Pregenerated sensors for MUTYH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028687Ensembl transcript IDs: ENSMUST00000102699.8, ENSMUST00000130359.8, ENSMUST00000155346.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCTTTGCACCAGGAGGACCAGGGGACCCCCGATGGCTCCGGGCTaGTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: GLCTRRTRGPPMAPG*STTQVAEYSSLGGL Trigger: CAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGAGCCATCGGGGGTCCCCTGGTCCTCCTGGTGCAAAGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 90 bp | GACCTGAGTCAGGCCTTTGCACCAGGAGGACCAGGGGACCCCCGATaGCTCCGGGCTGCTCCACAACACAGGTGGCAGAGTACTCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: DLSQAFAPGGPGDPR*LRAAPQHRWQSTPP Trigger: GGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGAGCCATCGGGGGTCCCCTGGTCCTCCTGGTGCAAAGGCCTGACTCAGGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 90 bp | CCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGCGGCTaGCCTTTCGAGGAAAGTTGGCCACTCCCATGCTGGGGTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PQHRWQSTPPWEACG*PFEESWPLPCWGPR Trigger: CCTGGGACCCCAGCATGGGAGTGGCCAACTTTCCTCGAAAGGCCAGCCGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 90 bp | TGGCTCCGGGCTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTaGGAGGCCTGCGGCTGGCCTTTCGAGGAAAGTTGGCCACTCCCA | + |
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Preference number: 1 (lower is better) Translates to: WLRAAPQHRWQSTPP*EACGWPFEESWPLP Trigger: TGGGAGTGGCCAACTTTCCTCGAAAGGCCAGCCGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR TCA 90 bp | CTCCAAGGTGACAGATGGGAACTCCCACAGTCCTGCCAGCAGACCTaGGTCAGGCCTTTGCACCAGGAGGACCAGGGGACCCCCGATGGC | + |
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Preference number: 1 (lower is better) Translates to: LQGDRWELPQSCQQT*VRPLHQEDQGTPDG Trigger: GCCATCGGGGGTCCCCTGGTCCTCCTGGTGCAAAGGCCTGACTCAGGTCTGCTGGCAGGACTGTGGGAGTTCCCATCTGTCACCTTGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR GCA 90 bp | GCTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTaGGGCTGGCCTTTCGAGGAAAGTTGGCCACTCCCATGCTGGGGT | + |
|
Preference number: 1 (lower is better) Translates to: AAPQHRWQSTPPWEA*GWPFEESWPLPCWG Trigger: ACCCCAGCATGGGAGTGGCCAACTTTCCTCGAAAGGCCAGCCGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR GCA 90 bp | GAAGCAATGGCTCCAGCCGTGTACCGCCCCACACCAGGCAGGAGCTaGTGTAGGGTCTCTGCTGTACGTGGCATATGGCCTCCTAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: EAMAPAVYRPTPGRS*CRVSAVRGIWPPSS Trigger: GGAGCTAGGAGGCCATATGCCACGTACAGCAGAGACCCTACAGCAGCTCCTGCCTGGTGTGGGGCGGTACACGGCTGGAGCCATTGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 90 bp | TCCCATCCACCACACCGGTTACCTGGTCAAAGGCGATGGAAGCAATaGCTCCAGCCGTGTACCGCCCCACACCAGGCAGGAGCTGCTGTA | + |
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Preference number: 1 (lower is better) Translates to: SHPPHRLPGQRRWKQ*LQPCTAPHQAGAAV Trigger: TACAGCAGCTCCTGCCTGGTGTGGGGCGGTACACGGCTGGAGCCATTGCTTCCATCGCCTTTGACCAGGTAACCGGTGTGGTGGATGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 90 bp | CGGCACAGCACCCGTAAAACGTTCCCATCCACCACACCGGTTACCTaGTCAAAGGCGATGGAAGCAATGGCTCCAGCCGTGTACCGCCCC | + |
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Preference number: 1 (lower is better) Translates to: RHSTRKTFPSTTPVT*SKAMEAMAPAVYRP Trigger: GGGGCGGTACACGGCTGGAGCCATTGCTTCCATCGCCTTTGACCAGGTAACCGGTGTGGTGGATGGGAACGTTTTACGGGTGCTGTGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 90 bp | TCCAGAGGTGATGAGAGACAAGGGTGCTGGTGGGATCGGCACCAATaGCCCGGACACGGCACAGCACCCGTAAAACGTTCCCATCCACCA | + |
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Preference number: 1 (lower is better) Translates to: SRGDERQGCWWDRHQ*PGHGTAPVKRSHPP Trigger: TGGTGGATGGGAACGTTTTACGGGTGCTGTGCCGTGTCCGGGCCATTGGTGCCGATCCCACCAGCACCCTTGTCTCTCATCACCTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 90 bp | ACTCCCATGCTGGGGTCCCAGGGGCTTGAGGAAGTGAGGCAAAGCTaGCACTGTCTAGTGTTGAGAGCACACTCCTCTATGTCAGGACGG | + |
|
Preference number: 1 (lower is better) Translates to: TPMLGSQGLEEVRQS*HCLVLRAHSSMSGR Trigger: CCGTCCTGACATAGAGGAGTGTGCTCTCAACACTAGACAGTGCCAGCTTTGCCTCACTTCCTCAAGCCCCTGGGACCCCAGCATGGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR GCA 90 bp | TGCAGAATTCCTCCCAGGTCAGCCATCGAGCGCCAGGAGGTGCAGTaGTCGCTGGGGCTTGATCTAGAGCCAGACTATATACTTGATACG | + |
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Preference number: 1 (lower is better) Translates to: CRIPPRSAIERQEVQ*SLGLDLEPDYILDT Trigger: CGTATCAAGTATATAGTCTGGCTCTAGATCAAGCCCCAGCGAGCACTGCACCTCCTGGCGCTCGATGGCTGACCTGGGAGGAATTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR GCA 90 bp | GATGGAGGACACACCTGGGACCTTTTTGAACCCTTGCGGGTCCCTTaGCGATGGTCCTCATACATGCGGAACACCTTTTTCATGGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: DGGHTWDLFEPLRVP*RWSSYMRNTFFMAV Trigger: TACTGCCATGAAAAAGGTGTTCCGCATGTATGAGGACCATCGGCAAGGGACCCGCAAGGGTTCAAAAAGGTCCCAGGTGTGTCCTCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 90 bp | GGACACACCTGGGACCTTTTTGAACCCTTGCGGGTCCCTTGCCGATaGTCCTCATACATGCGGAACACCTTTTTCATGGCAGTAGACACA | + |
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Preference number: 1 (lower is better) Translates to: GHTWDLFEPLRVPCR*SSYMRNTFFMAVDT Trigger: TGTGTCTACTGCCATGAAAAAGGTGTTCCGCATGTATGAGGACCATCGGCAAGGGACCCGCAAGGGTTCAAAAAGGTCCCAGGTGTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGCGGCTGGCGTCCCCAGGCCGGGCTaGGTCCACGAGCTGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LLHNTGGRVLLPGRPAAGVPRPG*VHELLG Trigger: GCCCAGCAGCTCGTGGACCCAGCCCGGCCTGGGGAC...GCCAGCCGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGGGCTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGCGGCAGAGAGGGCGCTGTaGGGTGCACACTGTAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SGLLHNTGGRVLLPGRPAAERAL*GAHCSP Trigger: GGGGCTACAGTGTGCACCCCACAGCGCCCTCTCTGC...CGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCGGGCTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGTGGCCACTCCCATGCTaGGGTCCCAGGGGCTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: APGCSTTQVAEYSSLGGLWPLPC*GPRGLR Trigger: CCTCAAGCCCCTGGGACCCCAGCATGGGAGTGGCCA...CAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGCGGCTGGCAGGCGATGGAAGCAATaGCTCCAGCCGTGTACCGCC | + |
|
Preference number: 2 (lower is better) Translates to: LLHNTGGRVLLPGRPAAGRRWKQ*LQPCTA Trigger: GGCGGTACACGGCTGGAGCCATTGCTTCCATCGCCT...GCCAGCCGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCCCGATGGCTCCGGGCTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTTGGGATCGGCACCAATaGCCCGGACACGGCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: TPDGSGLLHNTGGRVLLPWDRHQ*PGHGTA Trigger: TGCTGTGCCGTGTCCGGGCCATTGGTGCCGATCCCA...AGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGAGCCATCGGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCGGCTGGCCTTTCGAGGAAAGTTGGCCACTCCCATGCTGGGGTCCCAGGGGAGACAAGGGTGCTGGTaGGATCGGCACCAATGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LRLAFRGKLATPMLGSQGRQGCW*DRHQWP Trigger: GGGCCATTGGTGCCGATCCCACCAGCACCCTTGTCT...CCCCTGGGACCCCAGCATGGGAGTGGCCAACTTTCCTCGAAAGGCCAGCCGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR GCA 90 bp | TCCGGGCTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGCGACACCAGGCAGGAGCTaGTGTAGGGTCTCTGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SGLLHNTGGRVLLPGRPATPGRS*CRVSAV Trigger: TACAGCAGAGACCCTACAGCAGCTCCTGCCTGGTGT...CGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR TCA 90 bp | AGCGCTGCAGTTCCTGCAGAAGGGCTTTGTGCTGATGCTGTTCTGAGGGCTCCAGGGGTCCCAGGGGCTTaGGGAAGTGAGGCAAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SAAVPAEGLCADAVLRAPGVPGA*GSEAKL Trigger: CAGCTTTGCCTCACTTCCTCAAGCCCCTGGGACCCC...TGGAGCCCTCAGAACAGCATCAGCACAAAGCCCTTCTGCAGGAACTGCAGCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTGGATAACCTCCCCAAGGTGCTGGAGACGAATGGCAGGGAGGGGCCCACACCTGAGGGCTCCAAGGTaGCAGATGGGAACTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: MWITSPRCWRRMAGRGPHLRAPR*QMGTPT Trigger: TGTGGGAGTTCCCATCTGTCACCTTGGAGCCCTCAG...GTGTGGGCCCCTCCCTGCCATTCGTCTCCAGCACCTTGGGGAGGTTATCCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR GCA 90 bp | TGGATAACCTCCCCAAGGTGCTGGAGACGAATGGCAGGGAGGGGCCCACACCAGGATGAGAGACAAGGGTaGTGGTGGGATCGGCACCAA | + |
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Preference number: 2 (lower is better) Translates to: WITSPRCWRRMAGRGPHQDERQG*WWDRHQ Trigger: TTGGTGCCGATCCCACCAGCACCCTTGTCTCTCATC...CTGGTGTGGGCCCCTCCCTGCCATTCGTCTCCAGCACCTTGGGGAGGTTATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR CCA 90 bp | CATTGCAGAATTCCTCCCAGGTCAGCCATCGAGCGCCAGGAGGTGCAGTGCTCGCCTGGTCAAAGGCGATaGAAGCAATGGCTCCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: HCRIPPRSAIERQEVQCSPGQRR*KQWLQP Trigger: CGGCTGGAGCCATTGCTTCCATCGCCTTTGACCAGG...CGAGCACTGCACCTCCTGGCGCTCGATGGCTGACCTGGGAGGAATTCTGCAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CAA 90 bp | TCCCAGGGGCTTGAGGAAGTGAGGCAAAGCTGGCACTGTCTAGTGTaGAGAGCACACTCCTCTATGTCAGGACGGCCTGGCAAGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SQGLEEVRQSWHCLV*RAHSSMSGRPGKAE Trigger: CTCAGCCTTGCCAGGCCGTCCTGACATAGAGGAGTGTGCTCTCAACACTAGACAGTGCCAGCTTTGCCTCACTTCCTCAAGCCCCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CAA 90 bp | TCATACATGCGGAACACCTTTTTCATGGCAGTAGACACAGCTGCATaGCAGAATTCCTCCCAGGTCAGCCATCGAGCGCCAGGAGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SYMRNTFFMAVDTAA*QNSSQVSHRAPGGA Trigger: TGCACCTCCTGGCGCTCGATGGCTGACCTGGGAGGAATTCTGCAATGCAGCTGTGTCTACTGCCATGAAAAAGGTGTTCCGCATGTATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CAA 90 bp | TTTTTCCTGCTTGATGGAGGACACACCTGGGACCTTTTTGAACCCTaGCGGGTCCCTTGCCGATGGTCCTCATACATGCGGAACACCTTT | + |
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Preference number: 2 (lower is better) Translates to: FFLLDGGHTWDLFEP*RVPCRWSSYMRNTF Trigger: AAAGGTGTTCCGCATGTATGAGGACCATCGGCAAGGGACCCGCAAGGGTTCAAAAAGGTCCCAGGTGTGTCCTCCATCAAGCAGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGGTTTGTCTGTGGGGATATGACGCTGAAAGAAAGTATCCAGGACTTGCTAGGGGCTTGAGGAAGTaGGGCAAAGCTGGCACTGTC | + |
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Preference number: 2 (lower is better) Translates to: CWVCLWGYDAERKYPGLARGLRK*GKAGTV Trigger: GACAGTGCCAGCTTTGCCTCACTTCCTCAAGCCCCT...AGCAAGTCCTGGATACTTTCTTTCAGCGTCATATCCCCACAGACAAACCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR TCA 90 bp | ATACATGCGGAACACCTTTTTCATGGCAGTAGACACAGCTGCATTGCAGAATTCGTGCTGATGCTGTTCTaGGGGCTCCAAGGTGACAGA | + |
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Preference number: 2 (lower is better) Translates to: IHAEHLFHGSRHSCIAEFVLMLF*GLQGDR Trigger: TCTGTCACCTTGGAGCCCTCAGAACAGCATCAGCAC...GAATTCTGCAATGCAGCTGTGTCTACTGCCATGAAAAAGGTGTTCCGCATGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCATGGCAGTAGACACAGCTGCATTGCAGAATTCCTCCCAGGTCAGCCATTACGTCAGTTTGATGTaGGAGAAGATGTGGATAACC | + |
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Preference number: 2 (lower is better) Translates to: FFMAVDTAALQNSSQVSHYVSLM*EKMWIT Trigger: GGTTATCCACATCTTCTCTCACATCAAACTGACGTA...ATGGCTGACCTGGGAGGAATTCTGCAATGCAGCTGTGTCTACTGCCATGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 72 bp | GACCCCCGATGGCTCCGGGCTGCTCCACAACACAGGTaGCAGAGTACTCCTCCCTGGGAGGCCTGCGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: DPRWLRAAPQHR*QSTPPWEACGW Trigger: CCAGCCGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGAGCCATCGGGGGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR GCA 72 bp | ACCAGGAGGACCAGGGGACCCCCGATGGCTCCGGGCTaGTCCACAACACAGGTGGCAGAGTACTCCTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: TRRTRGPPMAPG*STTQVAEYSSL Trigger: CAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGAGCCATCGGGGGTCCCCTGGTCCTCCTGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 72 bp | CAGGCCTTTGCACCAGGAGGACCAGGGGACCCCCGATaGCTCCGGGCTGCTCCACAACACAGGTGGCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: QAFAPGGPGDPR*LRAAPQHRWQS Trigger: ACTCTGCCACCTGTGTTGTGGAGCAGCCCGGAGCCATCGGGGGTCCCCTGGTCCTCCTGGTGCAAAGGCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR TCA 72 bp | AGCACACTCCTCTATGTCAGGACGGCCTGGCAAGGCTaGGAGCTGACCCCGCTGCACCCTCTGGTATGCCCG | + |
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Preference number: 3 (lower is better) Translates to: STLLYVRTAWQG*ELTPLHPLVCP Trigger: CGGGCATACCAGAGGGTGCAGCGGGGTCAGCTCTCAGCCTTGCCAGGCCGTCCTGACATAGAGGAGTGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR GCA 72 bp | GCTCCAGCCGTGTACCGCCCCACACCAGGCAGGAGCTaGTGTAGGGTCTCTGCTGTACGTGGCATATGGCCT | + |
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Preference number: 3 (lower is better) Translates to: APAVYRPTPGRS*CRVSAVRGIWP Trigger: AGGCCATATGCCACGTACAGCAGAGACCCTACAGCAGCTCCTGCCTGGTGTGGGGCGGTACACGGCTGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 72 bp | AGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGCGGCTaGCCTTTCGAGGAAAGTTGGCCACTCCCATGCTGG | + |
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Preference number: 3 (lower is better) Translates to: RWQSTPPWEACG*PFEESWPLPCW Trigger: CCAGCATGGGAGTGGCCAACTTTCCTCGAAAGGCCAGCCGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR TCA 72 bp | GACAGATGGGAACTCCCACAGTCCTGCCAGCAGACCTaGGTCAGGCCTTTGCACCAGGAGGACCAGGGGACC | + |
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Preference number: 3 (lower is better) Translates to: DRWELPQSCQQT*VRPLHQEDQGT Trigger: GGTCCCCTGGTCCTCCTGGTGCAAAGGCCTGACTCAGGTCTGCTGGCAGGACTGTGGGAGTTCCCATCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 72 bp | GCTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTaGGAGGCCTGCGGCTGGCCTTTCGAGGAAAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: AAPQHRWQSTPP*EACGWPFEESW Trigger: CCAACTTTCCTCGAAAGGCCAGCCGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 72 bp | TCCCATCCACCACACCGGTTACCTGGTCAAAGGCGATaGAAGCAATGGCTCCAGCCGTGTACCGCCCCACAC | + |
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Preference number: 3 (lower is better) Translates to: SHPPHRLPGQRR*KQWLQPCTAPH Trigger: GTGTGGGGCGGTACACGGCTGGAGCCATTGCTTCCATCGCCTTTGACCAGGTAACCGGTGTGGTGGATGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 72 bp | GATGAGAGACAAGGGTGCTGGTGGGATCGGCACCAATaGCCCGGACACGGCACAGCACCCGTAAAACGTTCC | + |
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Preference number: 3 (lower is better) Translates to: DERQGCWWDRHQ*PGHGTAPVKRS Trigger: GGAACGTTTTACGGGTGCTGTGCCGTGTCCGGGCCATTGGTGCCGATCCCACCAGCACCCTTGTCTCTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 72 bp | GGGCTAAGTTCCAGAGGTGATGAGAGACAAGGGTGCTaGTGGGATCGGCACCAATGGCCCGGACACGGCACA | + |
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Preference number: 3 (lower is better) Translates to: GLSSRGDERQGC*WDRHQWPGHGT Trigger: TGTGCCGTGTCCGGGCCATTGGTGCCGATCCCACCAGCACCCTTGTCTCTCATCACCTCTGGAACTTAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR GCA 72 bp | CCTCCCAGGTCAGCCATCGAGCGCCAGGAGGTGCAGTaGTCGCTGGGGCTTGATCTAGAGCCAGACTATATA | + |
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Preference number: 3 (lower is better) Translates to: PPRSAIERQEVQ*SLGLDLEPDYI Trigger: TATATAGTCTGGCTCTAGATCAAGCCCCAGCGAGCACTGCACCTCCTGGCGCTCGATGGCTGACCTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 72 bp | CTAAGTTCCAGAGGTGATGAGAGACAAGGGTGCTGGTaGGATCGGCACCAATGGCCCGGACACGGCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: LSSRGDERQGCW*DRHQWPGHGTA Trigger: TGCTGTGCCGTGTCCGGGCCATTGGTGCCGATCCCACCAGCACCCTTGTCTCTCATCACCTCTGGAACTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CCA 72 bp | ACCCGTAAAACGTTCCCATCCACCACACCGGTTACCTaGTCAAAGGCGATGGAAGCAATGGCTCCAGCCGTG | + |
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Preference number: 3 (lower is better) Translates to: TRKTFPSTTPVT*SKAMEAMAPAV Trigger: CACGGCTGGAGCCATTGCTTCCATCGCCTTTGACCAGGTAACCGGTGTGGTGGATGGGAACGTTTTACGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR TCA 72 bp | CAGTTCCTGCAGAAGGGCTTTGTGCTGATGCTGTTCTaGGGGCTCCAAGGTGACAGATGGGAACTCCCACAG | + |
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Preference number: 3 (lower is better) Translates to: QFLQKGFVLMLF*GLQGDRWELPQ Trigger: CTGTGGGAGTTCCCATCTGTCACCTTGGAGCCCTCAGAACAGCATCAGCACAAAGCCCTTCTGCAGGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR GCA 72 bp | TTGATGGAGGACACACCTGGGACCTTTTTGAACCCTTaGGGGTCCCTTGCCGATGGTCCTCATACATGCGGA | + |
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Preference number: 3 (lower is better) Translates to: LMEDTPGTFLNP*GSLADGPHTCG Trigger: TCCGCATGTATGAGGACCATCGGCAAGGGACCCGCAAGGGTTCAAAAAGGTCCCAGGTGTGTCCTCCATCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR GCA 72 bp | CACACCTGGGACCTTTTTGAACCCTTGCGGGTCCCTTaGCGATGGTCCTCATACATGCGGAACACCTTTTTC | + |
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Preference number: 3 (lower is better) Translates to: HTWDLFEPLRVP*RWSSYMRNTFF Trigger: GAAAAAGGTGTTCCGCATGTATGAGGACCATCGGCAAGGGACCCGCAAGGGTTCAAAAAGGTCCCAGGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR CCA 90 bp | CTGCGGCTGGCCTTTCGAGGAAAGTTGGCCACTCCCATGCTGGGGTCCCAGGGGCCTCCAGGGAAGCGCTaGCCAGGTCTTGAAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLAFRGKLATPMLGSQGPPGKR*PGLEAL Trigger: CAAAGCTTCAAGACCTGGCCAGCGCTTCCCTGGAGG...CCCCTGGGACCCCAGCATGGGAGTGGCCAACTTTCCTCGAAAGGCCAGCCGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR CCA 90 bp | AGAGGTGATGAGAGACAAGGGTGCTGGTGGGATCGGCACCAATGGCCCGGACACCCTCTCTCTTCTGCTTaGCCAGGCCATCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGDERQGCWWDRHQWPGHPLSSA*PGHPGW Trigger: CCAGCCTGGATGGCCTGGCCAAGCAGAAGAGAGAGG...GTGTCCGGGCCATTGGTGCCGATCCCACCAGCACCCTTGTCTCTCATCACCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR CCA 90 bp | GCTCCGGGCTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGCCCTCCTGTCCGAGTTaGCCTCTTCTTTTGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: APGCSTTQVAEYSSLGGLPSCPS*PLLLPS Trigger: ACTTGGCAAAAGAAGAGGCCAACTCGGACAGGAGGG...CAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR CCA 90 bp | CTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGCGGCTGGCCAGGTCTTGAAGCTTTaGCCACTTCAGCATAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLHNTGGRVLLPGRPAAGQVLKL*PLQHRP Trigger: GGGCCTATGCTGAAGTGGCCAAAGCTTCAAGACCTG...GCCAGCCGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR GCA 90 bp | CTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGCGGCTGGCGTTGGCCTCTTCTTTTaGCAAGTTTCTCCAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLHNTGGRVLLPGRPAAGVGLFF*QVSPRE Trigger: CTCCCTTGGAGAAACTTGGCAAAAGAAGAGGCCAAC...GCCAGCCGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR CCA 90 bp | TGGATAACCTCCCCAAGGTGCTGGAGACGAATGGCAGGGAGGGGCCCACACCAGGCTGAAGAGATGATATaGGGAGACAGAGGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WITSPRCWRRMAGRGPHQAEEMI*GDRGLQ Trigger: CTGCAGGCCTCTGTCTCCCCATATCATCTCTTCAGC...CTGGTGTGGGCCCCTCCCTGCCATTCGTCTCCAGCACCTTGGGGAGGTTATCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CAA 72 bp | CTTGATGGAGGACACACCTGGGACCTTTTTGAACCCTaGCGGGTCCCTTGCCGATGGTCCTCATACATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LDGGHTWDLFEP*RVPCRWSSYMR Trigger: CCGCATGTATGAGGACCATCGGCAAGGGACCCGCAAGGGTTCAAAAAGGTCCCAGGTGTGTCCTCCATCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CAA 72 bp | CTTGAGGAAGTGAGGCAAAGCTGGCACTGTCTAGTGTaGAGAGCACACTCCTCTATGTCAGGACGGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LEEVRQSWHCLV*RAHSSMSGRPG Trigger: GCCAGGCCGTCCTGACATAGAGGAGTGTGCTCTCAACACTAGACAGTGCCAGCTTTGCCTCACTTCCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR CCA 90 bp | GTTCCAGAGGTGATGAGAGACAAGGGTGCTGGTGGGATCGGCACCAATGGCCCGTCCTTCTCTTGTGGTTaGCTGGTTGCTTTTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPEVMRDKGAGGIGTNGPSFSCG*LVAFCD Trigger: GTCACAAAAAGCAACCAGCCAACCACAAGAGAAGGA...CGGGCCATTGGTGCCGATCCCACCAGCACCCTTGTCTCTCATCACCTCTGGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CAA 72 bp | CGGAACACCTTTTTCATGGCAGTAGACACAGCTGCATaGCAGAATTCCTCCCAGGTCAGCCATCGAGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RNTFFMAVDTAA*QNSSQVSHRAP Trigger: TGGCGCTCGATGGCTGACCTGGGAGGAATTCTGCAATGCAGCTGTGTCTACTGCCATGAAAAAGGTGTTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| 3UTR CAA 72 bp | TTTTCCTGCTTGATGGAGGACACACCTGGGACCTTTTaGAACCCTTGCGGGTCCCTTGCCGATGGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSCLMEDTPGTF*NPCGSLADGPH Trigger: ATGAGGACCATCGGCAAGGGACCCGCAAGGGTTCAAAAAGGTCCCAGGTGTGTCCTCCATCAAGCAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR CCA 90 bp | AGCGCTGCAGTTCCTGCAGAAGGGCTTTGTGCTGATGCTGTTCTGAGGGCTCCATCTCTTGTGGTTGGCTaGTTGCTTTTTGTGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAAVPAEGLCADAVLRAPSLVVG*LLFVTP Trigger: AGGAGTCACAAAAAGCAACCAGCCAACCACAAGAGA...TGGAGCCCTCAGAACAGCATCAGCACAAAGCCCTTCTGCAGGAACTGCAGCGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR CCA 90 bp | TGTTGGGTTTGTCTGTGGGGATATGACGCTGAAAGAAAGTATCCAGGACTTGCTAGGCCAGACCAGAGCTaGTTCACCTCCTCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CWVCLWGYDAERKYPGLARPDQS*FTSSRE Trigger: TTCCCTGGAGGAGGTGAACCAGCTCTGGTCTGGCCT...AGCAAGTCCTGGATACTTTCTTTCAGCGTCATATCCCCACAGACAAACCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR TCA 90 bp | TGTTGGGTTTGTCTGTGGGGATATGACGCTGAAAGAAAGTATCCAGGACTTGCTGCTGGTTGCTTTTTGTaGCTCCTCACAGATGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CWVCLWGYDAERKYPGLAAGCFL*LLTDAW Trigger: CCAAGCATCTGTGAGGAGTCACAAAAAGCAACCAGC...AGCAAGTCCTGGATACTTTCTTTCAGCGTCATATCCCCACAGACAAACCCAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
||
| CDS-3UTR CAA 90 bp | GCTCCGGGCTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGAGCGCTGGCCAGGTCTaGAAGCTTTGGCCACTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: APGCSTTQVAEYSSLGGLSAGQV*KLWPLQ Trigger: CTGAAGTGGCCAAAGCTTCAAGACCTGGCCAGCGCT...CAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGCAGACCTGAGTCAGGCCTTTGCACCAGGAGGACCAGGGGACCCCCGATGTACCAGCTGAGCAAGTaGCTTCGGAAAGCTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ASRPESGLCTRRTRGPPMYQLSK*LRKAVT Trigger: TGTCACAGCTTTCCGAAGCAACTTGCTCAGCTGGTA...CATCGGGGGTCCCCTGGTCCTCCTGGTGCAAAGGCCTGACTCAGGTCTGCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS CCA 90 bp | TCTCTCTTCTGCTTGGCCAGGCCATCCAGGCTGGAAGGCTTGGCCTaGCTGCTGCTAAGGGCACGTGTTCTCCTTCTCTTGTGGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLFCLARPSRLEGLA*LLLRARVLLLLWLA Trigger: AGCCAACCACAAGAGAAGGAGAACACGTGCCCTTAGCAGCAGCCAGGCCAAGCCTTCCAGCCTGGATGGCCTGGCCAAGCAGAAGAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102699.8 ENSMUST00000130359.8 ENSMUST00000155346.8 |
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| CDS CCA 90 bp | CTGGTTCACCTCCTCCAGGGAAGCGCTGGCCAGGTCTTGAAGCTTTaGCCACTTCAGCATAGGCCCTCCTGTCCGAGTTGGCCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVHLLQGSAGQVLKL*PLQHRPSCPSWPLL Trigger: AAGAAGAGGCCAACTCGGACAGGAGGGCCTATGCTGAAGTGGCCAAAGCTTCAAGACCTGGCCAGCGCTTCCCTGGAGGAGGTGAACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR CAA 90 bp | TCCGGGCTGCTCCACAACACAGGTGGCAGAGTACTCCTCCCTGGGAGGCCTGCGAGTTGGCCTCTTCTTTaGCCAAGTTTCTCCAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGLLHNTGGRVLLPGRPASWPLL*PSFSKG Trigger: TCCCTTGGAGAAACTTGGCAAAAGAAGAGGCCAACT...CGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS TCA 90 bp | ATAGTCGATCACTGTGGCAACCTGGGTCTGCTGCAGCATAACCTCTaGCACCCACACAGCATAGGCCCTCCTGTCCGAGTTGGCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVDHCGNLGLLQHNL*HPHSIGPPVRVGLF Trigger: GAAGAGGCCAACTCGGACAGGAGGGCCTATGCTGTGTGGGTGTCAGAGGTTATGCTGCAGCAGACCCAGGTTGCCACAGTGATCGACTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102699.8 |
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| CDS-3UTR CAA 90 bp | ATGTGGATAACCTCCCCAAGGTGCTGGAGACGAATGGCAGGGAGGGGCCCACACCGTGTTCTCCTTCTCTaGTGGTTGGCTGGTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MWITSPRCWRRMAGRGPHRVLLL*WLAGCF Trigger: AAAGCAACCAGCCAACCACAAGAGAAGGAGAACACG...GTGTGGGCCCCTCCCTGCCATTCGTCTCCAGCACCTTGGGGAGGTTATCCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS GCA 90 bp | CACCCACACAGCATAGGCCCTCCTGTCCGAGTTGGCCTCTTCTTTTaGCAAGTTTCTCCAAGGGAGGTCACGCTTCTCTTGGTCATACCA | + |
|
Preference number: 5 (lower is better) Translates to: HPHSIGPPVRVGLFF*QVSPREVTLLLVIP Trigger: TGGTATGACCAAGAGAAGCGTGACCTCCCTTGGAGAAACTTGGCAAAAGAAGAGGCCAACTCGGACAGGAGGGCCTATGCTGTGTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102699.8 |
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| CDS GCA 90 bp | GGCCACTTCAGCATAGGCCCTCCTGTCCGAGTTGGCCTCTTCTTTTaGCAAGTTTCTCCAAGGGAGGTCACGCTTCTCTTGGTCATACCA | + |
|
Preference number: 5 (lower is better) Translates to: GHFSIGPPVRVGLFF*QVSPREVTLLLVIP Trigger: TGGTATGACCAAGAGAAGCGTGACCTCCCTTGGAGAAACTTGGCAAAAGAAGAGGCCAACTCGGACAGGAGGGCCTATGCTGAAGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS CCA 90 bp | GTCTTGAAGCTTTGGCCACTTCAGCATAGGCCCTCCTGTCCGAGTTaGCCTCTTCTTTTGCCAAGTTTCTCCAAGGGAGGTCACGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLKLWPLQHRPSCPS*PLLLPSFSKGGHAS Trigger: AGAAGCGTGACCTCCCTTGGAGAAACTTGGCAAAAGAAGAGGCCAACTCGGACAGGAGGGCCTATGCTGAAGTGGCCAAAGCTTCAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS-3UTR CAA 90 bp | TGTTGGGTTTGTCTGTGGGGATATGACGCTGAAAGAAAGTATCCAGGACTTGCTTCCTCTCTCTTCTGCTaGGCCAGGCCATCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CWVCLWGYDAERKYPGLASSLFC*ARPSRL Trigger: CAGCCTGGATGGCCTGGCCAAGCAGAAGAGAGAGGA...AGCAAGTCCTGGATACTTTCTTTCAGCGTCATATCCCCACAGACAAACCCAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS CCA 72 bp | TGCTTGGCCAGGCCATCCAGGCTGGAAGGCTTGGCCTaGCTGCTGCTAAGGGCACGTGTTCTCCTTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CLARPSRLEGLA*LLLRARVLLLL Trigger: CAAGAGAAGGAGAACACGTGCCCTTAGCAGCAGCCAGGCCAAGCCTTCCAGCCTGGATGGCCTGGCCAAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102699.8 ENSMUST00000130359.8 ENSMUST00000155346.8 |
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| CDS CCA 72 bp | AGACAGAGGCCTGCAGTAACTCCTCTCTCTTCTGCTTaGCCAGGCCATCCAGGCTGGAAGGCTTGGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RQRPAVTPLSSA*PGHPGWKAWPG Trigger: GCCAGGCCAAGCCTTCCAGCCTGGATGGCCTGGCCAAGCAGAAGAGAGAGGAGTTACTGCAGGCCTCTGTCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102699.8 ENSMUST00000130359.8 ENSMUST00000155346.8 |
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| CDS CCA 72 bp | CTCCTCCAGGGAAGCGCTGGCCAGGTCTTGAAGCTTTaGCCACTTCAGCATAGGCCCTCCTGTCCGAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLQGSAGQVLKL*PLQHRPSCPSW Trigger: CCAACTCGGACAGGAGGGCCTATGCTGAAGTGGCCAAAGCTTCAAGACCTGGCCAGCGCTTCCCTGGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS CAA 72 bp | CTCTTCTGCTTGGCCAGGCCATCCAGGCTGGAAGGCTaGGCCTGGCTGCTGCTAAGGGCACGTGTTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFCLARPSRLEG*AWLLLRARVLL Trigger: AAGGAGAACACGTGCCCTTAGCAGCAGCCAGGCCAAGCCTTCCAGCCTGGATGGCCTGGCCAAGCAGAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102699.8 ENSMUST00000130359.8 ENSMUST00000155346.8 |
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| CDS CAA 72 bp | GAGACAGAGGCCTGCAGTAACTCCTCTCTCTTCTGCTaGGCCAGGCCATCCAGGCTGGAAGGCTTGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ETEACSNSSLFC*ARPSRLEGLAW Trigger: CCAGGCCAAGCCTTCCAGCCTGGATGGCCTGGCCAAGCAGAAGAGAGAGGAGTTACTGCAGGCCTCTGTCTC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102699.8 ENSMUST00000130359.8 ENSMUST00000155346.8 |
||
| CDS CCA 72 bp | CAGACCAGAGCTGGTTCACCTCCTCCAGGGAAGCGCTaGCCAGGTCTTGAAGCTTTGGCCACTTCTGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: QTRAGSPPPGKR*PGLEALATSAS Trigger: GGATGCAGAAGTGGCCAAAGCTTCAAGACCTGGCCAGCGCTTCCCTGGAGGAGGTGAACCAGCTCTGGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102699.8 |
||
| CDS CAA 72 bp | CTGGTTCACCTCCTCCAGGGAAGCGCTGGCCAGGTCTaGAAGCTTTGGCCACTTCAGCATAGGCCCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LVHLLQGSAGQV*KLWPLQHRPSC Trigger: ACAGGAGGGCCTATGCTGAAGTGGCCAAAGCTTCAAGACCTGGCCAGCGCTTCCCTGGAGGAGGTGAACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS CAA 90 bp | AACTCCTCTCTCTTCTGCTTGGCCAGGCCATCCAGGCTGGAAGGCTaGGCCTGGCTGCTGCTAAGGGCACGTGTTCTCCTTCTCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: NSSLFCLARPSRLEG*AWLLLRARVLLLLW Trigger: CCACAAGAGAAGGAGAACACGTGCCCTTAGCAGCAGCCAGGCCAAGCCTTCCAGCCTGGATGGCCTGGCCAAGCAGAAGAGAGAGGAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102699.8 ENSMUST00000130359.8 ENSMUST00000155346.8 |
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| CDS TCA 72 bp | CACTGTGGCAACCTGGGTCTGCTGCAGCATAACCTCTaGCACCCACACAGCATAGGCCCTCCTGTCCGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: HCGNLGLLQHNL*HPHSIGPPVRV Trigger: AACTCGGACAGGAGGGCCTATGCTGTGTGGGTGTCAGAGGTTATGCTGCAGCAGACCCAGGTTGCCACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102699.8 |
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| CDS CAA 72 bp | CTGGTTCACCTCCTCCAGGGAAGCGCTGGCCAGGTCTaGAAGCTTTGGCCACTTCTGCATCCATCGAGTATA | + |
|
Preference number: 6 (lower is better) Translates to: LVHLLQGSAGQV*KLWPLLHPSSI Trigger: TATACTCGATGGATGCAGAAGTGGCCAAAGCTTCAAGACCTGGCCAGCGCTTCCCTGGAGGAGGTGAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102699.8 |
||
| CDS CAA 90 bp | ACACCCACACAGCATAGGCCCTCCTGTCCGAGTTGGCCTCTTCTTTaGCCAAGTTTCTCCAAGGGAGGTCACGCTTCTCTTGGTCATACC | + |
|
Preference number: 6 (lower is better) Translates to: TPTQHRPSCPSWPLL*PSFSKGGHASLGHT Trigger: GGTATGACCAAGAGAAGCGTGACCTCCCTTGGAGAAACTTGGCAAAAGAAGAGGCCAACTCGGACAGGAGGGCCTATGCTGTGTGGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102699.8 |
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| CDS CAA 90 bp | TGGCCACTTCAGCATAGGCCCTCCTGTCCGAGTTGGCCTCTTCTTTaGCCAAGTTTCTCCAAGGGAGGTCACGCTTCTCTTGGTCATACC | + |
|
Preference number: 6 (lower is better) Translates to: WPLQHRPSCPSWPLL*PSFSKGGHASLGHT Trigger: GGTATGACCAAGAGAAGCGTGACCTCCCTTGGAGAAACTTGGCAAAAGAAGAGGCCAACTCGGACAGGAGGGCCTATGCTGAAGTGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
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| CDS GCA 72 bp | AGCATAGGCCCTCCTGTCCGAGTTGGCCTCTTCTTTTaGCAAGTTTCTCCAAGGGAGGTCACGCTTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SIGPPVRVGLFF*QVSPREVTLLL Trigger: CAAGAGAAGCGTGACCTCCCTTGGAGAAACTTGGCAAAAGAAGAGGCCAACTCGGACAGGAGGGCCTATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102699.8 ENSMUST00000155346.8 |
||
| CDS CCA 72 bp | CTTTGGCCACTTCAGCATAGGCCCTCCTGTCCGAGTTaGCCTCTTCTTTTGCCAAGTTTCTCCAAGGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LWPLQHRPSCPS*PLLLPSFSKGG Trigger: ACCTCCCTTGGAGAAACTTGGCAAAAGAAGAGGCCAACTCGGACAGGAGGGCCTATGCTGAAGTGGCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155346.8 |
||
| CDS CAA 72 bp | CCTCCTCCAGGGAAGCGCTGGCCAGGTCTTGAAGCTTaGGCCACTTCTGCATCCATCGAGTATAATAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PPPGKRWPGLEA*ATSASIEYNSR Trigger: TCGACTATTATACTCGATGGATGCAGAAGTGGCCAAAGCTTCAAGACCTGGCCAGCGCTTCCCTGGAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102699.8 |
||
| CDS CAA 90 bp | AGACCAGAGCTGGTTCACCTCCTCCAGGGAAGCGCTGGCCAGGTCTaGAAGCTTTGGCCACTTCTGCATCCATCGAGTATAATAGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: RPELVHLLQGSAGQV*KLWPLLHPSSIIVD Trigger: ATCGACTATTATACTCGATGGATGCAGAAGTGGCCAAAGCTTCAAGACCTGGCCAGCGCTTCCCTGGAGGAGGTGAACCAGCTCTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102699.8 |
||
| CDS CCA 72 bp | CTCCTCCAGGGAAGCGCTGGCCAGGTCTTGAAGCTTTaGCCACTTCTGCATCCATCGAGTATAATAGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLQGSAGQVLKL*PLLHPSSIIVD Trigger: ATCGACTATTATACTCGATGGATGCAGAAGTGGCCAAAGCTTCAAGACCTGGCCAGCGCTTCCCTGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102699.8 |
||
| CDS CCA 72 bp | TTTGCCAAGTTTCTCCAAGGGAGGTCACGCTTCTCTTaGTCATACCAGCTGAGCAAGTTGCTTCGGAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FAKFLQGRSRFS*SYQLSKLLRKA Trigger: AGCTTTCCGAAGCAACTTGCTCAGCTGGTATGACCAAGAGAAGCGTGACCTCCCTTGGAGAAACTTGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102699.8 ENSMUST00000155346.8 |
||
| CDS CAA 72 bp | TTTTGCCAAGTTTCTCCAAGGGAGGTCACGCTTCTCTaGGTCATACCAGCTGAGCAAGTTGCTTCGGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: FCQVSPREVTLL*VIPAEQVASES Trigger: GCTTTCCGAAGCAACTTGCTCAGCTGGTATGACCAAGAGAAGCGTGACCTCCCTTGGAGAAACTTGGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102699.8 ENSMUST00000155346.8 |
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