGTCAGCTGGGCAAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRWLPITLDIPQYNRSSSGCYPS*SAGQSP Trigger: AGGGCTTTGCCCAGCTGACCATGAAGGATAGCAACC...GCTTGATGATCGATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS-3UTR GCA 90 bp | TCCCGTGATCGCCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTATAATCTGGCATGAAACTGGTTaGTATCCTTCATGGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SRDRLDGCPSHSTSPSIIWHETG*YPSWSA Trigger: AGCTGACCATGAAGGATAGCAACCAGTTTCATGCCA...GATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGGCGATCACGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS-3UTR CAA 90 bp | CCCTGGTGGGTGTTGAAGCGGTGGACTAGCTGGATGATGCGCCTGGAGGTGTCAACCAACCCCGTGGCTTaGGGTCTGGTCCTGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: PWWVLKRWTSWMMRLEVSTNPVA*GLVLVQ Trigger: CTGCACCAGGACCAGACCCAAAGCCACGGGGTTGGT...TGACACCTCCAGGCGCATCATCCAGCTAGTCCACCGCTTCAACACCCACCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS-3UTR CAA 90 bp | CCTCATGAGGCACCCACACACACAATGGACCCTACCTGTGGGCTCGACAGCCCCTTGATAACTGCGATGTaGACCGGCGCCGTGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: PHEAPTHTMDPTCGLDSPLITAM*TGAVQV Trigger: CACCTGCACGGCGCCGGTCAACATCGCAGTTATCAA...GGGGCTGTCGAGCCCACAGGTAGGGTCCATTGTGTGTGTGGGTGCCTCATGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| CDS-3UTR CAA 90 bp | GCGGCTGAGGACGCCAGGCCTGCAGCAGTGGGGAAGTTGTTCACTGACGCCACGCGCTTCCCCCAGTACTaGATAACTGCGATGTTGACC | + |
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Preference number: 5 (lower is better) Translates to: AAEDARPAAVGKLFTDATRFPQY*ITAMLT Trigger: GGTCAACATCGCAGTTATCAAGTACTGGGGGAAGCG...CGTGGCGTCAGTGAACAACTTCCCCACTGCTGCAGGCCTGGCGTCCTCAGCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS GCA 90 bp | GAATCGGACGTAAAACCAACCCCGTGGCTTTGGGTCTGGTCCTGGTaGAGCGTGACGCTCAGGGAGGAGTTGATGGGCAGGATCAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: ESDVKPTPWLWVWSW*SVTLREELMGRISA Trigger: AGCGCTGATCCTGCCCATCAACTCCTCCCTGAGCGTCACGCTGCACCAGGACCAGACCCAAAGCCACGGGGTTGGTTTTACGTCCGATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS-3UTR CAA 90 bp | ACAGACTCAGCCCGGAACTTGAGCAGGGTGCTGGTCTCCACGCTGGTCTGCATGTTGATAACTGCGATGTaGACCGGCGCCGTGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: TDSARNLSRVLVSTLVCMLITAM*TGAVQV Trigger: CACCTGCACGGCGCCGGTCAACATCGCAGTTATCAA...CATGCAGACCAGCGTGGAGACCAGCACCCTGCTCAAGTTCCGGGCTGAGTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS CCA 90 bp | AAGGAATCGGACGTAAAACCAACCCCGTGGCTTTGGGTCTGGTCCTaGTGCAGCGTGACGCTCAGGGAGGAGTTGATGGGCAGGATCAGC | + |
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Preference number: 5 (lower is better) Translates to: KESDVKPTPWLWVWS*CSVTLREELMGRIS Trigger: GCTGATCCTGCCCATCAACTCCTCCCTGAGCGTCACGCTGCACCAGGACCAGACCCAAAGCCACGGGGTTGGTTTTACGTCCGATTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS-3UTR CAA 90 bp | TCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAATGGCACTGGACGTGGAAGAGACGCTCAGGGAGGAGTaGATGGGCAGGATCAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: SRVPVGNPFLQMALDVEETLREE*MGRISA Trigger: AGCGCTGATCCTGCCCATCAACTCCTCCCTGAGCGT...CTCTTCCACGTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| CDS-3UTR CAA 90 bp | AGGGGTTCCCGTGATCGCCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTCGCTTCCCCCAGTACTaGATAACTGCGATGTTGACC | + |
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Preference number: 5 (lower is better) Translates to: RGSRDRLDGCPSHSTSPSRFPQY*ITAMLT Trigger: GGTCAACATCGCAGTTATCAAGTACTGGGGGAAGCG...ACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGGCGATCACGGGAACCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| CDS GCA 90 bp | TCCTTGCTAATGGCAACGGTTGTGGTCGTTTTTAGCTGGTCCTGGTaGAGCGTGACGCTCAGGGAGGAGTTGATGGGCAGGATCAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: SLLMATVVVVFSWSW*SVTLREELMGRISA Trigger: AGCGCTGATCCTGCCCATCAACTCCTCCCTGAGCGTCACGCTGCACCAGGACCAGCTAAAAACGACCACAACCGTTGCCATTAGCAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS-3UTR CAA 90 bp | ATGAGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTCAGCTAGCCCTTCTGAAAGTCCTGCTCTaGGATGCAGCGGGTCATCTC | + |
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Preference number: 5 (lower is better) Translates to: MSSCLECWKVHRVGQLALLKVLL*DAAGHL Trigger: GAGATGACCCGCTGCATCCAAGAGCAGGACTTTCAG...AAGGGCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS-3UTR CAA 90 bp | TCCCCATCCCTGATGAGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTTCCTCTGTGAAGTCCTaGCTAATGGCAACGGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: SPSLMSSCLECWKVHRVGSSVKS*LMATVV Trigger: CACAACCGTTGCCATTAGCAAGGACTTCACAGAGGA...ACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCATCAGGGATGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS-3UTR CAA 90 bp | AGCTCCCGAGTTCCAGTGGGCAACCCCTTTCTCCAAATGGCACTGGACGTGGAAGTGAAGATCACAGCGTaGGGGCCAGCATCAAATGTG | + |
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Preference number: 5 (lower is better) Translates to: SSRVPVGNPFLQMALDVEVKITA*GPASNV Trigger: CACATTTGATGCTGGCCCCAACGCTGTGATCTTCAC...TTCCACGTCCAGTGCCATTTGGAGAAAGGGGTTGCCCACTGGAACTCGGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS-3UTR CAA 90 bp | TCCCGTGATCGCCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTATAATCAGCCCCTTTAGGAACTaGTCTCCATTGGCTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SRDRLDGCPSHSTSPSIISPFRN*SPLAAG Trigger: CCCTGCAGCCAATGGAGACAAGTTCCTAAAGGGGCT...GATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGGCGATCACGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS-3UTR CAA 90 bp | ATGAGCAGCTGTCTGGAGTGCTGGAAGGTCCATCGAGTGGGTCAGCTAGCCCTTGACACCTGGTCCCTCTaGAGTAAAGGAATCGGACGT | + |
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Preference number: 5 (lower is better) Translates to: MSSCLECWKVHRVGQLALDTWSL*SKGIGR Trigger: ACGTCCGATTCCTTTACTCAAGAGGGACCAGGTGTC...AAGGGCTAGCTGACCCACTCGATGGACCTTCCAGCACTCCAGACAGCTGCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS TCA 90 bp | GGTGAGCACTGTCTCACCACAGAACCATGGACACCTGGTCCCTCTTaGGTAAAGGAATCGGACGTAAAACCAACCCCGTGGCTTTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: GEHCLTTEPWTPGPS*VKESDVKPTPWLWV Trigger: GACCCAAAGCCACGGGGTTGGTTTTACGTCCGATTCCTTTACTCAAGAGGGACCAGGTGTCCATGGTTCTGTGGTGAGACAGTGCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS-3UTR CAA 90 bp | TCGCCTAGATGGCTGCCCATCACACTCGACATCCCCCAGTATAATCGATCATCAAGGAACTTGTCTCCATaGGCTGCAGGGGGAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SPRWLPITLDIPQYNRSSRNLSP*AAGGKL Trigger: CAGCTTTCCCCCTGCAGCCAATGGAGACAAGTTCCT...TGATGATCGATTATACTGGGGGATGTCGAGTGTGATGGGCAGCCATCTAGGCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS CAA 72 bp | AGCTGGTCCTGGTGCAGCGTGACGCTCAGGGAGGAGTaGATGGGCAGGATCAGCGCTTCATCTCGCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SWSWCSVTLREE*MGRISASSRFP Trigger: GGGGAAGCGAGATGAAGCGCTGATCCTGCCCATCAACTCCTCCCTGAGCGTCACGCTGCACCAGGACCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS CAA 72 bp | GTCTGGTCCTGGTGCAGCGTGACGCTCAGGGAGGAGTaGATGGGCAGGATCAGCGCTTCATCTCGCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VWSWCSVTLREE*MGRISASSRFP Trigger: GGGGAAGCGAGATGAAGCGCTGATCCTGCCCATCAACTCCTCCCTGAGCGTCACGCTGCACCAGGACCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS CCA 72 bp | GACGTAAAACCAACCCCGTGGCTTTGGGTCTGGTCCTaGTGCAGCGTGACGCTCAGGGAGGAGTTGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: DVKPTPWLWVWS*CSVTLREELMG Trigger: GCCCATCAACTCCTCCCTGAGCGTCACGCTGCACCAGGACCAGACCCAAAGCCACGGGGTTGGTTTTACGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS CAA 90 bp | TGGCTTTGGGTCTGGTCCTGGTGCAGCGTGACGCTCAGGGAGGAGTaGATGGGCAGGATCAGCGCTTCATCTCGCTTCCCCCAGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: WLWVWSWCSVTLREE*MGRISASSRFPQYL Trigger: CAAGTACTGGGGGAAGCGAGATGAAGCGCTGATCCTGCCCATCAACTCCTCCCTGAGCGTCACGCTGCACCAGGACCAGACCCAAAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS CCA 72 bp | GAATCGGACGTAAAACCAACCCCGTGGCTTTGGGTCTaGTCCTGGTGCAGCGTGACGCTCAGGGAGGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: ESDVKPTPWLWV*SWCSVTLREEL Trigger: CAACTCCTCCCTGAGCGTCACGCTGCACCAGGACCAGACCCAAAGCCACGGGGTTGGTTTTACGTCCGATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS CAA 72 bp | GGCAGGATCAGCGCTTCATCTCGCTTCCCCCAGTACTaGATAACTGCGATGTTGACCGGCGCCGTGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GRISASSRFPQY*ITAMLTGAVQV Trigger: CACCTGCACGGCGCCGGTCAACATCGCAGTTATCAAGTACTGGGGGAAGCGAGATGAAGCGCTGATCCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006692.6 ENSMUST00000211883.2 |
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| CDS CAA 90 bp | GTCGTTTTTAGCTGGTCCTGGTGCAGCGTGACGCTCAGGGAGGAGTaGATGGGCAGGATCAGCGCTTCATCTCGCTTCCCCCAGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: VVFSWSWCSVTLREE*MGRISASSRFPQYL Trigger: CAAGTACTGGGGGAAGCGAGATGAAGCGCTGATCCTGCCCATCAACTCCTCCCTGAGCGTCACGCTGCACCAGGACCAGCTAAAAACGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS CCA 72 bp | GTAAAGGAATCGGACGTAAAACCAACCCCGTGGCTTTaGGTCTGGTCCTGGTGCAGCGTGACGCTCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: VKESDVKPTPWL*VWSWCSVTLRE Trigger: CTCCCTGAGCGTCACGCTGCACCAGGACCAGACCCAAAGCCACGGGGTTGGTTTTACGTCCGATTCCTTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS CCA 72 bp | CTAATGGCAACGGTTGTGGTCGTTTTTAGCTGGTCCTaGTGCAGCGTGACGCTCAGGGAGGAGTTGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: LMATVVVVFSWS*CSVTLREELMG Trigger: GCCCATCAACTCCTCCCTGAGCGTCACGCTGCACCAGGACCAGCTAAAAACGACCACAACCGTTGCCATTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS CAA 72 bp | AGTAAAGGAATCGGACGTAAAACCAACCCCGTGGCTTaGGGTCTGGTCCTGGTGCAGCGTGACGCTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SKGIGRKTNPVA*GLVLVQRDAQG Trigger: TCCCTGAGCGTCACGCTGCACCAGGACCAGACCCAAAGCCACGGGGTTGGTTTTACGTCCGATTCCTTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS CAA 90 bp | TCCTCCTCGCGACCATTCAGCCAGATGCGGTCCTCTGTGAAGTCCTaGCTAATGGCAACGGTTGTGGTCGTTTTTAGCTGGTCCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSRPFSQMRSSVKS*LMATVVVVFSWSWC Trigger: GCACCAGGACCAGCTAAAAACGACCACAACCGTTGCCATTAGCAAGGACTTCACAGAGGACCGCATCTGGCTGAATGGTCGCGAGGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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| CDS CAA 90 bp | TCCCTCTTGAGTAAAGGAATCGGACGTAAAACCAACCCCGTGGCTTaGGGTCTGGTCCTGGTGCAGCGTGACGCTCAGGGAGGAGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SLLSKGIGRKTNPVA*GLVLVQRDAQGGVD Trigger: ATCAACTCCTCCCTGAGCGTCACGCTGCACCAGGACCAGACCCAAAGCCACGGGGTTGGTTTTACGTCCGATTCCTTTACTCAAGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS TCA 72 bp | TGTCTCACCACAGAACCATGGACACCTGGTCCCTCTTaGGTAAAGGAATCGGACGTAAAACCAACCCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: CLTTEPWTPGPS*VKESDVKPTPW Trigger: CCACGGGGTTGGTTTTACGTCCGATTCCTTTACTCAAGAGGGACCAGGTGTCCATGGTTCTGTGGTGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211883.2 |
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| CDS CAA 72 bp | CGACCATTCAGCCAGATGCGGTCCTCTGTGAAGTCCTaGCTAATGGCAACGGTTGTGGTCGTTTTTAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RPFSQMRSSVKS*LMATVVVVFSW Trigger: CCAGCTAAAAACGACCACAACCGTTGCCATTAGCAAGGACTTCACAGAGGACCGCATCTGGCTGAATGGTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006692.6 |
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