RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MUSK (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057280

Ensembl transcript IDs: ENSMUST00000081919.12, ENSMUST00000084578.12, ENSMUST00000098057.10, ENSMUST00000098059.10, ENSMUST00000102893.10, ENSMUST00000177951.8, ENSMUST00000179951.2

Found 598 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTaGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCT +
Preference number: 1 (lower is better)
Translates to: QGRTKQQQDPATCLD*WKKGFLSLVFSPLP
Trigger: AGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR CCA 90 bp TGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTaGATTCAACCTAAGCACTGCAGTCTCGCTCTGAGAGATTATGTA +
Preference number: 1 (lower is better)
Translates to: WAGCLLLKMKLPIQF*IQPKHCSLALRDYV
Trigger: TACATAATCTCTCAGAGCGAGACTGCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAGACATCCTGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR GCA 90 bp ATAGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTaGAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTG +
Preference number: 1 (lower is better)
Translates to: IDTQFQNANTTLHIL*KEELNNSKTLPRVL
Trigger: CAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR CCA 90 bp TCAGTCCTTTACCTAAATATACACAAAGACACATTGCTTTTGCAATaGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCATCCAGTTT +
Preference number: 1 (lower is better)
Translates to: SVLYLNIHKDTLLLQ*AGCLLLKMKLPIQF
Trigger: AAACTGGATGGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTCTTTGTGTATATTTAGGTAAAGGACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR TCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAACTGGCACGTGATGTCTaGGTTAAACTCCTCCTATCT +
Preference number: 2 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQLARDV*VKLLLS
Trigger: AGATAGGAGGAGTTTAACTCAGACATCACGTGCCAG...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR TCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACCTGGCACGTGATGTCTaGGTTAAACTCCTCCTATCT +
Preference number: 2 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDLARDV*VKLLLS
Trigger: AGATAGGAGGAGTTTAACTCAGACATCACGTGCCAG...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR TCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTCTGGCACGTGATGTCTaGGTTAAACTCCTCCTATCT +
Preference number: 2 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTLARDV*VKLLLS
Trigger: AGATAGGAGGAGTTTAACTCAGACATCACGTGCCAG...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR CCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTTTGCCCATCCAGTTTTaGATTCAACCTAAGCACTGC +
Preference number: 2 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTLPIQF*IQPKHC
Trigger: GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAA...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR TCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACCAACCTATTTTGATGTaGCTCTTTAACCCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDQPILM*LFNPVG
Trigger: TCCCACAGGGTTAAAGAGTCACATCAAAATAGGTTG...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR GCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTAAGACACATTGCTTTTaGAATGGGCAGGATGTCTTC +
Preference number: 2 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTKTHCF*NGQDVF
Trigger: GAAGACATCCTGCCCATTGCAAAAGCAATGTGTCTT...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR GCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTAAGACACATTGCTTTTaGAATGGGCAGGATGTCTTC +
Preference number: 2 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLKTHCF*NGQDVF
Trigger: GAAGACATCCTGCCCATTGCAAAAGCAATGTGTCTT...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR CCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTACATTGCTTTTGCAATaGGCAGGATGTCTTCTGTTA +
Preference number: 2 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTTLLLQ*AGCLLL
Trigger: TAACAGAAGACATCCTGCCCATTGCAAAAGCAATGT...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR CCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAACATTGCTTTTGCAATaGGCAGGATGTCTTCTGTTA +
Preference number: 2 (lower is better)
Translates to: TTLHILCKEELNNSKTLPTLLLQ*AGCLLL
Trigger: TAACAGAAGACATCCTGCCCATTGCAAAAGCAATGT...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR TCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGACTGGCACGTGATGTCTaGGTTAAACTCCTCCTATCT +
Preference number: 2 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRLARDV*VKLLLS
Trigger: AGATAGGAGGAGTTTAACTCAGACATCACGTGCCAG...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR TCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACCTGGCACGTGATGTCTaGGTTAAACTCCTCCTATCT +
Preference number: 2 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNLARDV*VKLLLS
Trigger: AGATAGGAGGAGTTTAACTCAGACATCACGTGCCAG...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR CCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGATTGCCCATCCAGTTTTaGATTCAACCTAAGCACTGC +
Preference number: 2 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRLPIQF*IQPKHC
Trigger: GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAA...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACACGTGTCTTGACTGGTaGAAGAAGGGATTCCTATCT +
Preference number: 2 (lower is better)
Translates to: QFQNANTTLHILCKEELNTCLDW*KKGFLS
Trigger: AGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR CCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACGTGTCTTGACTGGTaGAAGAAGGGATTCCTATCT +
Preference number: 2 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRTCLDW*KKGFLS
Trigger: AGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR TCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGACAACCTATTTTGATGTaGCTCTTTAACCCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRQPILM*LFNPVG
Trigger: TCCCACAGGGTTAAAGAGTCACATCAAAATAGGTTG...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR TCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACACAACCTATTTTGATGTaGCTCTTTAACCCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTQPILM*LFNPVG
Trigger: TCCCACAGGGTTAAAGAGTCACATCAAAATAGGTTG...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAAGACACATTGCTTTTaGAATGGGCAGGATGTCTTC +
Preference number: 2 (lower is better)
Translates to: QFQNANTTLHILCKEELNKTHCF*NGQDVF
Trigger: GAAGACATCCTGCCCATTGCAAAAGCAATGTGTCTT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACAAGACACATTGCTTTTaGAATGGGCAGGATGTCTTC +
Preference number: 2 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNKTHCF*NGQDVF
Trigger: GAAGACATCCTGCCCATTGCAAAAGCAATGTGTCTT...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACTACACAAAGACACATTaGTTTTGCAATGGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: QFQNANTTLHILCKEELNYTKTH*FCNGQD
Trigger: ATCCTGCCCATTGCAAAAGCAATGTGTCTTTGTGTA...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR CCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACACATTGCTTTTGCAATaGGCAGGATGTCTTCTGTTA +
Preference number: 2 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNTLLLQ*AGCLLL
Trigger: TAACAGAAGACATCCTGCCCATTGCAAAAGCAATGT...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR TCA 72 bp ACGGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTaGAAAGAGCCTCCTGGGTGTTGTTTGAGAATGGTC +
Preference number: 3 (lower is better)
Translates to: TASAVGFLQLTV*KEPPGCCLRMV
Trigger: GACCATTCTCAAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR TCA 72 bp TTTCTCCTGGCAAACAATCAACTGGCACGTGATGTCTaGGTTAAACTCCTCCTATCTGGTCTTACACGGCCT +
Preference number: 3 (lower is better)
Translates to: FLLANNQLARDV*VKLLLSGLTRP
Trigger: AGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGATTGTTTGCCAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR CCA 72 bp AAACAACAGCAAGACCCTGCCACGTGTCTTGACTGGTaGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCT +
Preference number: 3 (lower is better)
Translates to: KQQQDPATCLDW*KKGFLSLVFSP
Trigger: AGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR CAA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACACCCTGCCACGTGTCTaGACTGGTGGAAGAAGGGAT +
Preference number: 3 (lower is better)
Translates to: QFQNANTTLHILCKEELNTLPRV*TGGRRD
Trigger: ATCCCTTCTTCCACCAGTCAAGACACGTGGCAGGGT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR TCA 72 bp CTGTCCTCTTTCCTAGCCTGTATCTCCAACCTATTTTaGTGTGACTCTTTAACCCTGTGGGATATTCACCAT +
Preference number: 3 (lower is better)
Translates to: LSSFLACISNLF*CDSLTLWDIHH
Trigger: ATGGTGAATATCCCACAGGGTTAAAGAGTCACATCAAAATAGGTTGGAGATACAGGCTAGGAAAGAGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR CAA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAAAAGACACATTGCTTTaGCAATGGGCAGGATGTCTT +
Preference number: 3 (lower is better)
Translates to: TTLHILCKEELNNSKTLPKDTLL*QWAGCL
Trigger: AAGACATCCTGCCCATTGCAAAAGCAATGTGTCTTT...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR CAA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAAAAGACACATTGCTTTaGCAATGGGCAGGATGTCTT +
Preference number: 3 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRKDTLL*QWAGCL
Trigger: AAGACATCCTGCCCATTGCAAAAGCAATGTGTCTTT...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR-3UTR CAA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAAAGACACATTGCTTTaGCAATGGGCAGGATGTCTT +
Preference number: 3 (lower is better)
Translates to: QFQNANTTLHILCKEELNKDTLL*QWAGCL
Trigger: AAGACATCCTGCCCATTGCAAAAGCAATGTGTCTTT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR CCA 72 bp TACCTAAATATACACAAAGACACATTGCTTTTGCAATaGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCC +
Preference number: 3 (lower is better)
Translates to: YLNIHKDTLLLQ*AGCLLLKMKLP
Trigger: GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTCTTTGTGTATATTTAGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGCAGAGCCTCAGCAGCTaGCCGGCACAGTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVQSLSS*PAQWTH
Trigger: GTGAGTCCACTGTGCCGGCCAGCTGCTGAGGCTCTG...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTGGGGTCCCGGTGCATaGTGGGAAGCTTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVWGPGA*WEACCT
Trigger: AGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCA...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGGGGGTTGTCAAACTCTaGCATGAGGGCCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVGVVKL*HEGRLP
Trigger: AGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCC...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGGGTCCCGGTGCATGCTaGGAAGCTTGCTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVGPGAC*EACCTL
Trigger: CAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACC...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGGAGGGACTGCTATGCTaGCAGTGGCTGCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVEGLLC*QWLQPL
Trigger: CAAAGGCTGCAGCCACTGTCAGCATAGCAGTCCCTC...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098057.10
CDS-3UTR GCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGCCACCTGCCTGGCAATaGAGAGCTGTTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVPPAWQ*RAVLHR
Trigger: CCTGTGCAGAACAGCTCTGCATTGCCAGGCAGGTGG...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCCAGAGCCTCAGCAGCTaGCCGGCACAGTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISQSLSS*PAQWTH
Trigger: GTGAGTCCACTGTGCCGGCCAGCTGCTGAGGCTCTG...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCTGGGGTCCCGGTGCATaGTGGGAAGCTTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISWGPGA*WEACCT
Trigger: AGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCA...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCGTAGGCCATGCCAGCTaGCACCTGCCTGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISVGHAS*HLPGNA
Trigger: TGCATTGCCAGGCAGGTGGCAGCTGGCATGGCCTAC...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGCCAGCTTCACCAGTTTaGAGTAAGCTGTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVPASPV*SKLCPG
Trigger: GCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGG...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAGTCTTGTGCAGGCTGTaGGGTCCCGGTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQVLCRL*GPGACW
Trigger: CCAGCATGCACCGGGACCCCACAGCCTGCACAAGAC...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGCGGCAAAGGAAGAGGTaGAGGCAGGCAGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVRQRKR*RQAGLE
Trigger: TTCCAAACCTGCCTGCCTCCACCTCTTCCTTTGCCG...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTACATGGGGTTGGGATaGAGCCTATCCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVYMGLG*SLSSRS
Trigger: GCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTA...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGGTGGACAGGTCACTGTaGCTGAGGCTGCAAACAGTG +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVVDRSL*LRLQTV
Trigger: CACTGTTTGCAGCCTCAGCCACAGTGACCTGTCCAC...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTCTGCACAGGACAGTaGTGGAGGACCAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVFCTGQ*WRTRAR
Trigger: TCTAGCCCTGGTCCTCCACCACTGTCCTGTGCAGAA...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGCGCTGCAGGATCCTGTaGATACTGCAGAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVRCRIL*ILQKLG
Trigger: ACCCAGCTTCTGCAGTATCCACAGGATCCTGCAGCG...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCACAGGTCACTGTGGCTaGGGCTGCAAACAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISTGHCG*GCKQCA
Trigger: CGCACACTGTTTGCAGCCTCAGCCACAGTGACCTGT...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGATCTTTCGCCAGGACTaGATCACACACCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVIFRQD*ITHLPS
Trigger: AGAGGGGAGGTGTGTGATGCAGTCCTGGCGAAAGAT...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGAATGCAGAGCTGTTCTaGACAGGACAGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVNAELF*TGQWWR
Trigger: CCTCCACCACTGTCCTGTGCAGAACAGCTCTGCATT...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCCCACCTGCCTGGCAATaGAGAGCTGTTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISPPAWQ*RAVLHR
Trigger: CCTGTGCAGAACAGCTCTGCATTGCCAGGCAGGTGG...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAACCCACCGTTCCCTCTaGTCTCTCGCACATGCGCTG +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQTHRSL*SLAHAL
Trigger: CAGCGCATGTGCGAGAGAGCAGAGGGAACGGTGGGT...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCAGAGCCTCAGCAGCTaGCCGGCACAGTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFQSLSS*PAQWTH
Trigger: GTGAGTCCACTGTGCCGGCCAGCTGCTGAGGCTCTG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTCTGGTACATGGGGTTaGGATGGAGCCTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVSGTWG*DGAYPA
Trigger: TGCTGGATAGGCTCCATCCCAACCCCATGTACCAGA...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGGCATCCTCTGGTACATaGGGTTGGGATGGAGCCTAT +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVASSGT*GWDGAY
Trigger: ATAGGCTCCATCCCAACCCCATGTACCAGAGGATGC...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCCAGCTGCCACCTGCCTaGCAATGCAGAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISQLPPA*QCRAVL
Trigger: CAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCTG...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCCGTTTTCAATCCAGCTaGTGGTGGGGACAGGGATGC +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISRFQSS*WWGQGC
Trigger: GCATCCCTGTCCCCACCATCAGCTGGATTGAAAACG...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAACAGGTCACTGTGGCTaGGGCTGCAAACAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQTGHCG*GCKQCA
Trigger: CGCACACTGTTTGCAGCCTCAGCCACAGTGACCTGT...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCTGGTGGGGACAGGGATaGCTATTGCTGTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISWWGQG*LLLCSV
Trigger: TACGCTGCACAGCAATAGGCATCCCTGTCCCCACCA...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGAGTGGCTGCAGCCTTTaGGGTACTGAACTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVSGCSL*GTELFS
Trigger: GGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACT...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCGCATGCTGGGAAGCTTaGTGCACTCTGGTACCGGAA +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISACWEA*CTLVPE
Trigger: TTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGC...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTTGGGGTCCCGGTGCATaGTGGGAAGCTTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFWGPGA*WEACCT
Trigger: AGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCA...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCTGAAAGGTAGGCCATaGCAGCTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFLKGRP*QLPPAW
Trigger: CCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTGGTCCCGGTGCATGCTaGGAAGCTTGCTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFGPGAC*EACCTL
Trigger: CAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACC...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGAGGATTCAGAAGGAGTaGCATCCTCTGGTACATGGG +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVRIQKE*HPLVHG
Trigger: CCCATGTACCAGAGGATGCCACTCCTTCTGAATCCT...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCGTGGACAGGTCACTGTaGCTGAGGCTGCAAACAGTG +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISVDRSL*LRLQTV
Trigger: CACTGTTTGCAGCCTCAGCCACAGTGACCTGTCCAC...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAACAGCTGCCACCTGCCTaGCAATGCAGAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQQLPPA*QCRAVL
Trigger: CAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCTG...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCCGCTGCAGGATCCTGTaGATACTGCAGAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISRCRIL*ILQKLG
Trigger: ACCCAGCTTCTGCAGTATCCACAGGATCCTGCAGCG...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAACGTTTTCAATCCAGCTaGTGGTGGGGACAGGGATGC +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQRFQSS*WWGQGC
Trigger: GCATCCCTGTCCCCACCATCAGCTGGATTGAAAACG...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGGAAGAGCTGGAGTCTTaGGTCAATCACTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVEELES*VNHSVF
Trigger: AAAGACCGAGTGATTGACTCAAGACTCCAGCTCTTC...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTAGGGCCGCCTCCCTCTaGAAGTCCGCTTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGRAASL*KSACMS
Trigger: AGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCT...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTTGTCAAACTCTGCCATaGGGGCCGCCTCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFCQTLP*GPPPSE
Trigger: TTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACA...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTCGGAGGAACTCATTaGGGTCACCATAGGCCATAT +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVFGGTH*GHHRPY
Trigger: ATATGGCCTATGGTGACCTCAATGAGTTCCTCCGAA...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTACAGGTCACTGTGGCTaGGGCTGCAAACAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFTGHCG*GCKQCA
Trigger: CGCACACTGTTTGCAGCCTCAGCCACAGTGACCTGT...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGAGCACGCAGGATTCTTaGAAAAACCTCCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVSTQDS*KNLHFQ
Trigger: CTGGAAGTGGAGGTTTTTGCAAGAATCCTGCGTGCT...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000102893.10
CDS-3UTR GCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCATCTTTCGCCAGGACTaGATCACACACCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISIFRQD*ITHLPS
Trigger: AGAGGGGAGGTGTGTGATGCAGTCCTGGCGAAAGAT...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAAGGCTGCAAACAGTGTaGGGGGACATACTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQRLQTV*GDILRR
Trigger: CCTCCGAAGTATGTCCCCGCACACTGTTTGCAGCCT...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTATGCCAGCTGCCACCTaGCTGGCAATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFMPAAT*LAMQSC
Trigger: ACAGCTCTGCATTGCCAGGCAGGTGGCAGCTGGCAT...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTACCCACCGTTCCCTCTaGTCTCTCGCACATGCGCTG +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGTHRSL*SLAHAL
Trigger: CAGCGCATGTGCGAGAGAGCAGAGGGAACGGTGGGT...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGGCATGTGTAGAGTCCTaGCTTTGTGATGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVACVES*LCDEEL
Trigger: CAGCTCTTCATCACAAAGCCAGGACTCTACACATGC...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTGGTCCCGGTGCATGCTaGGAAGCTTGCTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGGPGAC*EACCTL
Trigger: CAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACC...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAACGGCAAAGGAAGAGGTaGAGGCAGGCAGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQRQRKR*RQAGLE
Trigger: TTCCAAACCTGCCTGCCTCCACCTCTTCCTTTGCCG...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAAGGAGTGGCATCCTCTaGTACATGGGGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQRSGIL*YMGLGW
Trigger: CCATCCCAACCCCATGTACCAGAGGATGCCACTCCT...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAATTCTGCACAGGACAGTaGTGGAGGACCAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQFCTGQ*WRTRAR
Trigger: TCTAGCCCTGGTCCTCCACCACTGTCCTGTGCAGAA...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCAGCTGCCACCTGCCTaGCAATGCAGAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFQLPPA*QCRAVL
Trigger: CAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCTG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGCGGAATAGATGTTCCTaGAGAGGCCAAAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVRNRCS*RGQSLQ
Trigger: TTGCAGACTTTGGCCTCTCCAGGAACATCTATTCCG...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTAGAATGGTGAGGAGCTaGCCATTCTCCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFRMVRS*PFSRML
Trigger: CAGCATCCGGGAGAATGGTCAGCTCCTCACCATTCT...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAGACCATTCTCCCGGATaGTGTAGCGGGTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQDHSPG*CSGCQT
Trigger: TGTTTGACACCCGCTACAGCATCCGGGAGAATGGTC...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCGGTTTCATCTTCACTTaGAGGGCACCACAACTCTCC +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISGFIFT*RAPQLS
Trigger: GGAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACC...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGACAGCGGTACTGTCCTaGATCTTCCTTTTGCACATT +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVTAVLS*IFLLHI
Trigger: AATGTGCAAAAGGAAGATGCAGGACAGTACCGCTGT...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTCCACCTGCCTGGCAATaGAGAGCTGTTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGPPAWQ*RAVLHR
Trigger: CCTGTGCAGAACAGCTCTGCATTGCCAGGCAGGTGG...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCCTCCCACTCCATTGTTaGCTATGCAGCAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISLPLHC*LCSSRC
Trigger: GCATCTACTGCTGCATAGCCAACAATGGAGTGGGAG...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTTGCCCAGGCTGTTTTTaGCCACACAGCGGTACTGTC +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFCPGCF*PHSGTV
Trigger: GACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCA...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCCAGCTTCACCAGTTTaGAGTAAGCTGTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFPASPV*SKLCPG
Trigger: GCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCGTCTTGTGCAGGCTGTaGGGTCCCGGTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGVLCRL*GPGACW
Trigger: CCAGCATGCACCGGGACCCCACAGCCTGCACAAGAC...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCGGCAAAGGAAGAGGTaGAGGCAGGCAGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFRQRKR*RQAGLE
Trigger: TTCCAAACCTGCCTGCCTCCACCTCTTCCTTTGCCG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAATCTGGTACATGGGGTTaGGATGGAGCCTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQSGTWG*DGAYPA
Trigger: TGCTGGATAGGCTCCATCCCAACCCCATGTACCAGA...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAGCATCCTCTGGTACATaGGGTTGGGATGGAGCCTAT +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQASSGT*GWDGAY
Trigger: ATAGGCTCCATCCCAACCCCATGTACCAGAGGATGC...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGATACATCCGACTCAGTaGTGTAGCGGTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVIHPTQ*CSGCRR
Trigger: TCTTCTACAACCGCTACACCACTGAGTCGGATGTAT...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTCGTTTTCAATCCAGCTaGTGGTGGGGACAGGGATGC +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGRFQSS*WWGQGC
Trigger: GCATCCCTGTCCCCACCATCAGCTGGATTGAAAACG...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAACCCGGTAGGAGGTGTTaGAGAAGACAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQPGRRC*RRQEHL
Trigger: AAGATGCTCTTGTCTTCTTCAACACCTCCTACCGGG...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTGACAAACTTGCGCTCTaGAAGGTAGGCCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGDKLAL*KVGHAS
Trigger: GCTGGCATGGCCTACCTTTCAGAGCGCAAGTTTGTC...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAGTTTGGAGTAAGCTGTaGCCAGGCTGTTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQVWSKL*PGCFWP
Trigger: TGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAAC...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAAGTGGCTGCAGCCTTTaGGGTACTGAACTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQSGCSL*GTELFS
Trigger: GGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACT...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTGTCCGCTTGCATGTCTaGAGAGGCCTCTTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFVRLHV*RGLFLK
Trigger: CTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGAC...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTCCAGCTTCACCAGTTTaGAGTAAGCTGTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGPASPV*SKLCPG
Trigger: GCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGG...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCCAAAGGTGACATTGTaGGATTCAGGAGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFPKVTL*DSGARR
Trigger: CCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTCAGAGCCTCAGCAGCTaGCCGGCACAGTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTQSLSS*PAQWTH
Trigger: GTGAGTCCACTGTGCCGGCCAGCTGCTGAGGCTCTG...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAACACTCTTGGAAGAGGTaGTTACACAGCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQHSWKR*LHSRAS
Trigger: TGAGGCTCTGCTGTGTAACCACCTCTTCCAAGAGTG...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTCCAGGGCTGCACTCTTaGAAGAGGTGGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGPGLHS*KRWLHS
Trigger: GCTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGG...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTGTCTTGTGCAGGCTGTaGGGTCCCGGTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTVLCRL*GPGACW
Trigger: CCAGCATGCACCGGGACCCCACAGCCTGCACAAGAC...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACGTCTTGTGCAGGCTGTaGGGTCCCGGTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDVLCRL*GPGACW
Trigger: CCAGCATGCACCGGGACCCCACAGCCTGCACAAGAC...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAAGGATTCAGAAGGAGTaGCATCCTCTGGTACATGGG +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQRIQKE*HPLVHG
Trigger: CCCATGTACCAGAGGATGCCACTCCTTCTGAATCCT...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGAGAGTTTCACAATGTTaGGGTTGTCAAACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVRVSQC*GCQTLP
Trigger: TGGCAGAGTTTGACAACCCCAACATTGTGAAACTCT...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTTTCTGCACAGGACAGTaGTGGAGGACCAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGFCTGQ*WRTRAR
Trigger: TCTAGCCCTGGTCCTCCACCACTGTCCTGTGCAGAA...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTCTTTCACACTCTCTTaGATGGAACCTGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVSFTLS*MEPEET
Trigger: TGTTTCTTCAGGTTCCATTCAAGAGAGTGTGAAAGA...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTAGGGCCGCCTCCCTCTaGAAGTCCGCTTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTRAASL*KSACMS
Trigger: AGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCT...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCTGTCAAACTCTGCCATaGGGGCCGCCTCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGCQTLP*GPPPSE
Trigger: TTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACA...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCACAGGTCACTGTGGCTaGGGCTGCAAACAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGTGHCG*GCKQCA
Trigger: CGCACACTGTTTGCAGCCTCAGCCACAGTGACCTGT...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCCTATGCAGCAGTAGATaGCATCATCACTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISLCSSR*HHHCLP
Trigger: TGGAAGACAGTGATGATGGCATCTACTGCTGCATAG...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTGTTTGGAGTAAGCTGTaGCCAGGCTGTTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFVWSKL*PGCFWP
Trigger: TGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAAC...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAAGCACGCAGGATTCTTaGAAAAACCTCCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQSTQDS*KNLHFQ
Trigger: CTGGAAGTGGAGGTTTTTGCAAGAATCCTGCGTGCT...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000102893.10
CDS-3UTR GCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTGTCCGCTTGCATGTCTaGAGAGGCCTCTTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGVRLHV*RGLFLK
Trigger: CTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGAC...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTGGGGTTGTCAAACTCTaGCATGAGGGCCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTGVVKL*HEGRLP
Trigger: AGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCC...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACGGGGTTGTCAAACTCTaGCATGAGGGCCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDGVVKL*HEGRLP
Trigger: AGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCC...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCCACCTGCCTGGCAATaGAGAGCTGTTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGPPAWQ*RAVLHR
Trigger: CCTGTGCAGAACAGCTCTGCATTGCCAGGCAGGTGG...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACGTAGGCCATGCCAGCTaGCACCTGCCTGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDVGHAS*HLPGNA
Trigger: TGCATTGCCAGGCAGGTGGCAGCTGGCATGGCCTAC...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACCTGAAAGGTAGGCCATaGCAGCTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDLKGRP*QLPPAW
Trigger: CCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAG...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTCTGAAAGGTAGGCCATaGCAGCTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTLKGRP*QLPPAW
Trigger: CCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAG...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTACCCACCGTTCCCTCTaGTCTCTCGCACATGCGCTG +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTTHRSL*SLAHAL
Trigger: CAGCGCATGTGCGAGAGAGCAGAGGGAACGGTGGGT...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTCAGAGCCTCAGCAGCTaGCCGGCACAGTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLQSLSS*PAQWTH
Trigger: GTGAGTCCACTGTGCCGGCCAGCTGCTGAGGCTCTG...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGTCTTGTGCAGGCTGTaGGGTCCCGGTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCVLCRL*GPGACW
Trigger: CCAGCATGCACCGGGACCCCACAGCCTGCACAAGAC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTTCTGGTACATGGGGTTaGGATGGAGCCTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGSGTWG*DGAYPA
Trigger: TGCTGGATAGGCTCCATCCCAACCCCATGTACCAGA...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCAATTTTCACCACCATaGTCTCCCCAACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFQFSPP*SPQPGS
Trigger: ACTGCCTGGTTGGGGAGACCATGGTGGTGAAAATTG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCATACATCCGACTCAGTaGTGTAGCGGTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISIHPTQ*CSGCRR
Trigger: TCTTCTACAACCGCTACACCACTGAGTCGGATGTAT...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCAGAATGGTGAGGAGCTaGCCATTCTCCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGRMVRS*PFSRML
Trigger: CAGCATCCGGGAGAATGGTCAGCTCCTCACCATTCT...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTCCCGGTAGGAGGTGTTaGAGAAGACAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGPGRRC*RRQEHL
Trigger: AAGATGCTCTTGTCTTCTTCAACACCTCCTACCGGG...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTGTCAAACTCTGCCATaGGGGCCGCCTCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDCQTLP*GPPPSE
Trigger: TTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACA...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTTGTCAAACTCTGCCATaGGGGCCGCCTCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTCQTLP*GPPPSE
Trigger: TTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACA...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTTTCGGAGGAACTCATTaGGGTCACCATAGGCCATAT +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFFGGTH*GHHRPY
Trigger: ATATGGCCTATGGTGACCTCAATGAGTTCCTCCGAA...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTGGTTTCATCTTCACTTaGAGGGCACCACAACTCTCC +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGGFIFT*RAPQLS
Trigger: GGAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACC...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTAGTGGCTGCAGCCTTTaGGGTACTGAACTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGSGCSL*GTELFS
Trigger: GGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACT...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCGTACCACTCCAGGGCTaGACTCTTGGAAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGVPLQG*TLGRGG
Trigger: ACCACCTCTTCCAAGAGTGCAGCCCTGGAGTGGTAC...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGTAGGCCATGCCAGCTaGCACCTGCCTGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCVGHAS*HLPGNA
Trigger: TGCATTGCCAGGCAGGTGGCAGCTGGCATGGCCTAC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTGAAAGGTAGGCCATaGCAGCTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCLKGRP*QLPPAW
Trigger: CCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAG...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAGCTTTGTAGTAGTCTaGGGAATAGATGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISSFVVV*GIDVPG
Trigger: TCCAGGAACATCTATTCCGCAGACTACTACAAAGCT...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTGGCAGGCGAGGATGTTaGCATCTCTCACATAGTAAA +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFGRRGC*HLSHSK
Trigger: TTTACTATGTGAGAGATGGCAACATCCTCGCCTGCC...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTGCATGTGTAGAGTCCTaGCTTTGTGATGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFACVES*LCDEEL
Trigger: CAGCTCTTCATCACAAAGCCAGGACTCTACACATGC...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTCACTCTTGGAAGAGGTaGTTACACAGCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGHSWKR*LHSRAS
Trigger: TGAGGCTCTGCTGTGTAACCACCTCTTCCAAGAGTG...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCTACATGGGGTTGGGATaGAGCCTATCCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGYMGLG*SLSSRS
Trigger: GCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTA...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCAGGAGTGGCATCCTCTaGTACATGGGGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGRSGIL*YMGLGW
Trigger: CCATCCCAACCCCATGTACCAGAGGATGCCACTCCT...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTAGGATTCAGAAGGAGTaGCATCCTCTGGTACATGGG +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGRIQKE*HPLVHG
Trigger: CCCATGTACCAGAGGATGCCACTCCTTCTGAATCCT...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACCAGCTGCCACCTGCCTaGCAATGCAGAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDQLPPA*QCRAVL
Trigger: CAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCTG...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTCAATTTTCACCACCATaGTCTCCCCAACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGQFSPP*SPQPGS
Trigger: ACTGCCTGGTTGGGGAGACCATGGTGGTGAAAATTG...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCGCTGCAGGATCCTGTaGATACTGCAGAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGRCRIL*ILQKLG
Trigger: ACCCAGCTTCTGCAGTATCCACAGGATCCTGCAGCG...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACAGAATGGTGAGGAGCTaGCCATTCTCCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDRMVRS*PFSRML
Trigger: CAGCATCCGGGAGAATGGTCAGCTCCTCACCATTCT...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAAGGGCCGCCTCCCTCTaGAAGTCCGCTTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPRAASL*KSACMS
Trigger: AGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCT...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTACAGGTCACTGTGGCTaGGGCTGCAAACAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCTGHCG*GCKQCA
Trigger: CGCACACTGTTTGCAGCCTCAGCCACAGTGACCTGT...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTGACAAACTTGCGCTCTaGAAGGTAGGCCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTDKLAL*KVGHAS
Trigger: GCTGGCATGGCCTACCTTTCAGAGCGCAAGTTTGTC...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCTCCATTGTTGGCTATaGAGCAGTAGATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFLHCWL*SSRCHH
Trigger: ATGATGGCATCTACTGCTGCATAGCCAACAATGGAG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTTGGTGGGGACAGGGATaGCTATTGCTGTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTWWGQG*LLLCSV
Trigger: TACGCTGCACAGCAATAGGCATCCCTGTCCCCACCA...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCCTGAACTTTTCTCCGTaGTTATTGGTAGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISLNFSP*LLVAMH
Trigger: ATGCATAGCTACCAATAAGCACGGAGAAAAGTTCAG...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTGTACCACTCCAGGGCTaGACTCTTGGAAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTVPLQG*TLGRGG
Trigger: ACCACCTCTTCCAAGAGTGCAGCCCTGGAGTGGTAC...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCATGGGGTCCCGGTGCATaGTGGGAAGCTTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPWGPGA*WEACCT
Trigger: AGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCA...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAGGGGTTGTCAAACTCTaGCATGAGGGCCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPGVVKL*HEGRLP
Trigger: AGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCC...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCCACCTGCCTGGCAATaGAGAGCTGTTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCPPAWQ*RAVLHR
Trigger: CCTGTGCAGAACAGCTCTGCATTGCCAGGCAGGTGG...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTATGCCAGCTGCCACCTaGCTGGCAATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLMPAAT*LAMQSC
Trigger: ACAGCTCTGCATTGCCAGGCAGGTGGCAGCTGGCAT...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAGTAGGCCATGCCAGCTaGCACCTGCCTGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPVGHAS*HLPGNA
Trigger: TGCATTGCCAGGCAGGTGGCAGCTGGCATGGCCTAC...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACTGAAAGGTAGGCCATaGCAGCTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPLKGRP*QLPPAW
Trigger: CCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAG...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAAAGCTTTGTAGTAGTCTaGGGAATAGATGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQSFVVV*GIDVPG
Trigger: TCCAGGAACATCTATTCCGCAGACTACTACAAAGCT...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAACCCACCGTTCCCTCTaGTCTCTCGCACATGCGCTG +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPTHRSL*SLAHAL
Trigger: CAGCGCATGTGCGAGAGAGCAGAGGGAACGGTGGGT...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTTGCCCAGGCTGTTTTTaGCCACACAGCGGTACTGTC +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTCPGCF*PHSGTV
Trigger: GACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCA...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCTCACACTCTCTTGAATaGAACCTGAAGAAACAGCAT +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISSHSLE*NLKKQH
Trigger: ATGCTGTTTCTTCAGGTTCCATTCAAGAGAGTGTGA...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCTTTGTGATGAAGAGCTaGAGTCTTGAGTCAATCACT +
Preference number: 4 (lower is better)
Translates to: VPVRERSYLLSSFLACISFVMKS*SLESIT
Trigger: AGTGATTGACTCAAGACTCCAGCTCTTCATCACAAA...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCCAGAGCCTCAGCAGCTaGCCGGCACAGTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCQSLSS*PAQWTH
Trigger: GTGAGTCCACTGTGCCGGCCAGCTGCTGAGGCTCTG...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCGGTCCCGGTGCATGCTaGGAAGCTTGCTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPGPGAC*EACCTL
Trigger: CAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACC...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTCGGCAAAGGAAGAGGTaGAGGCAGGCAGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTRQRKR*RQAGLE
Trigger: TTCCAAACCTGCCTGCCTCCACCTCTTCCTTTGCCG...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCTCTGGTACATGGGGTTaGGATGGAGCCTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGSGTWG*DGAYPA
Trigger: TGCTGGATAGGCTCCATCCCAACCCCATGTACCAGA...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCAGCTGCCACCTGCCTaGCAATGCAGAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCQLPPA*QCRAVL
Trigger: CAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCTG...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTCGGAATAGATGTTCCTaGAGAGGCCAAAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGRNRCS*RGQSLQ
Trigger: TTGCAGACTTTGGCCTCTCCAGGAACATCTATTCCG...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTATACATCCGACTCAGTaGTGTAGCGGTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFIHPTQ*CSGCRR
Trigger: TCTTCTACAACCGCTACACCACTGAGTCGGATGTAT...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTCGCTGCAGGATCCTGTaGATACTGCAGAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTRCRIL*ILQKLG
Trigger: ACCCAGCTTCTGCAGTATCCACAGGATCCTGCAGCG...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCTCTTGAATGGAACCTaGAGAAACAGCATTTCCGTT +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFLLNGT*RNSISV
Trigger: AACGGAAATGCTGTTTCTTCAGGTTCCATTCAAGAG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGACAAACTTGCGCTCTaGAAGGTAGGCCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCDKLAL*KVGHAS
Trigger: GCTGGCATGGCCTACCTTTCAGAGCGCAAGTTTGTC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTGACCATTCTCCCGGATaGTGTAGCGGGTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTDHSPG*CSGCQT
Trigger: TGTTTGACACCCGCTACAGCATCCGGGAGAATGGTC...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAACCTGCATCTTCCTTTTaGACATTATGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQPASSF*TLWILK
Trigger: CTTAAGGATCCATAATGTGCAAAAGGAAGATGCAGG...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTACAGCGGTACTGTCCTaGATCTTCCTTTTGCACATT +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGTAVLS*IFLLHI
Trigger: AATGTGCAAAAGGAAGATGCAGGACAGTACCGCTGT...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCGTTTGGAGTAAGCTGTaGCCAGGCTGTTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGVWSKL*PGCFWP
Trigger: TGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAAC...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTTGGTGGGGACAGGGATaGCTATTGCTGTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCWWGQG*LLLCSV
Trigger: TACGCTGCACAGCAATAGGCATCCCTGTCCCCACCA...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCAGTGGCTGCAGCCTTTaGGGTACTGAACTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGSGCSL*GTELFS
Trigger: GGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACT...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTATCTTTCGCCAGGACTaGATCACACACCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTIFRQD*ITHLPS
Trigger: AGAGGGGAGGTGTGTGATGCAGTCCTGGCGAAAGAT...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGTACCACTCCAGGGCTaGACTCTTGGAAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLVPLQG*TLGRGG
Trigger: ACCACCTCTTCCAAGAGTGCAGCCCTGGAGTGGTAC...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGCATGCTGGGAAGCTTaGTGCACTCTGGTACCGGAA +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCACWEA*CTLVPE
Trigger: TTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTGTCCGCTTGCATGTCTaGAGAGGCCTCTTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTVRLHV*RGLFLK
Trigger: CTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGAC...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCGGGGTTGTCAAACTCTaGCATGAGGGCCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCGVVKL*HEGRLP
Trigger: AGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCC...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTAGGCTGCAAACAGTGTaGGGGGACATACTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLRLQTV*GDILRR
Trigger: CCTCCGAAGTATGTCCCCGCACACTGTTTGCAGCCT...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTAATGCAGAGCTGTTCTaGACAGGACAGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTNAELF*TGQWWR
Trigger: CCTCCACCACTGTCCTGTGCAGAACAGCTCTGCATT...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACAATGCAGAGCTGTTCTaGACAGGACAGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDNAELF*TGQWWR
Trigger: CCTCCACCACTGTCCTGTGCAGAACAGCTCTGCATT...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACCACCTGCCTGGCAATaGAGAGCTGTTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPPPAWQ*RAVLHR
Trigger: CCTGTGCAGAACAGCTCTGCATTGCCAGGCAGGTGG...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAATGCCAGCTGCCACCTaGCTGGCAATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPMPAAT*LAMQSC
Trigger: ACAGCTCTGCATTGCCAGGCAGGTGGCAGCTGGCAT...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCGTAGGCCATGCCAGCTaGCACCTGCCTGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCVGHAS*HLPGNA
Trigger: TGCATTGCCAGGCAGGTGGCAGCTGGCATGGCCTAC...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCGATGACAGGGGCTTTTaGAAGTTTCTCAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGDDRGF*KFLSPA
Trigger: AGCGGGACTGAGAAACTTCCAAAAGCCCCTGTCATC...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAATTTGTGATGAAGAGCTaGAGTCTTGAGTCAATCACT +
Preference number: 4 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQFVMKS*SLESIT
Trigger: AGTGATTGACTCAAGACTCCAGCTCTTCATCACAAA...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTCCAGGGCTGCACTCTTaGAAGAGGTGGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLPGLHS*KRWLHS
Trigger: GCTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGG...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTCTGGTACATGGGGTTaGGATGGAGCCTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDSGTWG*DGAYPA
Trigger: TGCTGGATAGGCTCCATCCCAACCCCATGTACCAGA...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACGCATCCTCTGGTACATaGGGTTGGGATGGAGCCTAT +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDASSGT*GWDGAY
Trigger: ATAGGCTCCATCCCAACCCCATGTACCAGAGGATGC...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTAGGAGTGGCATCCTCTaGTACATGGGGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCRSGIL*YMGLGW
Trigger: CCATCCCAACCCCATGTACCAGAGGATGCCACTCCT...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTAGAGTTTCACAATGTTaGGGTTGTCAAACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFRVSQC*GCQTLP
Trigger: TGGCAGAGTTTGACAACCCCAACATTGTGAAACTCT...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGTGGACAGGTCACTGTaGCTGAGGCTGCAAACAGTG +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCVDRSL*LRLQTV
Trigger: CACTGTTTGCAGCCTCAGCCACAGTGACCTGTCCAC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCGTAGCTAAGTCCCGGTaGACAAACTTGCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGVAKSR*TNLRSE
Trigger: TTCAGAGCGCAAGTTTGTCCACCGGGACTTAGCTAC...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCAATTTTCACCACCATaGTCTCCCCAACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGQFSPP*SPQPGS
Trigger: ACTGCCTGGTTGGGGAGACCATGGTGGTGAAAATTG...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTATACATCCGACTCAGTaGTGTAGCGGTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGIHPTQ*CSGCRR
Trigger: TCTTCTACAACCGCTACACCACTGAGTCGGATGTAT...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTCGCTGCAGGATCCTGTaGATACTGCAGAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLRCRIL*ILQKLG
Trigger: ACCCAGCTTCTGCAGTATCCACAGGATCCTGCAGCG...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTCTCTTGAATGGAACCTaGAGAAACAGCATTTCCGTT +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGLLNGT*RNSISV
Trigger: AACGGAAATGCTGTTTCTTCAGGTTCCATTCAAGAG...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTATGTCAAACTCTGCCATaGGGGCCGCCTCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLCQTLP*GPPPSE
Trigger: TTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACA...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCGACAAACTTGCGCTCTaGAAGGTAGGCCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPDKLAL*KVGHAS
Trigger: GCTGGCATGGCCTACCTTTCAGAGCGCAAGTTTGTC...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGACCATTCTCCCGGATaGTGTAGCGGGTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCDHSPG*CSGCQT
Trigger: TGTTTGACACCCGCTACAGCATCCGGGAGAATGGTC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCCTGCATCTTCCTTTTaGACATTATGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFPASSF*TLWILK
Trigger: CTTAAGGATCCATAATGTGCAAAAGGAAGATGCAGG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCTGAACTTTTCTCCGTaGTTATTGGTAGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFLNFSP*LLVAMH
Trigger: ATGCATAGCTACCAATAAGCACGGAGAAAAGTTCAG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACAGTGGCTGCAGCCTTTaGGGTACTGAACTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDSGCSL*GTELFS
Trigger: GGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACT...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTATCTTTCGCCAGGACTaGATCACACACCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLIFRQD*ITHLPS
Trigger: AGAGGGGAGGTGTGTGATGCAGTCCTGGCGAAAGAT...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCATGCCAGCTGCCACCTaGCTGGCAATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCMPAAT*LAMQSC
Trigger: ACAGCTCTGCATTGCCAGGCAGGTGGCAGCTGGCAT...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCATGCCCAGGCTGTTTTTaGCCACACAGCGGTACTGTC +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPCPGCF*PHSGTV
Trigger: GACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCA...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCCAAAGGTGACATTGTaGGATTCAGGAGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCPKVTL*DSGARR
Trigger: CCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGG...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTTTTGTGATGAAGAGCTaGAGTCTTGAGTCAATCACT +
Preference number: 4 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFFVMKS*SLESIT
Trigger: AGTGATTGACTCAAGACTCCAGCTCTTCATCACAAA...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCGCATGTGTAGAGTCCTaGCTTTGTGATGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGACVES*LCDEEL
Trigger: CAGCTCTTCATCACAAAGCCAGGACTCTACACATGC...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACCACTCTTGGAAGAGGTaGTTACACAGCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDHSWKR*LHSRAS
Trigger: TGAGGCTCTGCTGTGTAACCACCTCTTCCAAGAGTG...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTCACTCTTGGAAGAGGTaGTTACACAGCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTHSWKR*LHSRAS
Trigger: TGAGGCTCTGCTGTGTAACCACCTCTTCCAAGAGTG...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACCAGGGCTGCACTCTTaGAAGAGGTGGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPPGLHS*KRWLHS
Trigger: GCTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGG...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCATACATGGGGTTGGGATaGAGCCTATCCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPYMGLG*SLSSRS
Trigger: GCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTA...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCTACATGGGGTTGGGATaGAGCCTATCCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPYMGLG*SLSSRS
Trigger: GCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTA...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTAGGATTCAGAAGGAGTaGCATCCTCTGGTACATGGG +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTRIQKE*HPLVHG
Trigger: CCCATGTACCAGAGGATGCCACTCCTTCTGAATCCT...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACAGGATTCAGAAGGAGTaGCATCCTCTGGTACATGGG +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDRIQKE*HPLVHG
Trigger: CCCATGTACCAGAGGATGCCACTCCTTCTGAATCCT...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTAGAGTTTCACAATGTTaGGGTTGTCAAACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGRVSQC*GCQTLP
Trigger: TGGCAGAGTTTGACAACCCCAACATTGTGAAACTCT...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCATTCTGCACAGGACAGTaGTGGAGGACCAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPFCTGQ*WRTRAR
Trigger: TCTAGCCCTGGTCCTCCACCACTGTCCTGTGCAGAA...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTGTAGCTAAGTCCCGGTaGACAAACTTGCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTVAKSR*TNLRSE
Trigger: TTCAGAGCGCAAGTTTGTCCACCGGGACTTAGCTAC...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACGTTTTCAATCCAGCTaGTGGTGGGGACAGGGATGC +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLRFQSS*WWGQGC
Trigger: GCATCCCTGTCCCCACCATCAGCTGGATTGAAAACG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACGAAGAGCTGGAGTCTTaGGTCAATCACTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDEELES*VNHSVF
Trigger: AAAGACCGAGTGATTGACTCAAGACTCCAGCTCTTC...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTAGACAAACTTGCGCTCTaGAAGGTAGGCCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLDKLAL*KVGHAS
Trigger: GCTGGCATGGCCTACCTTTCAGAGCGCAAGTTTGTC...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCTCCATTCTGCTATGCTaGCAGTGGCTGCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPSILLC*QWLQPL
Trigger: CAAAGGCTGCAGCCACTGTCAGCATAGCAGAATGGA...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084578.12
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS-3UTR GCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAGACCATTCTCCCGGATaGTGTAGCGGGTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPDHSPG*CSGCQT
Trigger: TGTTTGACACCCGCTACAGCATCCGGGAGAATGGTC...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTATGCAGCAGTAGATaGCATCATCACTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGLCSSR*HHHCLP
Trigger: TGGAAGACAGTGATGATGGCATCTACTGCTGCATAG...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGTTTGGAGTAAGCTGTaGCCAGGCTGTTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCVWSKL*PGCFWP
Trigger: TGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAAC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTATGGTGGGGACAGGGATaGCTATTGCTGTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLWWGQG*LLLCSV
Trigger: TACGCTGCACAGCAATAGGCATCCCTGTCCCCACCA...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCTGGTGGGGACAGGGATaGCTATTGCTGTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCWWGQG*LLLCSV
Trigger: TACGCTGCACAGCAATAGGCATCCCTGTCCCCACCA...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCGTACCACTCCAGGGCTaGACTCTTGGAAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCVPLQG*TLGRGG
Trigger: ACCACCTCTTCCAAGAGTGCAGCCCTGGAGTGGTAC...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTAGCATGCTGGGAAGCTTaGTGCACTCTGGTACCGGAA +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLACWEA*CTLVPE
Trigger: TTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGC...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCGCATGCTGGGAAGCTTaGTGCACTCTGGTACCGGAA +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCACWEA*CTLVPE
Trigger: TTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGC...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAGTCCGCTTGCATGTCTaGAGAGGCCTCTTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPVRLHV*RGLFLK
Trigger: CTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGAC...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTAAGGCTGCAAACAGTGTaGGGGGACATACTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLRLQTV*GDILRR
Trigger: CCTCCGAAGTATGTCCCCGCACACTGTTTGCAGCCT...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCAGGCTGCAAACAGTGTaGGGGGACATACTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCRLQTV*GDILRR
Trigger: CCTCCGAAGTATGTCCCCGCACACTGTTTGCAGCCT...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCAATGCAGAGCTGTTCTaGACAGGACAGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPNAELF*TGQWWR
Trigger: CCTCCACCACTGTCCTGTGCAGAACAGCTCTGCATT...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAAATGCAGAGCTGTTCTaGACAGGACAGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPNAELF*TGQWWR
Trigger: CCTCCACCACTGTCCTGTGCAGAACAGCTCTGCATT...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTGGCAGGCGAGGATGTTaGCATCTCTCACATAGTAAA +
Preference number: 4 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTGRRGC*HLSHSK
Trigger: TTTACTATGTGAGAGATGGCAACATCCTCGCCTGCC...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGATGACAGGGGCTTTTaGAAGTTTCTCAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCDDRGF*KFLSPA
Trigger: AGCGGGACTGAGAAACTTCCAAAAGCCCCTGTCATC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTCTCCCACTCCATTGTTaGCTATGCAGCAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLLPLHC*LCSSRC
Trigger: GCATCTACTGCTGCATAGCCAACAATGGAGTGGGAG...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTTCCTTTTGCACATTATaGATCCTTAAGCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGSFCTL*ILKLPD
Trigger: ATCTGGGAGCTTAAGGATCCATAATGTGCAAAAGGA...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCTGCCCAGGCTGTTTTTaGCCACACAGCGGTACTGTC +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCCPGCF*PHSGTV
Trigger: GACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCA...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCCCAGCTTCACCAGTTTaGAGTAAGCTGTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCPASPV*SKLCPG
Trigger: GCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGG...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCAGCTTCACCAGTTTaGAGTAAGCTGTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLPASPV*SKLCPG
Trigger: GCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCCCAAAGGTGACATTGTaGGATTCAGGAGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPPKVTL*DSGARR
Trigger: CCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGG...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCAGAGCCTCAGCAGCTaGCCGGCACAGTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNQSLSS*PAQWTH
Trigger: GTGAGTCCACTGTGCCGGCCAGCTGCTGAGGCTCTG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCCCAGGGCTGCACTCTTaGAAGAGGTGGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCPGLHS*KRWLHS
Trigger: GCTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGG...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCAGGGCTGCACTCTTaGAAGAGGTGGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLPGLHS*KRWLHS
Trigger: GCTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACGTCTTGTGCAGGCTGTaGGGTCCCGGTGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNVLCRL*GPGACW
Trigger: CCAGCATGCACCGGGACCCCACAGCCTGCACAAGAC...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACGGCAAAGGAAGAGGTaGAGGCAGGCAGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLRQRKR*RQAGLE
Trigger: TTCCAAACCTGCCTGCCTCCACCTCTTCCTTTGCCG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCATCTGGTACATGGGGTTaGGATGGAGCCTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPSGTWG*DGAYPA
Trigger: TGCTGGATAGGCTCCATCCCAACCCCATGTACCAGA...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCGCATCCTCTGGTACATaGGGTTGGGATGGAGCCTAT +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPASSGT*GWDGAY
Trigger: ATAGGCTCCATCCCAACCCCATGTACCAGAGGATGC...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCGTGGACAGGTCACTGTaGCTGAGGCTGCAAACAGTG +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCVDRSL*LRLQTV
Trigger: CACTGTTTGCAGCCTCAGCCACAGTGACCTGTCCAC...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGTAGCTAAGTCCCGGTaGACAAACTTGCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCVAKSR*TNLRSE
Trigger: TTCAGAGCGCAAGTTTGTCCACCGGGACTTAGCTAC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCAATTTTCACCACCATaGTCTCCCCAACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCQFSPP*SPQPGS
Trigger: ACTGCCTGGTTGGGGAGACCATGGTGGTGAAAATTG...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGAAGAGCTGGAGTCTTaGGTCAATCACTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCEELES*VNHSVF
Trigger: AAAGACCGAGTGATTGACTCAAGACTCCAGCTCTTC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACCCGGTAGGAGGTGTTaGAGAAGACAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPPGRRC*RRQEHL
Trigger: AAGATGCTCTTGTCTTCTTCAACACCTCCTACCGGG...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACAGGGCCGCCTCCCTCTaGAAGTCCGCTTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNRAASL*KSACMS
Trigger: AGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCT...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAGGGCCGCCTCCCTCTaGAAGTCCGCTTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNRAASL*KSACMS
Trigger: AGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTTTCGGAGGAACTCATTaGGGTCACCATAGGCCATAT +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLFGGTH*GHHRPY
Trigger: ATATGGCCTATGGTGACCTCAATGAGTTCCTCCGAA...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACCTCCATTGTTGGCTATaGAGCAGTAGATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDLHCWL*SSRCHH
Trigger: ATGATGGCATCTACTGCTGCATAGCCAACAATGGAG...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTAGCACGCAGGATTCTTaGAAAAACCTCCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCSTQDS*KNLHFQ
Trigger: CTGGAAGTGGAGGTTTTTGCAAGAATCCTGCGTGCT...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000102893.10
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCATCTTTCGCCAGGACTaGATCACACACCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCIFRQD*ITHLPS
Trigger: AGAGGGGAGGTGTGTGATGCAGTCCTGGCGAAAGAT...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGATGGGGTCCCGGTGCATaGTGGGAAGCTTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRWGPGA*WEACCT
Trigger: AGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCA...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACTGGGGTCCCGGTGCATaGTGGGAAGCTTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNWGPGA*WEACCT
Trigger: AGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCA...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACGGGGTTGTCAAACTCTaGCATGAGGGCCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNGVVKL*HEGRLP
Trigger: AGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCC...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACGGGGTTGTCAAACTCTaGCATGAGGGCCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNGVVKL*HEGRLP
Trigger: AGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCC...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACGTAGGCCATGCCAGCTaGCACCTGCCTGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNVGHAS*HLPGNA
Trigger: TGCATTGCCAGGCAGGTGGCAGCTGGCATGGCCTAC...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCTGAAAGGTAGGCCATaGCAGCTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNLKGRP*QLPPAW
Trigger: CCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACCTGAAAGGTAGGCCATaGCAGCTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNLKGRP*QLPPAW
Trigger: CCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAG...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCAGCTTTGTAGTAGTCTaGGGAATAGATGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGSFVVV*GIDVPG
Trigger: TCCAGGAACATCTATTCCGCAGACTACTACAAAGCT...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGGCAGGCGAGGATGTTaGCATCTCTCACATAGTAAA +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCGRRGC*HLSHSK
Trigger: TTTACTATGTGAGAGATGGCAACATCCTCGCCTGCC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACACCCACCGTTCCCTCTaGTCTCTCGCACATGCGCTG +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNTHRSL*SLAHAL
Trigger: CAGCGCATGTGCGAGAGAGCAGAGGGAACGGTGGGT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACCCACCGTTCCCTCTaGTCTCTCGCACATGCGCTG +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRTHRSL*SLAHAL
Trigger: CAGCGCATGTGCGAGAGAGCAGAGGGAACGGTGGGT...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCGATGACAGGGGCTTTTaGAAGTTTCTCAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPDDRGF*KFLSPA
Trigger: AGCGGGACTGAGAAACTTCCAAAAGCCCCTGTCATC...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCAAAGGTGACATTGTaGGATTCAGGAGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLPKVTL*DSGARR
Trigger: CCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTGCATGTGTAGAGTCCTaGCTTTGTGATGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCACVES*LCDEEL
Trigger: CAGCTCTTCATCACAAAGCCAGGACTCTACACATGC...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCCACTCTTGGAAGAGGTaGTTACACAGCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPHSWKR*LHSRAS
Trigger: TGAGGCTCTGCTGTGTAACCACCTCTTCCAAGAGTG...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACGGTCCCGGTGCATGCTaGGAAGCTTGCTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNGPGAC*EACCTL
Trigger: CAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACC...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCGCATCCTCTGGTACATaGGGTTGGGATGGAGCCTAT +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCASSGT*GWDGAY
Trigger: ATAGGCTCCATCCCAACCCCATGTACCAGAGGATGC...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACAATTTTCACCACCATaGTCTCCCCAACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPQFSPP*SPQPGS
Trigger: ACTGCCTGGTTGGGGAGACCATGGTGGTGAAAATTG...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACCTCTTGAATGGAACCTaGAGAAACAGCATTTCCGTT +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDLLNGT*RNSISV
Trigger: AACGGAAATGCTGTTTCTTCAGGTTCCATTCAAGAG...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCTCTTTCACACTCTCTTaGATGGAACCTGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGSFTLS*MEPEET
Trigger: TGTTTCTTCAGGTTCCATTCAAGAGAGTGTGAAAGA...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCGAAGAGCTGGAGTCTTaGGTCAATCACTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPEELES*VNHSVF
Trigger: AAAGACCGAGTGATTGACTCAAGACTCCAGCTCTTC...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCCGGTAGGAGGTGTTaGAGAAGACAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLPGRRC*RRQEHL
Trigger: AAGATGCTCTTGTCTTCTTCAACACCTCCTACCGGG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACTGTCAAACTCTGCCATaGGGGCCGCCTCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNCQTLP*GPPPSE
Trigger: TTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACA...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACACAGGTCACTGTGGCTaGGGCTGCAAACAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNTGHCG*GCKQCA
Trigger: CGCACACTGTTTGCAGCCTCAGCCACAGTGACCTGT...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTATGCAGCAGTAGATaGCATCATCACTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCLCSSR*HHHCLP
Trigger: TGGAAGACAGTGATGATGGCATCTACTGCTGCATAG...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCGGTTTCATCTTCACTTaGAGGGCACCACAACTCTCC +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCGFIFT*RAPQLS
Trigger: GGAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACC...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCGTTTGGAGTAAGCTGTaGCCAGGCTGTTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCVWSKL*PGCFWP
Trigger: TGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAAC...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTAGTTTGGAGTAAGCTGTaGCCAGGCTGTTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLVWSKL*PGCFWP
Trigger: TGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAAC...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACAATGCCAGCTGCCACCTaGCTGGCAATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTMPAAT*LAMQSC
Trigger: ACAGCTCTGCATTGCCAGGCAGGTGGCAGCTGGCAT...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACATGCCAGCTGCCACCTaGCTGGCAATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNMPAAT*LAMQSC
Trigger: ACAGCTCTGCATTGCCAGGCAGGTGGCAGCTGGCAT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTAGATGACAGGGGCTTTTaGAAGTTTCTCAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLDDRGF*KFLSPA
Trigger: AGCGGGACTGAGAAACTTCCAAAAGCCCCTGTCATC...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCCTCCCACTCCATTGTTaGCTATGCAGCAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCLPLHC*LCSSRC
Trigger: GCATCTACTGCTGCATAGCCAACAATGGAGTGGGAG...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCTCACACTCTCTTGAATaGAACCTGAAGAAACAGCAT +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGSHSLE*NLKKQH
Trigger: ATGCTGTTTCTTCAGGTTCCATTCAAGAGAGTGTGA...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCTTTGTGATGAAGAGCTaGAGTCTTGAGTCAATCACT +
Preference number: 4 (lower is better)
Translates to: INWHVMSELNSSYLVLHGFVMKS*SLESIT
Trigger: AGTGATTGACTCAAGACTCCAGCTCTTCATCACAAA...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCGCATGTGTAGAGTCCTaGCTTTGTGATGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPACVES*LCDEEL
Trigger: CAGCTCTTCATCACAAAGCCAGGACTCTACACATGC...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACACAGCTGCCACCTGCCTaGCAATGCAGAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTQLPPA*QCRAVL
Trigger: CAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCTG...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGACAGCTGCCACCTGCCTaGCAATGCAGAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRQLPPA*QCRAVL
Trigger: CAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCTG...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCGTAGCTAAGTCCCGGTaGACAAACTTGCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCVAKSR*TNLRSE
Trigger: TTCAGAGCGCAAGTTTGTCCACCGGGACTTAGCTAC...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACAATTTTCACCACCATaGTCTCCCCAACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLQFSPP*SPQPGS
Trigger: ACTGCCTGGTTGGGGAGACCATGGTGGTGAAAATTG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACAGAATGGTGAGGAGCTaGCCATTCTCCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNRMVRS*PFSRML
Trigger: CAGCATCCGGGAGAATGGTCAGCTCCTCACCATTCT...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAGAATGGTGAGGAGCTaGCCATTCTCCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNRMVRS*PFSRML
Trigger: CAGCATCCGGGAGAATGGTCAGCTCCTCACCATTCT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGACGTTTTCAATCCAGCTaGTGGTGGGGACAGGGATGC +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRRFQSS*WWGQGC
Trigger: GCATCCCTGTCCCCACCATCAGCTGGATTGAAAACG...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACACGTTTTCAATCCAGCTaGTGGTGGGGACAGGGATGC +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTRFQSS*WWGQGC
Trigger: GCATCCCTGTCCCCACCATCAGCTGGATTGAAAACG...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTCTTTCACACTCTCTTaGATGGAACCTGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDSFTLS*MEPEET
Trigger: TGTTTCTTCAGGTTCCATTCAAGAGAGTGTGAAAGA...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCGAAGAGCTGGAGTCTTaGGTCAATCACTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCEELES*VNHSVF
Trigger: AAAGACCGAGTGATTGACTCAAGACTCCAGCTCTTC...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTATTCGGAGGAACTCATTaGGGTCACCATAGGCCATAT +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLFGGTH*GHHRPY
Trigger: ATATGGCCTATGGTGACCTCAATGAGTTCCTCCGAA...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACGACAAACTTGCGCTCTaGAAGGTAGGCCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNDKLAL*KVGHAS
Trigger: GCTGGCATGGCCTACCTTTCAGAGCGCAAGTTTGTC...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCCTCCATTGTTGGCTATaGAGCAGTAGATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPLHCWL*SSRCHH
Trigger: ATGATGGCATCTACTGCTGCATAGCCAACAATGGAG...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACATGGTGGGGACAGGGATaGCTATTGCTGTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTWWGQG*LLLCSV
Trigger: TACGCTGCACAGCAATAGGCATCCCTGTCCCCACCA...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACCTGAACTTTTCTCCGTaGTTATTGGTAGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDLNFSP*LLVAMH
Trigger: ATGCATAGCTACCAATAAGCACGGAGAAAAGTTCAG...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACGTACCACTCCAGGGCTaGACTCTTGGAAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNVPLQG*TLGRGG
Trigger: ACCACCTCTTCCAAGAGTGCAGCCCTGGAGTGGTAC...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACGCATGCTGGGAAGCTTaGTGCACTCTGGTACCGGAA +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNACWEA*CTLVPE
Trigger: TTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGC...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACAGCATGCTGGGAAGCTTaGTGCACTCTGGTACCGGAA +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTACWEA*CTLVPE
Trigger: TTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGC...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACAGGCTGCAAACAGTGTaGGGGGACATACTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNRLQTV*GDILRR
Trigger: CCTCCGAAGTATGTCCCCGCACACTGTTTGCAGCCT...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTAGCTTTGTAGTAGTCTaGGGAATAGATGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLSFVVV*GIDVPG
Trigger: TCCAGGAACATCTATTCCGCAGACTACTACAAAGCT...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTAGCTTTGTAGTAGTCTaGGGAATAGATGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCSFVVV*GIDVPG
Trigger: TCCAGGAACATCTATTCCGCAGACTACTACAAAGCT...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCGGCAGGCGAGGATGTTaGCATCTCTCACATAGTAAA +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCGRRGC*HLSHSK
Trigger: TTTACTATGTGAGAGATGGCAACATCCTCGCCTGCC...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTCCTTTTGCACATTATaGATCCTTAAGCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDSFCTL*ILKLPD
Trigger: ATCTGGGAGCTTAAGGATCCATAATGTGCAAAAGGA...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCCAGCTTCACCAGTTTaGAGTAAGCTGTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNPASPV*SKLCPG
Trigger: GCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACCCAGCTTCACCAGTTTaGAGTAAGCTGTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNPASPV*SKLCPG
Trigger: GCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGG...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTCACACTCTCTTGAATaGAACCTGAAGAAACAGCAT +
Preference number: 4 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDSHSLE*NLKKQH
Trigger: ATGCTGTTTCTTCAGGTTCCATTCAAGAGAGTGTGA...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCCAGGGCTGCACTCTTaGAAGAGGTGGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNPGLHS*KRWLHS
Trigger: GCTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCGGCAAAGGAAGAGGTaGAGGCAGGCAGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNRQRKR*RQAGLE
Trigger: TTCCAAACCTGCCTGCCTCCACCTCTTCCTTTGCCG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACTACATGGGGTTGGGATaGAGCCTATCCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNYMGLG*SLSSRS
Trigger: GCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTA...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACATACATGGGGTTGGGATaGAGCCTATCCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTYMGLG*SLSSRS
Trigger: GCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTA...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACAGGAGTGGCATCCTCTaGTACATGGGGTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNRSGIL*YMGLGW
Trigger: CCATCCCAACCCCATGTACCAGAGGATGCCACTCCT...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACAGTGGACAGGTCACTGTaGCTGAGGCTGCAAACAGTG +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTVDRSL*LRLQTV
Trigger: CACTGTTTGCAGCCTCAGCCACAGTGACCTGTCCAC...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACGTGGACAGGTCACTGTaGCTGAGGCTGCAAACAGTG +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNVDRSL*LRLQTV
Trigger: CACTGTTTGCAGCCTCAGCCACAGTGACCTGTCCAC...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACTTCTGCACAGGACAGTaGTGGAGGACCAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNFCTGQ*WRTRAR
Trigger: TCTAGCCCTGGTCCTCCACCACTGTCCTGTGCAGAA...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACGGAATAGATGTTCCTaGAGAGGCCAAAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLRNRCS*RGQSLQ
Trigger: TTGCAGACTTTGGCCTCTCCAGGAACATCTATTCCG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACACGCTGCAGGATCCTGTaGATACTGCAGAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTRCRIL*ILQKLG
Trigger: ACCCAGCTTCTGCAGTATCCACAGGATCCTGCAGCG...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCCTCTTGAATGGAACCTaGAGAAACAGCATTTCCGTT +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPLLNGT*RNSISV
Trigger: AACGGAAATGCTGTTTCTTCAGGTTCCATTCAAGAG...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTTCTTTCACACTCTCTTaGATGGAACCTGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCSFTLS*MEPEET
Trigger: TGTTTCTTCAGGTTCCATTCAAGAGAGTGTGAAAGA...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGATCCATTCTGCTATGCTaGCAGTGGCTGCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRSILLC*QWLQPL
Trigger: CAAAGGCTGCAGCCACTGTCAGCATAGCAGAATGGA...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084578.12
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS-3UTR GCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACAGACCATTCTCCCGGATaGTGTAGCGGGTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTDHSPG*CSGCQT
Trigger: TGTTTGACACCCGCTACAGCATCCGGGAGAATGGTC...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACTATGCAGCAGTAGATaGCATCATCACTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLLCSSR*HHHCLP
Trigger: TGGAAGACAGTGATGATGGCATCTACTGCTGCATAG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCCTCCATTGTTGGCTATaGAGCAGTAGATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCLHCWL*SSRCHH
Trigger: ATGATGGCATCTACTGCTGCATAGCCAACAATGGAG...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACTCCATTGTTGGCTATaGAGCAGTAGATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLLHCWL*SSRCHH
Trigger: ATGATGGCATCTACTGCTGCATAGCCAACAATGGAG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCCTGCATCTTCCTTTTaGACATTATGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCPASSF*TLWILK
Trigger: CTTAAGGATCCATAATGTGCAAAAGGAAGATGCAGG...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTCCTGCATCTTCCTTTTaGACATTATGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLPASSF*TLWILK
Trigger: CTTAAGGATCCATAATGTGCAAAAGGAAGATGCAGG...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCACAGCGGTACTGTCCTaGATCTTCCTTTTGCACATT +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCTAVLS*IFLLHI
Trigger: AATGTGCAAAAGGAAGATGCAGGACAGTACCGCTGT...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTCTGAACTTTTCTCCGTaGTTATTGGTAGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLLNFSP*LLVAMH
Trigger: ATGCATAGCTACCAATAAGCACGGAGAAAAGTTCAG...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAATCTTTCGCCAGGACTaGATCACACACCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRIFRQD*ITHLPS
Trigger: AGAGGGGAGGTGTGTGATGCAGTCCTGGCGAAAGAT...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACATCTTTCGCCAGGACTaGATCACACACCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNIFRQD*ITHLPS
Trigger: AGAGGGGAGGTGTGTGATGCAGTCCTGGCGAAAGAT...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAGTCCGCTTGCATGTCTaGAGAGGCCTCTTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRVRLHV*RGLFLK
Trigger: CTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGAC...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACAGTCCGCTTGCATGTCTaGAGAGGCCTCTTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTVRLHV*RGLFLK
Trigger: CTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGAC...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACAATGCAGAGCTGTTCTaGACAGGACAGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNNAELF*TGQWWR
Trigger: CCTCCACCACTGTCCTGTGCAGAACAGCTCTGCATT...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCAGCTTTGTAGTAGTCTaGGGAATAGATGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPSFVVV*GIDVPG
Trigger: TCCAGGAACATCTATTCCGCAGACTACTACAAAGCT...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTTCCTTTTGCACATTATaGATCCTTAAGCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLSFCTL*ILKLPD
Trigger: ATCTGGGAGCTTAAGGATCCATAATGTGCAAAAGGA...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCCAAAGGTGACATTGTaGGATTCAGGAGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNPKVTL*DSGARR
Trigger: CCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACGCATCCTCTGGTACATaGGGTTGGGATGGAGCCTAT +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNASSGT*GWDGAY
Trigger: ATAGGCTCCATCCCAACCCCATGTACCAGAGGATGC...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAGCATCCTCTGGTACATaGGGTTGGGATGGAGCCTAT +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRASSGT*GWDGAY
Trigger: ATAGGCTCCATCCCAACCCCATGTACCAGAGGATGC...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAAGAGTTTCACAATGTTaGGGTTGTCAAACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPRVSQC*GCQTLP
Trigger: TGGCAGAGTTTGACAACCCCAACATTGTGAAACTCT...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCATACATCCGACTCAGTaGTGTAGCGGTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCIHPTQ*CSGCRR
Trigger: TCTTCTACAACCGCTACACCACTGAGTCGGATGTAT...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGACCCGGTAGGAGGTGTTaGAGAAGACAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRPGRRC*RRQEHL
Trigger: AAGATGCTCTTGTCTTCTTCAACACCTCCTACCGGG...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACACCCGGTAGGAGGTGTTaGAGAAGACAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTPGRRC*RRQEHL
Trigger: AAGATGCTCTTGTCTTCTTCAACACCTCCTACCGGG...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACGGTTTCATCTTCACTTaGAGGGCACCACAACTCTCC +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNGFIFT*RAPQLS
Trigger: GGAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACC...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACAGGTTTCATCTTCACTTaGAGGGCACCACAACTCTCC +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTGFIFT*RAPQLS
Trigger: GGAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACC...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCCCTGCATCTTCCTTTTaGACATTATGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPPASSF*TLWILK
Trigger: CTTAAGGATCCATAATGTGCAAAAGGAAGATGCAGG...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAGTTTGGAGTAAGCTGTaGCCAGGCTGTTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRVWSKL*PGCFWP
Trigger: TGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAAC...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACTGAACTTTTCTCCGTaGTTATTGGTAGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPLNFSP*LLVAMH
Trigger: ATGCATAGCTACCAATAAGCACGGAGAAAAGTTCAG...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACAAGTGGCTGCAGCCTTTaGGGTACTGAACTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTSGCSL*GTELFS
Trigger: GGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACT...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAGTGGCTGCAGCCTTTaGGGTACTGAACTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNSGCSL*GTELFS
Trigger: GGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACGATGACAGGGGCTTTTaGAAGTTTCTCAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNDDRGF*KFLSPA
Trigger: AGCGGGACTGAGAAACTTCCAAAAGCCCCTGTCATC...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCTCCCACTCCATTGTTaGCTATGCAGCAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNLPLHC*LCSSRC
Trigger: GCATCTACTGCTGCATAGCCAACAATGGAGTGGGAG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACACTCCCACTCCATTGTTaGCTATGCAGCAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTLPLHC*LCSSRC
Trigger: GCATCTACTGCTGCATAGCCAACAATGGAGTGGGAG...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGACTCCCACTCCATTGTTaGCTATGCAGCAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRLPLHC*LCSSRC
Trigger: GCATCTACTGCTGCATAGCCAACAATGGAGTGGGAG...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACCTCCCACTCCATTGTTaGCTATGCAGCAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNLPLHC*LCSSRC
Trigger: GCATCTACTGCTGCATAGCCAACAATGGAGTGGGAG...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCATTTGTGATGAAGAGCTaGAGTCTTGAGTCAATCACT +
Preference number: 4 (lower is better)
Translates to: TTLHILCKEELNNSKTLPFVMKS*SLESIT
Trigger: AGTGATTGACTCAAGACTCCAGCTCTTCATCACAAA...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCACTCTTGGAAGAGGTaGTTACACAGCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNHSWKR*LHSRAS
Trigger: TGAGGCTCTGCTGTGTAACCACCTCTTCCAAGAGTG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACACACTCTTGGAAGAGGTaGTTACACAGCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTHSWKR*LHSRAS
Trigger: TGAGGCTCTGCTGTGTAACCACCTCTTCCAAGAGTG...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAGTAGCTAAGTCCCGGTaGACAAACTTGCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRVAKSR*TNLRSE
Trigger: TTCAGAGCGCAAGTTTGTCCACCGGGACTTAGCTAC...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACGTAGCTAAGTCCCGGTaGACAAACTTGCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNVAKSR*TNLRSE
Trigger: TTCAGAGCGCAAGTTTGTCCACCGGGACTTAGCTAC...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGACAATTTTCACCACCATaGTCTCCCCAACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRQFSPP*SPQPGS
Trigger: ACTGCCTGGTTGGGGAGACCATGGTGGTGAAAATTG...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTATCTTTCACACTCTCTTaGATGGAACCTGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLSFTLS*MEPEET
Trigger: TGTTTCTTCAGGTTCCATTCAAGAGAGTGTGAAAGA...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACGAAGAGCTGGAGTCTTaGGTCAATCACTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNEELES*VNHSVF
Trigger: AAAGACCGAGTGATTGACTCAAGACTCCAGCTCTTC...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACTTCGGAGGAACTCATTaGGGTCACCATAGGCCATAT +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNFGGTH*GHHRPY
Trigger: ATATGGCCTATGGTGACCTCAATGAGTTCCTCCGAA...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACTGAACTTTTCTCCGTaGTTATTGGTAGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLLNFSP*LLVAMH
Trigger: ATGCATAGCTACCAATAAGCACGGAGAAAAGTTCAG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACGGCAGGCGAGGATGTTaGCATCTCTCACATAGTAAA +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNGRRGC*HLSHSK
Trigger: TTTACTATGTGAGAGATGGCAACATCCTCGCCTGCC...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCTCCTTTTGCACATTATaGATCCTTAAGCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCSFCTL*ILKLPD
Trigger: ATCTGGGAGCTTAAGGATCCATAATGTGCAAAAGGA...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTATCACACTCTCTTGAATaGAACCTGAAGAAACAGCAT +
Preference number: 4 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLSHSLE*NLKKQH
Trigger: ATGCTGTTTCTTCAGGTTCCATTCAAGAGAGTGTGA...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCTCACACTCTCTTGAATaGAACCTGAAGAAACAGCAT +
Preference number: 4 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCSHSLE*NLKKQH
Trigger: ATGCTGTTTCTTCAGGTTCCATTCAAGAGAGTGTGA...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACAGCATGTGTAGAGTCCTaGCTTTGTGATGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTACVES*LCDEEL
Trigger: CAGCTCTTCATCACAAAGCCAGGACTCTACACATGC...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACACGGAATAGATGTTCCTaGAGAGGCCAAAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTRNRCS*RGQSLQ
Trigger: TTGCAGACTTTGGCCTCTCCAGGAACATCTATTCCG...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCGGAATAGATGTTCCTaGAGAGGCCAAAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNRNRCS*RGQSLQ
Trigger: TTGCAGACTTTGGCCTCTCCAGGAACATCTATTCCG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCTATGCAGCAGTAGATaGCATCATCACTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNLCSSR*HHHCLP
Trigger: TGGAAGACAGTGATGATGGCATCTACTGCTGCATAG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACCTCCATTGTTGGCTATaGAGCAGTAGATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNLHCWL*SSRCHH
Trigger: ATGATGGCATCTACTGCTGCATAGCCAACAATGGAG...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACACAGCGGTACTGTCCTaGATCTTCCTTTTGCACATT +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNTAVLS*IFLLHI
Trigger: AATGTGCAAAAGGAAGATGCAGGACAGTACCGCTGT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACAGCGGTACTGTCCTaGATCTTCCTTTTGCACATT +
Preference number: 4 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRTAVLS*IFLLHI
Trigger: AATGTGCAAAAGGAAGATGCAGGACAGTACCGCTGT...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACAACAGCGGTACTGTCCTaGATCTTCCTTTTGCACATT +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTTAVLS*IFLLHI
Trigger: AATGTGCAAAAGGAAGATGCAGGACAGTACCGCTGT...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACACTCTTGAATGGAACCTaGAGAAACAGCATTTCCGTT +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTLLNGT*RNSISV
Trigger: AACGGAAATGCTGTTTCTTCAGGTTCCATTCAAGAG...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR TCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACCTCTTGAATGGAACCTaGAGAAACAGCATTTCCGTT +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNLLNGT*RNSISV
Trigger: AACGGAAATGCTGTTTCTTCAGGTTCCATTCAAGAG...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAGCTTTGTAGTAGTCTaGGGAATAGATGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNSFVVV*GIDVPG
Trigger: TCCAGGAACATCTATTCCGCAGACTACTACAAAGCT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACAGAGTTTCACAATGTTaGGGTTGTCAAACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNRVSQC*GCQTLP
Trigger: TGGCAGAGTTTGACAACCCCAACATTGTGAAACTCT...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAGAGTTTCACAATGTTaGGGTTGTCAAACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNRVSQC*GCQTLP
Trigger: TGGCAGAGTTTGACAACCCCAACATTGTGAAACTCT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCCTGCATCTTCCTTTTaGACATTATGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNPASSF*TLWILK
Trigger: CTTAAGGATCCATAATGTGCAAAAGGAAGATGCAGG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR GCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCTGAACTTTTCTCCGTaGTTATTGGTAGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNLNFSP*LLVAMH
Trigger: ATGCATAGCTACCAATAAGCACGGAGAAAAGTTCAG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACTCCTTTTGCACATTATaGATCCTTAAGCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: QFQNANTTLHILCKEELNSFCTL*ILKLPD
Trigger: ATCTGGGAGCTTAAGGATCCATAATGTGCAAAAGGA...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTCCTTTTGCACATTATaGATCCTTAAGCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNSFCTL*ILKLPD
Trigger: ATCTGGGAGCTTAAGGATCCATAATGTGCAAAAGGA...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACATCCTTTTGCACATTATaGATCCTTAAGCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTSFCTL*ILKLPD
Trigger: ATCTGGGAGCTTAAGGATCCATAATGTGCAAAAGGA...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CCA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACATCACACTCTCTTGAATaGAACCTGAAGAAACAGCAT +
Preference number: 4 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTSHSLE*NLKKQH
Trigger: ATGCTGTTTCTTCAGGTTCCATTCAAGAGAGTGTGA...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
3UTR CAA 72 bp TTTTCAGTCCTTTACCTAAATATACACAAAGACACATaGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: FSVLYLNIHKDT*LLQWAGCLLLK
Trigger: TTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTCTTTGTGTATATTTAGGTAAAGGACTGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp GCAGGCTGTGGGGTCCCGGTGCATGCTGGGAAGCTTGCTGCACTCTaGTACCGGAAGGAGATGCATCCCAGATCTGTAGAGGCCCCGGTG +
Preference number: 5 (lower is better)
Translates to: AGCGVPVHAGKLAAL*YRKEMHPRSVEAPV
Trigger: CACCGGGGCCTCTACAGATCTGGGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp AGCTGCCACCTGCCTGGCAATGCAGAGCTGTTCTGCACAGGACAGTaGTGGAGGACCAGGGCTAGACACCCGAGCCCTCGTGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: SCHLPGNAELFCTGQ*WRTRARHPSPRGQV
Trigger: GACCTGTCCACGAGGGCTCGGGTGTCTAGCCCTGGTCCTCCACCACTGTCCTGTGCAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp GGAGGACCAGGGCTAGACACCCGAGCCCTCGTGGACAGGTCACTGTaGCTGAGGCTGCAAACAGTGTGCGGGGACATACTTCGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: GGPGLDTRALVDRSL*LRLQTVCGDILRRN
Trigger: GTTCCTCCGAAGTATGTCCCCGCACACTGTTTGCAGCCTCAGCCACAGTGACCTGTCCACGAGGGCTCGGGTGTCTAGCCCTGGTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 90 bp GTCTTGTGCAGGCTGTGGGGTCCCGGTGCATGCTGGGAAGCTTGCTaGACTCTGGTACCGGAAGGAGATGCATCCCAGATCTGTAGAGGC +
Preference number: 5 (lower is better)
Translates to: VLCRLWGPGACWEAC*TLVPEGDASQICRG
Trigger: GCCTCTACAGATCTGGGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGGCAAGCCAGGGGCCCTaGCTTGGAAGACTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVASQGP*LGRLFQ
Trigger: TTGGAAGAGTCTTCCAAGCAAGGGCCCCTGGCTTGC...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 90 bp GGATCAGCAGCTCCTGGGCGTCCTCGGGGTCCCGGTAGGAGGTGTTaGAGAAGACAAGAGCATCTTTCGCCAGGACTGCATCACACACCT +
Preference number: 5 (lower is better)
Translates to: GSAAPGRPRGPGRRC*RRQEHLSPGLHHTP
Trigger: AGGTGTGTGATGCAGTCCTGGCGAAAGATGCTCTTGTCTTCTTCAACACCTCCTACCGGGACCCCGAGGACGCCCAGGAGCTGCTGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 90 bp GCAGTCTTGTGCAGGCTGTGGGGTCCCGGTGCATGCTGGGAAGCTTaGTGCACTCTGGTACCGGAAGGAGATGCATCCCAGATCTGTAGA +
Preference number: 5 (lower is better)
Translates to: AVLCRLWGPGACWEA*CTLVPEGDASQICR
Trigger: TCTACAGATCTGGGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp CAAACTTGCGCTCTGAAAGGTAGGCCATGCCAGCTGCCACCTGCCTaGCAATGCAGAGCTGTTCTGCACAGGACAGTGGTGGAGGACCAG +
Preference number: 5 (lower is better)
Translates to: QTCALKGRPCQLPPA*QCRAVLHRTVVEDQ
Trigger: CTGGTCCTCCACCACTGTCCTGTGCAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAGAGCGCAAGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp CCCACCGTTCCCTCTGCTCTCTCGCACATGCGCTGCAGGATCCTGTaGATACTGCAGAAGCTGGGTCTATCAGCAGGCAGCTTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: PTVPSALSHMRCRIL*ILQKLGLSAGSLLQ
Trigger: TTGGAGCAAGCTGCCTGCTGATAGACCCAGCTTCTGCAGTATCCACAGGATCCTGCAGCGCATGTGCGAGAGAGCAGAGGGAACGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTCCAGGGCTGCACTCTaGGAAGAGGTGGTTACACAG +
Preference number: 5 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVSRAAL*EEVVTQ
Trigger: CTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGGA...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 90 bp AGAAGCTGGGTCTATCAGCAGGCAGCTTGCTCCAACACAGGCGCATaGGGTTGTACAGTTCCAAGGGGCAGTTCTCAGGGCAGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: RSWVYQQAACSNTGA*GCTVPRGSSQGRRG
Trigger: TCCTCGCCTGCCCTGAGAACTGCCCCTTGGAACTGTACAACCTCATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAGACCCAGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 90 bp GGGAATGCTAAATATGGCAGTCTTGTGCAGGCTGTGGGGTCCCGGTaGATGCTGGGAAGCTTGCTGCACTCTGGTACCGGAAGGAGATGC +
Preference number: 5 (lower is better)
Translates to: GNAKYGSLVQAVGSR*MLGSLLHSGTGRRC
Trigger: GCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGCCATATTTAGCATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS CCA 90 bp CTAAATATGGCAGTCTTGTGCAGGCTGTGGGGTCCCGGTGCATGCTaGGAAGCTTGCTGCACTCTGGTACCGGAAGGAGATGCATCCCAG +
Preference number: 5 (lower is better)
Translates to: LNMAVLCRLWGPGAC*EACCTLVPEGDASQ
Trigger: CTGGGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGCCATATTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGAGAGCATTGTCCCCCTaGATCCAGGACACAGATGGT +
Preference number: 5 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVRALSP*IQDTDG
Trigger: ACCATCTGTGTCCTGGATCAAGGGGGACAATGCTCT...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 90 bp CTCTGCCATGAGGGCCGCCTCCCTCTGAAAGTCCGCTTGCATGTCTaGAGAGGCCTCTTCCTTAAGCATCTTCACGGCCACCATAGTGAA +
Preference number: 5 (lower is better)
Translates to: LCHEGRLPLKVRLHV*RGLFLKHLHGHHSE
Trigger: TTCACTATGGTGGCCGTGAAGATGCTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCTCATGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 90 bp ATGCTAAATATGGCAGTCTTGTGCAGGCTGTGGGGTCCCGGTGCATaGTGGGAAGCTTGCTGCACTCTGGTACCGGAAGGAGATGCATCC +
Preference number: 5 (lower is better)
Translates to: MLNMAVLCRLWGPGA*WEACCTLVPEGDAS
Trigger: GGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGCCATATTTAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS GCA 90 bp GCCTGGAGGACGTTATTGACGGGAATGCTAAATATGGCAGTCTTGTaGAGGCTGTGGGGTCCCGGTGCATGCTGGGAAGCTTGCTGCACT +
Preference number: 5 (lower is better)
Translates to: AWRTLLTGMLNMAVL*RLWGPGACWEACCT
Trigger: AGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGCCATATTTAGCATTCCCGTCAATAACGTCCTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS CCA 90 bp TTAGGATTCAGAAGGAGTGGCATCCTCTGGTACATGGGGTTGGGATaGAGCCTATCCAGCAGGAGCTCGGAAGGCAACGTGGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LGFRRSGILWYMGLG*SLSSRSSEGNVVRV
Trigger: GACCCTCACCACGTTGCCTTCCGAGCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTACCAGAGGATGCCACTCCTTCTGAATCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAACCTCTGAAAGTCCGCTaGCATGTCTGCAGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQPLKVR*HVCRGL
Trigger: GAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGG...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 90 bp GGGCACCACAACTCTCCACGGCTCCTCCCACTCCATTGTTGGCTATaGAGCAGTAGATGCCATCATCACTGTCTTCCACGCTCAGAATGG +
Preference number: 5 (lower is better)
Translates to: GHHNSPRLLPLHCWL*SSRCHHHCLPRSEW
Trigger: CCATTCTGAGCGTGGAAGACAGTGATGATGGCATCTACTGCTGCATAGCCAACAATGGAGTGGGAGGAGCCGTGGAGAGTTGTGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 90 bp AATCTAAATATGGCAGTCTTGTGCAGGCTGTGGGGTCCCGGTGCATaGTGGGAAGCTTGCTGCACTCTGGTACCGGAAGGAGATGCATCC +
Preference number: 5 (lower is better)
Translates to: NLNMAVLCRLWGPGA*WEACCTLVPEGDAS
Trigger: GGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGCCATATTTAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000179951.2
CDS CCA 90 bp CTTGCAGGGCACCACAACTCTCCACGGCTCCTCCCACTCCATTGTTaGCTATGCAGCAGTAGATGCCATCATCACTGTCTTCCACGCTCA +
Preference number: 5 (lower is better)
Translates to: LAGHHNSPRLLPLHC*LCSSRCHHHCLPRS
Trigger: TGAGCGTGGAAGACAGTGATGATGGCATCTACTGCTGCATAGCCAACAATGGAGTGGGAGGAGCCGTGGAGAGTTGTGGTGCCCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp ACGTTATTGACGGGAATGCTAAATATGGCAGTCTTGTGCAGGCTGTaGGGTCCCGGTGCATGCTGGGAAGCTTGCTGCACTCTGGTACCG +
Preference number: 5 (lower is better)
Translates to: TLLTGMLNMAVLCRL*GPGACWEACCTLVP
Trigger: CGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGCCATATTTAGCATTCCCGTCAATAACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS CCA 90 bp AGGAAGAGGTGGAGGCAGGCAGGTTTGGAATGTCCGCGCTCGGCCTaGAGGACGTTATTGACGGGAATGCTAAATATGGCAGTCTTGTGC +
Preference number: 5 (lower is better)
Translates to: RKRWRQAGLECPRSA*RTLLTGMLNMAVLC
Trigger: GCACAAGACTGCCATATTTAGCATTCCCGTCAATAACGTCCTCCAGGCCGAGCGCGGACATTCCAAACCTGCCTGCCTCCACCTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS-3UTR CAA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTTGCATGCTGGGAAGCTaGCTGCACTCTGGTACCGGA +
Preference number: 5 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFCMLGS*LHSGTG
Trigger: TCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCA...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTCTCTGGTACATGGGGTaGGGATGGAGCCTATCCAGC +
Preference number: 5 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFLWYMG*GWSLSS
Trigger: GCTGGATAGGCTCCATCCCAACCCCATGTACCAGAG...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 90 bp ACAATGTTGGGGTTGTCAAACTCTGCCATGAGGGCCGCCTCCCTCTaGAAGTCCGCTTGCATGTCTGCAGAGGCCTCTTCCTTAAGCATC +
Preference number: 5 (lower is better)
Translates to: TMLGLSNSAMRAASL*KSACMSAEASSLSI
Trigger: GATGCTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCCAACATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 90 bp AGTTCTCAGGGCAGGCGAGGATGTTGCCATCTCTCACATAGTAAATaGCCTCCTCGTGGGCCATTCCATAGTAGGGCTGCAGCCCATAGG +
Preference number: 5 (lower is better)
Translates to: SSQGRRGCCHLSHSK*PPRGPFHSRAAAHR
Trigger: CCTATGGGCTGCAGCCCTACTATGGAATGGCCCACGAGGAGGTCATTTACTATGTGAGAGATGGCAACATCCTCGCCTGCCCTGAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp TACTCCAGGCTGAGCAACTTAGGATTCAGAAGGAGTGGCATCCTCTaGTACATGGGGTTGGGATGGAGCCTATCCAGCAGGAGCTCGGAA +
Preference number: 5 (lower is better)
Translates to: YSRLSNLGFRRSGIL*YMGLGWSLSSRSSE
Trigger: TTCCGAGCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTACCAGAGGATGCCACTCCTTCTGAATCCTAAGTTGCTCAGCCTGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTGGGCCTTTCCTTCCATaGCCTGCCATTCCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFGPFLP*PAIPLH
Trigger: GTGCAAAGGAATGGCAGGCAATGGAAGGAAAGGCCC...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTCTCTGGTACATGGGGTaGGGATGGAGCCTATCCAGC +
Preference number: 5 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGLWYMG*GWSLSS
Trigger: GCTGGATAGGCTCCATCCCAACCCCATGTACCAGAG...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GGCCTCTGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGAAGAGTTTCACAATGTaGGGGTTGTCAAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: GLCGRVPPAHSLKRASWVKSFTM*GLSNSA
Trigger: GGCAGAGTTTGACAACCCCAACATTGTGAAACTCTT...CACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 90 bp TGCAGCAGTAGATGCCATCATCACTGTCTTCCACGCTCAGAATGGTaGGGAGCTGACCATTCTCCCGGATGCTGTAGCGGGTGTCAAACA +
Preference number: 5 (lower is better)
Translates to: CSSRCHHHCLPRSEW*GADHSPGCCSGCQT
Trigger: TGTTTGACACCCGCTACAGCATCCGGGAGAATGGTCAGCTCCTCACCATTCTGAGCGTGGAAGACAGTGATGATGGCATCTACTGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 90 bp ACACACCTAAGAGTTTCACAATGTTGGGGTTGTCAAACTCTGCCATaGGGGCCGCCTCCCTCTGAAAGTCCGCTTGCATGTCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: THLRVSQCWGCQTLP*GPPPSESPLACLQR
Trigger: CCTCTGCAGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCCAACATTGTGAAACTCTTAGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 90 bp CTCTGTCTTCCTCCACTTCCAGCTTCACCAGTTTGGAGTAAGCTGTaGCCAGGCTGTTTTTGGCCACACAGCGGTACTGTCCTGCATCTT +
Preference number: 5 (lower is better)
Translates to: LCLPPLPASPVWSKL*PGCFWPHSGTVLHL
Trigger: AAGATGCAGGACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGGAAGTGGAGGAAGACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp ATTCCTCGGATACTCCAGGCTGAGCAACTTAGGATTCAGAAGGAGTaGCATCCTCTGGTACATGGGGTTGGGATGGAGCCTATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: IPRILQAEQLRIQKE*HPLVHGVGMEPIQQ
Trigger: CTGCTGGATAGGCTCCATCCCAACCCCATGTACCAGAGGATGCCACTCCTTCTGAATCCTAAGTTGCTCAGCCTGGAGTATCCGAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTGGGCCTTTCCTTCCATaGCCTGCCATTCCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGGPFLP*PAIPLH
Trigger: GTGCAAAGGAATGGCAGGCAATGGAAGGAAAGGCCC...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GTCCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCTTCACAATGTTGGGGTaGTCAAACTCTGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: VPVRERSYLLSSFLACISFTMLG*SNSAMR
Trigger: CCTCATGGCAGAGTTTGACAACCCCAACATTGTGAA...GGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp CACGCAGGATTCTTGCAAAAACCTCCACTTCCAGCTTCACCAGTTTaGAGTAAGCTGTGCCCAGGCTGTTTTTGGCCACACAGCGGTACT +
Preference number: 5 (lower is better)
Translates to: HAGFLQKPPLPASPV*SKLCPGCFWPHSGT
Trigger: AGTACCGCTGTGTGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGGAAGTGGAGGTTTTTGCAAGAATCCTGCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000102893.10
CDS-3UTR CAA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTAGGTTTCATCTTCACTaGCAGGGCACCACAACTCTC +
Preference number: 5 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFRFHLH*QGTTTL
Trigger: GAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACCT...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTCTGCGGTAGAGCATTGTCCCCCTaGATCCAGGACACAGATGGT +
Preference number: 5 (lower is better)
Translates to: HVMSELNSSYLVLHGLCGRALSP*IQDTDG
Trigger: ACCATCTGTGTCCTGGATCAAGGGGGACAATGCTCT...ACCGCAGAGGCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAATTGCCTGCCATTCCTTaGCACAGAAGAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQLPAIP*HRRAPL
Trigger: TAAAGGAGCTCTTCTGTGCAAAGGAATGGCAGGCAA...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCGCAAGCCAGGGGCCCTaGCTTGGAAGACTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: INWHVMSELNSSYLVLHGASQGP*LGRLFQ
Trigger: TTGGAAGAGTCTTCCAAGCAAGGGCCCCTGGCTTGC...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CCCTGTGAGGGAGAGGAGCTACCTGCTGTCCTCTTTCCTAGCCTGTATCTCCAATTCACAATGTTGGGGTaGTCAAACTCTGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: PCEGEELPAVLFPSLYLQFTMLG*SNSAMR
Trigger: CCTCATGGCAGAGTTTGACAACCCCAACATTGTGAA...TTGGAGATACAGGCTAGGAAAGAGGACAGCAGGTAGCTCCTCTCCCTCACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCCTATCAGCAGGCAGCTaGCTCCAACACAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: INWHVMSELNSSYLVLHGLSAGS*LQHRRM
Trigger: CATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAG...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 90 bp TTGCAAAAACCTCCACTTCCAGCTTCACCAGTTTGGAGTAAGCTGTaGCCAGGCTGTTTTTGGCCACACAGCGGTACTGTCCTGCATCTT +
Preference number: 5 (lower is better)
Translates to: LQKPPLPASPVWSKL*PGCFWPHSGTVLHL
Trigger: AAGATGCAGGACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGGAAGTGGAGGTTTTTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000102893.10
CDS GCA 90 bp AAACCACGGAGGAGGGACTGCTATGCTGACAGTGGCTGCAGCCTTTaGGGTACTGAACTTTTCTCCGTGCTTATTGGTAGCTATGCATGT +
Preference number: 5 (lower is better)
Translates to: KPRRRDCYADSGCSL*GTELFSVLIGSYAC
Trigger: ACATGCATAGCTACCAATAAGCACGGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACTGTCAGCATAGCAGTCCCTCCTCCGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098057.10
CDS GCA 90 bp ATCCATAGAAAACCACGGAGGAGGGACTGCTATGCTGACAGTGGCTaGAGCCTTTGCGGTACTGAACTTTTCTCCGTGCTTATTGGTAGC +
Preference number: 5 (lower is better)
Translates to: IHRKPRRRDCYADSG*SLCGTELFSVLIGS
Trigger: GCTACCAATAAGCACGGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACTGTCAGCATAGCAGTCCCTCCTCCGTGGTTTTCTATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098057.10
CDS-3UTR CAA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTTTGCCTGCCATTCCTTaGCACAGAAGAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFLPAIP*HRRAPL
Trigger: TAAAGGAGCTCTTCTGTGCAAAGGAATGGCAGGCAA...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCGGGCCTTTCCTTCCATaGCCTGCCATTCCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: INWHVMSELNSSYLVLHGGPFLP*PAIPLH
Trigger: GTGCAAAGGAATGGCAGGCAATGGAAGGAAAGGCCC...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTCTCTGGTACATGGGGTaGGGATGGAGCCTATCCAGC +
Preference number: 5 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTLWYMG*GWSLSS
Trigger: GCTGGATAGGCTCCATCCCAACCCCATGTACCAGAG...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp CTTCCAGCTTCACCAGTTTGGAGTAAGCTGTGCCCAGGCTGTTTTTaGCCACACAGCGGTACTGTCCTGCATCTTCCTTTTGCACATTAT +
Preference number: 5 (lower is better)
Translates to: LPASPVWSKLCPGCF*PHSGTVLHLPFAHY
Trigger: ATAATGTGCAAAAGGAAGATGCAGGACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACGGGCCTTTCCTTCCATaGCCTGCCATTCCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDGPFLP*PAIPLH
Trigger: GTGCAAAGGAATGGCAGGCAATGGAAGGAAAGGCCC...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTTGCATGCTGGGAAGCTaGCTGCACTCTGGTACCGGA +
Preference number: 5 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCCMLGS*LHSGTG
Trigger: TCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCA...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGCAAGCCAGGGGCCCTaGCTTGGAAGACTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLASQGP*LGRLFQ
Trigger: TTGGAAGAGTCTTCCAAGCAAGGGCCCCTGGCTTGC...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTCCTCTGAAAGTCCGCTaGCATGTCTGCAGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLPLKVR*HVCRGL
Trigger: GAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGG...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCCTCTGAAAGTCCGCTaGCATGTCTGCAGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCPLKVR*HVCRGL
Trigger: GAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGG...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp TGCGGTAGGGTTCCTCCAGCTCACAGTCTGAAAAGAGCCTCCTGGGTGTTGTTTAAGAGTTTCACAATGTaGGGGTTGTCAAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: CGRVPPAHSLKRASWVLFKSFTM*GLSNSA
Trigger: GGCAGAGTTTGACAACCCCAACATTGTGAAACTCTT...AAACAACACCCAGGAGGCTCTTTTCAGACTGTGAGCTGGAGGAACCCTACCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 90 bp TGGTCCAAGAAATCTCGGGCTGAGGGTAGGATTCCACGGCACACATaGAAGTCGCTACTTCTTCAACCAAGGCATCTACAGTTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: WSKKSRAEGRIPRHT*KSLLLQPRHLQFQE
Trigger: CTCTTGAAACTGTAGATGCCTTGGTTGAAGAAGTAGCGACTTTCATGTGTGCCGTGGAATCCTACCCTCAGCCCGAGATTTCTTGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 90 bp GGATGCCTATTGCTGTGCAGCGTAGGGTTACAAAGGAACCAAAGGTaGCATTGTGGGATTCAGGAGCACGCAGGATTCTTGCAAAAACCT +
Preference number: 5 (lower is better)
Translates to: GCLLLCSVGLQRNQR*HCGIQEHAGFLQKP
Trigger: AGGTTTTTGCAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTCCTTTGTAACCCTACGCTGCACAGCAATAGGCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000102893.10
CDS CCA 90 bp ATTGCTGTGCAGCGTAGGGTTACAAAGGAACCAAAGGTGACATTGTaGGATTCAGGAGCACGCAGGATTCTTGCAAAAACCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: IAVQRRVTKEPKVTL*DSGARRILAKTSTS
Trigger: GGAAGTGGAGGTTTTTGCAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTCCTTTGTAACCCTACGCTGCACAGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000102893.10
CDS-3UTR CAA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTTCCAGGGCTGCACTCTaGGAAGAGGTGGTTACACAG +
Preference number: 5 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLSRAAL*EEVVTQ
Trigger: CTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGGA...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCTGCATGCTGGGAAGCTaGCTGCACTCTGGTACCGGA +
Preference number: 5 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPCMLGS*LHSGTG
Trigger: TCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCA...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCCCTCTGAAAGTCCGCTaGCATGTCTGCAGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPPLKVR*HVCRGL
Trigger: GAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGG...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACTATCAGCAGGCAGCTaGCTCCAACACAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: TTLHILCKEELNNSKTLPLSAGS*LQHRRM
Trigger: CATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAG...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 90 bp GGATGCCTATTGCTGTGCAGCGTAGGGTTACAAAGGAACCAAAGGTaGCATTGTGGGATTCAGGAGCACGCAGGATTCTTGCAAAAACTT +
Preference number: 5 (lower is better)
Translates to: GCLLLCSVGLQRNQR*HCGIQEHAGFLQKL
Trigger: AAGTTTTTGCAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTCCTTTGTAACCCTACGCTGCACAGCAATAGGCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp ATTGCTGTGCAGCGTAGGGTTACAAAGGAACCAAAGGTGACATTGTaGGATTCAGGAGCACGCAGGATTCTTGCAAAAACTTTAGCGTCC +
Preference number: 5 (lower is better)
Translates to: IAVQRRVTKEPKVTL*DSGARRILAKTLAS
Trigger: GGACGCTAAAGTTTTTGCAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTCCTTTGTAACCCTACGCTGCACAGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTAGAGCATTGTCCCCCTaGATCCAGGACACAGATGGT +
Preference number: 5 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCRALSP*IQDTDG
Trigger: ACCATCTGTGTCCTGGATCAAGGGGGACAATGCTCT...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCATCCAGGGCTGCACTCTaGGAAGAGGTGGTTACACAG +
Preference number: 5 (lower is better)
Translates to: TTLHILCKEELNNSKTLPSRAAL*EEVVTQ
Trigger: CTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGGA...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCTCCAGGGCTGCACTCTaGGAAGAGGTGGTTACACAG +
Preference number: 5 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPSRAAL*EEVVTQ
Trigger: CTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGGA...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ATCAACTGGCACGTGATGTCTGAGTTAAACTCCTCCTATCTGGTCTTACACGGCTTGCCTGCCATTCCTTaGCACAGAAGAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: INWHVMSELNSSYLVLHGLPAIP*HRRAPL
Trigger: TAAAGGAGCTCTTCTGTGCAAAGGAATGGCAGGCAA...GCCGTGTAAGACCAGATAGGAGGAGTTTAACTCAGACATCACGTGCCAGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAGGGCCTTTCCTTCCATaGCCTGCCATTCCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: TTLHILCKEELNNSKTLPGPFLP*PAIPLH
Trigger: GTGCAAAGGAATGGCAGGCAATGGAAGGAAAGGCCC...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCCTCTGGTACATGGGGTaGGGATGGAGCCTATCCAGC +
Preference number: 5 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCLWYMG*GWSLSS
Trigger: GCTGGATAGGCTCCATCCCAACCCCATGTACCAGAG...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTAGCAAGCCAGGGGCCCTaGCTTGGAAGACTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLASQGP*LGRLFQ
Trigger: TTGGAAGAGTCTTCCAAGCAAGGGCCCCTGGCTTGC...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCCTATCAGCAGGCAGCTaGCTCCAACACAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCLSAGS*LQHRRM
Trigger: CATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAG...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACTATCAGCAGGCAGCTaGCTCCAACACAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLLSAGS*LQHRRM
Trigger: CATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAG...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 90 bp GGACACAGATGGTTTGGGGTTACCCATCGTAGTGCACGGCAGAACTaGCTTCAATCCCTCTATTATTTTTACATTAATGGGAGGACGAGT +
Preference number: 5 (lower is better)
Translates to: GHRWFGVTHRSARQN*LQSLYYFYINGRTS
Trigger: ACTCGTCCTCCCATTAATGTAAAAATAATAGAGGGATTGAAGGCAGTTCTGCCGTGCACTACGATGGGTAACCCCAAACCATCTGTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTAGGTTTCATCTTCACTaGCAGGGCACCACAACTCTC +
Preference number: 5 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLRFHLH*QGTTTL
Trigger: GAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACCT...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTAGGTTTCATCTTCACTaGCAGGGCACCACAACTCTC +
Preference number: 5 (lower is better)
Translates to: VTYSVQGRTKQQQDPATCRFHLH*QGTTTL
Trigger: GAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACCT...ACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCAGAGCATTGTCCCCCTaGATCCAGGACACAGATGGT +
Preference number: 5 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPRALSP*IQDTDG
Trigger: ACCATCTGTGTCCTGGATCAAGGGGGACAATGCTCT...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp TATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTTGCCTGCCATTCCTTaGCACAGAAGAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: YSVQGRTKQQQDPATCLDLPAIP*HRRAPL
Trigger: TAAAGGAGCTCTTCTGTGCAAAGGAATGGCAGGCAA...GTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTTTGCCTGCCATTCCTTaGCACAGAAGAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTLPAIP*HRRAPL
Trigger: TAAAGGAGCTCTTCTGTGCAAAGGAATGGCAGGCAA...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTTTCACAATGTTGGGGTaGTCAAACTCTGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTFTMLG*SNSAMR
Trigger: CCTCATGGCAGAGTTTGACAACCCCAACATTGTGAA...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 90 bp TTGGCCACACAGCGGTACTGTCCTGCATCTTCCTTTTGCACATTATaGATCCTTAAGCTCCCAGATTCAAGAACTGCGATTCTGGAATTT +
Preference number: 5 (lower is better)
Translates to: LATQRYCPASSFCTL*ILKLPDSRTAILEF
Trigger: AAATTCCAGAATCGCAGTTCTTGAATCTGGGAGCTTAAGGATCCATAATGTGCAAAAGGAAGATGCAGGACAGTACCGCTGTGTGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAAGGTTTCATCTTCACTaGCAGGGCACCACAACTCTC +
Preference number: 5 (lower is better)
Translates to: TTLHILCKEELNNSKTLPRFHLH*QGTTTL
Trigger: GAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACCT...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTAAGAGCATTGTCCCCCTaGATCCAGGACACAGATGGT +
Preference number: 5 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLRALSP*IQDTDG
Trigger: ACCATCTGTGTCCTGGATCAAGGGGGACAATGCTCT...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCAGAGCATTGTCCCCCTaGATCCAGGACACAGATGGT +
Preference number: 5 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCRALSP*IQDTDG
Trigger: ACCATCTGTGTCCTGGATCAAGGGGGACAATGCTCT...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTGACTAAGAGTTTCACAATGTaGGGGTTGTCAAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: ILCKEELNNSKTLPRVLTKSFTM*GLSNSA
Trigger: GGCAGAGTTTGACAACCCCAACATTGTGAAACTCTT...AGTCAAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACATGCATGCTGGGAAGCTaGCTGCACTCTGGTACCGGA +
Preference number: 5 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTCMLGS*LHSGTG
Trigger: TCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCA...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACTGCATGCTGGGAAGCTaGCTGCACTCTGGTACCGGA +
Preference number: 5 (lower is better)
Translates to: QFQNANTTLHILCKEELNCMLGS*LHSGTG
Trigger: TCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCA...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGACTCTGGTACATGGGGTaGGGATGGAGCCTATCCAGC +
Preference number: 5 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRLWYMG*GWSLSS
Trigger: GCTGGATAGGCTCCATCCCAACCCCATGTACCAGAG...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACGCAAGCCAGGGGCCCTaGCTTGGAAGACTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: QFQNANTTLHILCKEELNASQGP*LGRLFQ
Trigger: TTGGAAGAGTCTTCCAAGCAAGGGCCCCTGGCTTGC...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAGCAAGCCAGGGGCCCTaGCTTGGAAGACTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRASQGP*LGRLFQ
Trigger: TTGGAAGAGTCTTCCAAGCAAGGGCCCCTGGCTTGC...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGACCTCTGAAAGTCCGCTaGCATGTCTGCAGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRPLKVR*HVCRGL
Trigger: GAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGG...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACCCTCTGAAAGTCCGCTaGCATGTCTGCAGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNPLKVR*HVCRGL
Trigger: GAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGG...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACACCTCTGAAAGTCCGCTaGCATGTCTGCAGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTPLKVR*HVCRGL
Trigger: GAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGG...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp GACACATTGCTTTTGCAATGGGCAGGATGTCTTCTGTTAAAAATGAAGTTGCCCTTCACAATGTTGGGGTaGTCAAACTCTGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: DTLLLQWAGCLLLKMKLPFTMLG*SNSAMR
Trigger: CCTCATGGCAGAGTTTGACAACCCCAACATTGTGAA...GGGCAACTTCATTTTTAACAGAAGACATCCTGCCCATTGCAAAAGCAATGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCACGTGTCTTAAGAGTTTCACAATGTaGGGGTTGTCAAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: TYSVQGRTKQQQDPATCLKSFTM*GLSNSA
Trigger: GGCAGAGTTTGACAACCCCAACATTGTGAAACTCTT...AAGACACGTGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACCTATCAGCAGGCAGCTaGCTCCAACACAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNLSAGS*LQHRRM
Trigger: CATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAG...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACACTATCAGCAGGCAGCTaGCTCCAACACAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTLSAGS*LQHRRM
Trigger: CATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAG...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACCTATCAGCAGGCAGCTaGCTCCAACACAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: QFQNANTTLHILCKEELNLSAGS*LQHRRM
Trigger: CATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAG...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACTCCAGGGCTGCACTCTaGGAAGAGGTGGTTACACAG +
Preference number: 5 (lower is better)
Translates to: QFQNANTTLHILCKEELNSRAAL*EEVVTQ
Trigger: CTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGGA...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CTTCTGTTAAAAATGAAGTTGCCCATCCAGTTTTGGATTCAACCTAAGCACTGCTTGCCTGCCATTCCTTaGCACAGAAGAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: LLLKMKLPIQFWIQPKHCLPAIP*HRRAPL
Trigger: TAAAGGAGCTCTTCTGTGCAAAGGAATGGCAGGCAA...GCAGTGCTTAGGTTGAATCCAAAACTGGATGGGCAACTTCATTTTTAACAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACGGGCCTTTCCTTCCATaGCCTGCCATTCCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: QFQNANTTLHILCKEELNGPFLP*PAIPLH
Trigger: GTGCAAAGGAATGGCAGGCAATGGAAGGAAAGGCCC...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTATTCACAATGTTGGGGTaGTCAAACTCTGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLFTMLG*SNSAMR
Trigger: CCTCATGGCAGAGTTTGACAACCCCAACATTGTGAA...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAACAGCAAGACCCTGCCAAAGAGTTTCACAATGTaGGGGTTGTCAAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: TTLHILCKEELNNSKTLPKSFTM*GLSNSA
Trigger: GGCAGAGTTTGACAACCCCAACATTGTGAAACTCTT...TGGCAGGGTCTTGCTGTTGTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp AGATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAAGAGCATTGTCCCCCTaGATCCAGGACACAGATGGT +
Preference number: 5 (lower is better)
Translates to: RYSIPECKYNVTYSVQGRRALSP*IQDTDG
Trigger: ACCATCTGTGTCCTGGATCAAGGGGGACAATGCTCT...TCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ACGTGTCTTGACTGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTAAAGAGTTTCACAATGTaGGGGTTGTCAAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: TCLDWWKKGFLSLVFSPLKSFTM*GLSNSA
Trigger: GGCAGAGTTTGACAACCCCAACATTGTGAAACTCTT...TAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCAGTCAAGACACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACAGGTTTCATCTTCACTaGCAGGGCACCACAACTCTC +
Preference number: 5 (lower is better)
Translates to: QFQNANTTLHILCKEELNRFHLH*QGTTTL
Trigger: GAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACCT...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp CAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTAAACTTCACAATGTTGGGGTaGTCAAACTCTGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: QFQNANTTLHILCKEELNFTMLG*SNSAMR
Trigger: CCTCATGGCAGAGTTTGACAACCCCAACATTGTGAA...GTTTAGTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp ATACTCAATTCCAGAATGCAAATACAACGTTACATATTCTGTGCAAGGAAGAACTTCACAATGTTGGGGTaGTCAAACTCTGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: ILNSRMQIQRYIFCARKNFTMLG*SNSAMR
Trigger: CCTCATGGCAGAGTTTGACAACCCCAACATTGTGAA...GTTCTTCCTTGCACAGAATATGTAACGTTGTATTTGCATTCTGGAATTGAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS-3UTR CAA 90 bp TGGTGGAAGAAGGGATTCCTATCTTTAGTTTTCAGTCCTTTACCTAAATATACAAAGAGTTTCACAATGTaGGGGTTGTCAAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: WWKKGFLSLVFSPLPKYTKSFTM*GLSNSA
Trigger: GGCAGAGTTTGACAACCCCAACATTGTGAAACTCTT...TGTATATTTAGGTAAAGGACTGAAAACTAAAGATAGGAATCCCTTCTTCCACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp AGTGGACTCACAGCCTTCAGCTCATTCCACGCAGTGTaGATCAGCAGCTCCTGGGCGTCCTCGGGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: SGLTAFSSFHAV*ISSSWASSGSR
Trigger: CCGGGACCCCGAGGACGCCCAGGAGCTGCTGATCCACACTGCGTGGAATGAGCTGAAGGCTGTGAGTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 72 bp TGCAGGCTGTGGGGTCCCGGTGCATGCTGGGAAGCTTaGTGCACTCTGGTACCGGAAGGAGATGCATCCCAG +
Preference number: 6 (lower is better)
Translates to: CRLWGPGACWEA*CTLVPEGDASQ
Trigger: CTGGGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 72 bp GTGCAGGCTGTGGGGTCCCGGTGCATGCTGGGAAGCTaGCTGCACTCTGGTACCGGAAGGAGATGCATCCCA +
Preference number: 6 (lower is better)
Translates to: VQAVGSRCMLGS*LHSGTGRRCIP
Trigger: TGGGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 72 bp AGGCTGTGGGGTCCCGGTGCATGCTGGGAAGCTTGCTaGACTCTGGTACCGGAAGGAGATGCATCCCAGATC +
Preference number: 6 (lower is better)
Translates to: RLWGPGACWEAC*TLVPEGDASQI
Trigger: GATCTGGGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp GCAGTCTTGTGCAGGCTGTGGGGTCCCGGTGCATGCTaGGAAGCTTGCTGCACTCTGGTACCGGAAGGAGAT +
Preference number: 6 (lower is better)
Translates to: AVLCRLWGPGAC*EACCTLVPEGD
Trigger: ATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp GGGCTAGACACCCGAGCCCTCGTGGACAGGTCACTGTaGCTGAGGCTGCAAACAGTGTGCGGGGACATACTT +
Preference number: 6 (lower is better)
Translates to: GLDTRALVDRSL*LRLQTVCGDIL
Trigger: AAGTATGTCCCCGCACACTGTTTGCAGCCTCAGCCACAGTGACCTGTCCACGAGGGCTCGGGTGTCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 72 bp GCGAGACGGCAAAGGAAGAGGTGGAGGCAGGCAGGTTaGGAATGTCCGCGCTCGGCCTGGAGGACGTTATTG +
Preference number: 6 (lower is better)
Translates to: ARRQRKRWRQAG*ECPRSAWRTLL
Trigger: CAATAACGTCCTCCAGGCCGAGCGCGGACATTCCAAACCTGCCTGCCTCCACCTCTTCCTTTGCCGTCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 90 bp AGTACGCAGGCGAGACGGCAAAGGAAGAGGTGGAGGCAGGCAGGTTaGGAATGTCCGCGCTCGGCCTGGAGGACGTTATTGACGGGAATG +
Preference number: 6 (lower is better)
Translates to: STQARRQRKRWRQAG*ECPRSAWRTLLTGM
Trigger: CATTCCCGTCAATAACGTCCTCCAGGCCGAGCGCGGACATTCCAAACCTGCCTGCCTCCACCTCTTCCTTTGCCGTCTCGCCTGCGTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 72 bp GCTCCTGGGCGTCCTCGGGGTCCCGGTAGGAGGTGTTaGAGAAGACAAGAGCATCTTTCGCCAGGACTGCAT +
Preference number: 6 (lower is better)
Translates to: APGRPRGPGRRC*RRQEHLSPGLH
Trigger: ATGCAGTCCTGGCGAAAGATGCTCTTGTCTTCTTCAACACCTCCTACCGGGACCCCGAGGACGCCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 72 bp GGGTTGTCAAACTCTGCCATGAGGGCCGCCTCCCTCTaGAAGTCCGCTTGCATGTCTGCAGAGGCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: GLSNSAMRAASL*KSACMSAEASS
Trigger: GGAAGAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 72 bp GAGGGCCGCCTCCCTCTGAAAGTCCGCTTGCATGTCTaGAGAGGCCTCTTCCTTAAGCATCTTCACGGCCAC +
Preference number: 6 (lower is better)
Translates to: EGRLPLKVRLHV*RGLFLKHLHGH
Trigger: GTGGCCGTGAAGATGCTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 72 bp CCCGGTGGACAAACTTGCGCTCTGAAAGGTAGGCCATaGCAGCTGCCACCTGCCTGGCAATGCAGAGCTGTT +
Preference number: 6 (lower is better)
Translates to: PGGQTCALKGRP*QLPPAWQCRAV
Trigger: AACAGCTCTGCATTGCCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAGAGCGCAAGTTTGTCCACCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp GGGGTCCCGGTGCATGCTGGGAAGCTTGCTGCACTCTaGTACCGGAAGGAGATGCATCCCAGATCTGTAGAG +
Preference number: 6 (lower is better)
Translates to: GVPVHAGKLAAL*YRKEMHPRSVE
Trigger: CTCTACAGATCTGGGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp GCTCTGAAAGGTAGGCCATGCCAGCTGCCACCTGCCTaGCAATGCAGAGCTGTTCTGCACAGGACAGTGGTG +
Preference number: 6 (lower is better)
Translates to: ALKGRPCQLPPA*QCRAVLHRTVV
Trigger: CACCACTGTCCTGTGCAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp CCCTCTGCTCTCTCGCACATGCGCTGCAGGATCCTGTaGATACTGCAGAAGCTGGGTCTATCAGCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: PSALSHMRCRIL*ILQKLGLSAGS
Trigger: GCTGCCTGCTGATAGACCCAGCTTCTGCAGTATCCACAGGATCCTGCAGCGCATGTGCGAGAGAGCAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 72 bp GGGCATGGGAGTAGGTACCACTCCAGGGCTGCACTCTaGGAAGAGGTGGTTACACAGCAGAGCCTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GHGSRYHSRAAL*EEVVTQQSLSS
Trigger: GCTGCTGAGGCTCTGCTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGGAGTGGTACCTACTCCCATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 90 bp TCTGCAAATGGGCATGGGAGTAGGTACCACTCCAGGGCTGCACTCTaGGAAGAGGTGGTTACACAGCAGAGCCTCAGCAGCTGGCCGGCA +
Preference number: 6 (lower is better)
Translates to: SANGHGSRYHSRAAL*EEVVTQQSLSSWPA
Trigger: TGCCGGCCAGCTGCTGAGGCTCTGCTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGGAGTGGTACCTACTCCCATGCCCATTTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 90 bp GATGCATCCCAGATCTGTAGAGGCCCCGGTGGGCCTTTCCTTCCATaGCCTGCCATTCCTTTGCACAGAAGAGCTCCTTTACCGCCAGGC +
Preference number: 6 (lower is better)
Translates to: DASQICRGPGGPFLP*PAIPLHRRAPLPPG
Trigger: GCCTGGCGGTAAAGGAGCTCTTCTGTGCAAAGGAATGGCAGGCAATGGAAGGAAAGGCCCACCGGGGCCTCTACAGATCTGGGATGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 90 bp CTGGGTCTATCAGCAGGCAGCTTGCTCCAACACAGGCGCATGAGGTaGTACAGTTCCAAGGGGCAGTTCTCAGGGCAGGCGAGGATGTTG +
Preference number: 6 (lower is better)
Translates to: LGLSAGSLLQHRRMR*YSSKGQFSGQARML
Trigger: CAACATCCTCGCCTGCCCTGAGAACTGCCCCTTGGAACTGTACAACCTCATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 90 bp TCGGCCTGGAGGACGTTATTGACGGGAATGCTAAATATGGCAGTCTaGTGCAGGCTGTGGGGTCCCGGTGCATGCTGGGAAGCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: SAWRTLLTGMLNMAV*CRLWGPGACWEACC
Trigger: GCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGCCATATTTAGCATTCCCGTCAATAACGTCCTCCAGGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS GCA 72 bp ACACCCACCGTTCCCTCTGCTCTCTCGCACATGCGCTaGAGGATCCTGTGGATACTGCAGAAGCTGGGTCTA +
Preference number: 6 (lower is better)
Translates to: TPTVPSALSHMR*RILWILQKLGL
Trigger: TAGACCCAGCTTCTGCAGTATCCACAGGATCCTGCAGCGCATGTGCGAGAGAGCAGAGGGAACGGTGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp GGCATGGGAGTAGGTACCACTCCAGGGCTGCACTCTTaGAAGAGGTGGTTACACAGCAGAGCCTCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: GMGVGTTPGLHS*KRWLHSRASAA
Trigger: AGCTGCTGAGGCTCTGCTGTGTAACCACCTCTTCCAAGAGTGCAGCCCTGGAGTGGTACCTACTCCCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp AGAAGGAGTGGCATCCTCTGGTACATGGGGTTGGGATaGAGCCTATCCAGCAGGAGCTCGGAAGGCAACGTG +
Preference number: 6 (lower is better)
Translates to: RRSGILWYMGLG*SLSSRSSEGNV
Trigger: CACGTTGCCTTCCGAGCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTACCAGAGGATGCCACTCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 72 bp GGATTCAGAAGGAGTGGCATCCTCTGGTACATGGGGTaGGGATGGAGCCTATCCAGCAGGAGCTCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: GFRRSGILWYMG*GWSLSSRSSEG
Trigger: GCCTTCCGAGCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTACCAGAGGATGCCACTCCTTCTGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 90 bp GTTGTCAAACTCTGCCATGAGGGCCGCCTCCCTCTGAAAGTCCGCTaGCATGTCTGCAGAGGCCTCTTCCTTAAGCATCTTCACGGCCAC +
Preference number: 6 (lower is better)
Translates to: VVKLCHEGRLPLKVR*HVCRGLFLKHLHGH
Trigger: GTGGCCGTGAAGATGCTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 90 bp AGGCAGGCAGGTTTGGAATGTCCGCGCTCGGCCTGGAGGACGTTATaGACGGGAATGCTAAATATGGCAGTCTTGTGCAGGCTGTGGGGT +
Preference number: 6 (lower is better)
Translates to: RQAGLECPRSAWRTL*TGMLNMAVLCRLWG
Trigger: ACCCCACAGCCTGCACAAGACTGCCATATTTAGCATTCCCGTCAATAACGTCCTCCAGGCCGAGCGCGGACATTCCAAACCTGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS TCA 72 bp GTCTATCAGCAGGCAGCTTGCTCCAACACAGGCGCATaGGGTTGTACAGTTCCAAGGGGCAGTTCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: VYQQAACSNTGA*GCTVPRGSSQG
Trigger: GCCCTGAGAACTGCCCCTTGGAACTGTACAACCTCATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp GATTCAGAAGGAGTGGCATCCTCTGGTACATGGGGTTaGGATGGAGCCTATCCAGCAGGAGCTCGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: DSEGVASSGTWG*DGAYPAGARKA
Trigger: TGCCTTCCGAGCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTACCAGAGGATGCCACTCCTTCTGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp ACGGGAATGCTAAATATGGCAGTCTTGTGCAGGCTGTaGGGTCCCGGTGCATGCTGGGAAGCTTGCTGCACT +
Preference number: 6 (lower is better)
Translates to: TGMLNMAVLCRL*GPGACWEACCT
Trigger: AGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGCCATATTTAGCATTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS CAA 72 bp CTCTGCCATGAGGGCCGCCTCCCTCTGAAAGTCCGCTaGCATGTCTGCAGAGGCCTCTTCCTTAAGCATCTT +
Preference number: 6 (lower is better)
Translates to: LCHEGRLPLKVR*HVCRGLFLKHL
Trigger: AAGATGCTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCTCATGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 90 bp AGCAACTTAGGATTCAGAAGGAGTGGCATCCTCTGGTACATGGGGTaGGGATGGAGCCTATCCAGCAGGAGCTCGGAAGGCAACGTGGTG +
Preference number: 6 (lower is better)
Translates to: SNLGFRRSGILWYMG*GWSLSSRSSEGNVV
Trigger: CACCACGTTGCCTTCCGAGCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTACCAGAGGATGCCACTCCTTCTGAATCCTAAGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 72 bp AGATGCCATCATCACTGTCTTCCACGCTCAGAATGGTaGGGAGCTGACCATTCTCCCGGATGCTGTAGCGGG +
Preference number: 6 (lower is better)
Translates to: RCHHHCLPRSEW*GADHSPGCCSG
Trigger: CCCGCTACAGCATCCGGGAGAATGGTCAGCTCCTCACCATTCTGAGCGTGGAAGACAGTGATGATGGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 72 bp CCTCCACTTCCAGCTTCACCAGTTTGGAGTAAGCTGTaGCCAGGCTGTTTTTGGCCACACAGCGGTACTGTC +
Preference number: 6 (lower is better)
Translates to: PPLPASPVWSKL*PGCFWPHSGTV
Trigger: GACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGGAAGTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp CCTGAGAGCATTGTCCCCCTTGATCCAGGACACAGATaGTTTGGGGTTACCCATCGTAGTGCACGGCAGAAC +
Preference number: 6 (lower is better)
Translates to: PESIVPLDPGHR*FGVTHRSARQN
Trigger: GTTCTGCCGTGCACTACGATGGGTAACCCCAAACCATCTGTGTCCTGGATCAAGGGGGACAATGCTCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp TGGAGGCAGGCAGGTTTGGAATGTCCGCGCTCGGCCTaGAGGACGTTATTGACGGGAATGCTAAATATGGCA +
Preference number: 6 (lower is better)
Translates to: WRQAGLECPRSA*RTLLTGMLNMA
Trigger: TGCCATATTTAGCATTCCCGTCAATAACGTCCTCCAGGCCGAGCGCGGACATTCCAAACCTGCCTGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS TCA 72 bp GGCAGGCGAGGATGTTGCCATCTCTCACATAGTAAATaGCCTCCTCGTGGGCCATTCCATAGTAGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: GRRGCCHLSHSK*PPRGPFHSRAA
Trigger: TGCAGCCCTACTATGGAATGGCCCACGAGGAGGTCATTTACTATGTGAGAGATGGCAACATCCTCGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 72 bp AACTCTCCACGGCTCCTCCCACTCCATTGTTGGCTATaGAGCAGTAGATGCCATCATCACTGTCTTCCACGC +
Preference number: 6 (lower is better)
Translates to: NSPRLLPLHCWL*SSRCHHHCLPR
Trigger: GCGTGGAAGACAGTGATGATGGCATCTACTGCTGCATAGCCAACAATGGAGTGGGAGGAGCCGTGGAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 72 bp ACGTTATTGACGGGAATGCTAAATATGGCAGTCTTGTaGAGGCTGTGGGGTCCCGGTGCATGCTGGGAAGCT +
Preference number: 6 (lower is better)
Translates to: TLLTGMLNMAVL*RLWGPGACWEA
Trigger: AGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGCCATATTTAGCATTCCCGTCAATAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS GCA 72 bp AAACCACGGAGGAGGGACTGCTATGCTGACAGTGGCTaGAGCCTTTGCGGTACTGAACTTTTCTCCGTGCTT +
Preference number: 6 (lower is better)
Translates to: KPRRRDCYADSG*SLCGTELFSVL
Trigger: AAGCACGGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACTGTCAGCATAGCAGTCCCTCCTCCGTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098057.10
CDS CCA 72 bp CTGAGCAACTTAGGATTCAGAAGGAGTGGCATCCTCTaGTACATGGGGTTGGGATGGAGCCTATCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: LSNLGFRRSGIL*YMGLGWSLSSR
Trigger: CCTGCTGGATAGGCTCCATCCCAACCCCATGTACCAGAGGATGCCACTCCTTCTGAATCCTAAGTTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 72 bp TTCCCAACGGCACACACACCTAAGAGTTTCACAATGTaGGGGTTGTCAAACTCTGCCATGAGGGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: FPTAHTPKSFTM*GLSNSAMRAAS
Trigger: GGAGGCGGCCCTCATGGCAGAGTTTGACAACCCCAACATTGTGAAACTCTTAGGTGTGTGTGCCGTTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 72 bp TGGATACTGCAGAAGCTGGGTCTATCAGCAGGCAGCTaGCTCCAACACAGGCGCATGAGGTTGTACAGTTCC +
Preference number: 6 (lower is better)
Translates to: WILQKLGLSAGS*LQHRRMRLYSS
Trigger: GGAACTGTACAACCTCATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAGACCCAGCTTCTGCAGTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CAA 72 bp AGGACGTTATTGACGGGAATGCTAAATATGGCAGTCTaGTGCAGGCTGTGGGGTCCCGGTGCATGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: RTLLTGMLNMAV*CRLWGPGACWE
Trigger: TTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAGACTGCCATATTTAGCATTCCCGTCAATAACGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS CAA 72 bp GGTTTGGAATGTCCGCGCTCGGCCTGGAGGACGTTATaGACGGGAATGCTAAATATGGCAGTCTTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: GLECPRSAWRTL*TGMLNMAVLCR
Trigger: CCTGCACAAGACTGCCATATTTAGCATTCCCGTCAATAACGTCCTCCAGGCCGAGCGCGGACATTCCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
CDS TCA 72 bp AGAGTTTCACAATGTTGGGGTTGTCAAACTCTGCCATaGGGGCCGCCTCCCTCTGAAAGTCCGCTTGCATGT +
Preference number: 6 (lower is better)
Translates to: RVSQCWGCQTLP*GPPPSESPLAC
Trigger: ACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCCAACATTGTGAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp CACCACAACTCTCCACGGCTCCTCCCACTCCATTGTTaGCTATGCAGCAGTAGATGCCATCATCACTGTCTT +
Preference number: 6 (lower is better)
Translates to: HHNSPRLLPLHC*LCSSRCHHHCL
Trigger: AAGACAGTGATGATGGCATCTACTGCTGCATAGCCAACAATGGAGTGGGAGGAGCCGTGGAGAGTTGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp TGGAGGCAGGCAGGTTTGGAATGTCCGCGCTCGGCCTaGAGGACGTTATTGACGGGAATGTTGTTATGTTTT +
Preference number: 6 (lower is better)
Translates to: WRQAGLECPRSA*RTLLTGMLLCF
Trigger: AAAACATAACAACATTCCCGTCAATAACGTCCTCCAGGCCGAGCGCGGACATTCCAAACCTGCCTGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000179951.2
CDS CCA 72 bp ATACTCCAGGCTGAGCAACTTAGGATTCAGAAGGAGTaGCATCCTCTGGTACATGGGGTTGGGATGGAGCCT +
Preference number: 6 (lower is better)
Translates to: ILQAEQLRIQKE*HPLVHGVGMEP
Trigger: AGGCTCCATCCCAACCCCATGTACCAGAGGATGCCACTCCTTCTGAATCCTAAGTTGCTCAGCCTGGAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 72 bp TCTGTACTGGGCACAGTAGCCTTGGCTGTCTTTCTGTaGCTTACTGAAAGCTGCTATGCTGACAGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: SVLGTVALAVFL*LTESCYADSGC
Trigger: GCAGCCACTGTCAGCATAGCAGCTTTCAGTAAGTCACAGAAAGACAGCCAAGGCTACTGTGCCCAGTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098059.10
ENSMUST00000179951.2
CDS GCA 72 bp GAAAGAAGTATCCATAGAAAACCACGGAGGAGGGACTaGTATGCTGACAGTGGCTGCAGCCTTTGCGGTACT +
Preference number: 6 (lower is better)
Translates to: ERSIHRKPRRRD*YADSGCSLCGT
Trigger: AGTACCGCAAAGGCTGCAGCCACTGTCAGCATAGCAGTCCCTCCTCCGTGGTTTTCTATGGATACTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098057.10
CDS CCA 72 bp TCACCAGTTTGGAGTAAGCTGTGCCCAGGCTGTTTTTaGCCACACAGCGGTACTGTCCTGCATCTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: SPVWSKLCPGCF*PHSGTVLHLPF
Trigger: AAAAGGAAGATGCAGGACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAACTGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 72 bp AAATCTCGGGCTGAGGGTAGGATTCCACGGCACACATaGAAGTCGCTACTTCTTCAACCAAGGCATCTACAG +
Preference number: 6 (lower is better)
Translates to: KSRAEGRIPRHT*KSLLLQPRHLQ
Trigger: CTGTAGATGCCTTGGTTGAAGAAGTAGCGACTTTCATGTGTGCCGTGGAATCCTACCCTCAGCCCGAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 72 bp TTGCTGTGCAGCGTAGGGTTACAAAGGAACCAAAGGTaGCATTGTGGGATTCAGGAGCACGCAGGATTCTTG +
Preference number: 6 (lower is better)
Translates to: LLCSVGLQRNQR*HCGIQEHAGFL
Trigger: CAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTCCTTTGTAACCCTACGCTGCACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS GCA 72 bp AGGGATGGCGTCATTTCCATCAGCTTTGTAGTAGTCTaGGGAATAGATGTTCCTGGAGAGGCCAAAGTCTGC +
Preference number: 6 (lower is better)
Translates to: RDGVISISFVVV*GIDVPGEAKVC
Trigger: GCAGACTTTGGCCTCTCCAGGAACATCTATTCCGCAGACTACTACAAAGCTGATGGAAATGACGCCATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp TTCTTGCAAAAACCTCCACTTCCAGCTTCACCAGTTTaGAGTAAGCTGTGCCCAGGCTGTTTTTGGCCACAC +
Preference number: 6 (lower is better)
Translates to: FLQKPPLPASPV*SKLCPGCFWPH
Trigger: GTGTGGCCAAAAACAGCCTGGGCACAGCTTACTCCAAACTGGTGAAGCTGGAAGTGGAGGTTTTTGCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000102893.10
CDS CAA 90 bp CCTATTGCTGTGCAGCGTAGGGTTACAAAGGAACCAAAGGTGACATaGTGGGATTCAGGAGCACGCAGGATTCTTGCAAAAACCTCCACT +
Preference number: 6 (lower is better)
Translates to: PIAVQRRVTKEPKVT*WDSGARRILAKTST
Trigger: AGTGGAGGTTTTTGCAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTCCTTTGTAACCCTACGCTGCACAGCAATAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000102893.10
CDS CCA 72 bp CAGCGTAGGGTTACAAAGGAACCAAAGGTGACATTGTaGGATTCAGGAGCACGCAGGATTCTTGCAAAAACC +
Preference number: 6 (lower is better)
Translates to: QRRVTKEPKVTL*DSGARRILAKT
Trigger: GGTTTTTGCAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTCCTTTGTAACCCTACGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000102893.10
CDS CAA 90 bp CCTATTGCTGTGCAGCGTAGGGTTACAAAGGAACCAAAGGTGACATaGTGGGATTCAGGAGCACGCAGGATTCTTGCAAAAACTTTAGCG +
Preference number: 6 (lower is better)
Translates to: PIAVQRRVTKEPKVT*WDSGARRILAKTLA
Trigger: CGCTAAAGTTTTTGCAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTCCTTTGTAACCCTACGCTGCACAGCAATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 72 bp AAACAGTGTGCGGGGACATACTTCGGAGGAACTCATTaGGGTCACCATAGGCCATATATTCAAAGAGCAGAC +
Preference number: 6 (lower is better)
Translates to: KQCAGTYFGGTH*GHHRPYIQRAD
Trigger: GTCTGCTCTTTGAATATATGGCCTATGGTGACCTCAATGAGTTCCTCCGAAGTATGTCCCCGCACACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp CAGCGTAGGGTTACAAAGGAACCAAAGGTGACATTGTaGGATTCAGGAGCACGCAGGATTCTTGCAAAAACT +
Preference number: 6 (lower is better)
Translates to: QRRVTKEPKVTL*DSGARRILAKT
Trigger: AGTTTTTGCAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTCCTTTGTAACCCTACGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 72 bp GTAGAGTCCTGGCTTTGTGATGAAGAGCTGGAGTCTTaGGTCAATCACTCGGTCTTTCACACTCTCTTGAAT +
Preference number: 6 (lower is better)
Translates to: VESWLCDEELES*VNHSVFHTLLN
Trigger: ATTCAAGAGAGTGTGAAAGACCGAGTGATTGACTCAAGACTCCAGCTCTTCATCACAAAGCCAGGACTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS TCA 72 bp AGTCTTGAGTCAATCACTCGGTCTTTCACACTCTCTTaGATGGAACCTGAAGAAACAGCATTTCCGTTTTCA +
Preference number: 6 (lower is better)
Translates to: SLESITRSFTLS*MEPEETAFPFS
Trigger: TGAAAACGGAAATGCTGTTTCTTCAGGTTCCATTCAAGAGAGTGTGAAAGACCGAGTGATTGACTCAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2
CDS CCA 72 bp TTGAGTCAATCACTCGGTCTTTCACACTCTCTTGAATaGAACCTGAAGAAACAGCATTTCCGTTTTCAATCC +
Preference number: 6 (lower is better)
Translates to: LSQSLGLSHSLE*NLKKQHFRFQS
Trigger: GGATTGAAAACGGAAATGCTGTTTCTTCAGGTTCCATTCAAGAGAGTGTGAAAGACCGAGTGATTGACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000081919.12
ENSMUST00000084578.12
ENSMUST00000098057.10
ENSMUST00000098059.10
ENSMUST00000102893.10
ENSMUST00000177951.8
ENSMUST00000179951.2