Pregenerated sensors for MVB12A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031813Ensembl transcript IDs: ENSMUST00000034272.9, ENSMUST00000212326.2, ENSMUST00000212954.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCTGTCCCCAGGGGCATCAGCTTCACACACATGCGTTTCTTCTTaGACACAGAGGCCTCTGACCCTCTGCACGGCAGCCTGCCAGCGG | + |
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Preference number: 1 (lower is better) Translates to: QLSPGASASHTCVSS*TQRPLTLCTAACQR Trigger: CCGCTGGCAGGCTGCCGTGCAGAGGGTCAGAGGCCTCTGTGTCCAAGAAGAAACGCATGTGTGTGAAGCTGATGCCCCTGGGGACAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR GCA 90 bp | TCACAACCACGTCAGCTGTCCCCAGGGGCATCAGCTTCACACACATaGGTTTCTTCTTGGACACAGAGGCCTCTGACCCTCTGCACGGCA | + |
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Preference number: 1 (lower is better) Translates to: SQPRQLSPGASASHT*VSSWTQRPLTLCTA Trigger: TGCCGTGCAGAGGGTCAGAGGCCTCTGTGTCCAAGAAGAAACGCATGTGTGTGAAGCTGATGCCCCTGGGGACAGCTGACGTGGTTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGTCCAGGGAGAGGCCTCGCATGTCCTGGCTGAGCGTGCGGGGCTTGGGCGGACACAGAGGCCTCTaGCCCTCTGCACGGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GGSRERPRMSWLSVRGLGGHRGL*PSARQP Trigger: AGGCTGCCGTGCAGAGGGTCAGAGGCCTCTGTGTCC...GCCCAAGCCCCGCACGCTCAGCCAGGACATGCGAGGCCTCTCCCTGGACCCACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR CAA 90 bp | GGGTCCAGGGAGAGGCCTCGCATGTCCTGGCTGAGCGTGCGGGGCTaGGGCACCGGCCTTGGGGCTTTGGATTTCTTGCACCAGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: GSRERPRMSWLSVRG*GTGLGALDFLHQMA Trigger: TGCCATCTGGTGCAAGAAATCCAAAGCCCCAAGGCCGGTGCCCAAGCCCCGCACGCTCAGCCAGGACATGCGAGGCCTCTCCCTGGACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAGGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTCAATCAGCAGTATCTaGAAGGCAGGAGGCGACCAG | + |
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Preference number: 2 (lower is better) Translates to: REGHCSAQAAPAPPGKRPSISSI*KAGGDQ Trigger: CTGGTCGCCTCCTGCCTTGCAGATACTGCTGATTGA...GGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCCAGGGAGAGGCCTCGCATGTCCTGGCTGAGCGTGCGGGGCTTGGGCACATTTCTTGCACCAGATaGCAAAGCCACCAATGTCCC | + |
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Preference number: 2 (lower is better) Translates to: WVQGEASHVLAERAGLGHISCTR*QSHQCP Trigger: GGGACATTGGTGGCTTTGCCATCTGGTGCAAGAAAT...GTGCCCAAGCCCCGCACGCTCAGCCAGGACATGCGAGGCCTCTCCCTGGACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTGGGGCTTTGGATTTCTTGCACCAGATGGCAAAGCCACCAATGTCCCCCATCAGCTTCACACACATaGGTTTCTTCTTGGACACAG | + |
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Preference number: 2 (lower is better) Translates to: ALGLWISCTRWQSHQCPPSASHT*VSSWTQ Trigger: CTGTGTCCAAGAAGAAACGCATGTGTGTGAAGCTGA...TGGGGGACATTGGTGGCTTTGCCATCTGGTGCAAGAAATCCAAAGCCCCAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR CCA 72 bp | TGCCCATGGGGGTGCCTGAGCCTCACCTGGGCTCTTTaGGTGGGTCCAGGGAGAGGCCTCGCATGTCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: CPWGCLSLTWAL*VGPGRGLACPG Trigger: GCCAGGACATGCGAGGCCTCTCCCTGGACCCACCCAAAGAGCCCAGGTGAGGCTCAGGCACCCCCATGGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR CCA 72 bp | TGGCCCATCTGCCCATGGGGGTGCCTGAGCCTCACCTaGGCTCTTTGGGTGGGTCCAGGGAGAGGCCTCGCA | + |
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Preference number: 3 (lower is better) Translates to: WPICPWGCLSLT*ALWVGPGRGLA Trigger: TGCGAGGCCTCTCCCTGGACCCACCCAAAGAGCCCAGGTGAGGCTCAGGCACCCCCATGGGCAGATGGGCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR TCA 72 bp | AGTCTTCTTCCTGGCCCATCTGCCCATGGGGGTGCCTaGGCCTCACCTGGGCTCTTTGGGTGGGTCCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SLLPGPSAHGGA*ASPGLFGWVQG Trigger: TCCCTGGACCCACCCAAAGAGCCCAGGTGAGGCTCAGGCACCCCCATGGGCAGATGGGCCAGGAAGAAGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR CCA 72 bp | GTCCTGGCTGAGCGTGCGGGGCTTGGGCACCGGCCTTaGGGCTTTGGATTTCTTGCACCAGATGGCAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: VLAERAGLGHRP*GFGFLAPDGKA Trigger: GGCTTTGCCATCTGGTGCAAGAAATCCAAAGCCCCAAGGCCGGTGCCCAAGCCCCGCACGCTCAGCCAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR GCA 72 bp | CTAGACACAGACTTCTGTGAGAGAAGGCCACTGCTCTaGCCAGGCCGCCCCTGCACCACCAGGCAAGAGACC | + |
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Preference number: 3 (lower is better) Translates to: LDTDFCERRPLL*PGRPCTTRQET Trigger: GGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCTCACAGAAGTCTGTGTCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| 3UTR TCA 72 bp | GCTGGTGCATATGTGGCCTCTAGACACAGACTTCTGTaGGAGAAGGCCACTGCTCTGCCCAGGCCGCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: AGAYVASRHRLL*EKATALPRPPL Trigger: CAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCTCACAGAAGTCTGTGTCTAGAGGCCACATATGCACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| 3UTR GCA 72 bp | AGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTaGAAGCAGTTGGACAGAGAGGCTGGGTGTCAATCA | + |
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Preference number: 3 (lower is better) Translates to: RPPLHHQARDPL*KQLDREAGCQS Trigger: TGATTGACACCCAGCCTCTCTGTCCAACTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| 3UTR CCA 72 bp | CCAGGGGCATCAGCTTCACACACATGCGTTTCTTCTTaGACACAGAGGCCTCTGACCCTCTGCACGGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: PGASASHTCVSS*TQRPLTLCTAA Trigger: GGCTGCCGTGCAGAGGGTCAGAGGCCTCTGTGTCCAAGAAGAAACGCATGTGTGTGAAGCTGATGCCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR GCA 72 bp | CGTCAGCTGTCCCCAGGGGCATCAGCTTCACACACATaGGTTTCTTCTTGGACACAGAGGCCTCTGACCCTC | + |
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Preference number: 3 (lower is better) Translates to: RQLSPGASASHT*VSSWTQRPLTL Trigger: GAGGGTCAGAGGCCTCTGTGTCCAAGAAGAAACGCATGTGTGTGAAGCTGATGCCCCTGGGGACAGCTGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR CCA 72 bp | GCACCGGCCTTGGGGCTTTGGATTTCTTGCACCAGATaGCAAAGCCACCAATGTCCCCCACACGCAGGTATC | + |
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Preference number: 3 (lower is better) Translates to: APALGLWISCTR*QSHQCPPHAGI Trigger: GATACCTGCGTGTGGGGGACATTGGTGGCTTTGCCATCTGGTGCAAGAAATCCAAAGCCCCAAGGCCGGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTTTGGATTTCTTGCACCAGATGGCAAAGCCACCAATGTCCCCCACACGCAGCACATGCGTTTCTTCTaGGACACAGAGGCCTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: GFGFLAPDGKATNVPHTQHMRFF*DTEASD Trigger: GTCAGAGGCCTCTGTGTCCAAGAAGAAACGCATGTG...CTGCGTGTGGGGGACATTGGTGGCTTTGCCATCTGGTGCAAGAAATCCAAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| 3UTR CCA 72 bp | TGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGTTaGACAGAGAGGCTGGGTGTCAATCAGCAGTATCTG | + |
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Preference number: 3 (lower is better) Translates to: CTTRQETLCASS*TERLGVNQQYL Trigger: CAGATACTGCTGATTGACACCCAGCCTCTCTGTCCAACTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CCA 90 bp | GCCCATCTGCCCATGGGGGTGCCTGAGCCTCACCTGGGCTCTTTGGGTGGGTCCGGGGAGGCGGGCAGCTaGGTCAGGCAGGGGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: AHLPMGVPEPHLGSLGGSGEAGS*VRQGRR Trigger: CCTTCTCCCCTGCCTGACCCAGCTGCCCGCCTCCCC...GGACCCACCCAAAGAGCCCAGGTGAGGCTCAGGCACCCCCATGGGCAGATGGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCCCCGAGAGCCCAGCCTaGACAGGGTCCGCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: REGHCSAQAAPAPPGKRPPESPA*TGSALG Trigger: ACCCAGAGCGGACCCTGTCCAGGCTGGGCTCTCGGG...GGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCT 69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CCA 90 bp | GGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCGGTCCTCCGTAGAGTaGAGGCCCGAGAGCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GHCSAQAAPAPPGKRPFVRSSVE*RPESPA Trigger: GGCTGGGCTCTCGGGCCTCCACTCTACGGAGGACCG...CACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| 3UTR CAA 72 bp | CTGCCCATGGGGGTGCCTGAGCCTCACCTGGGCTCTTaGGGTGGGTCCAGGGAGAGGCCTCGCATGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LPMGVPEPHLGS*GGSRERPRMSW Trigger: CCAGGACATGCGAGGCCTCTCCCTGGACCCACCCAAAGAGCCCAGGTGAGGCTCAGGCACCCCCATGGGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| CDS-3UTR GCA 90 bp | GGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCCGGGATGCCCAGCGTaGTCAGGCACAGGAAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GHCSAQAAPAPPGKRPFVPGCPA*SGTGSS Trigger: GCTACTTCCTGTGCCTGAGCACGCTGGGCATCCCGG...CACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCGGACAGGGTCCGCTCTaGGTGGCTTCCTTTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: REGHCSAQAAPAPPGKRPGQGPL*VASFAG Trigger: CCCAGCAAAGGAAGCCACCCAGAGCGGACCCTGTCC...GGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CCA 90 bp | GAGAGAAGGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCAGGGTCCGCTCTGGGTaGCTTCCTTTGCTGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ERRPLLCPGRPCTTRQETRVRSG*LPLLGS Trigger: AGAGCCCAGCAAAGGAAGCCACCCAGAGCGGACCCT...GGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGTTGGACTGCAGAGAAGCCTaGCGGCAGTGGGCCCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LPRPPLHHQARDPLCKQLDCREA*RQWALV Trigger: GACAAGGGCCCACTGCCGTCAGGCTTCTCTGCAGTC...CAACTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR GCA 90 bp | TTCTGTGAGAGAAGGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGCTGGGAGGCAGGCGTaGAGCTGCAGTCTTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FCERRPLLCPGRPCTTRQAGRQA*SCSLLH Trigger: GTGGAGAAGACTGCAGCTGCACGCCTGCCTCCCAGC...TTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCTCACAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCGGTGGCTTCCTTTGCTaGGCTCTTTGGGTGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: REGHCSAQAAPAPPGKRPGGFLC*ALWVGP Trigger: TGGACCCACCCAAAGAGCCCAGCAAAGGAAGCCACC...GGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR GCA 90 bp | GCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGCTGGGTGGCTTCCTTTaGTGGGCTCTTTGGGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ALPRPPLHHQARDPLCKQLGGFL*WALWVG Trigger: ACCCACCCAAAGAGCCCAGCAAAGGAAGCCACCCAG...CTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR GCA 90 bp | GCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGAGGCAGGCGTGCAGCTaGAGTCTTCTCCACCACGAA | + |
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Preference number: 4 (lower is better) Translates to: ALPRPPLHHQARDPLCKQRQACS*SLLHHE Trigger: TTCGTGGTGGAGAAGACTGCAGCTGCACGCCTGCCT...CTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCAGGGGACTCCGTCCATaGCTGATATGCCATAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: REGHCSAQAAPAPPGKRPRGLRP*LICHRD Trigger: GTCTCTATGGCATATCAGCCATGGACGGAGTCCCCT...GGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| 3UTR CAA 72 bp | CCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTaGTGCAAGCAGTTGGACAGAGAGGCTGGGTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: PRPPLHHQARDP*CKQLDREAGCQ Trigger: TTGACACCCAGCCTCTCTGTCCAACTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR TCA 90 bp | GGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGTGTCTGCCAGTGATTTaGTCGTCAGGTCCCCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: GHCSAQAAPAPPGKRPFVCLPVI*SSGPQK Trigger: CTTTTGGGGACCTGACGATCAAATCACTGGCAGACA...CACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR GCA 90 bp | AGAGAAGGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCGGGCTTTGGATTTCTTaGACCAGATGGCAAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: REGHCSAQAAPAPPGKRPGLWIS*TRWQSH Trigger: GTGGCTTTGCCATCTGGTGCAAGAAATCCAAAGCCC...GGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| 3UTR CAA 72 bp | CTGAGCGTGCGGGGCTTGGGCACCGGCCTTGGGGCTTaGGATTTCTTGCACCAGATGGCAAAGCCACCAATG | + |
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Preference number: 4 (lower is better) Translates to: LSVRGLGTGLGA*DFLHQMAKPPM Trigger: CATTGGTGGCTTTGCCATCTGGTGCAAGAAATCCAAAGCCCCAAGGCCGGTGCCCAAGCCCCGCACGCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| CDS-3UTR GCA 90 bp | TTGGGCACCGGCCTTGGGGCTTTGGATTTCTTGCACCAGATGGCAAAGCCACCACCGGGATGCCCAGCGTaGTCAGGCACAGGAAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LGTGLGALDFLHQMAKPPPGCPA*SGTGSS Trigger: GCTACTTCCTGTGCCTGAGCACGCTGGGCATCCCGG...TGGTGGCTTTGCCATCTGGTGCAAGAAATCCAAAGCCCCAAGGCCGGTGCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| CDS-3UTR GCA 90 bp | TCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGTTAGGGCCCACAGCTCTTaGCCTCAAATCTTGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SAQAAPAPPGKRPFVQAVRAHSS*PQILGA Trigger: TGCACCCAAGATTTGAGGGCAAGAGCTGTGGGCCCT...AACTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CCA 90 bp | TCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGTTCCGGCCTTGGGGCTTTaGATTTCTTGCACCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SAQAAPAPPGKRPFVQAVPALGL*ISCTRW Trigger: CCATCTGGTGCAAGAAATCCAAAGCCCCAAGGCCGG...AACTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR TCA 90 bp | ACGTCAGCTGTCCCCAGGGGCATCAGCTTCACACACATGCGTTTCTTCTTGGACGACTGCAGAGAAGCCTaGCGGCAGTGGGCCCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: TSAVPRGISFTHMRFFLDDCREA*RQWALV Trigger: GACAAGGGCCCACTGCCGTCAGGCTTCTCTGCAGTC...GTCCAAGAAGAAACGCATGTGTGTGAAGCTGATGCCCCTGGGGACAGCTGACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| CDS-3UTR GCA 90 bp | ACACGCAGGTATCCAGGCACGGTCTTAGTCTTCCCACTCAGCTTCACGTCACTCCCGGGATGCCCAGCGTaGTCAGGCACAGGAAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TRRYPGTVLVFPLSFTSLPGCPA*SGTGSS Trigger: GCTACTTCCTGTGCCTGAGCACGCTGGGCATCCCGG...GAGTGACGTGAAGCTGAGTGGGAAGACTAAGACCGTGCCTGGATACCTGCGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212326.2 ENSMUST00000212954.2 |
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| CDS-3UTR GCA 90 bp | GGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGTCAGCTTCACACACATaGGTTTCTTCTTGGACACAG | + |
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Preference number: 4 (lower is better) Translates to: GHCSAQAAPAPPGKRPFVSASHT*VSSWTQ Trigger: CTGTGTCCAAGAAGAAACGCATGTGTGTGAAGCTGA...CACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CCA 90 bp | TCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGTTCTTGCCCTCAAATCTTaGGTGCAGGGTAAAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: SAQAAPAPPGKRPFVQAVLALKS*VQGKGD Trigger: GTCCCCTTTACCCTGCACCCAAGATTTGAGGGCAAG...AACTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR GCA 90 bp | TCTTGCACCAGATGGCAAAGCCACCAATGTCCCCCACACGCAGGTATCCAGGCAGGGGAGGCTGAGCTATaGAGAGAACAGGGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SCTRWQSHQCPPHAGIQAGEAEL*REQGKP Trigger: TGGCTTCCCCTGTTCTCTGCATAGCTCAGCCTCCCC...TGCCTGGATACCTGCGTGTGGGGGACATTGGTGGCTTTGCCATCTGGTGCAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| CDS-3UTR CCA 90 bp | TGTGAGAGAAGGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGATATGCCATAGAGACTaGATGCCTCATAGATGGAGT | + |
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Preference number: 4 (lower is better) Translates to: CERRPLLCPGRPCTTRQEICHRD*MPHRWS Trigger: ACTCCATCTATGAGGCATCCAGTCTCTATGGCATAT...CTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR TCA 90 bp | GTGCATATGTGGCCTCTAGACACAGACTTCTGTGAGAGAAGGCCACTGCTCTGCGAGGCCTTGATATCCTaGGGGTCGTTGACTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VHMWPLDTDFCERRPLLCEALIS*GSLTAE Trigger: CTCTGCAGTCAACGACCCTCAGGATATCAAGGCCTC...GCAGAGCAGTGGCCTTCTCTCACAGAAGTCTGTGTCTAGAGGCCACATATGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CCA 90 bp | ACACGCAGGTATCCAGGCACGGTCTTAGTCTTCCCACTCAGCTTCACGTCACTCACATGCGTTTCTTCTTaGACACAGAGGCCTCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: TRRYPGTVLVFPLSFTSLTCVSS*TQRPLR Trigger: CCGGAGAGGCCTCTGTGTCCAAGAAGAAACGCATGT...GAGTGACGTGAAGCTGAGTGGGAAGACTAAGACCGTGCCTGGATACCTGCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212954.2 |
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| 3UTR CAA 72 bp | CTGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGTaGGACAGAGAGGCTGGGTGTCAATCAGCAGTATCT | + |
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Preference number: 4 (lower is better) Translates to: LHHQARDPLCKQ*DREAGCQSAVS Trigger: AGATACTGCTGATTGACACCCAGCCTCTCTGTCCAACTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR GCA 90 bp | GTGCATATGTGGCCTCTAGACACAGACTTCTGTGAGAGAAGGCCACTGCTCTGCGCCATAGAGACTGGATaGCTCATAGATGGAGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: VHMWPLDTDFCERRPLLCAIETG*LIDGVG Trigger: ACCGACTCCATCTATGAGGCATCCAGTCTCTATGGC...GCAGAGCAGTGGCCTTCTCTCACAGAAGTCTGTGTCTAGAGGCCACATATGCAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CCA 90 bp | GTGCATATGTGGCCTCTAGACACAGACTTCTGTGAGAGAAGGCCACTGCTCTGCATTTCTTGCACCAGATaGCAAAGCCACCAATGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VHMWPLDTDFCERRPLLCISCTR*QSHQCP Trigger: GGGACATTGGTGGCTTTGCCATCTGGTGCAAGAAAT...GCAGAGCAGTGGCCTTCTCTCACAGAAGTCTGTGTCTAGAGGCCACATATGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGTTGCTGAGCGTGCGGGGCTaGGGCACCGGCCTTGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LPRPPLHHQARDPLCKQLLSVRG*GTGLGA Trigger: AGCCCCAAGGCCGGTGCCCAAGCCCCGCACGCTCAG...CAACTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS CCA 90 bp | GGACAGGGTCCGCTCTGGGTGGCTTCCTTTGCTGGGCTCTTTGGGTaGGTCCAGGGAGAGGCCTCGCATGTCCTGGCTGAGCGTGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: GQGPLWVASFAGLFG*VQGEASHVLAERAG Trigger: CCCCGCACGCTCAGCCAGGACATGCGAGGCCTCTCCCTGGACCCACCCAAAGAGCCCAGCAAAGGAAGCCACCCAGAGCGGACCCTGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CAA 90 bp | GCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGCCTTTGCTGGGCTCTTaGGGTGGGTCCAGGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: ALPRPPLHHQARDPLCKQPLLGS*GGSRER Trigger: CCTCTCCCTGGACCCACCCAAAGAGCCCAGCAAAGG...CTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS CCA 90 bp | AGATGGAGTCGGTCCTCCGTAGAGTGGAGGCCCGAGAGCCCAGCCTaGACAGGGTCCGCTCTGGGTGGCTTCCTTTGCTGGGCTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: RWSRSSVEWRPESPA*TGSALGGFLCWALW Trigger: CCAAAGAGCCCAGCAAAGGAAGCCACCCAGAGCGGACCCTGTCCAGGCTGGGCTCTCGGGCCTCCACTCTACGGAGGACCGACTCCATCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGTTGTCTGGGTGGCTTCCTTaGCTGGGCTCTTTGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LPRPPLHHQARDPLCKQLSGWLP*LGSLGG Trigger: CCCACCCAAAGAGCCCAGCAAAGGAAGCCACCCAGA...CAACTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS GCA 90 bp | TGTCCACTACCACATTGTCCTGAGGGTTCTCCGGGATGCCCAGCGTaGTCAGGCACAGGAAGTAGCCGGCTTTCTGCGCGAAGCCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: CPLPHCPEGSPGCPA*SGTGSSRLSARSLG Trigger: GCCGAGGCTTCGCGCAGAAAGCCGGCTACTTCCTGTGCCTGAGCACGCTGGGCATCCCGGAGAACCCTCAGGACAATGTGGTAGTGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034272.9 ENSMUST00000212326.2 |
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| CDS-3UTR CAA 90 bp | TGTGAGAGAAGGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCGGCCTTGGGGCTTaGGATTTCTTGCACCAGATG | + |
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Preference number: 5 (lower is better) Translates to: CERRPLLCPGRPCTTRQETGLGA*DFLHQM Trigger: CATCTGGTGCAAGAAATCCAAAGCCCCAAGGCCGGT...CTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCCTTCTCTCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGCAAGCAGTTGAAGGGCCCACAGCTCTaGCCCTCAAATCTTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: LPRPPLHHQARDPLCKQLKGPQL*PSNLGC Trigger: GCACCCAAGATTTGAGGGCAAGAGCTGTGGGCCCTT...CAACTGCTTGCACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS GCA 90 bp | CGATCTGCATGTCCACTACCACATTGTCCTGAGGGTTCTCCGGGATaGCCAGCGTGCTCAGGCACAGGAAGTAGCCGGCTTTCTGCGCGA | + |
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Preference number: 5 (lower is better) Translates to: RSACPLPHCPEGSPG*PACSGTGSSRLSAR Trigger: TCGCGCAGAAAGCCGGCTACTTCCTGTGCCTGAGCACGCTGGGCATCCCGGAGAACCCTCAGGACAATGTGGTAGTGGACATGCAGATCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034272.9 ENSMUST00000212326.2 |
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| CDS CCA 90 bp | CTCCGTCCATGGCTGATATGCCATAGAGACTGGATGCCTCATAGATaGAGTCGGTCCTCCGTAGAGTGGAGGCCCGAGAGCCCAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LRPWLICHRDWMPHR*SRSSVEWRPESPAW Trigger: CCAGGCTGGGCTCTCGGGCCTCCACTCTACGGAGGACCGACTCCATCTATGAGGCATCCAGTCTCTATGGCATATCAGCCATGGACGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CAA 90 bp | GGCCACTGCTCTGCCCAGGCCGCCCCTGCACCACCAGGCAAGAGACCCTTTGTGATGTCTGCCAGTGATTaGATCGTCAGGTCCCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: GHCSAQAAPAPPGKRPFVMSASD*IVRSPK Trigger: TTTTGGGGACCTGACGATCAAATCACTGGCAGACAT...CACAAAGGGTCTCTTGCCTGGTGGTGCAGGGGCGGCCTGGGCAGAGCAGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS-3UTR CAA 90 bp | CCAGATGGCAAAGCCACCAATGTCCCCCACACGCAGGTATCCAGGCACGGTCTTCACATGCGTTTCTTCTaGGACACAGAGGCCTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: PDGKATNVPHTQVSRHGLHMRFF*DTEASP Trigger: CGGAGAGGCCTCTGTGTCCAAGAAGAAACGCATGTG...AAGACCGTGCCTGGATACCTGCGTGTGGGGGACATTGGTGGCTTTGCCATCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212954.2 |
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| CDS-3UTR CAA 90 bp | GTGCATATGTGGCCTCTAGACACAGACTTCTGTGAGAGAAGGCCACTGCTCTGCGGGGCTTTGGATTTCTaGCACCAGATGGCAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: VHMWPLDTDFCERRPLLCGALDF*HQMAKP Trigger: TGGCTTTGCCATCTGGTGCAAGAAATCCAAAGCCCC...GCAGAGCAGTGGCCTTCTCTCACAGAAGTCTGTGTCTAGAGGCCACATATGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS TCA 90 bp | CCACGAAGCCATAGTTATACTCCTTCTCAATGTCTGCCAGTGATTTaGTCGTCAGGTCCCCAAAAGCAGACAAGTTCAAGGGCCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: PRSHSYTPSQCLPVI*SSGPQKQTSSRAHS Trigger: GCTGTGGGCCCTTGAACTTGTCTGCTTTTGGGGACCTGACGATCAAATCACTGGCAGACATTGAGAAGGAGTATAACTATGGCTTCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS CCA 72 bp | GCCCGAGAGCCCAGCCTGGACAGGGTCCGCTCTGGGTaGCTTCCTTTGCTGGGCTCTTTGGGTGGGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AREPSLDRVRSG*LPLLGSLGGSR Trigger: CCTGGACCCACCCAAAGAGCCCAGCAAAGGAAGCCACCCAGAGCGGACCCTGTCCAGGCTGGGCTCTCGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS CCA 72 bp | GGAGGCCCGAGAGCCCAGCCTGGACAGGGTCCGCTCTaGGTGGCTTCCTTTGCTGGGCTCTTTGGGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: GGPRAQPGQGPL*VASFAGLFGWV Trigger: GACCCACCCAAAGAGCCCAGCAAAGGAAGCCACCCAGAGCGGACCCTGTCCAGGCTGGGCTCTCGGGCCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS CCA 72 bp | GGGTCCGCTCTGGGTGGCTTCCTTTGCTGGGCTCTTTaGGTGGGTCCAGGGAGAGGCCTCGCATGTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GSALGGFLCWAL*VGPGRGLACPG Trigger: GCCAGGACATGCGAGGCCTCTCCCTGGACCCACCCAAAGAGCCCAGCAAAGGAAGCCACCCAGAGCGGACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS CAA 72 bp | AGGGTCCGCTCTGGGTGGCTTCCTTTGCTGGGCTCTTaGGGTGGGTCCAGGGAGAGGCCTCGCATGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RVRSGWLPLLGS*GGSRERPRMSW Trigger: CCAGGACATGCGAGGCCTCTCCCTGGACCCACCCAAAGAGCCCAGCAAAGGAAGCCACCCAGAGCGGACCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS GCA 72 bp | CCACATTGTCCTGAGGGTTCTCCGGGATGCCCAGCGTaGTCAGGCACAGGAAGTAGCCGGCTTTCTGCGCGA | + |
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Preference number: 6 (lower is better) Translates to: PHCPEGSPGCPA*SGTGSSRLSAR Trigger: TCGCGCAGAAAGCCGGCTACTTCCTGTGCCTGAGCACGCTGGGCATCCCGGAGAACCCTCAGGACAATGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034272.9 ENSMUST00000212326.2 |
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| CDS GCA 72 bp | TGTCCACTACCACATTGTCCTGAGGGTTCTCCGGGATaGCCAGCGTGCTCAGGCACAGGAAGTAGCCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: CPLPHCPEGSPG*PACSGTGSSRL Trigger: AAGCCGGCTACTTCCTGTGCCTGAGCACGCTGGGCATCCCGGAGAACCCTCAGGACAATGTGGTAGTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034272.9 ENSMUST00000212326.2 |
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| CDS GCA 72 bp | ATGCGTTTCTTCTTGGACACAGAGGCCTCTCCGGGATaGCCAGCGTGCTCAGGCACAGGAAGTAGCCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: MRFFLDTEASPG*PACSGTGSSRL Trigger: AAGCCGGCTACTTCCTGTGCCTGAGCACGCTGGGCATCCCGGAGAGGCCTCTGTGTCCAAGAAGAAACGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212954.2 |
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| CDS TCA 72 bp | GTTCCAGGTGGACTCGCAGTGCAAGAGCTGATATCCTaGGGGTCGTTGACTGCAGAGAAGCCTGACGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: VPGGLAVQELIS*GSLTAEKPDGS Trigger: ACTGCCGTCAGGCTTCTCTGCAGTCAACGACCCTCAGGATATCAGCTCTTGCACTGCGAGTCCACCTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212326.2 |
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| CDS CCA 72 bp | TGGCTGATATGCCATAGAGACTGGATGCCTCATAGATaGAGTCGGTCCTCCGTAGAGTGGAGGCCCGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: WLICHRDWMPHR*SRSSVEWRPES Trigger: GCTCTCGGGCCTCCACTCTACGGAGGACCGACTCCATCTATGAGGCATCCAGTCTCTATGGCATATCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS CCA 72 bp | AGGGGACTCCGTCCATGGCTGATATGCCATAGAGACTaGATGCCTCATAGATGGAGTCGGTCCTCCGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: RGLRPWLICHRD*MPHRWSRSSVE Trigger: CTCTACGGAGGACCGACTCCATCTATGAGGCATCCAGTCTCTATGGCATATCAGCCATGGACGGAGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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| CDS TCA 72 bp | CATAGTTATACTCCTTCTCAATGTCTGCCAGTGATTTaGTCGTCAGGTCCCCAAAAGCAGACAAGTTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: HSYTPSQCLPVI*SSGPQKQTSSR Trigger: CCTTGAACTTGTCTGCTTTTGGGGACCTGACGATCAAATCACTGGCAGACATTGAGAAGGAGTATAACTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034272.9 |
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