RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MUSTN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042485

Ensembl transcript IDs: ENSMUST00000040715.8

Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TACACGCATCAGAAAGTCCGCACCAGGACTCCACGGCTAAGGCTCTaGCTGGAACACCTCAGTGGTTCTGAGAGCACACACATTATTCCC +
Preference number: 1 (lower is better)
Translates to: YTHQKVRTRTPRLRL*LEHLSGSESTHIIP
Trigger: GGGAATAATGTGTGTGCTCTCAGAACCACTGAGGTGTTCCAGGCAGAGCCTTAGCCGTGGAGTCCTGGTGCGGACTTTCTGATGCGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR CCA 90 bp CTTCTGCAGGTAGCGGCCATGGCAACGTCCCAAGGTTGGGGACATTaGGCATACTCTTTATTGGTGTTTCCAAGGGCTAGGGTTGTGGGA +
Preference number: 1 (lower is better)
Translates to: LLQVAAMATSQGWGH*AYSLLVFPRARVVG
Trigger: TCCCACAACCCTAGCCCTTGGAAACACCAATAAAGAGTATGCCCAATGTCCCCAACCTTGGGACGTTGCCATGGCCGCTACCTGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR TCA 90 bp AGGGGCCAGAAGAGGGTGGCAGAGTTCAATGGTTATGAGCTACCATaGGGATATTTGGGAACTGAACCAGAGTCCTCTAAAGAAATGGCA +
Preference number: 1 (lower is better)
Translates to: RGQKRVAEFNGYELP*GYLGTEPESSKEMA
Trigger: TGCCATTTCTTTAGAGGACTCTGGTTCAGTTCCCAAATATCCTCATGGTAGCTCATAACCATTGAACTCTGCCACCCTCTTCTGGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR TCA 90 bp CATACTCTTTATTGGTGTTTCCAAGGGCTAGGGTTGTGGGAGTCATaGTGGTTCAAGAGACAGCAGAGGAAAGGCATCTTCCAGCATTAC +
Preference number: 1 (lower is better)
Translates to: HTLYWCFQGLGLWES*WFKRQQRKGIFQHY
Trigger: GTAATGCTGGAAGATGCCTTTCCTCTGCTGTCTCTTGAACCATCATGACTCCCACAACCCTAGCCCTTGGAAACACCAATAAAGAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR CCA 90 bp TACCATGAGGATATTTGGGAACTGAACCAGAGTCCTCTAAAGAAATaGCAAGTACTTTTAGCTATGGCACCATCTTCCCAGCCTAAAACA +
Preference number: 1 (lower is better)
Translates to: YHEDIWELNQSPLKK*QVLLAMAPSSQPKT
Trigger: TGTTTTAGGCTGGGAAGATGGTGCCATAGCTAAAAGTACTTGCCATTTCTTTAGAGGACTCTGGTTCAGTTCCCAAATATCCTCATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR-3UTR CCA 90 bp GGCATACCACACGTAATGCAATGCCCGCAGGGGCCAGAAGAGGGTGGCAGAGTTGGGCATACTCTTTATTaGTGTTTCCAAGGGCTAGGG +
Preference number: 2 (lower is better)
Translates to: GIPHVMQCPQGPEEGGRVGHTLY*CFQGLG
Trigger: CCCTAGCCCTTGGAAACACCAATAAAGAGTATGCCC...AACTCTGCCACCCTCTTCTGGCCCCTGCGGGCATTGCATTACGTGTGGTATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR-3UTR TCA 90 bp CATACCACACGTAATGCAATGCCCGCAGGGGCCAGAAGAGGGTGGCAGAGTTCAGGTTATGAGCTACCATaGGGATATTTGGGAACTGAA +
Preference number: 2 (lower is better)
Translates to: HTTRNAMPAGARRGWQSSGYELP*GYLGTE
Trigger: TTCAGTTCCCAAATATCCTCATGGTAGCTCATAACC...TGAACTCTGCCACCCTCTTCTGGCCCCTGCGGGCATTGCATTACGTGTGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR-3UTR CAA 90 bp GCAATGCCCGCAGGGGCCAGAAGAGGGTGGCAGAGTTCAATGGTTATGAGCTACGGCAACGTCCCAAGGTaGGGGACATTGGGCATACTC +
Preference number: 3 (lower is better)
Translates to: AMPAGARRGWQSSMVMSYGNVPR*GTLGIL
Trigger: GAGTATGCCCAATGTCCCCAACCTTGGGACGTTGCC...GTAGCTCATAACCATTGAACTCTGCCACCCTCTTCTGGCCCCTGCGGGCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR GCA 72 bp CAGAAAGTCCGCACCAGGACTCCACGGCTAAGGCTCTaGCTGGAACACCTCAGTGGTTCTGAGAGCACACAC +
Preference number: 3 (lower is better)
Translates to: QKVRTRTPRLRL*LEHLSGSESTH
Trigger: GTGTGTGCTCTCAGAACCACTGAGGTGTTCCAGGCAGAGCCTTAGCCGTGGAGTCCTGGTGCGGACTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR GCA 72 bp CTGTCCCACCTCAGAGTCCAGGAAGGGCACCAGATATaGTATGTCCCCACACTTCCCTCTCTTCTGCAGGTA +
Preference number: 3 (lower is better)
Translates to: LSHLRVQEGHQI*YVPTLPSLLQV
Trigger: TACCTGCAGAAGAGAGGGAAGTGTGGGGACATAGCATATCTGGTGCCCTTCCTGGACTCTGAGGTGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR TCA 72 bp ACGGCTAAGGCTCTGCCTGGAACACCTCAGTGGTTCTaGGAGCACACACATTATTCCCTGTCCCACCTCAGA +
Preference number: 3 (lower is better)
Translates to: TAKALPGTPQWF*EHTHYSLSHLR
Trigger: TCTGAGGTGGGACAGGGAATAATGTGTGTGCTCTCAGAACCACTGAGGTGTTCCAGGCAGAGCCTTAGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR CCA 72 bp GTAGCGGCCATGGCAACGTCCCAAGGTTGGGGACATTaGGCATACTCTTTATTGGTGTTTCCAAGGGCTAGG +
Preference number: 3 (lower is better)
Translates to: VAAMATSQGWGH*AYSLLVFPRAR
Trigger: CCTAGCCCTTGGAAACACCAATAAAGAGTATGCCCAATGTCCCCAACCTTGGGACGTTGCCATGGCCGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR-3UTR CAA 90 bp ACCACACGTAATGCAATGCCCGCAGGGGCCAGAAGAGGGTGGCAGAGTTCAATGTGGGCATACTCTTTATaGGTGTTTCCAAGGGCTAGG +
Preference number: 3 (lower is better)
Translates to: TTRNAMPAGARRGWQSSMWAYSL*VFPRAR
Trigger: CCTAGCCCTTGGAAACACCAATAAAGAGTATGCCCA...CATTGAACTCTGCCACCCTCTTCTGGCCCCTGCGGGCATTGCATTACGTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR CCA 72 bp CTTCTGCAGGTAGCGGCCATGGCAACGTCCCAAGGTTaGGGACATTGGGCATACTCTTTATTGGTGTTTCCA +
Preference number: 3 (lower is better)
Translates to: LLQVAAMATSQG*GHWAYSLLVFP
Trigger: TGGAAACACCAATAAAGAGTATGCCCAATGTCCCCAACCTTGGGACGTTGCCATGGCCGCTACCTGCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR CCA 72 bp ACACGTAATGCAATGCCCGCAGGGGCCAGAAGAGGGTaGCAGAGTTCAATGGTTATGAGCTACCATGAGGAT +
Preference number: 3 (lower is better)
Translates to: TRNAMPAGARRG*QSSMVMSYHED
Trigger: ATCCTCATGGTAGCTCATAACCATTGAACTCTGCCACCCTCTTCTGGCCCCTGCGGGCATTGCATTACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR TCA 72 bp AAGAGGGTGGCAGAGTTCAATGGTTATGAGCTACCATaGGGATATTTGGGAACTGAACCAGAGTCCTCTAAA +
Preference number: 3 (lower is better)
Translates to: KRVAEFNGYELP*GYLGTEPESSK
Trigger: TTTAGAGGACTCTGGTTCAGTTCCCAAATATCCTCATGGTAGCTCATAACCATTGAACTCTGCCACCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR CCA 72 bp GATATTTGGGAACTGAACCAGAGTCCTCTAAAGAAATaGCAAGTACTTTTAGCTATGGCACCATCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: DIWELNQSPLKK*QVLLAMAPSSQ
Trigger: CTGGGAAGATGGTGCCATAGCTAAAAGTACTTGCCATTTCTTTAGAGGACTCTGGTTCAGTTCCCAAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR CCA 72 bp CAGAGTTCAATGGTTATGAGCTACCATGAGGATATTTaGGAACTGAACCAGAGTCCTCTAAAGAAATGGCAA +
Preference number: 3 (lower is better)
Translates to: QSSMVMSYHEDI*ELNQSPLKKWQ
Trigger: TTGCCATTTCTTTAGAGGACTCTGGTTCAGTTCCCAAATATCCTCATGGTAGCTCATAACCATTGAACTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
CDS-3UTR TCA 90 bp ACATTATTCCCTGTCCCACCTCAGAGTCCAGGAAGGGCACCAGATATGCTATGTCTGTGCGGTTGCGGCTaGATACAGATGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TLFPVPPQSPGRAPDMLCLCGCG*IQMGQL
Trigger: CAGCTGCCCCATCTGTATTCAGCCGCAACCGCACAG...ACATAGCATATCTGGTGCCCTTCCTGGACTCTGAGGTGGGACAGGGAATAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
3UTR CAA 72 bp TCTTCTGCAGGTAGCGGCCATGGCAACGTCCCAAGGTaGGGGACATTGGGCATACTCTTTATTGGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SSAGSGHGNVPR*GTLGILFIGVS
Trigger: GGAAACACCAATAAAGAGTATGCCCAATGTCCCCAACCTTGGGACGTTGCCATGGCCGCTACCTGCAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
CDS-3UTR CCA 90 bp CGTCCCAAGGTTGGGGACATTGGGCATACTCTTTATTGGTGTTTCCAAGGGCTATTAGACTTGATGTCCTaGTTCTTGGCCAGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RPKVGDIGHTLYWCFQGLLDLMS*FLARVP
Trigger: AGGGACCCTGGCCAAGAACCAGGACATCAAGTCTAA...TAGCCCTTGGAAACACCAATAAAGAGTATGCCCAATGTCCCCAACCTTGGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
CDS-3UTR CCA 90 bp ACATTATTCCCTGTCCCACCTCAGAGTCCAGGAAGGGCACCAGATATGCTATGTTGGCTGGTCCCTCTTTaGGCTTCTCAAAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: TLFPVPPQSPGRAPDMLCWLVPL*ASQRLS
Trigger: AGACAGTCTTTGAGAAGCCCAAAGAGGGACCAGCCA...ACATAGCATATCTGGTGCCCTTCCTGGACTCTGAGGTGGGACAGGGAATAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
CDS TCA 90 bp CTTTGGGCTTCTCAAAGACTGTCTCGGTGCCTGTGCGGTTGCGGCTaGATACAGATGGGGCAGCTGAGCCGGCTTGCTCGTAGTCCCGCA +
Preference number: 5 (lower is better)
Translates to: LWASQRLSRCLCGCG*IQMGQLSRLARSPA
Trigger: TGCGGGACTACGAGCAAGCCGGCTCAGCTGCCCCATCTGTATTCAGCCGCAACCGCACAGGCACCGAGACAGTCTTTGAGAAGCCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
CDS-3UTR CAA 90 bp CCATGGCAACGTCCCAAGGTTGGGGACATTGGGCATACTCTTTATTGGTGTTTCTTGATGTCCTGGTTCTaGGCCAGGGTCCCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: PWQRPKVGDIGHTLYWCFLMSWF*ARVPRA
Trigger: GGCCCGAGGGACCCTGGCCAAGAACCAGGACATCAA...GAAACACCAATAAAGAGTATGCCCAATGTCCCCAACCTTGGGACGTTGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
CDS-3UTR CAA 90 bp ACATTATTCCCTGTCCCACCTCAGAGTCCAGGAAGGGCACCAGATATGCTATGTCAGCCAAACACGCTCTaGGCTGGTCCCTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: TLFPVPPQSPGRAPDMLCQPNTL*AGPSLG
Trigger: GCCCAAAGAGGGACCAGCCAAGAGCGTGTTTGGCTG...ACATAGCATATCTGGTGCCCTTCCTGGACTCTGAGGTGGGACAGGGAATAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
CDS-3UTR CAA 90 bp GACATTGGGCATACTCTTTATTGGTGTTTCCAAGGGCTAGGGTTGTGGGAGTCATTGGCTGGTCCCTCTTaGGGCTTCTCAAAGACTGTC +
Preference number: 5 (lower is better)
Translates to: DIGHTLYWCFQGLGLWESLAGPS*GFSKTV
Trigger: GACAGTCTTTGAGAAGCCCAAAGAGGGACCAGCCAA...TGACTCCCACAACCCTAGCCCTTGGAAACACCAATAAAGAGTATGCCCAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
CDS-3UTR CAA 90 bp GACATTGGGCATACTCTTTATTGGTGTTTCCAAGGGCTAGGGTTGTGGGAGTCATGGTATGTCTTAGACTaGATGTCCTGGTTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: DIGHTLYWCFQGLGLWESWYVLD*MSWFLA
Trigger: GGCCAAGAACCAGGACATCAAGTCTAAGACATACCA...TGACTCCCACAACCCTAGCCCTTGGAAACACCAATAAAGAGTATGCCCAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
CDS CCA 72 bp TCCCGCATGACCTGGTATGTCTTAGACTTGATGTCCTaGTTCTTGGCCAGGGTCCCTCGGGCCCCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: SRMTWYVLDLMS*FLARVPRAPFR
Trigger: CCTGAAGGGGGCCCGAGGGACCCTGGCCAAGAACCAGGACATCAAGTCTAAGACATACCAGGTCATGCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8
CDS CAA 72 bp TTGGGCTTCTCAAAGACTGTCTCGGTGCCTGTGCGGTaGCGGCTGAATACAGATGGGGCAGCTGAGCCGGCT +
Preference number: 6 (lower is better)
Translates to: LGFSKTVSVPVR*RLNTDGAAEPA
Trigger: AGCCGGCTCAGCTGCCCCATCTGTATTCAGCCGCAACCGCACAGGCACCGAGACAGTCTTTGAGAAGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040715.8