Pregenerated sensors for MUP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066154Ensembl transcript IDs: ENSMUST00000084531.11, ENSMUST00000107472.8, ENSMUST00000107488.4
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTTCTCTGTGAGACAGGTGGAGAGCAGATCACAGACCTTGGCATaGGAGTCTGTATGGATAGGAAGGGATGATGCTGGAGTCCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: HFSVRQVESRSQTLA*ESVWIGRDDAGVLV Trigger: CACCAGGACTCCAGCATCATCCCTTCCTATCCATACAGACTCCCATGCCAAGGTCTGTGATCTGCTCTCCACCTGTCTCACAGAGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR-3UTR GCA 90 bp | TTGCACTTCTCTGTGAGACAGGTGGAGAGCAGATCACAGACCTTGGCATGGGAGGCTCTCATTGTATATTaGCCACCTGGAGGCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LHFSVRQVESRSQTLAWEALIVY*PPGGSG Trigger: GCCTGAGCCTCCAGGTGGGCAATATACAATGAGAGC...CTCCCATGCCAAGGTCTGTGATCTGCTCTCCACCTGTCTCACAGAGAAGTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR CAA 90 bp | GGATTGCACTTCTCTGTGAGACAGGTGGAGAGCAGATCACAGACCTaGGCATGGGAGTCTGTATGGATAGGAAGGGATGATGCTGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: GLHFSVRQVESRSQT*AWESVWIGRDDAGV Trigger: GACTCCAGCATCATCCCTTCCTATCCATACAGACTCCCATGCCAAGGTCTGTGATCTGCTCTCCACCTGTCTCACAGAGAAGTGCAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR-3UTR GCA 90 bp | ATCCTAGGTAACATGCTGGAGAGAACGGGATTGCACTTCTCTGTGAGACAGGTGGCTCTCATTGTATATTaGCCACCTGGAGGCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: ILGNMLERTGLHFSVRQVALIVY*PPGGSG Trigger: GCCTGAGCCTCCAGGTGGGCAATATACAATGAGAGC...CACCTGTCTCACAGAGAAGTGCAATCCCGTTCTCTCCAGCATGTTACCTAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR-3UTR CCA 90 bp | TCACAGACCTTGGCATGGGAGTCTGTATGGATAGGAAGGGATGATGCTGGAGTCGCAGATCACAGACCTTaGCATGGGAGTCTGTATGGA | + |
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Preference number: 2 (lower is better) Translates to: SQTLAWESVWIGRDDAGVADHRP*HGSLYG Trigger: TCCATACAGACTCCCATGCCAAGGTCTGTGATCTGC...GACTCCAGCATCATCCCTTCCTATCCATACAGACTCCCATGCCAAGGTCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGAGACAGGTGGAGAGCAGATCACAGACCTTGGCATGGGAGTCTGTATGGCTCAACACTCCTCCTTaGTCTCATTGTATATTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SVRQVESRSQTLAWESVWLNTPP*SHCILP Trigger: GGGCAATATACAATGAGAGCAAGGAGGAGTGTTGAG...CCATACAGACTCCCATGCCAAGGTCTGTGATCTGCTCTCCACCTGTCTCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107472.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCTAGGTAACATGCTGGAGAGAACGGGATTGCACTTCTCTGTGAGACAGGTGGCAGATCACAGACCTTaGCATGGGAGTCTGTATGGA | + |
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Preference number: 2 (lower is better) Translates to: ILGNMLERTGLHFSVRQVADHRP*HGSLYG Trigger: TCCATACAGACTCCCATGCCAAGGTCTGTGATCTGC...CACCTGTCTCACAGAGAAGTGCAATCCCGTTCTCTCCAGCATGTTACCTAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR-3UTR TCA 90 bp | CATTTATTGAACAGGACAGGAAAGAAATCAATGGAGAATTTCCATGTGTTGGCAATGCTGGAGTCCTGGTaGAAAGTCTCCACTCAACAC | + |
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Preference number: 2 (lower is better) Translates to: HLLNRTGKKSMENFHVLAMLESW*KVSTQH Trigger: GTGTTGAGTGGAGACTTTTCACCAGGACTCCAGCAT...TGCCAACACATGGAAATTCTCCATTGATTTCTTTCCTGTCCTGTTCAATAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 |
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| 3UTR-3UTR CAA 90 bp | GCACTTCTCTGTGAGACAGGTGGAGAGCAGATCACAGACCTTGGCATGGGAGTCAGCAGATCACAGACCTaGGCATGGGAGTCTGTATGG | + |
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Preference number: 3 (lower is better) Translates to: ALLCETGGEQITDLGMGVSRSQT*AWESVW Trigger: CCATACAGACTCCCATGCCAAGGTCTGTGATCTGCT...GACTCCCATGCCAAGGTCTGTGATCTGCTCTCCACCTGTCTCACAGAGAAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR-3UTR CAA 90 bp | TTGCACTTCTCTGTGAGACAGGTGGAGAGCAGATCACAGACCTTGGCATGGGAGCTGGAGAGAACGGGATaGCACTTCTCTGTGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: LHFSVRQVESRSQTLAWELERTG*HFSVRQ Trigger: CTGTCTCACAGAGAAGTGCAATCCCGTTCTCTCCAG...CTCCCATGCCAAGGTCTGTGATCTGCTCTCCACCTGTCTCACAGAGAAGTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR-3UTR CAA 90 bp | TTGCACTTCTCTGTGAGACAGGTGGAGAGCAGATCACAGACCTTGGCATGGGAGTGCTCTCATTGTATATaGCCCACCTGGAGGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: LHFSVRQVESRSQTLAWECSHCI*PTWRLR Trigger: CCTGAGCCTCCAGGTGGGCAATATACAATGAGAGCA...CTCCCATGCCAAGGTCTGTGATCTGCTCTCCACCTGTCTCACAGAGAAGTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR CCA 72 bp | GTGAGACAGGTGGAGAGCAGATCACAGACCTTGGCATaGGAGTCTGTATGGATAGGAAGGGATGATGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: VRQVESRSQTLA*ESVWIGRDDAG Trigger: TCCAGCATCATCCCTTCCTATCCATACAGACTCCCATGCCAAGGTCTGTGATCTGCTCTCCACCTGTCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR-3UTR CAA 90 bp | GGATTGCACTTCTCTGTGAGACAGGTGGAGAGCAGATCACAGACCTTGGCATGGACACCAACCTCCTCCTaGCTCTCATTGTATATTGCC | + |
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Preference number: 3 (lower is better) Translates to: GLHFSVRQVESRSQTLAWTPTSS*LSLYIA Trigger: GGCAATATACAATGAGAGCAAGGAGGAGGTTGGTGT...CCATGCCAAGGTCTGTGATCTGCTCTCCACCTGTCTCACAGAGAAGTGCAATCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107488.4 |
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| 3UTR-3UTR CAA 90 bp | CATTTATTGAACAGGACAGGAAAGAAATCAATGGAGAATTTCCATGTGTTGGCATGCTCTCATTGTATATaGCCCACCTGGAGGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: HLLNRTGKKSMENFHVLACSHCI*PTWRLR Trigger: CCTGAGCCTCCAGGTGGGCAATATACAATGAGAGCA...TGCCAACACATGGAAATTCTCCATTGATTTCTTTCCTGTCCTGTTCAATAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR TCA 72 bp | GGCACAATACTAATGCATTTGGAAGGGCCTTGTTCATaGACACCAACCTCCTCCTTGCTCTCATTGTATATT | + |
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Preference number: 3 (lower is better) Translates to: GTILMHLEGPCS*TPTSSLLSLYI Trigger: AATATACAATGAGAGCAAGGAGGAGGTTGGTGTTCATGAACAAGGCCCTTCCAAATGCATTAGTATTGTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107488.4 |
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| 3UTR-3UTR CAA 90 bp | TTTATTGAACAGGACAGGAAAGAAATCAATGGAGAATTTCCATGTGTTGGCAAATCCTCCTTGCTCTCATaGTATATTGCCCACCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: FIEQDRKEINGEFPCVGKSSLLS*YIAHLE Trigger: CTCCAGGTGGGCAATATACAATGAGAGCAAGGAGGA...TTTGCCAACACATGGAAATTCTCCATTGATTTCTTTCCTGTCCTGTTCAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| 3UTR CAA 72 bp | TTCTCTGTGAGACAGGTGGAGAGCAGATCACAGACCTaGGCATGGGAGTCTGTATGGATAGGAAGGGATGAT | + |
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Preference number: 4 (lower is better) Translates to: FSVRQVESRSQT*AWESVWIGRDD Trigger: ATCATCCCTTCCTATCCATACAGACTCCCATGCCAAGGTCTGTGATCTGCTCTCCACCTGTCTCACAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| CDS-3UTR GCA 90 bp | GGAGAGAACGGGATTGCACTTCTCTGTGAGACAGGTGGAGAGCAGATCACAGACTCGCAGTCATTTCGGTaGACTCTTCATTTACAATTA | + |
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Preference number: 4 (lower is better) Translates to: GENGIALLCETGGEQITDSQSFR*TLHLQL Trigger: TAATTGTAAATGAAGAGTGCACCGAAATGACTGCGA...GTCTGTGATCTGCTCTCCACCTGTCTCACAGAGAAGTGCAATCCCGTTCTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| CDS-3UTR CCA 90 bp | GGATTGCACTTCTCTGTGAGACAGGTGGAGAGCAGATCACAGACCTTGGCATGGCTAGATTCTTCTGCATaGATACAGACTAAAGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: GLHFSVRQVESRSQTLAWLDSSA*IQTKVS Trigger: ACTGACTTTAGTCTGTATCCATGCAGAAGAATCTAG...CCATGCCAAGGTCTGTGATCTGCTCTCCACCTGTCTCACAGAGAAGTGCAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| CDS-3UTR GCA 90 bp | GAGAACGGGATTGCACTTCTCTGTGAGACAGGTGGAGAGCAGATCACAGACCTTTCGCAGTCATTTCGGTaGACTCTTCATTTACAATTA | + |
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Preference number: 4 (lower is better) Translates to: ENGIALLCETGGEQITDLSQSFR*TLHLQL Trigger: TAATTGTAAATGAAGAGTGCACCGAAATGACTGCGA...AAGGTCTGTGATCTGCTCTCCACCTGTCTCACAGAGAAGTGCAATCCCGTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| CDS-3UTR GCA 90 bp | TCACAGACCTTGGCATGGGAGTCTGTATGGATAGGAAGGGATGATGCTGGAGTCTCGCAGTCATTTCGGTaGACTCTTCATTTACAATTA | + |
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Preference number: 4 (lower is better) Translates to: SQTLAWESVWIGRDDAGVSQSFR*TLHLQL Trigger: TAATTGTAAATGAAGAGTGCACCGAAATGACTGCGA...GACTCCAGCATCATCCCTTCCTATCCATACAGACTCCCATGCCAAGGTCTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| CDS-3UTR CCA 90 bp | CTAGGTAACATGCTGGAGAGAACGGGATTGCACTTCTCTGTGAGACAGGTGGAGCTAGATTCTTCTGCATaGATACAGACTAAAGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LGNMLERTGLHFSVRQVELDSSA*IQTKVS Trigger: ACTGACTTTAGTCTGTATCCATGCAGAAGAATCTAG...CTCCACCTGTCTCACAGAGAAGTGCAATCCCGTTCTCTCCAGCATGTTACCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| CDS-3UTR CCA 90 bp | ATCCTAGGTAACATGCTGGAGAGAACGGGATTGCACTTCTCTGTGAGACAGGTGCTAGATTCTTCTGCATaGATACAGACTAAAGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: ILGNMLERTGLHFSVRQVLDSSA*IQTKVS Trigger: ACTGACTTTAGTCTGTATCCATGCAGAAGAATCTAG...CACCTGTCTCACAGAGAAGTGCAATCCCGTTCTCTCCAGCATGTTACCTAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| CDS CCA 90 bp | TGTTCTACATTAAAGTTCCTTTCCATAGAACTAGATTCTTCTGCATaGATACAGACTAAAGTCAGTTCCAAACACAGGAGCAGAAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: CSTLKFLSIELDSSA*IQTKVSSKHRSRSS Trigger: GCTGCTTCTGCTCCTGTGTTTGGAACTGACTTTAGTCTGTATCCATGCAGAAGAATCTAGTTCTATGGAAAGGAACTTTAATGTAGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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| CDS CCA 72 bp | TTAAAGTTCCTTTCCATAGAACTAGATTCTTCTGCATaGATACAGACTAAAGTCAGTTCCAAACACAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LKFLSIELDSSA*IQTKVSSKHRS Trigger: GCTCCTGTGTTTGGAACTGACTTTAGTCTGTATCCATGCAGAAGAATCTAGTTCTATGGAAAGGAACTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084531.11 ENSMUST00000107472.8 ENSMUST00000107488.4 |
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