Pregenerated sensors for MUP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078688

Ensembl transcript IDs: ENSMUST00000074700.9, ENSMUST00000107490.5

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTTTGTACATTAAAGTTCCTTCCCGTAGAACTAGCTTCTTCTGCATaGACACAGACTAGGGTCAGTCCCAAACACAGCAGCAGCAGCATC	+
Preference number: 5 (lower is better) Translates to: FCTLKFLPVELASSA*TQTRVSPKHSSSSI Trigger: GATGCTGCTGCTGCTGTGTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTTTAATGTACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074700.9 ENSMUST00000107490.5
CDS CAA 90 bp	TTGAATCCATCATACGTCACAGAATATTCACCAGCCTTTTCTGTTTaGTCAGCAACCATAGATAATTCCGAGCACTCTTCATCTCTTACA	+
Preference number: 6 (lower is better) Translates to: LNPSYVTEYSPAFSV*SATIDNSEHSSSLT Trigger: TGTAAGAGATGAAGAGTGCTCGGAATTATCTATGGTTGCTGACAAAACAGAAAAGGCTGGTGAATATTCTGTGACGTATGATGGATTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074700.9 ENSMUST00000107490.5
CDS CCA 72 bp	ATAGATAATTCCGAGCACTCTTCATCTCTTACAGTATaGAATTTAAGAACTAAGGAATTCTCCAAGACATGG	+
Preference number: 6 (lower is better) Translates to: IDNSEHSSSLTV*NLRTKEFSKTW Trigger: CCATGTCTTGGAGAATTCCTTAGTTCTTAAATTCCATACTGTAAGAGATGAAGAGTGCTCGGAATTATCTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074700.9 ENSMUST00000107490.5

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