Pregenerated sensors for MUP10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078680

Ensembl transcript IDs: ENSMUST00000098047.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTTTCTACATTAAAGTTCCTTCCCGTAGAACTAGCTTCTTCTGCATaGACACAGACTAGGGTCAGTCCCAAACACAGCAGCAGCATCATC	+
Preference number: 5 (lower is better) Translates to: FSTLKFLPVELASSA*TQTRVSPKHSSSII Trigger: GATGATGCTGCTGCTGTGTTTGGGACTGACCCTAGTCTGTGTCCATGCAGAAGAAGCTAGTTCTACGGGAAGGAACTTTAATGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098047.3
CDS CCA 72 bp	ATAGATAATTCGGAGCACTCTTCATCTCTTACAGTATaGAATTTAAGAACTAAGGATTTCTCCAAGACATGG	+
Preference number: 6 (lower is better) Translates to: IDNSEHSSSLTV*NLRTKDFSKTW Trigger: CCATGTCTTGGAGAAATCCTTAGTTCTTAAATTCCATACTGTAAGAGATGAAGAGTGCTCCGAATTATCTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098047.3
CDS CCA 72 bp	GTATGGAATTTAAGAACTAAGGATTTCTCCAAGACATaGATTTGCTCCAGAAAAAGTCTAAAGTTGCCATTA	+
Preference number: 6 (lower is better) Translates to: VWNLRTKDFSKT*ICSRKSLKLPL Trigger: TAATGGCAACTTTAGACTTTTTCTGGAGCAAATCCATGTCTTGGAGAAATCCTTAGTTCTTAAATTCCATAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098047.3

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