Pregenerated sensors for MUCL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073408Ensembl transcript IDs: ENSMUST00000095467.4
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCTGGGACCCAGGGTCCTACTAGTCTTTGGAATGTGGAGGTGCTaGTGCCTCACCAAGCCACGCCCTTTCCTGTACTGGTCCCGCCCC | + |
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Preference number: 1 (lower is better) Translates to: LLGPRVLLVFGMWRC*CLTKPRPFLYWSRP Trigger: GGGGCGGGACCAGTACAGGAAAGGGCGTGGCTTGGTGAGGCATCAGCACCTCCACATTCCAAAGACTAGTAGGACCCTGGGTCCCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR TCA 90 bp | CTGTCCATCAATGCTATTCTTACATCACTTTCTATGGAGAGTACTTaGGTTATTCTTTCTTCTCTCTCCTCCAAATGTTCGTCTGTTGCC | + |
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Preference number: 1 (lower is better) Translates to: LSINAILTSLSMEST*VILSSLSSKCSSVA Trigger: GGCAACAGACGAACATTTGGAGGAGAGAGAAGAAAGAATAACTCAAGTACTCTCCATAGAAAGTGATGTAAGAATAGCATTGATGGACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR-3UTR GCA 90 bp | TCTATCCACTTCCTCCCCGCTCCTCGTCTTGCGCACCAGGTAAAGAAACGGGTTCAAGTGCTGAGAAGATaGACCACCGGGGAAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SIHFLPAPRLAHQVKKRVQVLRR*TTGEGW Trigger: CCAGCCTTCCCCGGTGGTGCATCTTCTCAGCACTTG...AACCCGTTTCTTTACCTGGTGCGCAAGACGAGGAGCGGGGAGGAAGTGGATAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR-3UTR GCA 90 bp | TCTATCCACTTCCTCCCCGCTCCTCGTCTTGCGCACCAGGTAAAGAAACGGGTTTACTGGTCCCGCCCCTaGTGTCCATCAATGCTATTC | + |
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Preference number: 2 (lower is better) Translates to: SIHFLPAPRLAHQVKKRVYWSRP*CPSMLF Trigger: GAATAGCATTGATGGACAGCAGGGGCGGGACCAGTA...AACCCGTTTCTTTACCTGGTGCGCAAGACGAGGAGCGGGGAGGAAGTGGATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR-3UTR TCA 90 bp | AAGATGGAGAAATGCCAAGTGCTGAGAAGATGCACCACCGGGGAAGGCTGGGGATTTTGCTGCCCTTTCTaGGTTCATGAATTCGGAATC | + |
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Preference number: 2 (lower is better) Translates to: KMEKCQVLRRCTTGEGWGFCCPF*VHEFGI Trigger: GATTCCGAATTCATGAACTCAGAAAGGGCAGCAAAA...TCCCCAGCCTTCCCCGGTGGTGCATCTTCTCAGCACTTGGCATTTCTCCATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR CAA 90 bp | GTACTTGAGTTATTCTTTCTTCTCTCTCCTCCAAATGTTCGTCTGTaGCCCTTACCGCCTTGTTCCTCAGCTAGTCAGTTAGGAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: VLELFFLLSPPNVRL*PLPPCSSASQLGAW Trigger: CCATGCTCCTAACTGACTAGCTGAGGAACAAGGCGGTAAGGGCAACAGACGAACATTTGGAGGAGAGAGAAGAAAGAATAACTCAAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR-3UTR GCA 90 bp | AATACATCATGCTTTATTACAGAAGCCCAGCAGAGGGCGCCTGTCCTCTATCCACCTGCTGTCCATCAATaGTATTCTTACATCACTTTC | + |
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Preference number: 2 (lower is better) Translates to: NTSCFITEAQQRAPVLYPPAVHQ*YSYITF Trigger: GAAAGTGATGTAAGAATAGCATTGATGGACAGCAGG...TGGATAGAGGACAGGCGCCCTCTGCTGGGCTTCTGTAATAAAGCATGATGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR CAA 90 bp | GCTGTCCATCAATGCTATTCTTACATCACTTTCTATGGAGAGTACTaGAGTTATTCTTTCTTCTCTCTCCTCCAAATGTTCGTCTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: AVHQCYSYITFYGEY*SYSFFSLLQMFVCC Trigger: GCAACAGACGAACATTTGGAGGAGAGAGAAGAAAGAATAACTCAAGTACTCTCCATAGAAAGTGATGTAAGAATAGCATTGATGGACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR-3UTR TCA 90 bp | TGTCCATCAATGCTATTCTTACATCACTTTCTATGGAGAGTACTTGAGTTATTCCCCTTTCTGAGTTCATaGATTCGGAATCTAATGCAT | + |
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Preference number: 2 (lower is better) Translates to: CPSMLFLHHFLWRVLELFPFLSS*IRNLMH Trigger: ATGCATTAGATTCCGAATTCATGAACTCAGAAAGGG...GAATAACTCAAGTACTCTCCATAGAAAGTGATGTAAGAATAGCATTGATGGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR TCA 72 bp | CCCAGGGTCCTACTAGTCTTTGGAATGTGGAGGTGCTaGTGCCTCACCAAGCCACGCCCTTTCCTGTACTGG | + |
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Preference number: 3 (lower is better) Translates to: PRVLLVFGMWRC*CLTKPRPFLYW Trigger: CCAGTACAGGAAAGGGCGTGGCTTGGTGAGGCATCAGCACCTCCACATTCCAAAGACTAGTAGGACCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR GCA 72 bp | ACCAAGCCACGCCCTTTCCTGTACTGGTCCCGCCCCTaGTGTCCATCAATGCTATTCTTACATCACTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: TKPRPFLYWSRP*CPSMLFLHHFL Trigger: TAGAAAGTGATGTAAGAATAGCATTGATGGACAGCAGGGGCGGGACCAGTACAGGAAAGGGCGTGGCTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR-3UTR CAA 90 bp | TGGTCCCGCCCCTGCTGTCCATCAATGCTATTCTTACATCACTTTCTATGGAGATGGGGGCTACAGCTTTaGTCTGTTAGTTTTTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: WSRPCCPSMLFLHHFLWRWGLQL*SVSFCC Trigger: GCAGCAAAAACTAACAGACAAAAGCTGTAGCCCCCA...TCTCCATAGAAAGTGATGTAAGAATAGCATTGATGGACAGCAGGGGCGGGACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | CACCAAGCCACGCCCTTTCCTGTACTGGTCCCGCCCCTGCTGTCCATCAATGCTGTTTCCCCAGCAGCATaGAGGCCTCCAGGCAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: HQATPFPVLVPPLLSINAVSPAA*RPPGKL Trigger: CAGCTTGCCTGGAGGCCTCCATGCTGCTGGGGAAAC...AGCATTGATGGACAGCAGGGGCGGGACCAGTACAGGAAAGGGCGTGGCTTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | CACCAAGCCACGCCCTTTCCTGTACTGGTCCCGCCCCTGCTGTCCATCAATGCTTCCTCTGGAATACGGTaGGACTCGCTGTGGGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: HQATPFPVLVPPLLSINASSGIR*DSLWVL Trigger: CAAAACCCACAGCGAGTCCCACCGTATTCCAGAGGA...AGCATTGATGGACAGCAGGGGCGGGACCAGTACAGGAAAGGGCGTGGCTTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | AACATGGTGGAGAGCGAGGAGAGGGGATGTGGGCTGAGTGACGACGGTGACTCCTGTCTTCTGTGGCTTTaGCTGGTTGTGTGGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: NMVESEERGCGLSDDGDSCLLWL*LVVWSP Trigger: TGGAGACCACACAACCAGCCAAAGCCACAGAAGACA...GGAGTCACCGTCGTCACTCAGCCCACATCCCCTCTCCTCGCTCTCCACCATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR GCA 90 bp | TCTATCCACTTCCTCCCCGCTCCTCGTCTTGCGCACCAGGTAAAGAAACGGGTTTTTGGCCTTCTGGGTTaGTGTAGCCTCAGGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SIHFLPAPRLAHQVKKRVFGLLG*CSLREV Trigger: GACCTCCCTGAGGCTACAGCAACCCAGAAGGCCAAA...AACCCGTTTCTTTACCTGGTGCGCAAGACGAGGAGCGGGGAGGAAGTGGATAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR GCA 90 bp | TCGGAATCTAATGCATCTTCCAGGAAAGGGGCTAAGCCTGGAAGGTCTGGGGATCAGGCAAGCTGTGGGTaGTCTGCTGGGGGTAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SESNASSRKGAKPGRSGDQASCG*SAGGSE Trigger: CTCACTACCCCCAGCAGAGCACCCACAGCTTGCCTG...ATCCCCAGACCTTCCAGGCTTAGCCCCTTTCCTGGAAGATGCATTAGATTCCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | CATCATGCTTTATTACAGAAGCCCAGCAGAGGGCGCCTGTCCTCTATCCACTTCCCTTTGTCTTCAGGCTaGGGCTCGGGCTCCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HHALLQKPSRGRLSSIHFPLSSG*GSGSSE Trigger: CTCAGAGGAGCCCGAGCCCCAGCCTGAAGACAAAGG...GAAGTGGATAGAGGACAGGCGCCCTCTGCTGGGCTTCTGTAATAAAGCATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR TCA 90 bp | ACCCCCGTGTGTACCCACCCACGGACAGAAAACCCACCACAGACATCCAGAAAAGTTTTCCTTGACTGCTaGGATCCTTCTCTGAAGCCG | + |
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Preference number: 4 (lower is better) Translates to: TPVCTHPRTENPPQTSRKVFLDC*DPSLKP Trigger: CGGCTTCAGAGAAGGATCTCAGCAGTCAAGGAAAAC...TTTTCTGGATGTCTGTGGTGGGTTTTCTGTCCGTGGGTGGGTACACACGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR TCA 90 bp | CATCATGCTTTATTACAGAAGCCCAGCAGAGGGCGCCTGTCCTCTATCCACTTCGGGGTAGTGAGCTTCTaGAGTGCTGAGTCCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: HHALLQKPSRGRLSSIHFGVVSF*SAESQV Trigger: AACCTGGGACTCAGCACTTCAGAAGCTCACTACCCC...GAAGTGGATAGAGGACAGGCGCCCTCTGCTGGGCTTCTGTAATAAAGCATGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR GCA 90 bp | ATCATGCTTTATTACAGAAGCCCAGCAGAGGGCGCCTGTCCTCTATCCACTTCCGGAAGCACCTGGGCTTaGGAGCTACTCTCACTAGCT | + |
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Preference number: 4 (lower is better) Translates to: IMLYYRSPAEGACPLSTSGSTWA*ELLSLA Trigger: AGCTAGTGAGAGTAGCTCGCAAGCCCAGGTGCTTCC...GGAAGTGGATAGAGGACAGGCGCCCTCTGCTGGGCTTCTGTAATAAAGCATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | ACCCCCGTGTGTACCCACCCACGGACAGAAAACCCACCACAGACATCCAGAAAATCCTTGGGGTTTCTGTaGCATACACTGGGGAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: TPVCTHPRTENPPQTSRKSLGFL*HTLGKN Trigger: GTTCTTCCCCAGTGTATGCCACAGAAACCCCAAGGA...TTTTCTGGATGTCTGTGGTGGGTTTTCTGTCCGTGGGTGGGTACACACGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | TCGGAATCTAATGCATCTTCCAGGAAAGGGGCTAAGCCTGGAAGGTCTGGGGATTGGTTTTTGGCCTTCTaGGTTGCTGTAGCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SESNASSRKGAKPGRSGDWFLAF*VAVASG Trigger: CCCTGAGGCTACAGCAACCCAGAAGGCCAAAAACCA...ATCCCCAGACCTTCCAGGCTTAGCCCCTTTCCTGGAAGATGCATTAGATTCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | GGTAAAGATGGAGAAATGCCAAGTGCTGAGAAGATGCACCACCGGGGAAGGCTGTTTCATGACGGACAGTaGTGTTTCCATAGTCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: GKDGEMPSAEKMHHRGRLFHDGQ*CFHSLR Trigger: CCGCAGACTATGGAAACACCACTGTCCGTCATGAAA...CAGCCTTCCCCGGTGGTGCATCTTCTCAGCACTTGGCATTTCTCCATCTTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | ACCCCCGTGTGTACCCACCCACGGACAGAAAACCCACCACAGACATCCAGAAAAGGTCTCCAAGAATACTaGTGTTCTCTCAGAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TPVCTHPRTENPPQTSRKGLQEY*CSLRGS Trigger: AGAACCTCTGAGAGAACACCAGTATTCTTGGAGACC...TTTTCTGGATGTCTGTGGTGGGTTTTCTGTCCGTGGGTGGGTACACACGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | TCTATCCACTTCCTCCCCGCTCCTCGTCTTGCGCACCAGGTAAAGAAACGGGTTGGTGGGGAAGGGATCTaGTTTAGATTCAAATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SIHFLPAPRLAHQVKKRVGGEGI*FRFKFC Trigger: GCAGAATTTGAATCTAAACCAGATCCCTTCCCCACC...AACCCGTTTCTTTACCTGGTGCGCAAGACGAGGAGCGGGGAGGAAGTGGATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR TCA 90 bp | TCTATCCACTTCCTCCCCGCTCCTCGTCTTGCGCACCAGGTAAAGAAACGGGTTATTAGGTGTTTTCCTTaGCTGCTGAGATCCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SIHFLPAPRLAHQVKKRVIRCFP*LLRSFS Trigger: AGAGAAGGATCTCAGCAGTCAAGGAAAACACCTAAT...AACCCGTTTCTTTACCTGGTGCGCAAGACGAGGAGCGGGGAGGAAGTGGATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR GCA 90 bp | ATCATGCTTTATTACAGAAGCCCAGCAGAGGGCGCCTGTCCTCTATCCACTTCCAAACTGGGTAGGAATTaGGGCTCCCTTTGTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: IMLYYRSPAEGACPLSTSKLGRN*GSLCLQ Trigger: CTGAAGACAAAGGGAGCCGCAATTCCTACCCAGTTT...GGAAGTGGATAGAGGACAGGCGCCCTCTGCTGGGCTTCTGTAATAAAGCATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | GCCCTTTCCTGTACTGGTCCCGCCCCTGCTGTCCATCAATGCTATTCTTACATCATGAGCTCTGAGACATaGAAAGTTGTGGGCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ALSCTGPAPAVHQCYSYIMSSET*KVVGFC Trigger: ACAGAAGCCCACAACTTTCCATGTCTCAGAGCTCAT...GATGTAAGAATAGCATTGATGGACAGCAGGGGCGGGACCAGTACAGGAAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | TGGTCCCGCCCCTGCTGTCCATCAATGCTATTCTTACATCACTTTCTATGGAGACGAGTGGTGTTGCACTaGTTTTTGGCCTTCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: WSRPCCPSMLFLHHFLWRRVVLH*FLAFWV Trigger: AACCCAGAAGGCCAAAAACCAGTGCAACACCACTCG...TCTCCATAGAAAGTGATGTAAGAATAGCATTGATGGACAGCAGGGGCGGGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | TCGGAATCTAATGCATCTTCCAGGAAAGGGGCTAAGCCTGGAAGGTCTGGGGATATTTCGTCGTTAAGCTaGTTCGCCTTGTTGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SESNASSRKGAKPGRSGDISSLS*FALLKA Trigger: TGCCTTCAACAAGGCGAACCAGCTTAACGACGAAAT...ATCCCCAGACCTTCCAGGCTTAGCCCCTTTCCTGGAAGATGCATTAGATTCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | AAGATGGAGAAATGCCAAGTGCTGAGAAGATGCACCACCGGGGAAGGCTGGGGATTCTGTGGCATACACTaGGGAAGAACTTTGTCTAAT | + |
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Preference number: 4 (lower is better) Translates to: KMEKCQVLRRCTTGEGWGFCGIH*GRTLSN Trigger: ATTAGACAAAGTTCTTCCCCAGTGTATGCCACAGAA...TCCCCAGCCTTCCCCGGTGGTGCATCTTCTCAGCACTTGGCATTTCTCCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | GGTAAAGATGGAGAAATGCCAAGTGCTGAGAAGATGCACCACCGGGGAAGGCTGGTATCGTATTTTCACTaGCCGATGTGGTATGATGTT | + |
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Preference number: 4 (lower is better) Translates to: GKDGEMPSAEKMHHRGRLVSYFH*PMWYDV Trigger: AACATCATACCACATCGGCCAGTGAAAATACGATAC...CAGCCTTCCCCGGTGGTGCATCTTCTCAGCACTTGGCATTTCTCCATCTTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | AATACATCATGCTTTATTACAGAAGCCCAGCAGAGGGCGCCTGTCCTCTATCCAATGACTTGTCTTCTGTaGCTTTGGCTGGTTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: NTSCFITEAQQRAPVLYPMTCLL*LWLVVW Trigger: CCACACAACCAGCCAAAGCCACAGAAGACAAGTCAT...TGGATAGAGGACAGGCGCCCTCTGCTGGGCTTCTGTAATAAAGCATGATGTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | GCTCCTCGTCTTGCGCACCAGGTAAAGAAACGGGTTAAATTGGAAAGAAAATCTCTCCATCAGGTAAACTaGGTAGGAATTGCGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: APRLAHQVKKRVKLERKSLHQVN*VGIAAP Trigger: GGGAGCCGCAATTCCTACCCAGTTTACCTGATGGAG...AGATTTTCTTTCCAATTTAACCCGTTTCTTTACCTGGTGCGCAAGACGAGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR TCA 90 bp | TGGTCCCGCCCCTGCTGTCCATCAATGCTATTCTTACATCACTTTCTATGGAGATCCGTTTTATGGACATaGGAAGGGACAGTAGATGAC | + |
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Preference number: 4 (lower is better) Translates to: WSRPCCPSMLFLHHFLWRSVLWT*EGTVDD Trigger: GTCATCTACTGTCCCTTCTCATGTCCATAAAACGGA...TCTCCATAGAAAGTGATGTAAGAATAGCATTGATGGACAGCAGGGGCGGGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCCAGGCAGAAGAGAGAGTAGAGAAGAAAATATGTGATCTCGCTAGCTaGTGTGGCCTCTTTAATGTG | + |
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Preference number: 4 (lower is better) Translates to: SLSLSLSLQAEERVEKKICDLAS*CGLFNV Trigger: CACATTAAAGAGGCCACATCAGCTAGCGAGATCACA...TATTTTCTTCTCTACTCTCTCTTCTGCCTGGAGAGAGAGAGAGAGAGAGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | GCTCCTCGTCTTGCGCACCAGGTAAAGAAACGGGTTAAATTGGAAAGAAAATCTCTTTGGCTGGTTGTGTaGTCTCCAAGAATACTGGTG | + |
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Preference number: 4 (lower is better) Translates to: APRLAHQVKKRVKLERKSLWLVV*SPRILV Trigger: CACCAGTATTCTTGGAGACCACACAACCAGCCAAAG...AGATTTTCTTTCCAATTTAACCCGTTTCTTTACCTGGTGCGCAAGACGAGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR TCA 90 bp | AATACATCATGCTTTATTACAGAAGCCCAGCAGAGGGCGCCTGTCCTCTATCCAATACTTGGTGAATGTTaGTTGGGTTCTTGTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: NTSCFITEAQQRAPVLYPILGEC*LGSCDL Trigger: GAGATCACAAGAACCCAATCAACATTCACCAAGTAT...TGGATAGAGGACAGGCGCCCTCTGCTGGGCTTCTGTAATAAAGCATGATGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| 3UTR CAA 72 bp | TTATTCTTTCTTCTCTCTCCTCCAAATGTTCGTCTGTaGCCCTTACCGCCTTGTTCCTCAGCTAGTCAGTTA | + |
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Preference number: 4 (lower is better) Translates to: LFFLLSPPNVRL*PLPPCSSASQL Trigger: TAACTGACTAGCTGAGGAACAAGGCGGTAAGGGCAACAGACGAACATTTGGAGGAGAGAGAAGAAAGAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CCA 90 bp | TGTCCATCAATGCTATTCTTACATCACTTTCTATGGAGAGTACTTGAGTTATTCGCTACTCTCACTAGCTaGGCTGGTCTTTCCTTCATA | + |
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Preference number: 4 (lower is better) Translates to: CPSMLFLHHFLWRVLELFATLTS*AGLSFI Trigger: TATGAAGGAAAGACCAGCCCAGCTAGTGAGAGTAGC...GAATAACTCAAGTACTCTCCATAGAAAGTGATGTAAGAATAGCATTGATGGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS TCA 90 bp | GCAAGCTGTGGGTGCTCTGCTGGGGGTAGTGAGCTTCTGAAGTGCTaGGTCCCAGGTTCGTTCTGGATGTCAAAGAGCCAACTGTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: ASCGCSAGGSELLKC*VPGSFWMSKSQLSL Trigger: AAGGGACAGTTGGCTCTTTGACATCCAGAACGAACCTGGGACTCAGCACTTCAGAAGCTCACTACCCCCAGCAGAGCACCCACAGCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CAA 90 bp | CACCAAGCCACGCCCTTTCCTGTACTGGTCCCGCCCCTGCTGTCCATCAATGCTGTTCAGGTCCTGATGTaGTTAGGGTCTTTAGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: HQATPFPVLVPPLLSINAVQVLM*LGSLGC Trigger: ACACCCTAAAGACCCTAACAACATCAGGACCTGAAC...AGCATTGATGGACAGCAGGGGCGGGACCAGTACAGGAAAGGGCGTGGCTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS TCA 90 bp | CAGCCGAGCGCTCATTCCTGGCCATTAGGTGTTTTCCTTGACTGCTaGGATCCTTCTCTGAAGCCGGAGGCATTTCATGACGGACAGTGG | + |
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Preference number: 5 (lower is better) Translates to: QPSAHSWPLGVFLDC*DPSLKPEAFHDGQW Trigger: CCACTGTCCGTCATGAAATGCCTCCGGCTTCAGAGAAGGATCTCAGCAGTCAAGGAAAACACCTAATGGCCAGGAATGAGCGCTCGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CCA 90 bp | CATGGAAAGTTGTGGGCTTCTGTGAGGTGGTCCTTAAGCTGGCACTaGCCCCCATGGGACTCGCTCTCATACCTGATTTCGTCGTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: HGKLWASVRWSLSWH*PPWDSLSYLISSLS Trigger: GCTTAACGACGAAATCAGGTATGAGAGCGAGTCCCATGGGGGCCAGTGCCAGCTTAAGGACCACCTCACAGAAGCCCACAACTTTCCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS TCA 90 bp | CATAGTCTGCGGCTTTGGCGTTGTCTAGAGGTGTGTGCACTGGTTTaGCAAGGCGAGTGGTGTTGCACTGGTTTTTGGCCTTCTGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: HSLRLWRCLEVCALV*QGEWCCTGFWPSGL Trigger: CAACCCAGAAGGCCAAAAACCAGTGCAACACCACTCGCCTTGTCAAACCAGTGCACACACCTCTAGACAACGCCAAAGCCGCAGACTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS GCA 90 bp | TTAGATTCAAATTCTGCTGCTCCATCAGGTAAACTGGGTAGGAATTaGGGCTCCCTTTGTCTTCAGGCTGGGGCTCGGGCTCCTCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: LDSNSAAPSGKLGRN*GSLCLQAGARAPLS Trigger: ACTCAGAGGAGCCCGAGCCCCAGCCTGAAGACAAAGGGAGCCGCAATTCCTACCCAGTTTACCTGATGGAGCAGCAGAATTTGAATCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CAA 90 bp | AACATGGTGGAGAGCGAGGAGAGGGGATGTGGGCTGAGTGACGACGGTGACTCCAGGTTCGCCAGTCTTTaGAAGTTCTTGAAATGTGTT | + |
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Preference number: 5 (lower is better) Translates to: NMVESEERGCGLSDDGDSRFASL*KFLKCV Trigger: AACACATTTCAAGAACTTCAAAAGACTGGCGAACCT...GGAGTCACCGTCGTCACTCAGCCCACATCCCCTCTCCTCGCTCTCCACCATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CAA 90 bp | TCGGAATCTAATGCATCTTCCAGGAAAGGGGCTAAGCCTGGAAGGTCTGGGGATTTGTCTTCTGTGGCTTaGGCTGGTTGTGTGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SESNASSRKGAKPGRSGDLSSVA*AGCVVS Trigger: GGAGACCACACAACCAGCCAAAGCCACAGAAGACAA...ATCCCCAGACCTTCCAGGCTTAGCCCCTTTCCTGGAAGATGCATTAGATTCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CAA 90 bp | CATCATGCTTTATTACAGAAGCCCAGCAGAGGGCGCCTGTCCTCTATCCACTTCTTGAAGGCATACAGCTaGTGTTTCTCCTGGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: HHALLQKPSRGRLSSIHFLKAYS*CFSWVL Trigger: CAGCACCCAGGAGAAACACAAGCTGTATGCCTTCAA...GAAGTGGATAGAGGACAGGCGCCCTCTGCTGGGCTTCTGTAATAAAGCATGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS GCA 90 bp | TGGAGGTTCGCCAGTCTTTTGAAGTTCTTGAAATGTGTTAGCACCTaGCTCCCAAGAAGCCGGAAAGAAGAGGAGGCAGATGAAGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: WRFASLLKFLKCVST*LPRSRKEEEADEEA Trigger: GGCTTCTTCATCTGCCTCCTCTTCTTTCCGGCTTCTTGGGAGGCAGGTGCTAACACATTTCAAGAACTTCAAAAGACTGGCGAACCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CAA 90 bp | AATACATCATGCTTTATTACAGAAGCCCAGCAGAGGGCGCCTGTCCTCTATCCAACAAGGCGAGTGGTGTaGCACTGGTTTTTGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: NTSCFITEAQQRAPVLYPTRRVV*HWFLAF Trigger: GAAGGCCAAAAACCAGTGCAACACCACTCGCCTTGT...TGGATAGAGGACAGGCGCCCTCTGCTGGGCTTCTGTAATAAAGCATGATGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS TCA 90 bp | AAAGAGCCAACTGTCCCTTGGTGCATGGTCTCCGTTTTATGGACATaGGAAGGGACAGTAGATGACTTGTCTTCTGTGGCTTTGGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: KEPTVPWCMVSVLWT*EGTVDDLSSVALAG Trigger: ACCAGCCAAAGCCACAGAAGACAAGTCATCTACTGTCCCTTCTCATGTCCATAAAACGGAGACCATGCACCAAGGGACAGTTGGCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CAA 90 bp | AAGATGGAGAAATGCCAAGTGCTGAGAAGATGCACCACCGGGGAAGGCTGGGGAAGTCTTTTGAAGTTCTaGAAATGTGTTAGCACCTGC | + |
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Preference number: 5 (lower is better) Translates to: KMEKCQVLRRCTTGEGWGSLLKF*KCVSTC Trigger: GCAGGTGCTAACACATTTCAAGAACTTCAAAAGACT...TCCCCAGCCTTCCCCGGTGGTGCATCTTCTCAGCACTTGGCATTTCTCCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CAA 90 bp | GCTCCTCGTCTTGCGCACCAGGTAAAGAAACGGGTTAAATTGGAAAGAAAATCTCTGAGGCAAACGGAATaGTGTGATGTTCAGGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: APRLAHQVKKRVKLERKSLRQTE*CDVQVL Trigger: CAGGACCTGAACATCACACAATTCCGTTTGCCTCAG...AGATTTTCTTTCCAATTTAACCCGTTTCTTTACCTGGTGCGCAAGACGAGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CAA 90 bp | GCACGCGCTTTCGGTAAAGATGGAGAAATGCCAAGTGCTGAGAAGATGCACCACGTCTTTCCTTCATACTaGGTGAATGTTGATTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: ARAFGKDGEMPSAEKMHHVFPSY*VNVDWV Trigger: AACCCAATCAACATTCACCAAGTATGAAGGAAAGAC...GTGGTGCATCTTCTCAGCACTTGGCATTTCTCCATCTTTACCGAAAGCGCGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CCA 90 bp | TCACTAGCTGGGCTGGTCTTTCCTTCATACTTGGTGAATGTTGATTaGGTTCTTGTGATCTCGCTAGCTGATGTGGCCTCTTTAATGTGT | + |
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Preference number: 5 (lower is better) Translates to: SLAGLVFPSYLVNVD*VLVISLADVASLMC Trigger: ACACATTAAAGAGGCCACATCAGCTAGCGAGATCACAAGAACCCAATCAACATTCACCAAGTATGAAGGAAAGACCAGCCCAGCTAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CAA 90 bp | TGTCCATCAATGCTATTCTTACATCACTTTCTATGGAGAGTACTTGAGTTATTCGGTGTGTGCACTGGTTaGACAAGGCGAGTGGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: CPSMLFLHHFLWRVLELFGVCTG*TRRVVL Trigger: CAACACCACTCGCCTTGTCAAACCAGTGCACACACC...GAATAACTCAAGTACTCTCCATAGAAAGTGATGTAAGAATAGCATTGATGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS-3UTR CAA 90 bp | GTCCATCAATGCTATTCTTACATCACTTTCTATGGAGAGTACTTGAGTTATTCTCTGAGACATGGAAAGTaGTGGGCTTCTGTGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: VHQCYSYITFYGEYLSYSLRHGK*WASVRW Trigger: CCACCTCACAGAAGCCCACAACTTTCCATGTCTCAG...AGAATAACTCAAGTACTCTCCATAGAAAGTGATGTAAGAATAGCATTGATGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CCA 72 bp | TTGTCTTCAGGCTGGGGCTCGGGCTCCTCTGAGTTCTaGGTCAGTACATGGCGTGCTCGTGATGCACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSSGWGSGSSEF*VSTWRARDAQE Trigger: CTCCTGTGCATCACGAGCACGCCATGTACTGACCCAGAACTCAGAGGAGCCCGAGCCCCAGCCTGAAGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CCA 72 bp | GGGAATGAATTATTCTCCCCTGTTTCCCCAGCAGCATaGAGGCCTCCAGGCAAGCTGTGGGTGCTCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GNELFSPVSPAA*RPPGKLWVLCW Trigger: CCAGCAGAGCACCCACAGCTTGCCTGGAGGCCTCCATGCTGCTGGGGAAACAGGGGAGAATAATTCATTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CCA 72 bp | TTGTGGGCTTCTGTGAGGTGGTCCTTAAGCTGGCACTaGCCCCCATGGGACTCGCTCTCATACCTGATTTCG | + |
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Preference number: 6 (lower is better) Translates to: LWASVRWSLSWH*PPWDSLSYLIS Trigger: CGAAATCAGGTATGAGAGCGAGTCCCATGGGGGCCAGTGCCAGCTTAAGGACCACCTCACAGAAGCCCACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CAA 90 bp | GCGTTGTCTAGAGGTGTGTGCACTGGTTTGACAAGGCGAGTGGTGTaGCACTGGTTTTTGGCCTTCTGGGTTGCTGTAGCCTCAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ALSRGVCTGLTRRVV*HWFLAFWVAVASGR Trigger: CCTCCCTGAGGCTACAGCAACCCAGAAGGCCAAAAACCAGTGCAACACCACTCGCCTTGTCAAACCAGTGCACACACCTCTAGACAACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS TCA 72 bp | GGGTGCTCTGCTGGGGGTAGTGAGCTTCTGAAGTGCTaGGTCCCAGGTTCGTTCTGGATGTCAAAGAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: GCSAGGSELLKC*VPGSFWMSKSQ Trigger: TTGGCTCTTTGACATCCAGAACGAACCTGGGACTCAGCACTTCAGAAGCTCACTACCCCCAGCAGAGCACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS TCA 72 bp | CAAGCTGTGGGTGCTCTGCTGGGGGTAGTGAGCTTCTaGAGTGCTGAGTCCCAGGTTCGTTCTGGATGTCAA | + |
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Preference number: 6 (lower is better) Translates to: QAVGALLGVVSF*SAESQVRSGCQ Trigger: TTGACATCCAGAACGAACCTGGGACTCAGCACTTCAGAAGCTCACTACCCCCAGCAGAGCACCCACAGCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS GCA 72 bp | AATTCTGCTGCTCCATCAGGTAAACTGGGTAGGAATTaGGGCTCCCTTTGTCTTCAGGCTGGGGCTCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: NSAAPSGKLGRN*GSLCLQAGARA Trigger: AGCCCGAGCCCCAGCCTGAAGACAAAGGGAGCCGCAATTCCTACCCAGTTTACCTGATGGAGCAGCAGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CCA 72 bp | GTGTGCACTGGTTTGACAAGGCGAGTGGTGTTGCACTaGTTTTTGGCCTTCTGGGTTGCTGTAGCCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VCTGLTRRVVLH*FLAFWVAVASG Trigger: CCCTGAGGCTACAGCAACCCAGAAGGCCAAAAACCAGTGCAACACCACTCGCCTTGTCAAACCAGTGCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS TCA 72 bp | CGGCTTTGGCGTTGTCTAGAGGTGTGTGCACTGGTTTaGCAAGGCGAGTGGTGTTGCACTGGTTTTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RLWRCLEVCALV*QGEWCCTGFWP Trigger: AGGCCAAAAACCAGTGCAACACCACTCGCCTTGTCAAACCAGTGCACACACCTCTAGACAACGCCAAAGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CCA 72 bp | CCTTCTCTGAAGCCGGAGGCATTTCATGACGGACAGTaGTGTTTCCATAGTCTGCGGCTTTGGCGTTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: PSLKPEAFHDGQ*CFHSLRLWRCL Trigger: TAGACAACGCCAAAGCCGCAGACTATGGAAACACCACTGTCCGTCATGAAATGCCTCCGGCTTCAGAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CAA 72 bp | CGATGTGGTATGATGTTTTATGGGAAGCACCTGGGCTaGCGAGCTACTCTCACTAGCTGGGCTGGTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RCGMMFYGKHLG*RATLTSWAGLS Trigger: GGAAAGACCAGCCCAGCTAGTGAGAGTAGCTCGCAAGCCCAGGTGCTTCCCATAAAACATCATACCACATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS TCA 72 bp | GCTCATTCCTGGCCATTAGGTGTTTTCCTTGACTGCTaGGATCCTTCTCTGAAGCCGGAGGCATTTCATGAC | + |
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Preference number: 6 (lower is better) Translates to: AHSWPLGVFLDC*DPSLKPEAFHD Trigger: GTCATGAAATGCCTCCGGCTTCAGAGAAGGATCTCAGCAGTCAAGGAAAACACCTAATGGCCAGGAATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CAA 72 bp | CAGGTTCGTTCTGGATGTCAAAGAGCCAACTGTCCCTaGGTGCATGGTCTCCGTTTTATGGACATGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: QVRSGCQRANCP*VHGLRFMDMRR Trigger: CCTTCTCATGTCCATAAAACGGAGACCATGCACCAAGGGACAGTTGGCTCTTTGACATCCAGAACGAACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CAA 90 bp | GCTTGCGAGCTACTCTCACTAGCTGGGCTGGTCTTTCCTTCATACTaGGTGAATGTTGATTGGGTTCTTGTGATCTCGCTAGCTGATGTG | + |
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Preference number: 6 (lower is better) Translates to: ACELLSLAGLVFPSY*VNVDWVLVISLADV Trigger: CACATCAGCTAGCGAGATCACAAGAACCCAATCAACATTCACCAAGTATGAAGGAAAGACCAGCCCAGCTAGTGAGAGTAGCTCGCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS TCA 72 bp | GGTCTCCGTTTTATGGACATGAGAAGGGACAGTAGATaGCTTGTCTTCTGTGGCTTTGGCTGGTTGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: GLRFMDMRRDSR*LVFCGFGWLCG Trigger: ACCACACAACCAGCCAAAGCCACAGAAGACAAGTCATCTACTGTCCCTTCTCATGTCCATAAAACGGAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS TCA 72 bp | ACTGTCCCTTGGTGCATGGTCTCCGTTTTATGGACATaGGAAGGGACAGTAGATGACTTGTCTTCTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: TVPWCMVSVLWT*EGTVDDLSSVA Trigger: AGCCACAGAAGACAAGTCATCTACTGTCCCTTCTCATGTCCATAAAACGGAGACCATGCACCAAGGGACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CCA 72 bp | GGGCTGGTCTTTCCTTCATACTTGGTGAATGTTGATTaGGTTCTTGTGATCTCGCTAGCTGATGTGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GLVFPSYLVNVD*VLVISLADVAS Trigger: AGAGGCCACATCAGCTAGCGAGATCACAAGAACCCAATCAACATTCACCAAGTATGAAGGAAAGACCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CCA 72 bp | TGTGGCTTTGGCTGGTTGTGTGGTCTCCAAGAATACTaGTGTTCTCTCAGAGGTTCTTGTGGCTCTTACAGT | + |
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Preference number: 6 (lower is better) Translates to: CGFGWLCGLQEY*CSLRGSCGSYS Trigger: ACTGTAAGAGCCACAAGAACCTCTGAGAGAACACCAGTATTCTTGGAGACCACACAACCAGCCAAAGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CAA 72 bp | TCGTTAAGCTGGTTCGCCTTGTTGAAGGCATACAGCTaGTGTTTCTCCTGGGTGCTGAGGTCAAACGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLSWFALLKAYS*CFSWVLRSNVF Trigger: GAAAACGTTTGACCTCAGCACCCAGGAGAAACACAAGCTGTATGCCTTCAACAAGGCGAACCAGCTTAACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CCA 72 bp | ACTGGGGAAGAACTTTGTCTAATGAGCTCTGAGACATaGAAAGTTGTGGGCTTCTGTGAGGTGGTCCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: TGEELCLMSSET*KVVGFCEVVLK Trigger: CTTAAGGACCACCTCACAGAAGCCCACAACTTTCCATGTCTCAGAGCTCATTAGACAAAGTTCTTCCCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS TCA 72 bp | ATCTGGACAGACTTGTCTGAGGCAAACGGAATTGTGTaGTGTTCAGGTCCTGATGTTGTTAGGGTCTTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: IWTDLSEANGIV*CSGPDVVRVFR Trigger: CCTAAAGACCCTAACAACATCAGGACCTGAACATCACACAATTCCGTTTGCCTCAGACAAGTCTGTCCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CAA 72 bp | ATGTTGTTAGGGTCTTTAGGGTGTTGTATGAGGTCCTaGGGGTTTCTGTGGCATACACTGGGGAAGAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: MLLGSLGCCMRS*GFLWHTLGKNF Trigger: AAAGTTCTTCCCCAGTGTATGCCACAGAAACCCCAAGGACCTCATACAACACCCTAAAGACCCTAACAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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| CDS CAA 72 bp | AGGCAAACGGAATTGTGTGATGTTCAGGTCCTGATGTaGTTAGGGTCTTTAGGGTGTTGTATGAGGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RQTELCDVQVLM*LGSLGCCMRSL Trigger: CAAGGACCTCATACAACACCCTAAAGACCCTAACAACATCAGGACCTGAACATCACACAATTCCGTTTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095467.4 |
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