Pregenerated sensors for MUP14 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073830

Ensembl transcript IDs: ENSMUST00000071005.9, ENSMUST00000075206.12, ENSMUST00000125461.8

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTTTCTACATTAAAGTTCCTTCCCGTAGAACTAGCTTCTTCTGCATaGACACACACTAGGGTCAGCCCCAAACACAGCAGCAGCAGCATC	+
Preference number: 5 (lower is better) Translates to: FSTLKFLPVELASSA*THTRVSPKHSSSSI Trigger: GATGCTGCTGCTGCTGTGTTTGGGGCTGACCCTAGTGTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTTTAATGTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071005.9 ENSMUST00000075206.12
CDS CCA 90 bp	TCAGCAACCATAGATAATTCCGAGCACTCTTCATCTCTTACAGTATaGAATTTAAGAACTAAGGAATTCTCCAAGACACGGATTTGCTCC	+
Preference number: 5 (lower is better) Translates to: SATIDNSEHSSSLTV*NLRTKEFSKTRICS Trigger: GGAGCAAATCCGTGTCTTGGAGAATTCCTTAGTTCTTAAATTCCATACTGTAAGAGATGAAGAGTGCTCGGAATTATCTATGGTTGCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071005.9 ENSMUST00000075206.12
CDS CCA 90 bp	TTGTCAGCAACCATAGATAATTCCGAGCACTCTTCATCTACAGTATaGAATTTAAGAACTAAGGAATTCTCCAAGACACGGATTTGCTCC	+
Preference number: 5 (lower is better) Translates to: LSATIDNSEHSSSTV*NLRTKEFSKTRICS Trigger: GGAGCAAATCCGTGTCTTGGAGAATTCCTTAGTTCTTAAATTCCATACTGTAGATGAAGAGTGCTCGGAATTATCTATGGTTGCTGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125461.8
CDS CCA 72 bp	TTAAAGTTCCTTCCCGTAGAACTAGCTTCTTCTGCATaGACACACACTAGGGTCAGCCCCAAACACAGCAGC	+
Preference number: 6 (lower is better) Translates to: LKFLPVELASSA*THTRVSPKHSS Trigger: GCTGCTGTGTTTGGGGCTGACCCTAGTGTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071005.9 ENSMUST00000075206.12
CDS CAA 72 bp	TCATACGTCACAGAATATTCACCAGCCTTTTCTGTTTaGTCAGCAACCATAGATAATTCCGAGCACTCTTCA	+
Preference number: 6 (lower is better) Translates to: SYVTEYSPAFSV*SATIDNSEHSS Trigger: TGAAGAGTGCTCGGAATTATCTATGGTTGCTGACAAAACAGAAAAGGCTGGTGAATATTCTGTGACGTATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071005.9 ENSMUST00000075206.12 ENSMUST00000125461.8
CDS CAA 90 bp	TTGAATCCATCATACGTCACAGAATATTCACCAGCCTTTTCTGTTTaGTCAGCAACCATAGATAATTCCGAGCACTCTTCATCTACAGTA	+
Preference number: 6 (lower is better) Translates to: LNPSYVTEYSPAFSV*SATIDNSEHSSSTV Trigger: TACTGTAGATGAAGAGTGCTCGGAATTATCTATGGTTGCTGACAAAACAGAAAAGGCTGGTGAATATTCTGTGACGTATGATGGATTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125461.8
CDS CCA 72 bp	ACCATAGATAATTCCGAGCACTCTTCATCTACAGTATaGAATTTAAGAACTAAGGAATTCTCCAAGACACGG	+
Preference number: 6 (lower is better) Translates to: TIDNSEHSSSTV*NLRTKEFSKTR Trigger: CCGTGTCTTGGAGAATTCCTTAGTTCTTAAATTCCATACTGTAGATGAAGAGTGCTCGGAATTATCTATGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125461.8
CDS CCA 72 bp	ATAGATAATTCCGAGCACTCTTCATCTCTTACAGTATaGAATTTAAGAACTAAGGAATTCTCCAAGACACGG	+
Preference number: 6 (lower is better) Translates to: IDNSEHSSSLTV*NLRTKEFSKTR Trigger: CCGTGTCTTGGAGAATTCCTTAGTTCTTAAATTCCATACTGTAAGAGATGAAGAGTGCTCGGAATTATCTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071005.9 ENSMUST00000075206.12
CDS GCA 72 bp	AATTTAAGAACTAAGGAATTCTCCAAGACACGGATTTaGTCCAGAAAAAGTCTAAAGTTGCCATTATCTTCT	+
Preference number: 6 (lower is better) Translates to: NLRTKEFSKTRI*SRKSLKLPLSS Trigger: AGAAGATAATGGCAACTTTAGACTTTTTCTGGAGCAAATCCGTGTCTTGGAGAATTCCTTAGTTCTTAAATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071005.9 ENSMUST00000075206.12 ENSMUST00000125461.8