RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MUC5B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066108

Ensembl transcript IDs: ENSMUST00000165147.3

Found 641 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATaGGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACC +
Preference number: 1 (lower is better)
Translates to: GLLWGALTATGSHRE*GQNSQQAPQGQILT
Trigger: GGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR TCA 90 bp TCAACCCCAGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTaGTACAGATCCCTGGTAGCTGATCTTGCTTGGACAGTCCCATCT +
Preference number: 1 (lower is better)
Translates to: STPDPRAPPAGSHLA*YRSLVADLAWTVPS
Trigger: AGATGGGACTGTCCAAGCAAGATCAGCTACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCTGGGGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR CAA 90 bp CCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTaGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: PGTLLKWILIAPPPS*MLVLTVAGGGWSRG
Trigger: GCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR-3UTR CCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTCACACAGGCTTGCTGTaGGGAGCCTTAACAGCCACA +
Preference number: 2 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGHTGLL*GALTAT
Trigger: TGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTG...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR-3UTR TCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTGGCTCTCACAGAGAATaGGGCCAAAACAGCCAACAG +
Preference number: 2 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGGSHRE*GQNSQQ
Trigger: CTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCC...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR-3UTR GCA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGCAGTTGTGCAGGTTCTaGCCCAGGTGGAGGGACATA +
Preference number: 2 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLQLCRF*PRWRDI
Trigger: TATGTCCCTCCACCTGGGGCAGAACCTGCACAACTG...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR-3UTR GCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCCTCGGGGAGCTTGCCTaGCTAAGGTTCTCATGGTCA +
Preference number: 2 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSLGELA*LRFSWS
Trigger: TGACCATGAGAACCTTAGGCAGGCAAGCTCCCCGAG...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR-3UTR GCA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCCAAGTGGATCTTGATTaGCCCACCACCCTCTTTGAT +
Preference number: 2 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPQVDLD*PTTLFD
Trigger: ATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTG...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR-3UTR CCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACGGAACCCTCCTCAAGTaGATCTTGATTGCCCCACCA +
Preference number: 2 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNGTLLK*ILIAPP
Trigger: TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCC...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR-3UTR CCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGGGCCAGATCCTCACCTaGAACCCTCCTCAAGTGGAT +
Preference number: 2 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLGQILT*NPPQVD
Trigger: ATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCC...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR-3UTR CAA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGGGCCACAGAGGGTTCTaGTGGGCCTCGGGGAGCTTG +
Preference number: 3 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLGHRGF*WASGSL
Trigger: CAAGCTCCCCGAGGCCCACAAGAACCCTCTGTGGCC...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR-3UTR CAA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCGCCCCACCACCCTCTTaGATGCTGGTCTTAACAGTG +
Preference number: 3 (lower is better)
Translates to: EAKTANRLLRARSSPGTLAPPPS*MLVLTV
Trigger: CACTGTTAAGACCAGCATCAAAGAGGGTGGTGGGGC...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR TCA 72 bp TGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATaGGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: WGALTATGSHRE*GQNSQQAPQGQ
Trigger: CTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR TCA 72 bp GATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTaGTACAGATCCCTGGTAGCTGATCTTGCTTGGACA +
Preference number: 3 (lower is better)
Translates to: DPRAPPAGSHLA*YRSLVADLAWT
Trigger: TGTCCAAGCAAGATCAGCTACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR GCA 72 bp CCACAGAGGGTTCTTGTGGGCCTCGGGGAGCTTGCCTaGCTAAGGTTCTCATGGTCAGTTGTGCAGGTTCTG +
Preference number: 3 (lower is better)
Translates to: PQRVLVGLGELA*LRFSWSVVQVL
Trigger: CAGAACCTGCACAACTGACCATGAGAACCTTAGGCAGGCAAGCTCCCCGAGGCCCACAAGAACCCTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR-3UTR CAA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGGTTCTCATGGTCAGTaGTGCAGGTTCTGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQGSHGQ*CRFCPR
Trigger: CCTGGGGCAGAACCTGCACAACTGACCATGAGAACC...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR CCA 72 bp CTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTaGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAA +
Preference number: 3 (lower is better)
Translates to: LVLCDRGHTGLL*GALTATGSHRE
Trigger: TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR GCA 72 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATaGCTGACACAGGGCTTGTTTTATGTGACAGAGGAC +
Preference number: 3 (lower is better)
Translates to: AWTVPSAFVSMR*LTQGLFYVTED
Trigger: GTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGCTGCTGGCCACACCATaGGCAAGGCCACGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQLLATP*ARPRRP
Trigger: GGGCCTCCGTGGCCTTGCTCATGGTGTGGCCAGCAG...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTTCGTGGAGGCAGTGGTaGCTGGGTGTGTGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGSWRQW*LGVWSC
Trigger: GCACGACCACACACCCAGTCACCACTGCCTCCACGA...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTTTGGGTGCTTGGCCCTaGAGGGCTGGCAGGACGGTT +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGLGAWP*RAGRTV
Trigger: AACCGTCCTGCCAGCCCTTCAGGGCCAAGCACCCAA...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGTGGCACATGGGCAGGTaGGACAGCGGCACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TANRLLRARSSPGTLLKWWHMGR*DSGTGP
Trigger: AGGACCTGTGCCGCTGTCCCACCTGCCCATGTGCCA...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGTCCCTCCAGCCACTaGGCAGCACGCCTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSCPSSH*AARLWQ
Trigger: CTGCCAAAGGCGTGCTGCTCAGTGGCTGGAGGGACA...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGAGGGGACGCTGCAGGTaGCATCGGCCTCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQRGRCR*HRPHSE
Trigger: CTCTGAGTGAGGCCGATGTCACCTGCAGCGTCCCCT...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAAGTGGTCGTGCCTCCATaGGGAGGACTGGAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHREVVVPP*GGLEGP
Trigger: TGGGCCCTCCAGTCCTCCTCATGGAGGCACGACCAC...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTAGCCGGACAAACACCTaGATGAGGGGCACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGSRTNT*MRGTSC
Trigger: GCAGCTGGTGCCCCTCATGCAGGTGTTTGTCCGGCT...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTCAGCTCACAGAGAGGTaGAGAGGGGCATGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGQLTER*RGAWGG
Trigger: TCCACCCCATGCCCCTCTGCACCTCTCTGTGAGCTG...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCTCCCAGGCAGGGAGCTaGAGGCCGGGGCACAGTTGC +
Preference number: 4 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPSQAGS*RPGHSC
Trigger: GCAACTGTGCCCCGGCCTGCAGCTCCCTGCCTGGGA...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCGAGAGGAGTGGTGGGTaGGGACGACACGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLERSGG*GRHACP
Trigger: AGGACAAGCGTGTCGTCCCCACCCACCACTCCTCTC...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCGGGGTTGGCAGGTGGTaGAGAAGGTCTGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLGVGRW*RRSVCQ
Trigger: CTGGCACACAGACCTTCTCCACCACCTGCCAACCCC...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTAGAGGCAGTGGTGACTaGGTGTGTGGTCGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGRGSGD*VCGRAS
Trigger: GGAGGCACGACCACACACCCAGTCACCACTGCCTCT...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGCTCCATGAGGAGGACTaGAGGGCCCAGCAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TANRLLRARSSPGTLLKWLHEED*RAQQWS
Trigger: TGACCACTGCTGGGCCCTCCAGTCCTCCTCATGGAG...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGCTGGACACTGGGGTCTaGGGAGTGGTGCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQLDTGV*GVVLGR
Trigger: TCTCCCGAGCACCACTCCCCAGACCCCAGTGTCCAG...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTCTCGCAGTCACCCCCTaGGTCACAGGCACACACATC +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSLAVTP*VTGTHI
Trigger: GATGTGTGTGCCTGTGACTCAGGGGGTGACTGCGAG...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGGACAGGGTCTCAGTaGCTGCTCTGGTCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQRTGSQ*LLWSWR
Trigger: CCTCCACGACCAGAGCAGTCACTGAGACCCTGTCCT...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTGCTGGCTGGCTGTGTaGCTGTGCTGGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPCWLAV*LCWALK
Trigger: CTTCAAGGCCCAGCACAGTCACACAGCCAGCCAGCA...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCAGAGGACATTGGAGGTaGAGAGGAGGGGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLRGHWR*RGGAGT
Trigger: GGTACCTGCCCCTCCTCTTCACCTCCAATGTCCTCT...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTGACGGTTGGCACAGGTaGCATTGTCCACAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSDGWHR*HCPQAP
Trigger: CGGAGCCTGTGGACAATGTCACCTGTGCCAACCGTC...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAACAGGACCAAGCAGGGTaGGACGGCAGATGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHREQDQAG*DGRCPP
Trigger: CGGAGGACATCTGCCGTCGCACCCTGCTTGGTCCTG...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTGGTGTTGGAGAAGGCTaGTCCTGTGCCCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSGVGEG*SCALHH
Trigger: GTGGTGGAGGGCACAGGAGCAGCCTTCTCCAACACC...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGCTGGGTGTGTGGTCGTaGCTCCATGAGGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQLGVWS*LHEEDW
Trigger: CCAGTCCTCCTCATGGAGGCACGACCACACACCCAG...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAGAAGGGCTGGCTGGCTaGGCACTGTGGGTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPEGLAG*ALWVAA
Trigger: GGCTGCTACCCACAGTGCCCAGCCAGCCAGCCCTTC...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCAGGAGGCAGTGGTGACTaGGTGTGTGGTCGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPGGSGD*VCGRAS
Trigger: GGAGGCACGACCACACACCCAGTCACCACTGCCTCC...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAAAGGCTGGGAGTGCCCTaGAGAGGTGGACCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHRERLGVP*RGGPGS
Trigger: ACTGCCAGGTCCACCTCTCCAGGGCACTCCCAGCCT...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCACTCAGGGCTGCTGGCTaGCTGTGTGACTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPLRAAG*LCDCAG
Trigger: CCCAGCACAGTCACACAGCCAGCCAGCAGCCCTGAG...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGGAGCAGTGGACATGGTaGCCATGGGTGACGAGGTAC +
Preference number: 4 (lower is better)
Translates to: TANRLLRARSSPGTLLKWEQWTW*PWVTRY
Trigger: GTACCTCGTCACCCATGGCCACCATGTCCACTGCTC...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGGAGGTCAGTGTGCTaGACACTGGGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQWRSVC*TLGSGE
Trigger: CTCCCCAGACCCCAGTGTCCAGCACACTGACCTCCA...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGTGGTCCTCGCAGAGTTaGGAGCGCTGGGGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSEWSSQS*ERWGLE
Trigger: CTCTAACCCCCAGCGCTCTCAACTCTGCGAGGACCA...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTTGGGGCAGGAGGCTTaGGTCTTCCAGGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSLGQEA*VFQVLE
Trigger: CTCCAACACCTGGAAGACTCAAGCCTCCTGCCCCAA...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTCATTCAGCCCCGTGGTaGCCCACTGAGGCATTGTTA +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGHSAPW*PTEALL
Trigger: TAACAATGCCTCAGTGGGTCACCACGGGGCTGAATG...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAACCTGGCAGTCACCACTaGTGGGCTGCCAGAGGATTC +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHREPGSHH*WAARGF
Trigger: GAATCCTCTGGCAGCCCATCAGTGGTGACTGCCAGG...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTGCTGTGGAGCTGGCTaGGGAAACTGTAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPCCGAG*GNCREL
Trigger: GAGCTCCCTACAGTTTCCTCAGCCAGCTCCACAGCA...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTAGGACACTGAGGTTGTaGAAGGGGCCAGGGGAGACT +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSRTLRL*KGPGET
Trigger: AGTCTCCCCTGGCCCCTTTCACAACCTCAGTGTCCT...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGCCTTCAGGGCAGGTaGAGCCATCCACCGTCACAA +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQCLQGR*SHPPSQ
Trigger: TTGTGACGGTGGATGGCTGCACCTGCCCTGAAGGCA...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTAGTCCCCGCCTGACATaGCAGCCTCTGGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLSPRLT*QPLDGS
Trigger: AGAGCCATCCAGAGGCTGGCATGTCAGGCGGGGACT...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAGCGAAGAGGGTCTTCTaGTGGTGTCAGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRAKRVF*WCQAGR
Trigger: CCTCCCAGCCTGACACCAGCAGAAGACCCTCTTCGC...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGATGTGGATGCTTGGGTaGTTGGCCCTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQMWMLG*LALKGW
Trigger: CCAGCCCTTCAGGGCCAAGCACCCAAGCATCCACAT...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCAGGCACCTGGCCACTGTaGAGTTCTCCAGGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPGTWPL*SSPGSK
Trigger: CTTGGACCCTGGAGAACTGCACAGTGGCCAGGTGCC...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTGCTGAGCTAAGCAGCTaGTGCTACTGTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGAELSS*CYCSQA
Trigger: TGCCTGGGAACAGTAGCAGCAGCTGCTTAGCTCAGC...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCCCTCGAGTTGCAGGATaGTGGATGCAGGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPPRVAG*WMQGST
Trigger: TGTGGACCCCTGCATCCAGCATCCTGCAACTCGAGG...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTAGCTGGGGCAGCAGCTaGTATTCTCATGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGSWGSS*YSHGSG
Trigger: TCCAGACCCATGAGAATAGCAGCTGCTGCCCCAGCT...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGGCCGGACAAACACACTaGTCTTCCTGTCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: TANRLLRARSSPGTLLKWAGQTH*SSCPRT
Trigger: TGTCCTGGGACAGGAAGACCAGTGTGTTTGTCCGGC...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGATTGGGGTTGGCAGGTaGTGGAGGAGGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSEIGVGR*WRRSQG
Trigger: GCCCTGAGACCTCCTCCACCACCTGCCAACCCCAAT...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGCCAGGTCCTGCTGTaGAGCTGGCTGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSCQVLL*SWLRKL
Trigger: CAGTTTCCTCAGCCAGCTCCACAGCAGGACCTGGCA...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCTGGGTGTGCCTGTaGCTAGAGAAGAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLLWVCL*LEKKLW
Trigger: CCACAGCTTCTTCTCTAGCCACAGGCACACCCAGAG...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCACAGGGTCTGGGGAATaGAGCTGGCAGTTTCTGTCG +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLTGSGE*SWQFLS
Trigger: CGACAGAAACTGCCAGCTCCATTCCCCAGACCCTGT...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGGACCATGTGGATGCTTaGGTGCTTGGCCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQDHVDA*VLGPEG
Trigger: CCCTTCAGGGCCAAGCACCCAAGCATCCACATGGTC...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCAGGTCACCTGGCTGCTaGGGGAAACTTTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPRSPGC*GKLWGC
Trigger: ACACCCCCAAAGTTTCCCCCAGCAGCCAGGTGACCT...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTCAGAGGGGCATGGGGTaGAGGTCAGTGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLQRGMG*RSVCWT
Trigger: TGTCCAGCACACTGACCTCCACCCCATGCCCCTCTG...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTACCGCGTGGCCCTCTaGTGTGAGGCAGGCATTTTG +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSYRVAL*CEAGIL
Trigger: CAAAATGCCTGCCTCACACCAGAGGGCCACGCGGTA...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTCAGCCTGGTTCTGGTTaGAGTTTCCACACAGACCAC +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGQPGSG*SFHTDH
Trigger: GTGGTCTGTGTGGAAACTTCAACCAGAACCAGGCTG...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTGACTGTGTTGGGCCTTaGAGTGGACCCAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSDCVGP*SGPSLC
Trigger: ACACAGACTGGGTCCACTTCAAGGCCCAACACAGTC...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTAGCAAGGATGAGGTTTaGGTCTCTCTGGGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGSKDEV*VSLGVP
Trigger: AGGCACACCCAGAGAGACTCAAACCTCATCCTTGCT...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTGGGAAATCCAGGTGCTaGTGTGGAGGTGGTAGACAG +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSGKSRC*CGGGRQ
Trigger: CTGTCTACCACCTCCACATCAGCACCTGGATTTCCC...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCAAGTTGTAGTACACACTaGGGGCACGGGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPSCSTH*GHGDRR
Trigger: CCTCCTGTCCCCGTGCCCTCAGTGTGTACTACAACT...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGCGTGGCCCTCTGGTGTaGGGCAGGCATTTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLRGPLV*GRHFAG
Trigger: GCCTGCAAAATGCCTGCCTCACACCAGAGGGCCACG...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCTGGACCTTGCTCTCCTaGCAGCAGGTGCACTGGCGT +
Preference number: 4 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPWTLLS*QQVHWR
Trigger: ACGCCAGTGCACCTGCTGTCAGGAGAGCAAGGTCCA...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGCGCCTGACACTCTGTaGTCTTCTGCATCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLAPDTL*SSASGL
Trigger: GAGCCCTGATGCAGAAGAGCACAGAGTGTCAGGCGC...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTTTGGGCCCGGCAGAGTaGTGCATAGGCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPLGPAE*CIGLQA
Trigger: AGCCTGGAGGCCTATGCAGCACTCTGCCGGGCCCAA...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCAGCCTCCAGTGGCATTaGGCCAGTTGGTACATACAC +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLSLQWH*ASWYIH
Trigger: GTGTATGTACCAACTGGCGCAATGCCACTGGAGGCT...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCTTGCAGGATGCTGGATaGAGGGGTCCACAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPLQDAG*RGPQGL
Trigger: CAGGCCCTGTGGACCCCTGCATCCAGCATCCTGCAA...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCGCAGAAGCAGCCCTCTaGCAGCATCCCAGTTGTACT +
Preference number: 4 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPAEAAL*QHPSCT
Trigger: AGTACAACTGGGATGCTGGCAGAGGGCTGCTTCTGC...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGGAGGGTAGGACATCCTaGCACTGCTCTGTAGGACCA +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQEGRTS*HCSVGP
Trigger: TGGTCCTACAGAGCAGTGCCAGGATGTCCTACCCTC...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTCCACCGTGTGTACAGTaGCACTGCTCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPPPCVQ*HCSRGR
Trigger: CCTGCCCCTGGAGCAGTGCCACTGTACACACGGTGG...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGGGGCTAACAGTGGCATaGCAGGCTGAGAAAACTCCT +
Preference number: 4 (lower is better)
Translates to: TANRLLRARSSPGTLLKWGLTVA*QAEKTP
Trigger: AGGAGTTTTCTCAGCCTGCCATGCCACTGTTAGCCC...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGAGGGCACTCCTCCACTaGCACACAGTGGTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSERALLH*HTVVLV
Trigger: GACAAGGACCACTGTGTGCCAGTGGAGGAGTGCCCT...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCCTGCTGGTGTCAGGCTaGGAGGGAGTGGTACTTATG +
Preference number: 4 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPLLVSG*EGVVLM
Trigger: CATAAGTACCACTCCCTCCCAGCCTGACACCAGCAG...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAAGTGCCCTGGAGAGGTaGACCTGGCAGTCACCACTG +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPSALER*TWQSPL
Trigger: CAGTGGTGACTGCCAGGTCCACCTCTCCAGGGCACT...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCATCCCAGAAGTGGCAGTaGGGGCAGTTCCTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPSQKWQ*GQFLLW
Trigger: CCACAACAGGAACTGCCCCCACTGCCACTTCTGGGA...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCACGTGGAGACTGTGCTaGGAAATCCAGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLTWRLC*EIQVLM
Trigger: CATCAGCACCTGGATTTCCCAGCACAGTCTCCACGT...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTTCTGGTGGCCATGGTTaGGGTACTAGAAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGSGGHG*GTRRET
Trigger: AGTCTCCCTTCTAGTACCCCAACCATGGCCACCAGA...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGTGTTGGGCAAAGGCTTaGAGGACAGGGTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQCWAKA*RTGSGE
Trigger: TTCCCCAGACCCTGTCCTCCAAGCCTTTGCCCAACA...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGGAGGGCTCAGAAGTaGTCAGGGAGGTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHREWRAQK*SGRWRW
Trigger: CCATCTCCACCTCCCTGACCACTTCTGAGCCCTCCA...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAAGGTGCAGAGGGGCATaGGGTGGAGGTCAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPRCRGA*GGGQCA
Trigger: AGCACACTGACCTCCACCCCATGCCCCTCTGCACCT...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTGCTCTCACACTTCACTaGCTCACACTGTACCGACAC +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGALTLH*LTLYRH
Trigger: GTGTCGGTACAGTGTGAGCCAGTGAAGTGTGAGAGC...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCATCAGGGCAAGATGTaGGGATTGGGGTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLHQGKM*GLGSAH
Trigger: ATGTGCTGACCCCAATCCCCACATCTTGCCCTGATG...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCGGTATCCACACAGGGTaGACTGCACTCTCGGTATTC +
Preference number: 4 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPGIHTG*TALSVF
Trigger: GAATACCGAGAGTGCAGTTCACCCTGTGTGGATACC...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCAACCTACAGCTGGTGTTaGAGGACTCTCCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPTYSWC*RTLQGH
Trigger: ATGCCCCTGGAGAGTCCTTCAACACCAGCTGTAGGT...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATCATCTGGTCCTCATTaGAGAAGGGCTGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHRESSGPH*RRAGWL
Trigger: CAGCCAGCCAGCCCTTCTTCAATGAGGACCAGATGA...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAGGCTCTGTTCACTGTTaGAGCAACTCAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRGSVHC*SNSAQR
Trigger: CCTCTGGGCTGAGTTGCTTCAACAGTGAACAGAGCC...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGACCTGGTTTGTGAAGTaGATACTGCTGTTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: TANRLLRARSSPGTLLKWTWFVK*ILLLSG
Trigger: CCCGGACAACAGCAGTATTCACTTCACAAACCAGGT...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTTCTGGGCCATACACCTaGTGTCCTGAGGCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLSGPYT*CPEASH
Trigger: GTGAGAAGCCTCAGGACATCAGGTGTATGGCCCAGA...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCATGCTGGCTGGCTGTGTaGCTGTGTTGGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPCWLAV*LCWALK
Trigger: CTTCAAGGCCCAACACAGTCACACAGCCAGCCAGCA...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGGTGGACAGAGATGTTaGGGAGACAGTGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLGGQRC*GDSASC
Trigger: ACAGCTGGCACTGTCTCCTCAACATCTCTGTCCACC...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCCCGGCTCAAGGAGAATaGTTTGATTGTTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPPAQGE*FDCCPG
Trigger: GCCAGGGCAACAATCAAATCATTCTCCTTGAGCCGG...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGACTTTGATAGGCAAGTaGCGGTTGGCACAGGTGACA +
Preference number: 4 (lower is better)
Translates to: TANRLLRARSSPGTLLKWTLIGK*RLAQVT
Trigger: TGTCACCTGTGCCAACCGTCACTTGCCTATCAAAGT...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTACAGATGTCCATGCGTaGGTTGAAGAGGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGTDVHA*VEEELV
Trigger: AACCAGCTCCTCTTCAACTCACGCATGGACATCTGT...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGGGAAGTCACCCCACGTaGTGCACACTCTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSEGSHPT*CTLSHC
Trigger: ACAATGGGAGAGTGTGCAGCACGTGGGGTGACTTCC...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTGCTGACAAGGGCATCTaGGTAAAGATGGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGADKGI*VKMEFR
Trigger: CCTGAACTCCATCTTTACGCAGATGCCCTTGTCAGC...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCATGTCATTCAGGAAGGTaGCTTCAGGGCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPCHSGR*LQGRCS
Trigger: GCTGCACCTGCCCTGAAGGCACCTTCCTGAATGACA...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGACCACACAGGCACCCATaGAGGGCTTGTTGGTGCATT +
Preference number: 4 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRPHRHP*RACWCI
Trigger: AATGCACCAACAAGCCCTGCATGGGTGCCTGTGTGG...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTCTTGCGGTAAGGGTTTaGAATGCAGGGGTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLLAVRV*NAGVLG
Trigger: CCCAAGGACCCCTGCATTGCAAACCCTTACCGCAAG...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCAGTTTGTGGCAAGGGGTaGCAGGGTGGTGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPVCGKG*QGGGEC
Trigger: ACATTCACCACCACCCTGGCACCCCTTGCCACAAAC...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCATCACACTGGACCACCTaGTCTAGAGTTTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPSHWTT*SRVSRG
Trigger: GCCCCTGGAAACTCTAGAGCAGGTGGTCCAGTGTGA...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGCTACATCATGGACCTTaGTCTCCTGACAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQLHHGP*SPDSRC
Trigger: GCACCTGCTGTCAGGAGAGCAAGGTCCATGATGTAG...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCCAGCGGCACAGGTCCTaGACACAGGCATCCAAGTAC +
Preference number: 4 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPQRHRS*TQASKY
Trigger: GTACTTGGATGCCTGTGTCCAGGACCTGTGCCGCTG...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTGCCACACACTTCATCTaGTCCTCATTGAAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGATHFI*SSLKKG
Trigger: GCCCTTCTTCAATGAGGACCAGATGAAGTGTGTGGC...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGCAGGCTGGGAGGGAGTaGTACTTATGCCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSEQAGRE*YLCPRS
Trigger: TGACCTTGGGCATAAGTACCACTCCCTCCCAGCCTG...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAACTCCTGGGTGGTTCTaGGCCATACACCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRTPGWF*AIHLMS
Trigger: GGACATCAGGTGTATGGCCCAGAACCACCCAGGAGT...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCAAGTGAATTGGTAGTGTaGGGACTGCTGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPSELVV*GLLGGR
Trigger: CCTGCCTCCCAGCAGTCCCCACACTACCAATTCACT...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGTCAGGGAGGTGGAGATaGTTGTCATGCTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQSGRWR*LSCWTE
Trigger: CTCTGTCCAGCATGACAACCATCTCCACCTCCCTGA...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTCCCAGTCTGTGTGCCTaGTCCTGCTGTGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPPSLCA*SCCGAD
Trigger: GTCAGCTCCACAGCAGGACCAGGCACACAGACTGGG...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTTCCTGGCCCAGCTTCTaGAAGGATATGTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGSWPSF*KDMLGK
Trigger: CTTTCCCAACATATCCTTCCAGAAGCTGGGCCAGGA...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGATGGGATGGATGGATCTaGTGGCCATGGTTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRWDGWI*WPWLGY
Trigger: GTACCCCAACCATGGCCACCAGATCCATCCATCCCA...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGCAGTGGTCAGGGAGGTaGAGGAGTATGACTTGCTTA +
Preference number: 4 (lower is better)
Translates to: TANRLLRARSSPGTLLKWQWSGR*RSMTCL
Trigger: TAAGCAAGTCATACTCCTCCACCTCCCTGACCACTG...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGCTCCATGAGGAGGACTaGAGGGCTCAGAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSELHEED*RAQKWS
Trigger: TGACCACTTCTGAGCCCTCCAGTCCTCCTCATGGAG...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAAACATTCACTCCGGGGTaGTTCTGGGCCATACACCTG +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHRETFTPG*FWAIHL
Trigger: CAGGTGTATGGCCCAGAACCACCCCGGAGTGAATGT...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTGTACTCCTTAGTGGGTaGACAGGAGAGGTCACACAA +
Preference number: 4 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGVLLSG*TGEVTQ
Trigger: TTGTGTGACCTCTCCTGTCCACCCACTAAGGAGTAC...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGGAGTTGAAGAGGAGCTaGTTCTCAGGGCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQELKRS*FSGQKQ
Trigger: CTGCTTCTGCCCTGAGAACCAGCTCCTCTTCAACTC...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGGTCGACAGCTGTAGCTaGGGCAGCAGCTGCTATTCT +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSEVDSCS*GSSCYS
Trigger: AGAATAGCAGCTGCTGCCCCAGCTACAGCTGTCGAC...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGGTGTACTTGAAGCCCTaGGGACAAGAGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQVYLKP*GQEVVQ
Trigger: CTGTACCACCTCTTGTCCCCAGGGCTTCAAGTACAC...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCGGCATCCCAAGTGTCTaGCATCGTCCAGCACAGTTC +
Preference number: 4 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPGIPSV*HRPAQF
Trigger: GAACTGTGCTGGACGATGTCAGACACTTGGGATGCC...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTATGCTGAGTGCTCACTaGGGTGACTGTGAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLMLSAH*GDCERS
Trigger: ACTCCTCTCACAGTCACCTCAGTGAGCACTCAGCAT...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGGTGGTCGTGCCTCCATaGGGAGGACTGGAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLVVVPP*GGLEGS
Trigger: TGAGCCCTCCAGTCCTCCTCATGGAGGCACGACCAC...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTTGATGCTGGTCTTATGCTGTGGAGCTGGCTaGGGGAACTGTAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: TLLKWILIAPPPSLMLVLCCGAG*GNCREL
Trigger: GAGCTCCCTACAGTTCCCTCAGCCAGCTCCACAGCA...TAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACAGGCATCTGGAGGGATaGGCCTGTGGCACTCTGCGA +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNRHLEG*ACGTLR
Trigger: TCGCAGAGTGCCACAGGCTCATCCCTCCAGATGCCT...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCGGGATGAAGGTGACATaGCTTGTGGATGAGGATATG +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLGMKVT*LVDEDM
Trigger: CATATCCTCATCCACAAGGCATGTCACCTTCATCCC...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGATGTGGGACCCGCCTTaGACAGAGCAGGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQMWDPP*TEQVPG
Trigger: CCCTGGCACCTGCTCTGTGCAAGGCGGGTCCCACAT...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGATAGGAGGACAGGGCTaGACACATGCAGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSEIGGQG*THAVLT
Trigger: AGTGAGGACTGCATGTGTGCAGCCCTGTCCTCCTAT...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGAGCACATCTGGAAAGTaGCTCCCTGGTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQSTSGK*LPGPCC
Trigger: ACAACAAGGACCAGGGAGGCACTTTCCAGATGTGCT...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCTGGAGATGGTTGTCATaGTGGACAAGGAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLWRWLS*WTRKPL
Trigger: CAAAGGCTTCCTTGTCCAGCATGACAACCATCTCCA...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGAGCACATTGGGAAAGTaGCTCCCTGGTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQSTLGK*LPGPCC
Trigger: ACAACAAGGACCAGGGAGGCACTTTCCCAATGTGCT...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGCTCAATTTTCTCTGGTaGCTGGCACAAGGTCTTACC +
Preference number: 4 (lower is better)
Translates to: TANRLLRARSSPGTLLKWLNFLW*LAQGLT
Trigger: GGTAAGACCTTGTGCCAGGCACCAGAGAAAATTGAG...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGGGTGGAGGTCAGTGTaGTGGACACTGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQGWRSV*WTLGSG
Trigger: CCCAGACCCCAGTGTCCAGCACACTGACCTCCACCC...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTCCACTGGCACACAGTaGTCCTTGTCATTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQSTGTQ*SLSFRK
Trigger: CTTCCTGAATGACAAGGACCACTGTGTGCCAGTGGA...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTTGATGCTGGTCTTAAAGCTGAGCCGTTTGTaGCAAGGGGTGCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TLLKWILIAPPPSLMLVLKLSRL*QGVPGW
Trigger: CCACCCTGGCACCCCTTGCCACAAACGGCTCAGCTT...TAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCATGCCAGCCTCTGGATaGCTCTCATCATACCAAATG +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLMPASG*LSSYQM
Trigger: CATTTGGTATGATGAGAGCCATCCAGAGGCTGGCAT...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCTGTTGGGCAGAGGCTTaGAGGACAGTGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSCWAEA*RTVSGE
Trigger: CTCCCCAGACACTGTCCTCCAAGCCTCTGCCCAACA...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAAGAGATTTACAGCCTGTaGAGGTGGTCCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHREEIYSL*RWSLWL
Trigger: CAACCACAGGGACCACCTCCACAGGCTGTAAATCTC...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCTGGAGGTGGTTGGCTTaGCAGTGCTCGGAACATTGG +
Preference number: 4 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPWRWLA*QCSEHW
Trigger: CCAATGTTCCGAGCACTGCCAAGCCAACCACCTCCA...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTTGATGCTGGTCTTATGCCAGGTCCTGCTGTaGAGCTGGCTGAGGGAACTG +
Preference number: 4 (lower is better)
Translates to: TLLKWILIAPPPSLMLVLCQVLL*SWLREL
Trigger: CAGTTCCCTCAGCCAGCTCCACAGCAGGACCTGGCA...TAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTCACTTACACTTGGGTTaGCAGAGTGTTGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLHLHLG*QSVVPW
Trigger: CCAGGGCACAACACTCTGCCAACCCAAGTGTAAGTG...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAGGCACTCGATGTCCTTaGGCTGATCGCAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRGTRCP*ADRRRC
Trigger: ACATCTTCTGCGATCAGCCCAAGGACATCGAGTGCC...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCTGGACATGGTGGCCATaGGTGACGAGGTACAGTGGC +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSWTWWP*VTRYSG
Trigger: GCCACTGTACCTCGTCACCCATGGCCACCATGTCCA...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTATCAGGGAAGAGGAGTaGGGCTCACTGGAACTACTG +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLIREEE*GSLELL
Trigger: CAGTAGTTCCAGTGAGCCCCACTCCTCTTCCCTGAT...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCAACACTGAAGGTCACCTaGCTGCTGGGGGAAACTTTG +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPTLKVT*LLGETL
Trigger: CAAAGTTTCCCCCAGCAGCCAGGTGACCTTCAGTGT...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCGGGAAGATGCATGGCTaGAAAAGACAGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSGKMHG*KRQAWG
Trigger: CCCCCAGGCCTGTCTTTTCCAGCCATGCATCTTCCC...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGGCAGTCAGAAGCTATaGTGCCATCAGGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQGSQKL*CHQAGG
Trigger: GCCGCCGGCCTGATGGCACCATAGCTTCTGACTGCC...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCGAGTTGCAGGATGCTaGATGCAGGGGTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNRVAGC*MQGSTG
Trigger: CCCTGTGGACCCCTGCATCCAGCATCCTGCAACTCG...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGATGGATTGTCAGCACTaGGCCAGGTCACAGTCACAA +
Preference number: 4 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQMDCQH*ARSQSQ
Trigger: TTGTGACTGTGACCTGGCCCAGTGCTGACAATCCAT...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGTGGCAGGGACCCCCTaGGAAGGTTGTACCAACCCC +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQVAGTP*EGCTNP
Trigger: GGGGTTGGTACAACCTTCCCAGGGGGTCCCTGCCAC...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGAGGCAGGTGCATGTGTaGCAGGGACCCCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLRQVHV*QGPPGK
Trigger: CTTCCCAGGGGGTCCCTGCCACACATGCACCTGCCT...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCTCACCCAGGTTTCATTaGGCTGTACCGCGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSSPRFH*AVPRGP
Trigger: AGGGCCACGCGGTACAGCCCAATGAAACCTGGGTGA...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGTTCTCAGCCATACAGTaGTATGCAGTGCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: TANRLLRARSSPGTLLKWFSAIQ*YAVQLS
Trigger: GGACAACTGCACTGCATACCACTGTATGGCTGAGAA...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGCTCCTGAGCTTTCCGTaGGCATGGAGCACCACTCCC +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQLLSFP*AWSTTP
Trigger: GGGAGTGGTGCTCCATGCTCACGGAAAGCTCAGGAG...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGACACCAGACCAGAGCTaGCATCACACTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQTPDQS*HHTSLS
Trigger: AGAAAGTGAAGTGTGATGTCAGCTCTGGTCTGGTGT...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCAACTGTAGGGAGCTCTaGGGTGGTCTTGGTATGAGG +
Preference number: 4 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPNCREL*GGLGMR
Trigger: CCTCATACCAAGACCACCTCAGAGCTCCCTACAGTT...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCTGCTGTGGAGCTGACTaGGGAAACTGTAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSCCGAD*GNCREL
Trigger: GAGCTCCCTACAGTTTCCTCAGTCAGCTCCACAGCA...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCTCCAGAGGAAGAAGGTaGCTCTGTGGTACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPSRGRR*LCGTGR
Trigger: CCTACCAGTACCACAGAGTCACCTTCTTCCTCTGGA...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGTGGTCCCTGTGGTTGTaGGGGCTGAGGAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQWSLWL*GLRRDQ
Trigger: CTGGTCTCTCCTCAGCCCTCACAACCACAGGGACCA...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGGGTATTGGCTCCTCTaGTGGCAACTTGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLGYWLL*WQLACC
Trigger: ACAACAAGCAAGTTGCCATCAGAGGAGCCAATACCC...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAGGAGGAGGCTGTCCATaGACTTGTGCTTGGTTTACC +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPGGGCP*TCAWFT
Trigger: GGTAAACCAAGCACAAGTTCATGGACAGCCTCCTCC...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTGACTATGCTGGGCCTTaGAGTGGACCCAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPDYAGP*SGPSLC
Trigger: ACACAGACTGGGTCCACTTCAAGGCCCAGCATAGTC...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCATCCACCTTGTCCACTaGCATTGGGGTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSIHLVH*HWGWQV
Trigger: CACCTGCCAACCCCAATGTCAGTGGACAAGGTGGAT...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCGCAGGACGGTTAGTCTaGAAGGTGGACTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSAGRLV*KVDSML
Trigger: GAGCATGGAGTCCACCTTTCAGACTAACCGTCCTGC...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTGCGAGGTGTACAGCCTaGGTCAGGAAGTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPARCTA*VRKCRP
Trigger: TGGTCTACACTTCCTGACTCAGGCTGTACACCTCGC...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGGGCATGGCAGGTCTTTaGACTTCCACAGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLGMAGL*TSTVLR
Trigger: TCGGAGGACTGTGGAAGTGCAAAGACCTGCCATGCC...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCTCTGGGCCCAGGACTTaGGGTAAGGGTTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSSGPRT*GKGLQC
Trigger: GCATTGCAAACCCTTACCGCAAGTCCTGGGCCCAGA...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCAGGGAGTGGTACTTATaGCCAAGGTCAGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPREWYL*PRSERS
Trigger: GCTCCTCTCTGACCTTGGGCATAAGTACCACTCCCT...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTTGATGCTGGTCTTAGAGCCTGTGGCACTCTaGGAAGACCTGGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: TLLKWILIAPPPSLMLVLEPVAL*EDLAQH
Trigger: ATGCTGAGCCAGGTCTTCGCAGAGTGCCACAGGCTC...TAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTACAGTGGTATGCAGTaGAGTTGTCCACAGGACTGT +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQYSGMQ*SCPQDC
Trigger: ACAGTCCTGTGGACAACTGCACTGCATACCACTGTA...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCAAGCCATACAGTGGTATaGAGTGCAGTTGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPSHTVV*SAVVHR
Trigger: CCTGTGGACAACTGCACTGCATACCACTGTATGGCT...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGAATATTCGGCAAAAGTaGCACATGGGCAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSENIRQK*HMGRWD
Trigger: GTCCCACCTGCCCATGTGCCACTTTTGCCGAATATT...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTGAGTCTTCCAGGTGTTaGAGAAGGCTGCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPESSRC*RRLLLC
Trigger: GCACAGGAGCAGCCTTCTCCAACACCTGGAAGACTC...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCGGCGTCTGGGCAGGATaGGGAGAACTTCCAGCTATT +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSGVWAG*GELPAI
Trigger: AATAGCTGGAAGTTCTCCCCATCCTGCCCAGACGCC...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAAGTGCAGAGACAACTCTaGCAATTCTCAGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHREVQRQL*QFSAVG
Trigger: CCCTACAGCTGAGAATTGCCAGAGTTGTCTCTGCAC...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCTCAGGGCTGCTGATTaGCTGTGTGACTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNLRAAD*LCDCAG
Trigger: CCCAGCACAGTCACACAGCCAATCAGCAGCCCTGAG...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACATTCACTCCTGGGTaGTTCTGGGCCATACACCTG +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPTFTPG*FWAIHL
Trigger: CAGGTGTATGGCCCAGAACCACCCAGGAGTGAATGT...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGGAGTGGTCAGGGAGGTaGAGATGGTTGTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLEWSGR*RWLSCW
Trigger: CCAGCATGACAACCATCTCCACCTCCCTGACCACTC...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTATTGGGGTTGGCAGGTaGTGGAGAAGGTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPIGVGR*WRRSVC
Trigger: GCACACAGACCTTCTCCACCACCTGCCAACCCCAAT...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAGCTAGTGGGAGAGGCTaGAAAGGTAGAGAGACTAGA +
Preference number: 4 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRASGRG*KGRETR
Trigger: TCTAGTCTCTCTACCTTTCCAGCCTCTCCCACTAGC...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGTGGTAGAAATGGGATaGATGGATCTGGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLVVEMG*MDLVAM
Trigger: CATGGCCACCAGATCCATCCATCCCATTTCTACCAC...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCTCAGGGCTGCTGACTaGCTGTGTGACTATGCTGGG +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNLRAAD*LCDYAG
Trigger: CCCAGCATAGTCACACAGCCAGTCAGCAGCCCTGAG...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCACACTCAATTTTCTCTaGTGCCTGGCACAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLTLNFL*CLAQGL
Trigger: AAGACCTTGTGCCAGGCACCAGAGAAAATTGAGTGT...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAGATGGGGAAGATGCATaGCTGGAAAAGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPDGEDA*LEKTGL
Trigger: CAGGCCTGTCTTTTCCAGCCATGCATCTTCCCCATC...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAAAGTGGCAAGGCTCCTaGTCCCACACTTTGATAGGC +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPKWQGS*SHTLIG
Trigger: GCCTATCAAAGTGTGGGACCAGGAGCCTTGCCACTT...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCGCAGCACTGCTCTaGCACCAGCGTGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNPAALL*HQRVLE
Trigger: TTCAAGTACACGCTGGTGCCAGAGCAGTGCTGCGGG...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR CAA 72 bp ACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTaGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: TGLVLCDRGHTG*LWGALTATGSH
Trigger: GTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGGACATGCCTTGTGGATaGGGATATGGAGTCACTATA +
Preference number: 4 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQDMPCG*GYGVTI
Trigger: TATAGTGACTCCATATCCTCATCCACAAGGCATGTC...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTTTAGTGTCACTGCTTTaGGGCAGTTCTCCGTATCTG +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLLVSLL*GSSPYL
Trigger: CAGATACGGAGAACTGCCTCAAAGCAGTGACACTAA...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGACTGGCAAGAACTCACTaGATAGAAGTAGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRLARTH*IEVALG
Trigger: ACCAAGGGCTACTTCTATTCAGTGAGTTCTTGCCAG...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCTCTCCACAAAGATCTTaGTGGTCTTGGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPSPQRS*WSWSRW
Trigger: CCACCTGCTCCAAGACCATCAAGATCTTTGTGGAGA...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAAGTCTGCTGTTTGAAGTaGATGGCACTGTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHREVCCLK*MALFAL
Trigger: CAAGGCAAACAGTGCCATTCACTTCAAACAGCAGAC...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCTTTCTCCATTGGCCCTaGTATTCTCATATGTCTCGA +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLFLHWP*YSHMSR
Trigger: TCGAGACATATGAGAATATCAGGGCCAATGGAGAAA...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTCACGGATGTGGTAGTTaGAACAGATTTGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSHGCGS*NRFGCH
Trigger: GTGACAACCAAATCTGTTTCAACTACCACATCCGTG...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCAGTAGTCCAGTTGTGCTaGTACAGCTGGTATCTTCCT +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPVVQLC*YSWYLP
Trigger: AGGAAGATACCAGCTGTATCAGCACAACTGGACTAC...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGACACCAGACCAGAGTTaGCATCACACTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQTPDQS*HHTSLS
Trigger: AGAAAGTGAAGTGTGATGTCAACTCTGGTCTGGTGT...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCAGTTGCCCAAATGCCTaGCAGAAACAGGGTGATGGG +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSSCPNA*QKQGDG
Trigger: CCCATCACCCTGTTTCTGTCAGGCATTTGGGCAACT...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAGGTGGATCTCTCTCATaGGCACGGAGGTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPGGSLS*ARRYSY
Trigger: ATAACTGTACCTCCGTGCTCATGAGAGAGATCCACC...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCACAATGGTGGAAATGTTaGCACTCATTGTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPQWWKC*HSLWWP
Trigger: GGGCCACCACAATGAGTGTCAACATTTCCACCATTG...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGTGTCCATGCGTGAGTTaGAGAGGAGCTGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLCPCVS*RGAGSQ
Trigger: CTGAGAACCAGCTCCTCTTCAACTCACGCATGGACA...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGACCCTGGCTCTCTaGTGGCCACACCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLLTLAL*WPHHEQ
Trigger: TTGCTCATGGTGTGGCCAGCAGAGAGCCAGGGTCAG...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGGGACCATCCAGCTTCTaGAAGTTTCCAAACTGCACA +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSEGPSSF*KFPNCT
Trigger: TGTGCAGTTTGGAAACTTGCAGAAGCTGGATGGTCC...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGCAGGGTAGTTCTCTaGCCGACACTCAATTTTCTC +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHRECRVVL*PTLNFL
Trigger: GAGAAAATTGAGTGTCGGGCAGAGAACTACCCTGCA...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTAGTGCCCCCATCCACTaGAGAAGCATTCACACTCGT +
Preference number: 4 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPSAPIH*RSIHTR
Trigger: ACGAGTGTGAATGCTTCTGCAGTGGATGGGGGCACT...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAGGCAGGTGGTTGAATTaGAAACACACAGTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPGRWLN*KHTVSR
Trigger: CCGAGACACTGTGTGTTTGCAATTCAACCACCTGCC...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACTTGGAGGACAGTGTCTaGGGAGTGGAGGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNLEDSV*GVEVAV
Trigger: AACTGCCACCTCCACTCCCCAGACACTGTCCTCCAA...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTAGTAACCTTGAGAGGTaGACCTGGCAGTCACCACTG +
Preference number: 4 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPSNLER*TWQSPL
Trigger: CAGTGGTGACTGCCAGGTCCACCTCTCAAGGTTACT...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGGGAACTGTCTGCCAGTaGAGGTGGTTGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLGTVCQ*RWLAWQ
Trigger: CTGCCAAGCCAACCACCTCCACTGGCAGACAGTTCC...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGGAAGATGCTGTGATATaGGGCCTACTAGGCAACATA +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQEDAVI*GLLGNI
Trigger: TATGTTGCCTAGTAGGCCCCATATCACAGCATCTTC...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGTGCTTGTTGCTGCTGTaGTGGAGGCCGAGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLCLLLL*WRPSED
Trigger: GTCCTCACTCGGCCTCCACCACAGCAGCAACAAGCA...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp ACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTTGATGCTGGTCTTAAAAGAGCAGTGGACATaGTGGCCATGGGTGACGAGG +
Preference number: 4 (lower is better)
Translates to: TLLKWILIAPPPSLMLVLKEQWT*WPWVTR
Trigger: CCTCGTCACCCATGGCCACCATGTCCACTGCTCTTT...TAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGAGGAAGAAAGAGCAGTaGACATGGTGGCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLRKKEQ*TWWPWV
Trigger: CACCCATGGCCACCATGTCCACTGCTCTTTCTTCCT...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGTGTTGCCCTGGCACCTaGCCACTGTGCAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLCCPGT*PLCSSP
Trigger: TGGAGAACTGCACAGTGGCCAGGTGCCAGGGCAACA...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCTGTGGGGGTTTATCCTaGCTCTCACACTTCACTGGC +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSCGGLS*LSHFTG
Trigger: GCCAGTGAAGTGTGAGAGCCAGGATAAACCCCCACA...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCAGCTTCTGTGCACTGTaGGGGTTTATCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSSFCAL*GFILAL
Trigger: GAGAGCCAGGATAAACCCCCACAGTGCACAGAAGCT...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCACAGCTGCTATTCTCATaGGTCTGGACCAGCTCATAT +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPQLLFS*VWTSSY
Trigger: ATATGAGCTGGTCCAGACCCATGAGAATAGCAGCTG...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCCCCCAGGTCTATATGTaGCCTCATTGTGTATGCAGG +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSPQVYM*PHCVCR
Trigger: CCTGCATACACAATGAGGTCACATATAGACCTGGGG...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAAGTGGACCTGGTTTGTaGAGTGAATACTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRSGPGL*SEYCCC
Trigger: ACAACAGCAGTATTCACTTCACAAACCAGGTCCACT...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACATCCACTTTGTCCACTaGCATTGGGGTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNIHFVH*HWGWQV
Trigger: CACCTGCCAACCCCAATGTCAGTGGACAAAGTGGAT...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGTCCATTAATGCTAGATaGAGGGTAGTCTACATCGAT +
Preference number: 4 (lower is better)
Translates to: TANRLLRARSSPGTLLKWSINAR*RVVYID
Trigger: ATCGATGTAGACTACCCTTCATCTAGCATTAATGGA...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCGTCTACTTTGAGTTGTaGATGAAGTTGAGGGTATTG +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLVYFEL*MKLRVL
Trigger: CAATACCCTCAACTTCATTCACAACTCAAAGTAGAC...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGGTAGAGGGTCTACTTTaGGTTGTGAATGAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQVEGLL*VVNEVE
Trigger: CTCAACTTCATTCACAACTCAAAGTAGACCCTCTAC...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGAAGGTCCCGATTGGTTaGTATTTTTGCATATCAGCC +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQKVPIG*YFCISA
Trigger: GGCTGATATGCAAAAATATCAACCAATCGGGACCTT...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGGCCAGTGGCTATAGGTaGAGTCTCAGTGGTCAACAT +
Preference number: 4 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLASGYR*SLSGQH
Trigger: ATGTTGACCACTGAGACTTCACCTATAGCCACTGGC...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCATCAAGGAGAATGATTTaGTTGTTGCCCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPSRRMI*LLPWHL
Trigger: CAGGTGCCAGGGCAACAATCAAATCATTCTCCTTGA...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCAGTGAAGCTACTATCTaGACATTTCTTGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: EAKTANRLLRARSSPGTLSEATI*TFLGQD
Trigger: ATCCTGACCAAGAAATGTGCAGATAGTAGCTTCACT...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTTGATGCTGGTCTTAACAGGGCTGCACACATaGAGTCCTCACTGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: TLLKWILIAPPPSLMLVLTGLHT*SPHCSH
Trigger: GTGAGAACAGTGAGGACTGCATGTGTGCAGCCCTGT...TAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTTCACCACTGATGGGCTaGCAGAGGATTCTAGACTCT +
Preference number: 4 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPSPLMG*QRILDS
Trigger: AGAGTCTAGAATCCTCTGGCAGCCCATCAGTGGTGA...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGTCTGGTCTTCATTTTTaGAGACCAGCCCCGTTTCTA +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSESGLHF*RPAPFL
Trigger: TAGAAACGGGGCTGGTCTGCAAAAATGAAGACCAGA...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTAACCTCACGAAATACTaGATAGACCTCAAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLNLTKY*IDLKVP
Trigger: GGGGACTTTGAGGTCTATGCAGTATTTCGTGAGGTT...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATCATCAGCCTGGTTCTaGTTGAAGTTTCCACACAGA +
Preference number: 4 (lower is better)
Translates to: GHTGLLWGALTATGSHRESSAWF*LKFPHR
Trigger: TCTGTGTGGAAACTTCAACCAGAACCAGGCTGATGA...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCGTAGTTGTAGCACATTaGGAAAGTGCCTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSVVVAH*ESASLV
Trigger: GACCAGGGAGGCACTTTCCCAATGTGCTACAACTAC...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACAGGTTTGAGTCTCTCTaGGTGTGCCTGTGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNRFESL*VCLWLE
Trigger: CTCTAGCCACAGGCACACCCAGAGAGACTCAAACCT...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGAGTGACCTTGAGAGGTaGACCTGGCAGTCACCACTG +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLSDLER*TWQSPL
Trigger: CAGTGGTGACTGCCAGGTCCACCTCTCAAGGTCACT...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCACCTCCATGGAGTACTTaGATATTCCAGAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPPPWST*IFQSRN
Trigger: GTTCCTGCTCTGGAATATCCAAGTACTCCATGGAGG...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACTATCTGTGCAGTTGCTaGCAGCTGAGGGTAGGACAT +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNYLCSC*QLRVGH
Trigger: ATGTCCTACCCTCAGCTGTCAGCAACTGCACAGATA...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTGATCGACCAGCACAGTaGAGCTACTATCTGCACATT +
Preference number: 4 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPDRPAQ*SYYLHI
Trigger: AATGTGCAGATAGTAGCTTCACTGTGCTGGTCGATC...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACAGGGGACATTCTCAGTaGCAATTCGGAAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNRGHSQ*QFGRSH
Trigger: ATGGGACCTTCCGAATTGTCACTGAGAATGTCCCCT...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCTGGCACTGTTTGCCTTaGGCTGTAACTTTTATCCAC +
Preference number: 4 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPWHCLP*AVTFIH
Trigger: GTGGATAAAAGTTACAGCTCAAGGCAAACAGTGCCA...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACAGTTGTAGCACATCTTaGAAGTGCCTCCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNSCSTS*KCLPGP
Trigger: AGGACCAGGGAGGCACTTTCAAGATGTGCTACAACT...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGATAGAACTCAGGGTCTaGGTGGCAGTAGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLIELRV*VAVVAD
Trigger: ATCAGCAACTACTGCCACTCAGACCCTGAGTTCTAT...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAATCTTGGGTGTTGTATaGATTGAGGAGACGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPILGVV*IEETLL
Trigger: AAGGAGCGTCTCCTCAATTCATACAACACCCAAGAT...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGTATAGGTGTGCTGGATaGCTGTACCATCAGGACACT +
Preference number: 4 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLYRCAG*LYHQDT
Trigger: AGTGTCCTGATGGTACAGTCATCCAGCACACCTATA...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGAGAAGCAGCCATCCATaGAGTGGTCCTCGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLRSSHP*SGPRRV
Trigger: AACTCTGCGAGGACCACTGCATGGATGGCTGCTTCT...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGGAGTCTCTCTGGGTGTaGCTGTGGCTAGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLESLWV*LWLEKK
Trigger: CTTCTTCTCTAGCCACAGGCACACCCAGAGAGACTC...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGCTGTCCATGAACTTGTaGTTGGTTTACCTGAATGTG +
Preference number: 4 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSELSMNL*LVYLNV
Trigger: CACATTCAGGTAAACCAAGCACAAGTTCATGGACAG...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGATGGAGGAGTATGACTTaGTTATCTGACTACCACTTG +
Preference number: 4 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRWRSMT*LSDYHL
Trigger: CAAGTGGTAGTCAGATAAGCAAGTCATACTCCTCCA...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAGTGAAGTCATCAGCCTaGTTCTGGTTGAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPVKSSA*FWLKFP
Trigger: TGGAAACTTCAACCAGAACCAGGCTGATGACTTCAC...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGGAATCTGATCTTGTATaGAGGGTCTCCGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLESDLV*RVSAWP
Trigger: GGGCCAAGCGGAGACCCTCCATACAAGATCAGATTC...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGTCAGGGAGGTGGAGATaGTTGTCATGCTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQSGRWR*LSCWTR
Trigger: CCTTGTCCAGCATGACAACCATCTCCACCTCCCTGA...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCCTGAGGAGAGACCAGTaGTTAGCAAGGATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSLRRDQ*LARMRF
Trigger: AAACCTCATCCTTGCTAACCACTGGTCTCTCCTCAG...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCCTGGTGACTAGTGTTTaGGGGTTCTTGGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSLVTSV*GFLVVI
Trigger: AATGACAACCAAGAACCCTCAAACACTAGTCACCAG...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGGGAGGTGGAGGAGTATaGCTTGCTTATCTGACTACC +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLGGGGV*LAYLTT
Trigger: GGTAGTCAGATAAGCAAGTCATACTCCTCCACCTCC...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTTTCTCCATTGGTCCTaGTATTCTCATATGTCTCTA +
Preference number: 4 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQFLHWS*YSHMSL
Trigger: TAGAGACATATGAGAATATCAGGACCAATGGAGAAA...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGTCACATACACAGGCCTaGCAGTTGCTGATCCAGTGT +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQSHTQA*QLLIQC
Trigger: ACACTGGATCAGCAACTGTCAGGCCTGTGTATGTGA...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACGGCCAACCTTATCAATaGTCACTGCAGGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNGQPYQ*SLQGSS
Trigger: AGAACTACCCTGCAGTGAGCATTGATAAGGTTGGCC...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCCCCGTTTCTAGGTTaGAGCTTACTACTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQAPFLG*SLLLGQ
Trigger: TTGGCCAAGTAGTAAGCTGCAACCTAGAAACGGGGC...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCATTGTGGATGAGGATATaGAGTCACTATACACTCTCT +
Preference number: 4 (lower is better)
Translates to: RARSSPGTLLKWILIAPPLWMRI*SHYTLS
Trigger: AGAGAGTGTATAGTGACTCCATATCCTCATCCACAA...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTTCATAGGTGTTCTTaGAGTTGGGGCAGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLLHRCS*SWGRRL
Trigger: AAGCCTCCTGCCCCAACTCCAAGAACACCTATGAAG...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGTTACAAACCACCTCCTaGCCCAGCTTCTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQLQTTS*PSFWKD
Trigger: ATCCTTCCAGAAGCTGGGCCAGGAGGTGGTTTGTAA...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGCAAAGGTCCCGATTaGTTGATATTTTTGCATATC +
Preference number: 4 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSCKGPD*LIFLHI
Trigger: GATATGCAAAAATATCAACCAATCGGGACCTTTGCA...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGTCTTTGGCCATGTCCTaGCAGTCAGAAGCTATGGTG +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLSLAMS*QSEAMV
Trigger: CACCATAGCTTCTGACTGCCAGGACATGGCCAAAGA...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGTCACTATACACTCTCTaGCTGTCTCCGGTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLSLYTL*LSPVSS
Trigger: AGAACTCACCGGAGACAGTCAGAGAGTGTATAGTGA...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCTGCTGTTTCTACAGATaGGTCCAAAGTCCACATTAC +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSCCFYR*VQSPHY
Trigger: GTAATGTGGACTTTGGACTCATCTGTAGAAACAGCA...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACTTTTCACATAGCCACTaGTCTTCTCCATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNFSHSH*SSPSGD
Trigger: GTCTCCTGATGGAGAAGAGCAGTGGCTATGTGAAAA...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGTCTGGAAGGATATGTTaGGAAAGAGGACGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQSGRIC*ERGRLH
Trigger: GTGAAGCCGTCCTCTTTCCCAACATATCCTTCCAGA...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCGATCGTATCCACATTTaGTCCCATATAATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSDRIHI*SHIIRL
Trigger: GAGCCTGATTATATGGGACCAAATGTGGATACGATC...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCCTTACACTCTACTTTTaGCTCTTGGTCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSLTLYF*LLVTIR
Trigger: TCTGATGGTGACCAAGAGCCAAAAGTAGAGTGTAAG...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
3UTR CAA 72 bp TCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTaGTTTTATGTGACAGAGGACACACAGGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SAFVSMRCLTQG*FYVTEDTQACC
Trigger: ACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp ACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTTGATGCTGGTCTTAGTACCATCAGGACACTaGATAGTTACAGCTACATCA +
Preference number: 4 (lower is better)
Translates to: TLLKWILIAPPPSLMLVLVPSGH*IVTATS
Trigger: TGATGTAGCTGTAACTATGCAGTGTCCTGATGGTAC...TAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACTCTTTTTCTCTTCTCTaGTCCAGGACTGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNSFSLL*SRTVIL
Trigger: CAGAATCACAGTCCTGGACCAGAGAAGAGAAAAAGA...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCTCTCAGGAAAGATCTTaGGTGTTGTATGAATTGAGG +
Preference number: 4 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSSQERS*VLYELR
Trigger: CCTCAATTCATACAACACCCAAGATCTTTCCTGAGA...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CCA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTTTGAAATCATCTTTCTaGTCTTCATTTTTGCAGACC +
Preference number: 4 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLLKSSF*SSFLQT
Trigger: GGTCTGCAAAAATGAAGACCAGAAAGATGATTTCAA...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGTATGATGAAGAAGGATaGTGGCTTGAAGATGGTAAT +
Preference number: 4 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLYDEEG*WLEDGN
Trigger: ATTACCATCTTCAAGCCATCATCCTTCTTCATCATA...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR TCA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACTCCATTAATGCTAGATaGAGGGTAGTCTACATTGAT +
Preference number: 4 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNSINAR*RVVYID
Trigger: ATCAATGTAGACTACCCTTCATCTAGCATTAATGGA...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR GCA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGATTTGGTTGTCACTCTaGTTGCTGTTTCTACAGATG +
Preference number: 4 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQIWLSL*LLFLQM
Trigger: CATCTGTAGAAACAGCAAGCAGAGTGACAACCAAAT...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp GGTAGCCCCCTGCGTGGGCACACTGGCGGGAATATTCGGCAAAAGTaGCACATGGGCAGGTGGGACAGCGGCACAGGTCCTGGACACAGG +
Preference number: 5 (lower is better)
Translates to: GSPLRGHTGGNIRQK*HMGRWDSGTGPGHR
Trigger: CCTGTGTCCAGGACCTGTGCCGCTGTCCCACCTGCCCATGTGCCACTTTTGCCGAATATTCCCGCCAGTGTGCCCACGCAGGGGGCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp GGACAGGGTCTCAGTGACTGCTCTGGTCGTGGAGGCAGTGGTGACTaGGTGTGTGGTCGTGCCTCCATGAGGAGGACTGGAGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GQGLSDCSGRGGSGD*VCGRASMRRTGGPR
Trigger: CCTGGGCCCTCCAGTCCTCCTCATGGAGGCACGACCACACACCCAGTCACCACTGCCTCCACGACCAGAGCAGTCACTGAGACCCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp GGACAGGGTCTCAGTGACTGCTCTGGTCGTAGAGGCAGTGGTGACTaGGTGTGTGGTCGTGCCTCCATGAGGAGGACTGGAGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GQGLSDCSGRRGSGD*VCGRASMRRTGGPR
Trigger: CCTGGGCCCTCCAGTCCTCCTCATGGAGGCACGACCACACACCCAGTCACCACTGCCTCTACGACCAGAGCAGTCACTGAGACCCTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GGAGGTCTCAGGGCTGCTGGCTGGCTGTGTGACTGTGTTGGGCCTTaGAGTGGACCCAGTCTGTGTGCCTGGTCCTGCTGTGGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: GGLRAAGWLCDCVGP*SGPSLCAWSCCGAD
Trigger: GTCAGCTCCACAGCAGGACCAGGCACACAGACTGGGTCCACTTCAAGGCCCAACACAGTCACACAGCCAGCCAGCAGCCCTGAGACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp CTGGTCGTAGAGGCAGCGGTGACTGGGTGTGTGGTCGTGCCTCCATaGGGAGGACTGGAGGGCTCAGAAGTGGTCAGGGAGGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: LVVEAAVTGCVVVPP*GGLEGSEVVREVEM
Trigger: CATCTCCACCTCCCTGACCACTTCTGAGCCCTCCAGTCCTCCTCATGGAGGCACGACCACACACCCAGTCACCGCTGCCTCTACGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp TCATTGGGCTGTACCGCGTGGCCCTCTGGTGTGAGGCAGGCATTTTaGAGGCACTCCCCGCAGCACTGCTCTGGCACCAGCGTGTACTTG +
Preference number: 5 (lower is better)
Translates to: SLGCTAWPSGVRQAF*RHSPQHCSGTSVYL
Trigger: CAAGTACACGCTGGTGCCAGAGCAGTGCTGCGGGGAGTGCCTGCAAAATGCCTGCCTCACACCAGAGGGCCACGCGGTACAGCCCAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp CCCTGCGTGGGCACACTGGCGGGAATATTCGGCAAAAGTGGCACATaGGCAGGTGGGACAGCGGCACAGGTCCTGGACACAGGCATCCAA +
Preference number: 5 (lower is better)
Translates to: PCVGTLAGIFGKSGT*AGGTAAQVLDTGIQ
Trigger: TTGGATGCCTGTGTCCAGGACCTGTGCCGCTGTCCCACCTGCCCATGTGCCACTTTTGCCGAATATTCCCGCCAGTGTGCCCACGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCGCAATGCAGGGGTCCTaGGGAACTGGGGCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPAMQGS*GTGASG
Trigger: CCCAGACGCCCCAGTTCCCAAGGACCCCTGCATTGC...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGTCGGGGCAGCATGGATaGTCAGCACTGGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: TANRLLRARSSPGTLLKWSGQHG*SALGQV
Trigger: GACCTGGCCCAGTGCTGACAATCCATGCTGCCCCGA...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp TCAGGGCAGAAGCAGCCCTCTGCCAGCATCCCAGTTGTACTATCCTaGGTCCTCGAGTTGCAGGATGCTGGATGCAGGGGTCCACAGGGC +
Preference number: 5 (lower is better)
Translates to: SGQKQPSASIPVVLS*VLELQDAGCRGPQG
Trigger: GCCCTGTGGACCCCTGCATCCAGCATCCTGCAACTCGAGGACCCAGGATAGTACAACTGGGATGCTGGCAGAGGGCTGCTTCTGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp AGGACTGTTCACCCAGGTTTCATTGGGCTGTACCGCGTGGCCCTCTaGTGTGAGGCAGGCATTTTGCAGGCACTCCCCGCAGCACTGCTC +
Preference number: 5 (lower is better)
Translates to: RTVHPGFIGLYRVAL*CEAGILQALPAALL
Trigger: GAGCAGTGCTGCGGGGAGTGCCTGCAAAATGCCTGCCTCACACCAGAGGGCCACGCGGTACAGCCCAATGAAACCTGGGTGAACAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGACCCATGCAGGGCTTGTaGGTGCATTCCCACCGGCGG +
Preference number: 5 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRPMQGL*VHSHRR
Trigger: CCGCCGGTGGGAATGCACCAACAAGCCCTGCATGGG...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTGGATGCTTGGGTGCTaGGCCCTGAAGGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPWMLGC*ALKGWQ
Trigger: CTGCCAGCCCTTCAGGGCCAAGCACCCAAGCATCCA...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp CGTGTGTACAGTGGCACTGCTCCAGGGGCAGGCATCCCAAGTGTCTaGCATCGTCCAGCACAGTTCCTGGGGGACAGAAGCAGCCATCCA +
Preference number: 5 (lower is better)
Translates to: RVYSGTAPGAGIPSV*HRPAQFLGDRSSHP
Trigger: TGGATGGCTGCTTCTGTCCCCCAGGAACTGTGCTGGACGATGTCAGACACTTGGGATGCCTGCCCCTGGAGCAGTGCCACTGTACACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp AAGAAGGCATCTGGAGGGATGAGCCTGTGGCACTCTGCGAAGACCTaGCTCAGCATCAGCTCACAGAGAGGTGCAGAGGGGCATGGGGTG +
Preference number: 5 (lower is better)
Translates to: KKASGGMSLWHSAKT*LSISSQRGAEGHGV
Trigger: CACCCCATGCCCCTCTGCACCTCTCTGTGAGCTGATGCTGAGCCAGGTCTTCGCAGAGTGCCACAGGCTCATCCCTCCAGATGCCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp GGATGCTGGATGCAGGGGTCCACAGGGCCTGTACTCCTTAGTGGGTaGACAGGAGAGGTCACACAAGCCTCCAGTGGCATTGCGCCAGTT +
Preference number: 5 (lower is better)
Translates to: GCWMQGSTGPVLLSG*TGEVTQASSGIAPV
Trigger: AACTGGCGCAATGCCACTGGAGGCTTGTGTGACCTCTCCTGTCCACCCACTAAGGAGTACAGGCCCTGTGGACCCCTGCATCCAGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp GGGTCTGGACCAGCTCATATCCTGGCTCACACGTGGGCAGGCTCTTaGGGCAGGTGGTTGAATTGCAAACACACAGTGTCTCGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GSGPAHILAHTWAGS*GRWLNCKHTVSRGS
Trigger: GCTGCCCCGAGACACTGTGTGTTTGCAATTCAACCACCTGCCCCAAGAGCCTGCCCACGTGTGAGCCAGGATATGAGCTGGTCCAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp TTGTCCACAGGACTGTTCACCCAGGTTTCATTGGGCTGTACCGCGTaGCCCTCTGGTGTGAGGCAGGCATTTTGCAGGCACTCCCCGCAG +
Preference number: 5 (lower is better)
Translates to: LSTGLFTQVSLGCTA*PSGVRQAFCRHSPQ
Trigger: CTGCGGGGAGTGCCTGCAAAATGCCTGCCTCACACCAGAGGGCCACGCGGTACAGCCCAATGAAACCTGGGTGAACAGTCCTGTGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGCACCCATGCAGGGCTaGTTGGTGCATTCCCACCGG +
Preference number: 5 (lower is better)
Translates to: QQAPQGQILTWNPPQVDLAPMQG*LVHSHR
Trigger: CCGGTGGGAATGCACCAACAAGCCCTGCATGGGTGC...AAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCATGGAGGGTCTCCGCTaGGCCCTTGCTCTACCACCT +
Preference number: 5 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPMEGLR*ALALPP
Trigger: AGGTGGTAGAGCAAGGGCCAAGCGGAGACCCTCCAT...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCAGGCAGGGAGTAACCTaGAGAGGTGGACCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: EAKTANRLLRARSSPGTLRQGVT*RGGPGS
Trigger: ACTGCCAGGTCCACCTCTCAAGGTTACTCCCTGCCT...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTGGCTGTGTGACTGTGTaGGGCCTTGAAGTGGACCCA +
Preference number: 5 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGGCVTV*GLEVDP
Trigger: TGGGTCCACTTCAAGGCCCAACACAGTCACACAGCC...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTGACCCCCTGGGAAGGTaGTACCAACCCCATAGATGG +
Preference number: 5 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGDPLGR*YQPHRW
Trigger: CCATCTATGGGGTTGGTACAACCTTCCCAGGGGGTC...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp GGCCATCCCCGTAGGCCACACAGGCACCCATGCAGGGCTTGTTGGTaGATTCCCACCGGCGGTTCTTACAGGTGCAGTTATTGCAGTCTA +
Preference number: 5 (lower is better)
Translates to: GHPRRPHRHPCRACW*IPTGGSYRCSYCSL
Trigger: TAGACTGCAATAACTGCACCTGTAAGAACCGCCGGTGGGAATGCACCAACAAGCCCTGCATGGGTGCCTGTGTGGCCTACGGGGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp CAGGCACCAGCCATTCTTTGGCCATGTCCTGGCAGTCAGAAGCTATaGTGCCATCAGGCCGGCGGCAGTCGTCTATCTGGCTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: QAPAILWPCPGSQKL*CHQAGGSRLSGCLC
Trigger: GCACAAACAGCCAGATAGACGACTGCCGCCGGCCTGATGGCACCATAGCTTCTGACTGCCAGGACATGGCCAAAGAATGGCTGGTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp GAGCTAAGCAGCTGCTGCTACTGTTCCCAGGCACCAGCCATTCTTTaGCCATGTCCTGGCAGTCAGAAGCTATGGTGCCATCAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: ELSSCCYCSQAPAIL*PCPGSQKLWCHQAG
Trigger: GCCGGCCTGATGGCACCATAGCTTCTGACTGCCAGGACATGGCCAAAGAATGGCTGGTGCCTGGGAACAGTAGCAGCAGCTGCTTAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGGTGGAGGTGGTTGGCTaGGCAGTGCTCGGAACATTG +
Preference number: 5 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQVEVVG*AVLGTL
Trigger: CAATGTTCCGAGCACTGCCAAGCCAACCACCTCCAC...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCCCTTGTCCACTGACATaGGGGTTGGCAGGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPPCPLT*GLAGGG
Trigger: TCCACCACCTGCCAACCCCAATGTCAGTGGACAAGG...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGGTGTTGGGCAAAGGCTaGGAGGACAGGGTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSEVLGKG*EDRVWG
Trigger: TCCCCAGACCCTGTCCTCCAAGCCTTTGCCCAACAC...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp CTTGGAGGACAGTGTCTGGGGAGTGGAGGTGGCAGTTTCTGTCGTTaGGACCGATCCTTCAGGGGTGGTAGATCCCTGGCAGTGGCTAAC +
Preference number: 5 (lower is better)
Translates to: LGGQCLGSGGGSFCR*DRSFRGGRSLAVAN
Trigger: GTTAGCCACTGCCAGGGATCTACCACCCCTGAAGGATCGGTCTCAACGACAGAAACTGCCACCTCCACTCCCCAGACACTGTCCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GTCACCACTGATGGGCTGCCAGAGGATTCTAGACTCTTGGGATGCTaGGTGCTCACTGAGGTGACTGTGAGAGGAGTGGTGGGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: VTTDGLPEDSRLLGC*VLTEVTVRGVVGGD
Trigger: GTCCCCACCCACCACTCCTCTCACAGTCACCTCAGTGAGCACTCAGCATCCCAAGAGTCTAGAATCCTCTGGCAGCCCATCAGTGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GGCTCACACTGTACCGACACAGAGCCGGGCTCACATACACAGGCCTaGCAGTTGCTGATCCAGTGTTCTCCAGGAAACTTGGGTAGCCCG +
Preference number: 5 (lower is better)
Translates to: GSHCTDTEPGSHTQA*QLLIQCSPGNLGSP
Trigger: CGGGCTACCCAAGTTTCCTGGAGAACACTGGATCAGCAACTGTCAGGCCTGTGTATGTGAGCCCGGCTCTGTGTCGGTACAGTGTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp ATCCTGGCTCACACGTGGGCAGGCTCTTGGGGCAGGTGGTTGAATTaGAAACACACAGTGTCTCGGGGCAGCATGGATTGTCAGCACTGG +
Preference number: 5 (lower is better)
Translates to: ILAHTWAGSWGRWLN*KHTVSRGSMDCQHW
Trigger: CCAGTGCTGACAATCCATGCTGCCCCGAGACACTGTGTGTTTGCAATTCAACCACCTGCCCCAAGAGCCTGCCCACGTGTGAGCCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCAGACCTACAGCTGGTGTaGAAGGACTCTCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: RARSSPGTLLKWILIAPPDLQLV*KDSPGA
Trigger: TGCCCCTGGAGAGTCCTTCAACACCAGCTGTAGGTC...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTTGATGCTGGTCTTAGATGTGGGACCCGCCTaGCACAGAGCAGGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: TLLKWILIAPPPSLMLVLDVGPA*HRAGAR
Trigger: CCTGGCACCTGCTCTGTGCAAGGCGGGTCCCACATC...TAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCACCACACATCTGGCCTaGGTAGGAGCGGTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSTTHLA*VGAVQP
Trigger: CGGCTGGACCGCTCCTACCAAGGCCAGATGTGTGGT...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGCCACTGACATTGGGGTaGGCAGGTGGTGGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSEPLTLG*AGGGEG
Trigger: ACCTTCTCCACCACCTGCCAACCCCAATGTCAGTGG...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCATGGCCAGGTTGGGGTTaGTCACTGTCCAGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: RARSSPGTLLKWILIAPPWPGWG*SLSSQS
Trigger: AGACTGGCTGGACAGTGACAAACCCCAACCTGGCCA...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCAGGCAGGGAGTGACCTaGAGAGGTGGACCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPRQGVT*RGGPGS
Trigger: ACTGCCAGGTCCACCTCTCAAGGTCACTCCCTGCCT...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTAAGGGGTCCCTGAGGTaGAGGATGGGGCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPKGSLR*RMGPQW
Trigger: CCACTGTGGCCCCATCCTCAACCTCAGGGACCCCTT...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCTGTGAGGCAGGCATTTaGCAGGCACTCCCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPCEAGI*QALPAA
Trigger: TGCTGCGGGGAGTGCCTGCAAAATGCCTGCCTCACA...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp TGGGACAGCGGCACAGGTCCTGGACACAGGCATCCAAGTACATGCTaGCATCTACCAGAGCGGTGCACTTGTCAAAGGCAGGACCAAGCA +
Preference number: 5 (lower is better)
Translates to: WDSGTGPGHRHPSTC*HLPERCTCQRQDQA
Trigger: TGCTTGGTCCTGCCTTTGACAAGTGCACCGCTCTGGTAGATGTCAGCATGTACTTGGATGCCTGTGTCCAGGACCTGTGCCGCTGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GAGCTGGCTGAGGAAACTGTAGGGAGCTCTGAGGTGGTCTTGGTATaGGGTCTTGAGGACAGGGTCTCAGTGACTGCTCTGGTCGTGGAG +
Preference number: 5 (lower is better)
Translates to: ELAEETVGSSEVVLV*GLEDRVSVTALVVE
Trigger: CTCCACGACCAGAGCAGTCACTGAGACCCTGTCCTCAAGACCTCATACCAAGACCACCTCAGAGCTCCCTACAGTTTCCTCAGCCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GTCACCACTGATGGGCTGCCAGAGGATTCTAGACTCTTGGGATGCTaGGTGCTCACTGAGGTGACTGTGAGAGGAGTGGTGGGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: VTTDGLPEDSRLLGC*VLTEVTVRGVVGGD
Trigger: ATCCCCACCCACCACTCCTCTCACAGTCACCTCAGTGAGCACTCAGCATCCCAAGAGTCTAGAATCCTCTGGCAGCCCATCAGTGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GTTGGGAAGAGGCATAGAACTCAGGGTCTGAGTGGCAGTAGTTGCTaGTCCTGTCATTGGGGCCGACCCTGGAGTGGTGGTAGATCCCTG +
Preference number: 5 (lower is better)
Translates to: VGKRHRTQGLSGSSC*SCHWGRPWSGGRSL
Trigger: CAGGGATCTACCACCACTCCAGGGTCGGCCCCAATGACAGGATCAGCAACTACTGCCACTCAGACCCTGAGTTCTATGCCTCTTCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GCACAGGTGACATTGTCCACAGGCTCCGGCTCAAGGAGAATGATTTaGTTGTTGCCCTGGCACCTGGCCACTGTGCAGTTCTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: AQVTLSTGSGSRRMI*LLPWHLATVQFSRV
Trigger: GACCCTGGAGAACTGCACAGTGGCCAGGTGCCAGGGCAACAATCAAATCATTCTCCTTGAGCCGGAGCCTGTGGACAATGTCACCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp TCAGGACACTGCATAGTTACAGCTACATCATGGACCTTGCTCTCCTaGCAGCAGGTGCACTGGCGTTCCATGGCCTGGGCCTCCATGGAG +
Preference number: 5 (lower is better)
Translates to: SGHCIVTATSWTLLS*QQVHWRSMAWASME
Trigger: CTCCATGGAGGCCCAGGCCATGGAACGCCAGTGCACCTGCTGTCAGGAGAGCAAGGTCCATGATGTAGCTGTAACTATGCAGTGTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp AGGAGGTGCCATCGAAGGTCAGGTAGTGTGAGTGCCCCCATCCACTaGAGAAGCATTCACACTCGTAGTGGAAGTGGCAAGGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: RRCHRRSGSVSAPIH*RSIHTRSGSGKAPG
Trigger: ACCAGGAGCCTTGCCACTTCCACTACGAGTGTGAATGCTTCTGCAGTGGATGGGGGCACTCACACTACCTGACCTTCGATGGCACCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp GGCATTGCGCCAGTTGGTACATACACCTTGGGCCCGGCAGAGTGCTaGATAGGCCTCCAGGCTCTGACAGAGCATGTCAGTAATATTGGC +
Preference number: 5 (lower is better)
Translates to: GIAPVGTYTLGPAEC*IGLQALTEHVSNIG
Trigger: GCCAATATTACTGACATGCTCTGTCAGAGCCTGGAGGCCTATGCAGCACTCTGCCGGGCCCAAGGTGTATGTACCAACTGGCGCAATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp CACAGACCCTGCCCTTATAATGCTGCTGCAGCCGGACAAACACACTaGTCTTCCTGTCCCAGGACACGACTATCCCGCTGCGGATCTCAA +
Preference number: 5 (lower is better)
Translates to: HRPCPYNAAAAGQTH*SSCPRTRLSRCGSQ
Trigger: TTGAGATCCGCAGCGGGATAGTCGTGTCCTGGGACAGGAAGACCAGTGTGTTTGTCCGGCTGCAGCAGCATTATAAGGGCAGGGTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp CATGAGGAGGACTGGAGGGCCCAGGAGTGGTCAGGGAGGTGGAGATaGTTGTCATGCTGGACAAGGAAGCCTTTGAGGTTGTTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: HEEDWRAQEWSGRWR*LSCWTRKPLRLLLR
Trigger: TCTCAGCAACAACCTCAAAGGCTTCCTTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTCCTGGGCCCTCCAGTCCTCCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp CATCATGGACCTTGCTCTCCTGACAGCAGGTGCACTGGCGTTCCATaGCCTGGGCCTCCATGGAGTACTTGGATATTCCAGAGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: HHGPCSPDSRCTGVP*PGPPWSTWIFQSRN
Trigger: GTTCCTGCTCTGGAATATCCAAGTACTCCATGGAGGCCCAGGCCATGGAACGCCAGTGCACCTGCTGTCAGGAGAGCAAGGTCCATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCACTGAGCAGCACGCCTTaGGCAGCACAGGCAAACACA +
Preference number: 5 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPLSSTP*AAQANT
Trigger: TGTGTTTGCCTGTGCTGCCAAAGGCGTGCTGCTCAG...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ATGAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTTCATCTGGTCCTCATaGAAGAAGGGCTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: MRPKQPTGSSGPDPHLEPFIWSS*KKGWLA
Trigger: AGCCAGCCAGCCCTTCTTCAATGAGGACCAGATGAA...GGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCGTGTTGGGCAGAGGCTaGGAGGACAGTGTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSVLGRG*EDSVWG
Trigger: TCCCCAGACACTGTCCTCCAAGCCTCTGCCCAACAC...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAGGGAGGTGGAGATGGTaGTCATGCTGGACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRGRWRW*SCWTRK
Trigger: CTTCCTTGTCCAGCATGACAACCATCTCCACCTCCC...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGTGGACAGAGAAGCCTTaGAGGTTGTTGCTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: TANRLLRARSSPGTLLKWWTEKP*RLLLRV
Trigger: CACTCTCAGCAACAACCTCAAAGGCTTCTCTGTCCA...CCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTGTCTGTCCAGGTGCATaGAGATTTACAGCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGVCPGA*RFTACG
Trigger: TCCACAGGCTGTAAATCTCAATGCACCTGGACAGAC...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCACGGTCAGACTAGTGTaGGGAAGAGGCATAGAACTC +
Preference number: 5 (lower is better)
Translates to: EAKTANRLLRARSSPGTLTVRLV*GRGIEL
Trigger: GAGTTCTATGCCTCTTCCCAACACTAGTCTGACCGT...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCTCAGTCCACTTACACTaGGGTTGGCAGAGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: EAKTANRLLRARSSPGTLSVHLH*GWQSVV
Trigger: CACAACACTCTGCCAACCCAAGTGTAAGTGGACTGA...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCCACGTGGGCAGGCTCTaGGGGCAGGTGGTTGAATTG +
Preference number: 5 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSHVGRL*GQVVEL
Trigger: CAATTCAACCACCTGCCCCAAGAGCCTGCCCACGTG...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGTGGTATGCAGTGCAGTaGTCCACAGGACTGTTCACC +
Preference number: 5 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQWYAVQ*STGLFT
Trigger: GGTGAACAGTCCTGTGGACAACTGCACTGCATACCA...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGATCGCAGAAGGTGATGTaGACCTCTGTCTCACAGCCC +
Preference number: 5 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRSQKVM*TSVSQP
Trigger: GGGCTGTGAGACAGAGGTCAACATCACCTTCTGCGA...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGATCCCAGAGCCCCTCCAGCAGGCAGCCACCTTGCCTGATACAGATCCCTGGTGCCTCCATGGAGTACTaGGATATTCCAGAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: RSQSPSSRQPPCLIQIPGASMEY*DIPEQE
Trigger: TTCCTGCTCTGGAATATCCAAGTACTCCATGGAGGC...ACCAGGGATCTGTATCAGGCAAGGTGGCTGCCTGCTGGAGGGGCTCTGGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp CAGTGTGTGGCAGCTTTTGAGGCATTCAGCCCCGTGGTGACCCACTaGGGCATTGTTACAATCCAGGTAGACCATAGGCGCCTGACACTC +
Preference number: 5 (lower is better)
Translates to: QCVAAFEAFSPVVTH*GIVTIQVDHRRLTL
Trigger: GAGTGTCAGGCGCCTATGGTCTACCTGGATTGTAACAATGCCTCAGTGGGTCACCACGGGGCTGAATGCCTCAAAAGCTGCCACACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GTCACGGTCAGACTAGTGTTGGGAAGAGGCATAGAACTCAGGGTCTaGGTGGCAGTAGTTGCTGATCCTGTCATTGGGGCCGACCCTGGA +
Preference number: 5 (lower is better)
Translates to: VTVRLVLGRGIELRV*VAVVADPVIGADPG
Trigger: TCCAGGGTCGGCCCCAATGACAGGATCAGCAACTACTGCCACTCAGACCCTGAGTTCTATGCCTCTTCCCAACACTAGTCTGACCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GTGTTGTATGAATTGAGGAGACGCTCCTTGGGCTGCTGGTTTCCGTaGTGCTTGTTGCTGCTGTGGTGGAGGCCGAGTGAGGACTGGTCA +
Preference number: 5 (lower is better)
Translates to: VLYELRRRSLGCWFP*CLLLLWWRPSEDWS
Trigger: TGACCAGTCCTCACTCGGCCTCCACCACAGCAGCAACAAGCATCACGGAAACCAGCAGCCCAAGGAGCGTCTCCTCAATTCATACAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GTCTGCGTCAAACCACTCTGTCCATTTGCAGCGAGGTGTACAGCCTaGGTCAGGAAGTGTAGACCATGTGGATGCTTGGGTGCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: VCVKPLCPFAARCTA*VRKCRPCGCLGAWP
Trigger: GGGCCAAGCACCCAAGCATCCACATGGTCTACACTTCCTGACTCAGGCTGTACACCTCGCTGCAAATGGACAGAGTGGTTTGACGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp GAGGGTAGGACATCCTGGCACTGCTCTGTAGGACCATCCAGCTTCTaGAAGTTTCCAAACTGCACAGGGGTCAGCCTAGTGTTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: EGRTSWHCSVGPSSF*KFPNCTGVSLVLWV
Trigger: CACCCACAACACTAGGCTGACCCCTGTGCAGTTTGGAAACTTGCAGAAGCTGGATGGTCCTACAGAGCAGTGCCAGGATGTCCTACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp GACTGGAGGGCCCAGGAGTGGTCAGGGAGGTGGAGATGGTTGTCATaGTGGACAAGGAAGCCTTTGAGGTTGTTGCTGAGAGTGAATTGG +
Preference number: 5 (lower is better)
Translates to: DWRAQEWSGRWRWLS*WTRKPLRLLLRVNW
Trigger: CCAATTCACTCTCAGCAACAACCTCAAAGGCTTCCTTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTCCTGGGCCCTCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp GACTGGAGGGCCCAGGAGTGGTCAGGGAGGTGGAGATGGTTGTCATaGTGGACAGAGAAGCCTTTGAGGTTGTTGCTGAGAGTGAATTGG +
Preference number: 5 (lower is better)
Translates to: DWRAQEWSGRWRWLS*WTEKPLRLLLRVNW
Trigger: CCAATTCACTCTCAGCAACAACCTCAAAGGCTTCTCTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTCCTGGGCCCTCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp GATTGTCAGCACTGGGCCAGGTCACAGTCACAAAGCCAGCTTCTGTaGACTGTGGGGGTTTATCCTGGCTCTCACACTTCACTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: DCQHWARSQSQSQLL*TVGVYPGSHTSLAH
Trigger: GTGAGCCAGTGAAGTGTGAGAGCCAGGATAAACCCCCACAGTGCACAGAAGCTGGCTTTGTGACTGTGACCTGGCCCAGTGCTGACAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp CCAGGGGCCTGTCTGGCTCCTTCTCTGAACGGCACTCGATGTCCTTaGGCTGATCGCAGAAGATGTAGCCAACCTCACGAAATACTGCAT +
Preference number: 5 (lower is better)
Translates to: PGACLAPSLNGTRCP*ADRRRCSQPHEILH
Trigger: ATGCAGTATTTCGTGAGGTTGGCTACATCTTCTGCGATCAGCCCAAGGACATCGAGTGCCGTTCAGAGAAGGAGCCAGACAGGCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp GGACACTCTGACACACAGATGTCCATGCGTGAGTTGAAGAGGAGCTaGTTCTCAGGGCAGAAGCAGCCCTCTGCCAGCATCCCAGTTGTA +
Preference number: 5 (lower is better)
Translates to: GHSDTQMSMRELKRS*FSGQKQPSASIPVV
Trigger: TACAACTGGGATGCTGGCAGAGGGCTGCTTCTGCCCTGAGAACCAGCTCCTCTTCAACTCACGCATGGACATCTGTGTGTCAGAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGCTTTGTCCACTGACATaGGGGTTGGCAGGTGGTAGA +
Preference number: 5 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSELCPLT*GLAGGR
Trigger: TCTACCACCTGCCAACCCCAATGTCAGTGGACAAAG...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCATGGTGGACAGAGATGTaGAGGAGACAGTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPWWTEM*RRQCQL
Trigger: CAGCTGGCACTGTCTCCTCAACATCTCTGTCCACCA...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGGCAGATGGCATAGAATaGGCAGCCAGCTCCATCAGT +
Preference number: 5 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSEADGIE*AASSIS
Trigger: ACTGATGGAGCTGGCTGCCAATTCTATGCCATCTGC...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTTGATGCTGGTCTTAGGCACCAGCGTGTACTaGAAGCCCTGGGGACAAGAG +
Preference number: 5 (lower is better)
Translates to: TLLKWILIAPPPSLMLVLGTSVY*KPWGQE
Trigger: CTCTTGTCCCCAGGGCTTCAAGTACACGCTGGTGCC...TAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp CATGAGGAGGACTGGAGGGCTCAGAAGTGGTCAGGGAGGTGGAGATaGTTGTCATGCTGGACAGAGAAGCCTTTGAGGTTGTTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: HEEDWRAQKWSGRWR*LSCWTEKPLRLLLR
Trigger: TCTCAGCAACAACCTCAAAGGCTTCTCTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTTCTGAGCCCTCCAGTCCTCCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp TGCTATTCTCATGGGTCTGGACCAGCTCATATCCTGGCTCACACGTaGGCAGGCTCTTGGGGCAGGTGGTTGAATTGCAAACACACAGTG +
Preference number: 5 (lower is better)
Translates to: CYSHGSGPAHILAHT*AGSWGRWLNCKHTV
Trigger: CACTGTGTGTTTGCAATTCAACCACCTGCCCCAAGAGCCTGCCCACGTGTGAGCCAGGATATGAGCTGGTCCAGACCCATGAGAATAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GAGGCCAAAACAGCCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCTCTCGGTATTCCATGTaGAAAGGGCATGTCCAATTG +
Preference number: 5 (lower is better)
Translates to: EAKTANRLLRARSSPGTLSRYSM*KGHVQL
Trigger: CAATTGGACATGCCCTTTCAACATGGAATACCGAGA...GAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGGCTGTTTTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGGTGGTCCTCGCAGAGTaGAGAGCGCTGGGGGTTAGA +
Preference number: 5 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLVVLAE*RALGVR
Trigger: TCTAACCCCCAGCGCTCTCAACTCTGCGAGGACCAC...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGCTGTGGGGAGCCTGGGCTCTGTTCACTGTaGAAGCAACTCAGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: TQGLFYVTEDTQACCGEPGLCSL*KQLSPE
Trigger: CTCTGGGCTGAGTTGCTTCAACAGTGAACAGAGCCC...AGGCTCCCCACAGCAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CAGAGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGCTACATCGATCCACTTaGTCCACTGACATTGGGGTT +
Preference number: 5 (lower is better)
Translates to: QRTHRLAVGSLNSHRLSQLHRST*STDIGV
Trigger: AACCCCAATGTCAGTGGACAAAGTGGATCGATGTAG...CTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGATGGACAAGGAAGCCTTaGAGGTTGTTGCTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRWTRKP*RLLLRV
Trigger: CACTCTCAGCAACAACCTCAAAGGCTTCCTTGTCCA...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCGGGAGGTGGAGATGGTaGTCATGCTGGACAGAGAAG +
Preference number: 5 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSGRWRW*SCWTEK
Trigger: CTTCTCTGTCCAGCATGACAACCATCTCCACCTCCC...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CCAACAGGCTCCTCAGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTCACACCAGACCAGAGTaGACATCACACTTCACTTTC +
Preference number: 5 (lower is better)
Translates to: PTGSSGPDPHLEPSSSGSHTRPE*TSHFTF
Trigger: GAAAGTGAAGTGTGATGTCAACTCTGGTCTGGTGTG...AGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCTGAGGAGCCTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp TCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGTGAGATGTCCATGCGTGAGTaGAAGAGGAGCTGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: SLMLVLTVAGGGWSRGSEMSMRE*KRSWFS
Trigger: TGAGAACCAGCTCCTCTTCAACTCACGCATGGACAT...CTCACTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGGGCCAGATCCTCACCTGGAACCCTCCTCAAGTGGATCTTGATTGCCCCACCACTCTACTTTTGGCTCTaGGTCACCATCAGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: RARSSPGTLLKWILIAPPLYFWL*VTIREA
Trigger: TGCCTCTCTGATGGTGACCAAGAGCCAAAAGTAGAG...TGGTGGGGCAATCAAGATCCACTTGAGGAGGGTTCCAGGTGAGGATCTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GTTGTGAGGGCTGAGGAGAGACCAGTGGTTAGCAAGGATGAGGTTTaGGTCTCTCTGGGTGTGCCTGTGGCTAGAGAAGAAGCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: VVRAEERPVVSKDEV*VSLGVPVAREEAVV
Trigger: TACCACAGCTTCTTCTCTAGCCACAGGCACACCCAGAGAGACTCAAACCTCATCCTTGCTAACCACTGGTCTCTCCTCAGCCCTCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp AGGTGCATTGAGATTTACAGCCTGTGGAGGTGGTCCCTGTGGTTGTaGGGGCTGAGGAGAGACCAGTGGTTAGCAAGGATGAGGTTTGAG +
Preference number: 5 (lower is better)
Translates to: RCIEIYSLWRWSLWL*GLRRDQWLARMRFE
Trigger: CTCAAACCTCATCCTTGCTAACCACTGGTCTCTCCTCAGCCCTCACAACCACAGGGACCACCTCCACAGGCTGTAAATCTCAATGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GGGCAAGGATGCTCAGGTTACCATGGCGAGGGTGGATCTCTCTCATaGGCACGGAGGTACAGTTATCCAGGAAAGTATAGGAGGTGCCAT +
Preference number: 5 (lower is better)
Translates to: GQGCSGYHGEGGSLS*ARRYSYPGKYRRCH
Trigger: ATGGCACCTCCTATACTTTCCTGGATAACTGTACCTCCGTGCTCATGAGAGAGATCCACCCTCGCCATGGTAACCTGAGCATCCTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp GATGCTGATTTTCACATAGCCACTGCTCTTCTCCATCAGGAGACCTaGACGACTGTAGGGCAGCTTCTCCCGATGTCCATTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: DADFHIATALLHQET*TTVGQLLPMSIHQD
Trigger: GTCCTGGTGAATGGACATCGGGAGAAGCTGCCCTACAGTCGTGCAGGTCTCCTGATGGAGAAGAGCAGTGGCTATGTGAAAATCAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp GCTCACTGCAGGGTAGTTCTCTGCCCGACACTCAATTTTCTCTGGTaGCTGGCACAAGGTCTTACCAGAGGCCCTGATGTTCTCATAGGT +
Preference number: 5 (lower is better)
Translates to: AHCRVVLCPTLNFLW*LAQGLTRGPDVLIG
Trigger: ACCTATGAGAACATCAGGGCCTCTGGTAAGACCTTGTGCCAGGCACCAGAGAAAATTGAGTGTCGGGCAGAGAACTACCCTGCAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp ACTGTCTGCCAGTGGAGGTGGTTGGCTTGGCAGTGCTCGGAACATTaGAGGAGGCTGTCCATGAACTTGTGCTTGGTTTACCTGAATGTG +
Preference number: 5 (lower is better)
Translates to: TVCQWRWLAWQCSEH*RRLSMNLCLVYLNV
Trigger: CACATTCAGGTAAACCAAGCACAAGTTCATGGACAGCCTCCTCCAATGTTCCGAGCACTGCCAAGCCAACCACCTCCACTGGCAGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTTGATGCTGGTCTTAGGCACACAGTGGTCCTaGTCATTCAGGAAGGTGCCT +
Preference number: 5 (lower is better)
Translates to: TLLKWILIAPPPSLMLVLGTQWS*SFRKVP
Trigger: AGGCACCTTCCTGAATGACAAGGACCACTGTGTGCC...TAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCTCCTCTGATGGCAACTaGCTTGTTGTAGACGTGGAG +
Preference number: 5 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPSSDGN*LVVDVE
Trigger: CTCCACGTCTACAACAAGCAAGTTGCCATCAGAGGA...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGATCAAATGAACTAGTGTaGGGCAAAGGCTTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: RTHRLAVGSLNSHRLSQRSNELV*GKGLED
Trigger: GTCCTCCAAGCCTTTGCCCAACACTAGTTCATTTGA...TCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCAGCCCCGTTTCTAGGTaGCAGCTTACTACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSSPVSR*QLTTWP
Trigger: TGGCCAAGTAGTAAGCTGCAACCTAGAAACGGGGCT...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCCCAATGGTGGAAATGTaGACACTCATTGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPPMVEM*TLIVVA
Trigger: GGCCACCACAATGAGTGTCAACATTTCCACCATTGG...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAACCTTACACTCTACTTTaGGCTCTTGGTCACCATCAG +
Preference number: 5 (lower is better)
Translates to: GHTGLLWGALTATGSHREPYTLL*ALGHHQ
Trigger: CTGATGGTGACCAAGAGCCAAAAGTAGAGTGTAAGG...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GCAGAGTTGAGAGCGCTGGGGGTTAGAGCAGGTATCCACACAGGGTaGACTGCACTCTCGGTATTCCATGTTGAAAGGGCATGTCCAATT +
Preference number: 5 (lower is better)
Translates to: AELRALGVRAGIHTG*TALSVFHVERACPI
Trigger: AATTGGACATGCCCTTTCAACATGGAATACCGAGAGTGCAGTTCACCCTGTGTGGATACCTGCTCTAACCCCCAGCGCTCTCAACTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GTGCCCCTTCTTCCTCAGGTTCTCAAATGTTTCAAAGTCCCCGCCTaGCATGCCAGCCTCTGGATGGCTCTCATCATACCAAATGGACCA +
Preference number: 5 (lower is better)
Translates to: VPLLPQVLKCFKVPA*HASLWMALIIPNGP
Trigger: TGGTCCATTTGGTATGATGAGAGCCATCCAGAGGCTGGCATGTCAGGCGGGGACTTTGAAACATTTGAGAACCTGAGGAAGAAGGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp CTGTTGAAGCAACTCAGCCCAGAGGATGGGTCACAGTTGACCTTCTaGCCCAGCTTCTCTAAGTCCATGCTAGGGAATTTCACTGCACGG +
Preference number: 5 (lower is better)
Translates to: LLKQLSPEDGSQLTF*PSFSKSMLGNFTAR
Trigger: CCGTGCAGTGAAATTCCCTAGCATGGACTTAGAGAAGCTGGGTCAGAAGGTCAACTGTGACCCATCCTCTGGGCTGAGTTGCTTCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GGAAAGTGCCTCCCTGGTCCTTGTTGTAGCACACCAGACCAGAGCTaGCATCACACTTCACTTTCTGTCCCAACTCGTCCACATTCACTC +
Preference number: 5 (lower is better)
Translates to: GKCLPGPCCSTPDQS*HHTSLSVPTRPHSL
Trigger: GAGTGAATGTGGACGAGTTGGGACAGAAAGTGAAGTGTGATGTCAGCTCTGGTCTGGTGTGCTACAACAAGGACCAGGGAGGCACTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GGCCCAGCAGTGGTCAGGGAGGTGGAGGAGTATGACTTGCTTATCTaGCTACCACTTGTTGATGTGACTGAAGATGCTGTGATATGGGGC +
Preference number: 5 (lower is better)
Translates to: GPAVVREVEEYDLLI*LPLVDVTEDAVIWG
Trigger: GCCCCATATCACAGCATCTTCAGTCACATCAACAAGTGGTAGTCAGATAAGCAAGTCATACTCCTCCACCTCCCTGACCACTGCTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp GCTTGGCAGTGCTCGGAACATTGGAGGAGGCTGTCCATGAACTTGTaGTTGGTTTACCTGAATGTGGCTCTTCTGAAGTTGGGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: AWQCSEHWRRLSMNL*LVYLNVALLKLGEG
Trigger: GCCTTCTCCCAACTTCAGAAGAGCCACATTCAGGTAAACCAAGCACAAGTTCATGGACAGCCTCCTCCAATGTTCCGAGCACTGCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp GTCTCAAATGAACTAGTGTTGGGCAAAGGCTTGGAGGACAGGGTCTaGGGAATGGAGCTGGCAGTTTCTGTCGTTGAGACCGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: VSNELVLGKGLEDRV*GMELAVSVVETDPS
Trigger: TGAAGGATCGGTCTCAACGACAGAAACTGCCAGCTCCATTCCCCAGACCCTGTCCTCCAAGCCTTTGCCCAACACTAGTTCATTTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GTGAGCATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGCTTTGTCCACTGACATaGGGGTTGGCAGGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: VSMRCLTQGLFYVTEDTQLCPLT*GLAGGG
Trigger: TCCACCACCTGCCAACCCCAATGTCAGTGGACAAAG...CTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACGTTGCTGAGAGTGAATaGGTAGTGTGGGGACTGCTG +
Preference number: 5 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNVAESE*VVWGLL
Trigger: CAGCAGTCCCCACACTACCAATTCACTCTCAGCAAC...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGCTAGGCAACATAGAGTaGCTTTTGGAAATGTCACTG +
Preference number: 5 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQLGNIE*LLEMSL
Trigger: CAGTGACATTTCCAAAAGCAACTCTATGTTGCCTAG...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCTTCTGGTCTTCATTTTaGCAGACCAGCCCCGTTTCT +
Preference number: 5 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPFWSSF*QTSPVS
Trigger: AGAAACGGGGCTGGTCTGCAAAAATGAAGACCAGAA...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp TGGATGAGGATATGGAGTCACTATACACTCTCTGACTGTCTCCGGTaGGTTCTAGATGTTCTGAGCTCAGCTCTGCCTGACCCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: WMRIWSHYTLSDCLR*VLDVLSSALPDPGS
Trigger: AGAGCCAGGGTCAGGCAGAGCTGAGCTCAGAACATCTAGAACTCACCGGAGACAGTCAGAGAGTGTATAGTGACTCCATATCCTCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp TCTGGATGGCTCTCATCATACCAAATGGACCATTGGCAGACCTCATaGACACACACGGTAGACACAGTGGAAGCTGAGCCGTTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: SGWLSSYQMDHWQTS*THTVDTVEAEPFVA
Trigger: TGCCACAAACGGCTCAGCTTCCACTGTGTCTACCGTGTGTGTTCATGAGGTCTGCCAATGGTCCATTTGGTATGATGAGAGCCATCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp ATGCTAGGGAATTTCACTGCACGGCATTCGATGCCAACGGGGGTTTaGCACACCTGGTGCCCCTTCTTCCTCAGGTTCTCAAATGTTTCA +
Preference number: 5 (lower is better)
Translates to: MLGNFTARHSMPTGV*HTWCPFFLRFSNVS
Trigger: TGAAACATTTGAGAACCTGAGGAAGAAGGGGCACCAGGTGTGTCAAACCCCCGTTGGCATCGAATGCCGTGCAGTGAAATTCCCTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GGAAAGTGCCTCCCTGGTCCTTGTTGTAGCACACCAGACCAGAGCTaGCATCACACTTCACTTTCTGTCCCAACTTGTCCACATTCACTC +
Preference number: 5 (lower is better)
Translates to: GKCLPGPCCSTPDQS*HHTSLSVPTCPHSL
Trigger: GAGTGAATGTGGACAAGTTGGGACAGAAAGTGAAGTGTGATGTCAGCTCTGGTCTGGTGTGCTACAACAAGGACCAGGGAGGCACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp AGAAGAAGCTGTGGTAAGGATTGTGGTTTTTCCAGAGGAAGAAGGTaGCTCTGTGGTACTGGTAGGCATGCTGGACGCAGGCCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: RRSCGKDCGFSRGRR*LCGTGRHAGRRPGS
Trigger: ACTTCCTGGCCTGCGTCCAGCATGCCTACCAGTACCACAGAGTCACCTTCTTCCTCTGGAAAAACCACAATCCTTACCACAGCTTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GGAAAGTGCCTCCCTGGTCCTTGTTGTAGCACACCAGACCAGAGTTaGCATCACACTTCACTTTCTGTCCCAACTCGTCCACATTCACTC +
Preference number: 5 (lower is better)
Translates to: GKCLPGPCCSTPDQS*HHTSLSVPTRPHSL
Trigger: GAGTGAATGTGGACGAGTTGGGACAGAAAGTGAAGTGTGATGTCAACTCTGGTCTGGTGTGCTACAACAAGGACCAGGGAGGCACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GTTATCCAGGAAAGTATAGGAGGTGCCATCGAAGGTCAGGTAGTGTaGGTGCCCCCATCCACTGCAGAAGCATTCACACTCGTAGTGGAA +
Preference number: 5 (lower is better)
Translates to: VIQESIGGAIEGQVV*VPPSTAEAFTLVVE
Trigger: TTCCACTACGAGTGTGAATGCTTCTGCAGTGGATGGGGGCACTCACACTACCTGACCTTCGATGGCACCTCCTATACTTTCCTGGATAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp ATATTTTTGCATATCAGCCCAAATCGCACATCACACTGGACCACCTaGTCTAGAGTTTCCAGGGGCCTGTCTGGCTCCTTCTCTGAACGG +
Preference number: 5 (lower is better)
Translates to: IFLHISPNRTSHWTT*SRVSRGLSGSFSER
Trigger: CCGTTCAGAGAAGGAGCCAGACAGGCCCCTGGAAACTCTAGAGCAGGTGGTCCAGTGTGATGTGCGATTTGGGCTGATATGCAAAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp AGGAGGGGCAGGTACCCTGGAAGCGGTCAACATCACAATACTGGTTaGAGATGGCATAGAATTGGCAGCCAGCTCCATCAGTCTTATTGT +
Preference number: 5 (lower is better)
Translates to: RRGRYPGSGQHHNTG*RWHRIGSQLHQSYC
Trigger: ACAATAAGACTGATGGAGCTGGCTGCCAATTCTATGCCATCTGCAACCAGTATTGTGATGTTGACCGCTTCCAGGGTACCTGCCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp CAGGAAGATGCCCATGAATCTGATCTTGTATGGAGGGTCTCCGCTTaGCCCTTGCTCTACCACCTTAAAGTTCCCCTCATGAAGGATCAG +
Preference number: 5 (lower is better)
Translates to: QEDAHESDLVWRVSA*PLLYHLKVPLMKDQ
Trigger: CTGATCCTTCATGAGGGGAACTTTAAGGTGGTAGAGCAAGGGCCAAGCGGAGACCCTCCATACAAGATCAGATTCATGGGCATCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp ATGAGTCCAAAGTCCACATTACAAACCACCTCCTGGCCCAGCTTCTaGAAGGATATGTTGGGAAAGAGGACGGCTTCACACTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: MSPKSTLQTTSWPSF*KDMLGKRTASHSMS
Trigger: GGACATCGAGTGTGAAGCCGTCCTCTTTCCCAACATATCCTTCCAGAAGCTGGGCCAGGAGGTGGTTTGTAATGTGGACTTTGGACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp GACATCACACTTCACTTTCTGTCCCAACTCGTCCACATTCACTCCTaGGTAGTTCTGGGCCATACACCTGATGTCCTGAGGCTTCTCACA +
Preference number: 5 (lower is better)
Translates to: DITLHFLSQLVHIHS*VVLGHTPDVLRLLT
Trigger: TGTGAGAAGCCTCAGGACATCAGGTGTATGGCCCAGAACTACCCAGGAGTGAATGTGGACGAGTTGGGACAGAAAGTGAAGTGTGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp AATGCTCACTGCAGGGTAGTTCTCTGCCCGACACTCAATTTTCTCTaGTGCCTGGCACAAGGTCTTACCAGAGGCCCTGATGTTCTCATA +
Preference number: 5 (lower is better)
Translates to: NAHCRVVLCPTLNFL*CLAQGLTRGPDVLI
Trigger: TATGAGAACATCAGGGCCTCTGGTAAGACCTTGTGCCAGGCACCAGAGAAAATTGAGTGTCGGGCAGAGAACTACCCTGCAGTGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACCCCTTTAGTGTCACTGCTTaGAGGCAGTTCTCCGTATCT +
Preference number: 5 (lower is better)
Translates to: ARVYCSLGMSEHRPLFNPFSVTA*RQFSVS
Trigger: AGATACGGAGAACTGCCTCAAAGCAGTGACACTAAA...GGGGTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAAAAGAAGGATGATGGCTaGAAGATGGTAATGTTGCCT +
Preference number: 5 (lower is better)
Translates to: GHTGLLWGALTATGSHREKKDDG*KMVMLP
Trigger: AGGCAACATTACCATCTTCAAGCCATCATCCTTCTT...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCCGTGTGGTGAAGTCATaGATGGCATTGTCGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSRVVKS*MALSSK
Trigger: CTTTGACGACAATGCCATCAATGACTTCACCACACG...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp AGTGCCAGGGTTTATTGCAGCTTAGGGATGAGTGAGCACAGACCCCTCTTCAACTCAAATGAACTAGTGTaGGGCAGAGGCTTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: SARVYCSLGMSEHRPLFNSNELV*GRGLED
Trigger: GTCCTCCAAGCCTCTGCCCAACACTAGTTCATTTGA...GTTGAAGAGGGGTCTGTGCTCACTCATCCCTAAGCTGCAATAAACCCTGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ACCCTCTTTGATGCTGGTCTTAACAGTGGCAGGCGGAGGGTGGAGCAGAGGCAGCTGCAAAGGTCCCGATaGGTTGATATTTTTGCATAT +
Preference number: 5 (lower is better)
Translates to: TLFDAGLNSGRRRVEQRQLQRSR*VDIFAY
Trigger: ATATGCAAAAATATCAACCAATCGGGACCTTTGCAG...CTGCCTCTGCTCCACCCTCCGCCTGCCACTGTTAAGACCAGCATCAAAGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GTGACATGCCTTGTGGATGAGGATATGGAGTCACTATACACTCTCTaGCTGTCTCCGGTGAGTTCTAGATGTTCTGAGCTCAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VTCLVDEDMESLYTL*LSPVSSRCSELSSA
Trigger: GGCAGAGCTGAGCTCAGAACATCTAGAACTCACCGGAGACAGTCAGAGAGTGTATAGTGACTCCATATCCTCATCCACAAGGCATGTCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp TTTTTCTCTTCTCTGGTCCAGGACTGTGATTCTGAGGATGCTGTATaGGTGGTAAGTGTAGGCGAAGAGGGTCTTCTGCTGGTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: FFSSLVQDCDSEDAV*VVSVGEEGLLLVSG
Trigger: GCCTGACACCAGCAGAAGACCCTCTTCGCCTACACTTACCACTCATACAGCATCCTCAGAATCACAGTCCTGGACCAGAGAAGAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp CCAGTCGTCGACTGTAATGTCTCAGGAAAGATCTTGGGTGTTGTATaGATTGAGGAGACGCTCCTTGGGCTGCTGGTTTCCGTGATGCTT +
Preference number: 5 (lower is better)
Translates to: PVVDCNVSGKILGVV*IEETLLGLLVSVML
Trigger: AAGCATCACGGAAACCAGCAGCCCAAGGAGCGTCTCCTCAATTCATACAACACCCAAGATCTTTCCTGAGACATTACAGTCGACGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp GCCCCGTTTCTAGGTTGCAGCTTACTACTTGGCCAACCTTATCAATaGTCACTGCAGGGTAGTTCTCTGCCCGACACTCAATTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: APFLGCSLLLGQPYQ*SLQGSSLPDTQFSL
Trigger: CAGAGAAAATTGAGTGTCGGGCAGAGAACTACCCTGCAGTGAGCATTGATAAGGTTGGCCAAGTAGTAAGCTGCAACCTAGAAACGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp CATTGTCTTTGCAGATGGCTACTAAGCAGGCGCCAAGGCCATCCGTaGTGTTGTAGACAACATCATTGTAGTTGTAGGTACGGCCCTCAT +
Preference number: 5 (lower is better)
Translates to: HCLCRWLLSRRQGHP*CCRQHHCSCRYGPH
Trigger: ATGAGGGCCGTACCTACAACTACAATGATGTTGTCTACAACACCACGGATGGCCTTGGCGCCTGCTTAGTAGCCATCTGCAAAGACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 90 bp GATTGGTTGATATTTTTGCATATCAGCCCAAATCGCACATCACACTaGACCACCTGCTCTAGAGTTTCCAGGGGCCTGTCTGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: DWLIFLHISPNRTSH*TTCSRVSRGLSGSF
Trigger: GAAGGAGCCAGACAGGCCCCTGGAAACTCTAGAGCAGGTGGTCCAGTGTGATGTGCGATTTGGGCTGATATGCAAAAATATCAACCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GCTTGGACAGTCCCATCTGCTTTTGTGAGCATGAGATGCCTGACACAGGGCTTGATACCAAATGGACCATaGGCAGACCTCATGAACACA +
Preference number: 5 (lower is better)
Translates to: AWTVPSAFVSMRCLTQGLIPNGP*ADLMNT
Trigger: TGTGTTCATGAGGTCTGCCAATGGTCCATTTGGTAT...CAAGCCCTGTGTCAGGCATCTCATGCTCACAAAAGCAGATGGGACTGTCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GGACACACAGGCTTGCTGTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATTGAAACAGATTTGGTaGTCACTCTGCTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: GHTGLLWGALTATGSHRELKQIW*SLCLLF
Trigger: AAACAGCAAGCAGAGTGACAACCAAATCTGTTTCAA...TTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCACAGCAAGCCTGTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGTCTTGGGGCAGGTGGTaGAATTGCAAACACACAGTG +
Preference number: 5 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLSWGRW*NCKHTV
Trigger: CACTGTGTGTTTGCAATTCAACCACCTGCCCCAAGA...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp ACCCTCCTCAAGTGGATCTTGATTGCCCCACCACCCTCTTTGATGCTGGTCTTAGCACTTGACAGGTACTaGAGTCCTCTTTTTCACAGG +
Preference number: 5 (lower is better)
Translates to: TLLKWILIAPPPSLMLVLALDRY*SPLFHR
Trigger: CCTGTGAAAAAGAGGACTCAAGTACCTGTCAAGTGC...TAAGACCAGCATCAAAGAGGGTGGTGGGGCAATCAAGATCCACTTGAGGAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp TCTCCGTATCTGTCACTCCACACTTCCGAAGATCGACCAGCACAGTaGAGCTACTATCTGCACATTTCTTGGTCAGGATGTAGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SPYLSLHTSEDRPAQ*SYYLHISWSGCSCS
Trigger: ACTGCAGCTACATCCTGACCAAGAAATGTGCAGATAGTAGCTTCACTGTGCTGGTCGATCTTCGGAAGTGTGGAGTGACAGATACGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp CACTCCACACTTCCGAAGATCGACCAGCACAGTGAAGCTACTATCTaGACATTTCTTGGTCAGGATGTAGCTGCAGTCTCCATGCACATT +
Preference number: 5 (lower is better)
Translates to: HSTLPKIDQHSEATI*TFLGQDVAAVSMHI
Trigger: AATGTGCATGGAGACTGCAGCTACATCCTGACCAAGAAATGTGCAGATAGTAGCTTCACTGTGCTGGTCGATCTTCGGAAGTGTGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAACAGGCTCCATGGCACTGTTTGCCTaGAGCTGTAACTTTTATCCA +
Preference number: 5 (lower is better)
Translates to: LNSHRLSQRMRPKQPTGSMALFA*SCNFYP
Trigger: TGGATAAAAGTTACAGCTCAAGGCAAACAGTGCCAT...GGAGCCTGTTGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp CATGAGATGCCTGACACAGGGCTTGTTTTATGTGACAGAGGACACACAGGCTTGGAGAAGCCTTTGAGGTaGTTGCTGAGAGTGAATTGG +
Preference number: 5 (lower is better)
Translates to: HEMPDTGLVLCDRGHTGLEKPLR*LLRVNW
Trigger: CCAATTCACTCTCAGCAACAACCTCAAAGGCTTCTC...CAAGCCTGTGTGTCCTCTGTCACATAAAACAAGCCCTGTGTCAGGCATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS-3UTR CAA 90 bp GTGGGGAGCCTTAACAGCCACAGGCTCTCACAGAGAATGAGGCCAAAACAGCCAAACATAGAGTTGCTTTaGGAAATGTCACTGGTGACT +
Preference number: 5 (lower is better)
Translates to: VGSLNSHRLSQRMRPKQPNIELL*EMSLVT
Trigger: AGTCACCAGTGACATTTCCAAAAGCAACTCTATGTT...TGGCTGTTTTGGCCTCATTCTCTGTGAGAGCCTGTGGCTGTTAAGGCTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp GCAATGGAGACAATCTTTTCTGTCCTGGGGGTAGAGGGTCTACTTTaGGTTGTGAATGAAGTTGAGGGTATTGGCTCCTCTGATGGCAAC +
Preference number: 5 (lower is better)
Translates to: AMETIFSVLGVEGLL*VVNEVEGIGSSDGN
Trigger: GTTGCCATCAGAGGAGCCAATACCCTCAACTTCATTCACAACTCAAAGTAGACCCTCTACCCCCAGGACAGAAAAGATTGTCTCCATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 90 bp CATCTTTCTGGTCTTCATTTTTGCAGACCAGCCCCGTTTCTAGGTTaGAGCTTACTACTTGGCCAACCTTATCAATGCTCACTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: HLSGLHFCRPAPFLG*SLLLGQPYQCSLQG
Trigger: ACCCTGCAGTGAGCATTGATAAGGTTGGCCAAGTAGTAAGCTGCAACCTAGAAACGGGGCTGGTCTGCAAAAATGAAGACCAGAAAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp AGATGGCATAGAATTGGCAGCCAGCTCCATCAGTCTTATTGTAGATaGTATCCCCAGGTAAGAACAGTTGCCCAAATGCCTGACAGAAAC +
Preference number: 5 (lower is better)
Translates to: RWHRIGSQLHQSYCR*YPQVRTVAQMPDRN
Trigger: GTTTCTGTCAGGCATTTGGGCAACTGTTCTTACCTGGGGATATCATCTACAATAAGACTGATGGAGCTGGCTGCCAATTCTATGCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 90 bp CCTGATATTCTCATATGTCTCGATGTCTCCTCCATTAATGCTAGATaGAGGGTAGTCTACATTGATCCACCTTGTCCACTGACATTGGGG +
Preference number: 5 (lower is better)
Translates to: PDILICLDVSSINAR*RVVYIDPPCPLTLG
Trigger: CCCCAATGTCAGTGGACAAGGTGGATCAATGTAGACTACCCTTCATCTAGCATTAATGGAGGAGACATCGAGACATATGAGAATATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GGGGTCTGGGGAGTGGTGCTCGGGAGAGGGCTAGGCTaGGCTAAGCAGCTGCTGCTACTGTTCCCAGGCACC +
Preference number: 6 (lower is better)
Translates to: GVWGVVLGRGLG*AKQLLLLFPGT
Trigger: GGTGCCTGGGAACAGTAGCAGCAGCTGCTTAGCTCAGCCTAGCCCTCTCCCGAGCACCACTCCCCAGACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp TGTACCGCGTGGCCCTCTGGTGTGAGGCAGGCATTTTaGAGGCACTCCCCGCAGCACTGCTCTGGCACCAGC +
Preference number: 6 (lower is better)
Translates to: CTAWPSGVRQAF*RHSPQHCSGTS
Trigger: GCTGGTGCCAGAGCAGTGCTGCGGGGAGTGCCTGCAAAATGCCTGCCTCACACCAGAGGGCCACGCGGTACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp CTGTACCGCGTGGCCCTCTGGTGTGAGGCAGGCATTTaGCAGGCACTCCCCGCAGCACTGCTCTGGCACCAG +
Preference number: 6 (lower is better)
Translates to: LYRVALWCEAGI*QALPAALLWHQ
Trigger: CTGGTGCCAGAGCAGTGCTGCGGGGAGTGCCTGCAAAATGCCTGCCTCACACCAGAGGGCCACGCGGTACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GAGGCAGCGGTGACTGGGTGTGTGGTCGTGCCTCCATaGGGAGGACTGGAGGGCTCAGAAGTGGTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: EAAVTGCVVVPP*GGLEGSEVVRE
Trigger: CTCCCTGACCACTTCTGAGCCCTCCAGTCCTCCTCATGGAGGCACGACCACACACCCAGTCACCGCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GGGGACTGCTGGGAGGCAGGGAGTAACCTTGAGAGGTaGACCTGGCAGTCACCACTGATGGGCTGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: GDCWEAGSNLER*TWQSPLMGCQR
Trigger: CCTCTGGCAGCCCATCAGTGGTGACTGCCAGGTCCACCTCTCAAGGTTACTCCCTGCCTCCCAGCAGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp CAAAGTGGCCATCCCCGTAGGCCACACAGGCACCCATaGAGGGCTTGTTGGTGCATTCCCACCGGCGGTTCT +
Preference number: 6 (lower is better)
Translates to: QSGHPRRPHRHP*RACWCIPTGGS
Trigger: AGAACCGCCGGTGGGAATGCACCAACAAGCCCTGCATGGGTGCCTGTGTGGCCTACGGGGATGGCCACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CTGCGTGGGCACACTGGCGGGAATATTCGGCAAAAGTaGCACATGGGCAGGTGGGACAGCGGCACAGGTCCT +
Preference number: 6 (lower is better)
Translates to: LRGHTGGNIRQK*HMGRWDSGTGP
Trigger: AGGACCTGTGCCGCTGTCCCACCTGCCCATGTGCCACTTTTGCCGAATATTCCCGCCAGTGTGCCCACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GCTCAGCATCAGCTCACAGAGAGGTGCAGAGGGGCATaGGGTGGAGGTCAGTGTGCTGGACACTGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: AQHQLTERCRGA*GGGQCAGHWGL
Trigger: CAGACCCCAGTGTCCAGCACACTGACCTCCACCCCATGCCCCTCTGCACCTCTCTGTGAGCTGATGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CACCCAGGTTTCATTGGGCTGTACCGCGTGGCCCTCTaGTGTGAGGCAGGCATTTTGCAGGCACTCCCCGCA +
Preference number: 6 (lower is better)
Translates to: HPGFIGLYRVAL*CEAGILQALPA
Trigger: TGCGGGGAGTGCCTGCAAAATGCCTGCCTCACACCAGAGGGCCACGCGGTACAGCCCAATGAAACCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GCCTCCAGTGGCATTGCGCCAGTTGGTACATACACCTaGGGCCCGGCAGAGTGCTGCATAGGCCTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: ASSGIAPVGTYT*GPAECCIGLQA
Trigger: AGCCTGGAGGCCTATGCAGCACTCTGCCGGGCCCAAGGTGTATGTACCAACTGGCGCAATGCCACTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp TTCATTGGGCTGTACCGCGTGGCCCTCTGGTGTGAGGCAGGCATTTaGCAGGCACTCCCCGCAGCACTGCTCTGGCACCAGCGTGTACTT +
Preference number: 6 (lower is better)
Translates to: FIGLYRVALWCEAGI*QALPAALLWHQRVL
Trigger: AAGTACACGCTGGTGCCAGAGCAGTGCTGCGGGGAGTGCCTGCAAAATGCCTGCCTCACACCAGAGGGCCACGCGGTACAGCCCAATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp GCTCCTTGGGCTGCTGGTTTCCGTGATGCTTGTTGCTaGTGTGGTGGAGGCCGAGTGAGGACTGGTCACGGT +
Preference number: 6 (lower is better)
Translates to: APWAAGFRDACC*CGGGRVRTGHG
Trigger: ACCGTGACCAGTCCTCACTCGGCCTCCACCACAGCAGCAACAAGCATCACGGAAACCAGCAGCCCAAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CTCAGTGACTGCTCTGGTCGTGGAGGCAGTGGTGACTaGGTGTGTGGTCGTGCCTCCATGAGGAGGACTGGA +
Preference number: 6 (lower is better)
Translates to: LSDCSGRGGSGD*VCGRASMRRTG
Trigger: TCCAGTCCTCCTCATGGAGGCACGACCACACACCCAGTCACCACTGCCTCCACGACCAGAGCAGTCACTGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp TCTGGAGGGATGAGCCTGTGGCACTCTGCGAAGACCTaGCTCAGCATCAGCTCACAGAGAGGTGCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: SGGMSLWHSAKT*LSISSQRGAEG
Trigger: CCCCTCTGCACCTCTCTGTGAGCTGATGCTGAGCCAGGTCTTCGCAGAGTGCCACAGGCTCATCCCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GGTGGACAGGAGAGGTCACACAAGCCTCCAGTGGCATaGCGCCAGTTGGTACATACACCTTGGGCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: GGQERSHKPPVA*RQLVHTPWARQ
Trigger: CTGCCGGGCCCAAGGTGTATGTACCAACTGGCGCAATGCCACTGGAGGCTTGTGTGACCTCTCCTGTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GCCAGCATCCCAGTTGTACTATCCTGGGTCCTCGAGTaGCAGGATGCTGGATGCAGGGGTCCACAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: ASIPVVLSWVLE*QDAGCRGPQGL
Trigger: CAGGCCCTGTGGACCCCTGCATCCAGCATCCTGCAACTCGAGGACCCAGGATAGTACAACTGGGATGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp CACTCCCCGCAGCACTGCTCTGGCACCAGCGTGTACTaGAAGCCCTGGGGACAAGAGGTGGTACAGTTCGTC +
Preference number: 6 (lower is better)
Translates to: HSPQHCSGTSVY*KPWGQEVVQFV
Trigger: GACGAACTGTACCACCTCTTGTCCCCAGGGCTTCAAGTACACGCTGGTGCCAGAGCAGTGCTGCGGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp GTCACACAAGCCTCCAGTGGCATTGCGCCAGTTGGTACATACACCTaGGGCCCGGCAGAGTGCTGCATAGGCCTCCAGGCTCTGACAGAG +
Preference number: 6 (lower is better)
Translates to: VTQASSGIAPVGTYT*GPAECCIGLQALTE
Trigger: CTCTGTCAGAGCCTGGAGGCCTATGCAGCACTCTGCCGGGCCCAAGGTGTATGTACCAACTGGCGCAATGCCACTGGAGGCTTGTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp AGGGCTGCTGACTGGCTGTGTGACTATGCTGGGCCTTaGAGTGGACCCAGTCTGTGTGCCAGGTCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: RAADWLCDYAGP*SGPSLCARSCC
Trigger: ACAGCAGGACCTGGCACACAGACTGGGTCCACTTCAAGGCCCAGCATAGTCACACAGCCAGTCAGCAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp GTGGACAGGAGAGGTCACACAAGCCTCCAGTGGCATTaGGCCAGTTGGTACATACACCTTGGGCCCGGCAGA +
Preference number: 6 (lower is better)
Translates to: VDRRGHTSLQWH*ASWYIHLGPGR
Trigger: TCTGCCGGGCCCAAGGTGTATGTACCAACTGGCGCAATGCCACTGGAGGCTTGTGTGACCTCTCCTGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CTCAGTGACTGCTCTGGTCGTAGAGGCAGTGGTGACTaGGTGTGTGGTCGTGCCTCCATGAGGAGGACTGGA +
Preference number: 6 (lower is better)
Translates to: LSDCSGRRGSGD*VCGRASMRRTG
Trigger: TCCAGTCCTCCTCATGGAGGCACGACCACACACCCAGTCACCACTGCCTCTACGACCAGAGCAGTCACTGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp TGCTGGGAGGCAGGGAGTGACCTTGAGAGGTGGACCTaGCAGTCACCACTGATGGGCTGCCAGAGGATTCTA +
Preference number: 6 (lower is better)
Translates to: CWEAGSDLERWT*QSPLMGCQRIL
Trigger: TAGAATCCTCTGGCAGCCCATCAGTGGTGACTGCCAGGTCCACCTCTCAAGGTCACTCCCTGCCTCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GCCATTCTTTGGCCATGTCCTGGCAGTCAGAAGCTATaGTGCCATCAGGCCGGCGGCAGTCGTCTATCTGGC +
Preference number: 6 (lower is better)
Translates to: AILWPCPGSQKL*CHQAGGSRLSG
Trigger: GCCAGATAGACGACTGCCGCCGGCCTGATGGCACCATAGCTTCTGACTGCCAGGACATGGCCAAAGAATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GCTGCTATTCTCATGGGTCTGGACCAGCTCATATCCTaGCTCACACGTGGGCAGGCTCTTGGGGCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: AAILMGLDQLIS*LTRGQALGAGG
Trigger: ACCACCTGCCCCAAGAGCCTGCCCACGTGTGAGCCAGGATATGAGCTGGTCCAGACCCATGAGAATAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp AGCAGGTGCACTGGCGTTCCATGGCCTGGGCCTCCATaGAGTACTTGGATATTCCAGAGCAGGAACCCTCGC +
Preference number: 6 (lower is better)
Translates to: SRCTGVPWPGPP*STWIFQSRNPR
Trigger: GCGAGGGTTCCTGCTCTGGAATATCCAAGTACTCCATGGAGGCCCAGGCCATGGAACGCCAGTGCACCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp AGCTTCTCCCGATGTCCATTCACCAGGACAGAGCCATaGGACAGCTCAATCACCAGCCCCTGGGCCCTGAGG +
Preference number: 6 (lower is better)
Translates to: SFSRCPFTRTEP*DSSITSPWALR
Trigger: CCTCAGGGCCCAGGGGCTGGTGATTGAGCTGTCCAATGGCTCTGTCCTGGTGAATGGACATCGGGAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GTGCAGTTGTCCACAGGACTGTTCACCCAGGTTTCATaGGGCTGTACCGCGTGGCCCTCTGGTGTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: VQLSTGLFTQVS*GCTAWPSGVRQ
Trigger: CTGCCTCACACCAGAGGGCCACGCGGTACAGCCCAATGAAACCTGGGTGAACAGTCCTGTGGACAACTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp GGACCAAGCAGGGTGCGACGGCAGATGTCCTCCGTATCTGTGCAGTaGCTGACAGCTGAGGGTAGGACATCCTGGCACTGCTCTGTAGGA +
Preference number: 6 (lower is better)
Translates to: GPSRVRRQMSSVSVQ*LTAEGRTSWHCSVG
Trigger: TCCTACAGAGCAGTGCCAGGATGTCCTACCCTCAGCTGTCAGCAACTGCACAGATACGGAGGACATCTGCCGTCGCACCCTGCTTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp CTGGTGGTAGGGCCAGAGGGAGACCAGGTCTCAAATGAACTAGTGTaGGGCAGAGGCTTGGAGGACAGTGTCTGGGGAGTGGAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: LVVGPEGDQVSNELV*GRGLEDSVWGVEVA
Trigger: TGCCACCTCCACTCCCCAGACACTGTCCTCCAAGCCTCTGCCCAACACTAGTTCATTTGAGACCTGGTCTCCCTCTGGCCCTACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp TCCTTAGTGGGTGGACAGGAGAGGTCACACAAGCCTCCAGTGGCATaGCGCCAGTTGGTACATACACCTTGGGCCCGGCAGAGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: SLVGGQERSHKPPVA*RQLVHTPWARQSAA
Trigger: TGCAGCACTCTGCCGGGCCCAAGGTGTATGTACCAACTGGCGCAATGCCACTGGAGGCTTGTGTGACCTCTCCTGTCCACCCACTAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp TGGGTCTGGACCAGCTCATATCCTGGCTCACACGTGGGCAGGCTCTaGGGGCAGGTGGTTGAATTGCAAACACACAGTGTCTCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: WVWTSSYPGSHVGRL*GQVVELQTHSVSGQ
Trigger: CTGCCCCGAGACACTGTGTGTTTGCAATTCAACCACCTGCCCCAAGAGCCTGCCCACGTGTGAGCCAGGATATGAGCTGGTCCAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp GCCAGGTTGGGGTTTGTCACTGTCCAGCCAGTCTGTCCAGGTGCATaGAGATTTACAGCCTGTGGAGGTGGTCCCTGTGGTTGTGAGGGC +
Preference number: 6 (lower is better)
Translates to: ARLGFVTVQPVCPGA*RFTACGGGPCGCEG
Trigger: GCCCTCACAACCACAGGGACCACCTCCACAGGCTGTAAATCTCAATGCACCTGGACAGACTGGCTGGACAGTGACAAACCCCAACCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GCCTGGAACCCTCAAGACCACGACGCAGTTGGATGTTaGAGTCCTCGTAGGTGGCCCCGCAGTGTGAAGAGA +
Preference number: 6 (lower is better)
Translates to: AWNPQDHDAVGC*SPRRWPRSVKR
Trigger: TCTCTTCACACTGCGGGGCCACCTACGAGGACTTCAACATCCAACTGCGTCGTGGTCTTGAGGGTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GACCTCATGAACACACACGGTAGACACAGTGGAAGCTaGGCCGTTTGTGGCAAGGGGTGCCAGGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: DLMNTHGRHSGS*AVCGKGCQGGG
Trigger: ACCACCACCCTGGCACCCCTTGCCACAAACGGCTCAGCTTCCACTGTGTCTACCGTGTGTGTTCATGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CAGTGTCTGGGGAGTGGAGGTGGCAGTTTCTGTCGTTaGGACCGATCCTTCAGGGGTGGTAGATCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: QCLGSGGGSFCR*DRSFRGGRSLA
Trigger: TGCCAGGGATCTACCACCCCTGAAGGATCGGTCTCAACGACAGAAACTGCCACCTCCACTCCCCAGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CACGCTTGTCCTCAGGGTCCAAAAGGTGGGCATCTCTaGGGCTTCCATACTGGTGGTAGGGCCAGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: HACPQGPKGGHL*GFHTGGRARGR
Trigger: TCTCCCTCTGGCCCTACCACCAGTATGGAAGCCTCAGAGATGCCCACCTTTTGGACCCTGAGGACAAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CAGGGTCTGGGGAATGGAGCTGGCAGTTTCTGTCGTTaGGACCGATCCTTCAGGGGTGGTAGATCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: QGLGNGAGSFCR*DRSFRGGRSLA
Trigger: TGCCAGGGATCTACCACCCCTGAAGGATCGGTCTCAACGACAGAAACTGCCAGCTCCATTCCCCAGACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GAATTGAGGAGACGCTCCTTGGGCTGCTGGTTTCCGTaGTGCTTGTTGCTGCTGTGGTGGAGGCCGAGTGAG +
Preference number: 6 (lower is better)
Translates to: ELRRRSLGCWFP*CLLLLWWRPSE
Trigger: CTCACTCGGCCTCCACCACAGCAGCAACAAGCATCACGGAAACCAGCAGCCCAAGGAGCGTCTCCTCAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GTGCTTGGCCCTGAAGGGCTGGCAGGACGGTTAGTCTaGAAGGTGGACTCCATGCTCGAGGACACTGAGGTT +
Preference number: 6 (lower is better)
Translates to: VLGPEGLAGRLV*KVDSMLEDTEV
Trigger: AACCTCAGTGTCCTCGAGCATGGAGTCCACCTTTCAGACTAACCGTCCTGCCAGCCCTTCAGGGCCAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp CCAGTTGGTACATACACCTTGGGCCCGGCAGAGTGCTaGATAGGCCTCCAGGCTCTGACAGAGCATGTCAGT +
Preference number: 6 (lower is better)
Translates to: PVGTYTLGPAEC*IGLQALTEHVS
Trigger: ACTGACATGCTCTGTCAGAGCCTGGAGGCCTATGCAGCACTCTGCCGGGCCCAAGGTGTATGTACCAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp GTACTATCCTGGGTCCTCGAGTTGCAGGATGCTGGATaGAGGGGTCCACAGGGCCTGTACTCCTTAGTGGGT +
Preference number: 6 (lower is better)
Translates to: VLSWVLELQDAG*RGPQGLYSLVG
Trigger: ACCCACTAAGGAGTACAGGCCCTGTGGACCCCTGCATCCAGCATCCTGCAACTCGAGGACCCAGGATAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GACTGGAGGGCCCAGGAGTGGTCAGGGAGGTGGAGATaGTTGTCATGCTGGACAAGGAAGCCTTTGAGGTTG +
Preference number: 6 (lower is better)
Translates to: DWRAQEWSGRWR*LSCWTRKPLRL
Trigger: CAACCTCAAAGGCTTCCTTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTCCTGGGCCCTCCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CGATCCACTTTGTCCACTGACATTGGGGTTGGCAGGTaGTGGAGAAGGTCTGTGTGCCAGGTCCTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: RSTLSTDIGVGR*WRRSVCQVLLW
Trigger: CCACAGCAGGACCTGGCACACAGACCTTCTCCACCACCTGCCAACCCCAATGTCAGTGGACAAAGTGGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp TCGTGCCTCCATGAGGAGGACTGGAGGGCTCAGAAGTaGTCAGGGAGGTGGAGATGGTTGTCATGCTGGACA +
Preference number: 6 (lower is better)
Translates to: SCLHEEDWRAQK*SGRWRWLSCWT
Trigger: TGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTTCTGAGCCCTCCAGTCCTCCTCATGGAGGCACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CAGCCTGAGTCAGGAAGTGTAGACCATGTGGATGCTTaGGTGCTTGGCCCTGAAGGGCTGGCAGGACGGTTA +
Preference number: 6 (lower is better)
Translates to: QPESGSVDHVDA*VLGPEGLAGRL
Trigger: TAACCGTCCTGCCAGCCCTTCAGGGCCAAGCACCCAAGCATCCACATGGTCTACACTTCCTGACTCAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp AAGCAGCCCTCTGCCAGCATCCCAGTTGTACTATCCTaGGTCCTCGAGTTGCAGGATGCTGGATGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: KQPSASIPVVLS*VLELQDAGCRG
Trigger: ACCCCTGCATCCAGCATCCTGCAACTCGAGGACCCAGGATAGTACAACTGGGATGCTGGCAGAGGGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CCTTGCTCTCCTGACAGCAGGTGCACTGGCGTTCCATaGCCTGGGCCTCCATGGAGTACTTGGATATTCCAG +
Preference number: 6 (lower is better)
Translates to: PCSPDSRCTGVP*PGPPWSTWIFQ
Trigger: CTGGAATATCCAAGTACTCCATGGAGGCCCAGGCCATGGAACGCCAGTGCACCTGCTGTCAGGAGAGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GGGCCAGAGGGAGACCAGGTCTCAAATGAACTAGTGTaGGGCAGAGGCTTGGAGGACAGTGTCTGGGGAGTG +
Preference number: 6 (lower is better)
Translates to: GPEGDQVSNELV*GRGLEDSVWGV
Trigger: CACTCCCCAGACACTGTCCTCCAAGCCTCTGCCCAACACTAGTTCATTTGAGACCTGGTCTCCCTCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp CACTGGCGTTCCATGGCCTGGGCCTCCATGGAGTACTaGGATATTCCAGAGCAGGAACCCTCGCAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: HWRSMAWASMEY*DIPEQEPSQKV
Trigger: CACCTTCTGCGAGGGTTCCTGCTCTGGAATATCCAAGTACTCCATGGAGGCCCAGGCCATGGAACGCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp ACACAGGCATCCAAGTACATGCTGACATCTACCAGAGCGGTGCACTaGTCAAAGGCAGGACCAAGCAGGGTGCGACGGCAGATGTCCTCC +
Preference number: 6 (lower is better)
Translates to: TQASKYMLTSTRAVH*SKAGPSRVRRQMSS
Trigger: GGAGGACATCTGCCGTCGCACCCTGCTTGGTCCTGCCTTTGACAAGTGCACCGCTCTGGTAGATGTCAGCATGTACTTGGATGCCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp GGCACAGGTGACATTGTCCACAGGCTCCGGCTCAAGGAGAATGATTaGATTGTTGCCCTGGCACCTGGCCACTGTGCAGTTCTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: GTGDIVHRLRLKEND*IVALAPGHCAVLQG
Trigger: ACCCTGGAGAACTGCACAGTGGCCAGGTGCCAGGGCAACAATCAAATCATTCTCCTTGAGCCGGAGCCTGTGGACAATGTCACCTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp TATCCTGGCTCACACGTGGGCAGGCTCTTGGGGCAGGTGGTTGAATaGCAAACACACAGTGTCTCGGGGCAGCATGGATTGTCAGCACTG +
Preference number: 6 (lower is better)
Translates to: YPGSHVGRLLGQVVE*QTHSVSGQHGLSAL
Trigger: CAGTGCTGACAATCCATGCTGCCCCGAGACACTGTGTGTTTGCAATTCAACCACCTGCCCCAAGAGCCTGCCCACGTGTGAGCCAGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp TGGTATGCAGTGCAGTTGTCCACAGGACTGTTCACCCAGGTTTCATaGGGCTGTACCGCGTGGCCCTCTGGTGTGAGGCAGGCATTTTGC +
Preference number: 6 (lower is better)
Translates to: WYAVQLSTGLFTQVS*GCTAWPSGVRQAFC
Trigger: GCAAAATGCCTGCCTCACACCAGAGGGCCACGCGGTACAGCCCAATGAAACCTGGGTGAACAGTCCTGTGGACAACTGCACTGCATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp TCCGTGATGCTTGTTGCTGCTGTGGTGGAGGCCGAGTaGGGACTGGTCACGGTCAGACTAGTGTTGGGAAGA +
Preference number: 6 (lower is better)
Translates to: SVMLVAAVVEAE*GLVTVRLVLGR
Trigger: TCTTCCCAACACTAGTCTGACCGTGACCAGTCCTCACTCGGCCTCCACCACAGCAGCAACAAGCATCACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp TGGCAAGGCTCCTGGTCCCACACTTTGATAGGCAAGTaGCGGTTGGCACAGGTGACATTGTCCACAGGCTCC +
Preference number: 6 (lower is better)
Translates to: WQGSWSHTLIGK*RLAQVTLSTGS
Trigger: GGAGCCTGTGGACAATGTCACCTGTGCCAACCGTCACTTGCCTATCAAAGTGTGGGACCAGGAGCCTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp TGCATAGTTACAGCTACATCATGGACCTTGCTCTCCTaGCAGCAGGTGCACTGGCGTTCCATGGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: CIVTATSWTLLS*QQVHWRSMAWA
Trigger: GGCCCAGGCCATGGAACGCCAGTGCACCTGCTGTCAGGAGAGCAAGGTCCATGATGTAGCTGTAACTATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp GGAACTGTCTGCCAGTGGAGGTGGTTGGCTTGGCAGTaGTCGGAACATTGGAGGAGGCTGTCCATGAACTTG +
Preference number: 6 (lower is better)
Translates to: GTVCQWRWLAWQ*SEHWRRLSMNL
Trigger: CAAGTTCATGGACAGCCTCCTCCAATGTTCCGAGCACTGCCAAGCCAACCACCTCCACTGGCAGACAGTTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp ATTCTTTGGCCATGTCCTGGCAGTCAGAAGCTATGGTaGCATCAGGCCGGCGGCAGTCGTCTATCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: ILWPCPGSQKLW*HQAGGSRLSGC
Trigger: ACAGCCAGATAGACGACTGCCGCCGGCCTGATGGCACCATAGCTTCTGACTGCCAGGACATGGCCAAAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp TGCCCTTATAATGCTGCTGCAGCCGGACAAACACACTaGTCTTCCTGTCCCAGGACACGACTATCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: CPYNAAAAGQTH*SSCPRTRLSRC
Trigger: GCAGCGGGATAGTCGTGTCCTGGGACAGGAAGACCAGTGTGTTTGTCCGGCTGCAGCAGCATTATAAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp ACACACTGGAGGCCACCAGGGGTGCAGAGACAACTCTaGCAATTCTCAGCTGTAGGGACCTGTGTGCCAATG +
Preference number: 6 (lower is better)
Translates to: THWRPPGVQRQL*QFSAVGTCVPM
Trigger: CATTGGCACACAGGTCCCTACAGCTGAGAATTGCCAGAGTTGTCTCTGCACCCCTGGTGGCCTCCAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp AGTGTAGGCGAAGAGGGTCTTCTGCTGGTGTCAGGCTaGGAGGGAGTGGTACTTATGCCCAAGGTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: SVGEEGLLLVSG*EGVVLMPKVRE
Trigger: CTCTCTGACCTTGGGCATAAGTACCACTCCCTCCCAGCCTGACACCAGCAGAAGACCCTCTTCGCCTACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GAGGAGGACTGGAGGGCTCAGAAGTGGTCAGGGAGGTaGAGATGGTTGTCATGCTGGACAGAGAAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: EEDWRAQKWSGR*RWLSCWTEKPL
Trigger: CAAAGGCTTCTCTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTTCTGAGCCCTCCAGTCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CAGCTTCTGAAGAAGGCATCTGGAGGGATGAGCCTGTaGCACTCTGCGAAGACCTGGCTCAGCATCAGCTCA +
Preference number: 6 (lower is better)
Translates to: QLLKKASGGMSL*HSAKTWLSISS
Trigger: TGAGCTGATGCTGAGCCAGGTCTTCGCAGAGTGCCACAGGCTCATCCCTCCAGATGCCTTCTTCAGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GACACACAGATGTCCATGCGTGAGTTGAAGAGGAGCTaGTTCTCAGGGCAGAAGCAGCCCTCTGCCAGCATC +
Preference number: 6 (lower is better)
Translates to: DTQMSMRELKRS*FSGQKQPSASI
Trigger: GATGCTGGCAGAGGGCTGCTTCTGCCCTGAGAACCAGCTCCTCTTCAACTCACGCATGGACATCTGTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CATGGGTCTGGACCAGCTCATATCCTGGCTCACACGTaGGCAGGCTCTTGGGGCAGGTGGTTGAATTGCAAA +
Preference number: 6 (lower is better)
Translates to: HGSGPAHILAHT*AGSWGRWLNCK
Trigger: TTTGCAATTCAACCACCTGCCCCAAGAGCCTGCCCACGTGTGAGCCAGGATATGAGCTGGTCCAGACCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp TCCAAGTACATGCTGACATCTACCAGAGCGGTGCACTaGTCAAAGGCAGGACCAAGCAGGGTGCGACGGCAG +
Preference number: 6 (lower is better)
Translates to: SKYMLTSTRAVH*SKAGPSRVRRQ
Trigger: CTGCCGTCGCACCCTGCTTGGTCCTGCCTTTGACAAGTGCACCGCTCTGGTAGATGTCAGCATGTACTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GTTCTAGGGAACTGTCTGCCAGTGGAGGTGGTTGGCTaGGCAGTGCTCGGAACATTGGAGGAGGCTGTCCAT +
Preference number: 6 (lower is better)
Translates to: VLGNCLPVEVVG*AVLGTLEEAVH
Trigger: ATGGACAGCCTCCTCCAATGTTCCGAGCACTGCCAAGCCAACCACCTCCACTGGCAGACAGTTCCCTAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GGGCCAGAGGGAGACCAGGTCTCAAATGAACTAGTGTaGGGCAAAGGCTTGGAGGACAGGGTCTGGGGAATG +
Preference number: 6 (lower is better)
Translates to: GPEGDQVSNELV*GKGLEDRVWGM
Trigger: CATTCCCCAGACCCTGTCCTCCAAGCCTTTGCCCAACACTAGTTCATTTGAGACCTGGTCTCCCTCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp CAGCTGCTGCTACTGTTCCCAGGCACCAGCCATTCTTaGGCCATGTCCTGGCAGTCAGAAGCTATGGTGCCA +
Preference number: 6 (lower is better)
Translates to: QLLLLFPGTSHS*AMSWQSEAMVP
Trigger: TGGCACCATAGCTTCTGACTGCCAGGACATGGCCAAAGAATGGCTGGTGCCTGGGAACAGTAGCAGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp TCACACGTGGGCAGGCTCTTGGGGCAGGTGGTTGAATaGCAAACACACAGTGTCTCGGGGCAGCATGGATTG +
Preference number: 6 (lower is better)
Translates to: SHVGRLLGQVVE*QTHSVSGQHGL
Trigger: CAATCCATGCTGCCCCGAGACACTGTGTGTTTGCAATTCAACCACCTGCCCCAAGAGCCTGCCCACGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp CTGGTGGTAGGGCCTGAGGGAGACCATGTCTCAATTGAACTAGTGTaGGGCAAAGGCTTAGAGGACAGGGTCTGGGGAGTAGCGGTGGTA +
Preference number: 6 (lower is better)
Translates to: LVVGPEGDHVSIELV*GKGLEDRVWGVAVV
Trigger: TACCACCGCTACTCCCCAGACCCTGTCCTCTAAGCCTTTGCCCAACACTAGTTCAATTGAGACATGGTCTCCCTCAGGCCCTACCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp ACTGGTGGTAGGGCCAGAGGGAGACCAGGTCTCAAATaGACTAGTGTTGGGCAGAGGCTTGGAGGACAGTGT +
Preference number: 6 (lower is better)
Translates to: TGGRARGRPGLK*TSVGQRLGGQC
Trigger: ACACTGTCCTCCAAGCCTCTGCCCAACACTAGTTCATTTGAGACCTGGTCTCCCTCTGGCCCTACCACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GATGGGCTGCCAGAGGATTCTAGACTCTTGGGATGCTaGGTGCTCACTGAGGTGACTGTGAGAGGAGTGGTG +
Preference number: 6 (lower is better)
Translates to: DGLPEDSRLLGC*VLTEVTVRGVV
Trigger: CACCACTCCTCTCACAGTCACCTCAGTGAGCACTCAGCATCCCAAGAGTCTAGAATCCTCTGGCAGCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GAGGGAACTGTAGGGAGCTCTGAGGTGGTCTTGGTATaGGGTCTTGAGGACAGGGTCTCAGTGACTGCTCTG +
Preference number: 6 (lower is better)
Translates to: EGTVGSSEVVLV*GLEDRVSVTAL
Trigger: CAGAGCAGTCACTGAGACCCTGTCCTCAAGACCTCATACCAAGACCACCTCAGAGCTCCCTACAGTTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp GCCCAGGAGTGGTCAGGGAGGTGGAGATGGTTGTCATaGTGGACAAGGAAGCCTTTGAGGTTGTTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: AQEWSGRWRWLS*WTRKPLRLLLR
Trigger: TCTCAGCAACAACCTCAAAGGCTTCCTTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp GCCCAGGAGTGGTCAGGGAGGTGGAGATGGTTGTCATaGTGGACAGAGAAGCCTTTGAGGTTGTTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: AQEWSGRWRWLS*WTEKPLRLLLR
Trigger: TCTCAGCAACAACCTCAAAGGCTTCTCTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp CATATCAGCCCAAATCGCACATCACACTGGACCACCTaGTCTAGAGTTTCCAGGGGCCTGTCTGGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: HISPNRTSHWTT*SRVSRGLSGSF
Trigger: GAAGGAGCCAGACAGGCCCCTGGAAACTCTAGAGCAGGTGGTCCAGTGTGATGTGCGATTTGGGCTGATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp CACTGGGCCAGGTCACAGTCACAAAGCCAGCTTCTGTaGACTGTGGGGGTTTATCCTGGCTCTCACACTTCA +
Preference number: 6 (lower is better)
Translates to: HWARSQSQSQLL*TVGVYPGSHTS
Trigger: TGAAGTGTGAGAGCCAGGATAAACCCCCACAGTGCACAGAAGCTGGCTTTGTGACTGTGACCTGGCCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp TGTGGCAAGGGGTGCCAGGGTGGTGGTGAATGTGAATaGTGTGGTAGACGGGACTTCATGGCACACTTCAGT +
Preference number: 6 (lower is better)
Translates to: CGKGCQGGGECE*CGRRDFMAHFS
Trigger: ACTGAAGTGTGCCATGAAGTCCCGTCTACCACACCATTCACATTCACCACCACCCTGGCACCCCTTGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp AAACCACCTCCTGGCCCAGCTTCTGGAAGGATATGTTaGGAAAGAGGACGGCTTCACACTCGATGTCCACGG +
Preference number: 6 (lower is better)
Translates to: KPPPGPASGRIC*ERGRLHTRCPR
Trigger: CCGTGGACATCGAGTGTGAAGCCGTCCTCTTTCCCAACATATCCTTCCAGAAGCTGGGCCAGGAGGTGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GACTGGAGGGCTCAGAAGTGGTCAGGGAGGTGGAGATaGTTGTCATGCTGGACAGAGAAGCCTTTGAGGTTG +
Preference number: 6 (lower is better)
Translates to: DWRAQKWSGRWR*LSCWTEKPLRL
Trigger: CAACCTCAAAGGCTTCTCTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTTCTGAGCCCTCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CTGTGGGCAAGGATGCTCAGGTTACCATGGCGAGGGTaGATCTCTCTCATGAGCACGGAGGTACAGTTATCC +
Preference number: 6 (lower is better)
Translates to: LWARMLRLPWRG*ISLMSTEVQLS
Trigger: GGATAACTGTACCTCCGTGCTCATGAGAGAGATCCACCCTCGCCATGGTAACCTGAGCATCCTTGCCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp AGCTGCTGCTACTGTTCCCAGGCACCAGCCATTCTTTaGCCATGTCCTGGCAGTCAGAAGCTATGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: SCCYCSQAPAIL*PCPGSQKLWCH
Trigger: ATGGCACCATAGCTTCTGACTGCCAGGACATGGCCAAAGAATGGCTGGTGCCTGGGAACAGTAGCAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CCAGGTCACAGTCACAAAGCCAGCTTCTGTGCACTGTaGGGGTTTATCCTGGCTCTCACACTTCACTGGCTC +
Preference number: 6 (lower is better)
Translates to: PGHSHKASFCAL*GFILALTLHWL
Trigger: GAGCCAGTGAAGTGTGAGAGCCAGGATAAACCCCCACAGTGCACAGAAGCTGGCTTTGTGACTGTGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CCAGCTCATATCCTGGCTCACACGTGGGCAGGCTCTTaGGGCAGGTGGTTGAATTGCAAACACACAGTGTCT +
Preference number: 6 (lower is better)
Translates to: PAHILAHTWAGS*GRWLNCKHTVS
Trigger: AGACACTGTGTGTTTGCAATTCAACCACCTGCCCCAAGAGCCTGCCCACGTGTGAGCCAGGATATGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GAATTTCACTGCACGGCATTCGATGCCAACGGGGGTTaGACACACCTGGTGCCCCTTCTTCCTCAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: EFHCTAFDANGG*THLVPLLPQVL
Trigger: GAGAACCTGAGGAAGAAGGGGCACCAGGTGTGTCAAACCCCCGTTGGCATCGAATGCCGTGCAGTGAAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GTCTACATCGATCCACTTTGTCCACTGACATTGGGGTaGGCAGGTGGTGGAGGAGGTCTCAGGGCTGCTGAT +
Preference number: 6 (lower is better)
Translates to: VYIDPLCPLTLG*AGGGGGLRAAD
Trigger: ATCAGCAGCCCTGAGACCTCCTCCACCACCTGCCAACCCCAATGTCAGTGGACAAAGTGGATCGATGTAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp AGGGTAGTCTACATCGATCCACTTTGTCCACTGACATaGGGGTTGGCAGGTGGTGGAGGAGGTCTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RVVYIDPLCPLT*GLAGGGGGLRA
Trigger: AGCCCTGAGACCTCCTCCACCACCTGCCAACCCCAATGTCAGTGGACAAAGTGGATCGATGTAGACTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp CAAACCACCTCCTGGCCCAGCTTCTGGAAGGATATGTaGGGAAAGAGGACGGCTTCACACTCGATGTCCACG +
Preference number: 6 (lower is better)
Translates to: QTTSWPSFWKDM*GKRTASHSMST
Trigger: CGTGGACATCGAGTGTGAAGCCGTCCTCTTTCCCAACATATCCTTCCAGAAGCTGGGCCAGGAGGTGGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp AGGGTAGTCTACATTGATCCACCTTGTCCACTGACATaGGGGTTGGCAGGTGGTGGAGGAGGTCTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RVVYIDPPCPLT*GLAGGGGGLRA
Trigger: AGCCCTGAGACCTCCTCCACCACCTGCCAACCCCAATGTCAGTGGACAAGGTGGATCAATGTAGACTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp GACGGGACTTCATGGCACACTTCAGTTGTGCGTGCTATAGTCCCATaGTCTTTGCAGATGGCTACTAAGCAGGCGCCAAGGCCATCCGTG +
Preference number: 6 (lower is better)
Translates to: DGTSWHTSVVRAIVP*SLQMATKQAPRPSV
Trigger: CACGGATGGCCTTGGCGCCTGCTTAGTAGCCATCTGCAAAGACAATGGGACTATAGCACGCACAACTGAAGTGTGCCATGAAGTCCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp CCAGAGGGAGACCAGGTCTCAAATGAACTAGTGTTGGGCAAAGGCTaGGAGGACAGGGTCTGGGGAATGGAGCTGGCAGTTTCTGTCGTT +
Preference number: 6 (lower is better)
Translates to: PEGDQVSNELVLGKG*EDRVWGMELAVSVV
Trigger: AACGACAGAAACTGCCAGCTCCATTCCCCAGACCCTGTCCTCCAAGCCTTTGCCCAACACTAGTTCATTTGAGACCTGGTCTCCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp CCTGGGGACAAGAGGTGGTACAGTTCGTCTCCTTACACTCTACTTTaGGCTCTTGGTCACCATCAGAGAGGCAGGTGCATGTGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: PGDKRWYSSSPYTLL*ALGHHQRGRCMCGR
Trigger: CCTGCCACACATGCACCTGCCTCTCTGATGGTGACCAAGAGCCAAAAGTAGAGTGTAAGGAGACGAACTGTACCACCTCTTGTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp TTGGATGTTGAAGTCCTCGTAGGTGGCCCCGCAGTGTaGAGAGAAGACATAGTTACAGAGGCCAGGGAAGCG +
Preference number: 6 (lower is better)
Translates to: LDVEVLVGGPAV*REDIVTEAREA
Trigger: CGCTTCCCTGGCCTCTGTAACTATGTCTTCTCTTCACACTGCGGGGCCACCTACGAGGACTTCAACATCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp AGAGCGCTGGGGGTTAGAGCAGGTATCCACACAGGGTaGACTGCACTCTCGGTATTCCATGTTGAAAGGGCA +
Preference number: 6 (lower is better)
Translates to: RALGVRAGIHTG*TALSVFHVERA
Trigger: TGCCCTTTCAACATGGAATACCGAGAGTGCAGTTCACCCTGTGTGGATACCTGCTCTAACCCCCAGCGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CCACTCCCGGGCGAAGTTCTCATTCTCCACACTGTATaGGCAGGGGTCTTCATAGGTGTTCTTGGAGTTGGG +
Preference number: 6 (lower is better)
Translates to: PLPGEVLILHTV*AGVFIGVLGVG
Trigger: CCCAACTCCAAGAACACCTATGAAGACCCCTGCTCATACAGTGTGGAGAATGAGAACTTCGCCCGGGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GAGGAAACTGTAGGGAGCTCTGAGGTGGTCTTGGTATaGGGTCTTGAGGACAGGGTCTCAGTGACTGCTCTG +
Preference number: 6 (lower is better)
Translates to: EETVGSSEVVLV*GLEDRVSVTAL
Trigger: CAGAGCAGTCACTGAGACCCTGTCCTCAAGACCTCATACCAAGACCACCTCAGAGCTCCCTACAGTTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GGTTTGTCACTGTCCAGCCAGTCTGTCCAGGTGCATTaGGATTTACAGCCTGTGGAGGTGGTCCCTGTGGTT +
Preference number: 6 (lower is better)
Translates to: GLSLSSQSVQVH*DLQPVEVVPVV
Trigger: AACCACAGGGACCACCTCCACAGGCTGTAAATCTCAATGCACCTGGACAGACTGGCTGGACAGTGACAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GTTAGTCTGAAAGGTGGACTCCATGCTCGAGGACACTaGGGTTGTGAAAGGGGCCAGGGGAGACTTGATGGT +
Preference number: 6 (lower is better)
Translates to: VSLKGGLHARGH*GCERGQGRLDG
Trigger: ACCATCAAGTCTCCCCTGGCCCCTTTCACAACCTCAGTGTCCTCGAGCATGGAGTCCACCTTTCAGACTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp ACATTGTCCACAGGCTCCGGCTCAAGGAGAATGATTTaGTTGTTGCCCTGGCACCTGGCCACTGTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: TLSTGSGSRRMI*LLPWHLATVQF
Trigger: GAACTGCACAGTGGCCAGGTGCCAGGGCAACAATCAAATCATTCTCCTTGAGCCGGAGCCTGTGGACAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp TGTACCGACACAGAGCCGGGCTCACATACACAGGCCTaGCAGTTGCTGATCCAGTGTTCTCCAGGAAACTTG +
Preference number: 6 (lower is better)
Translates to: CTDTEPGSHTQA*QLLIQCSPGNL
Trigger: CAAGTTTCCTGGAGAACACTGGATCAGCAACTGTCAGGCCTGTGTATGTGAGCCCGGCTCTGTGTCGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp ACATCCTGGCACTGCTCTGTAGGACCATCCAGCTTCTaGAAGTTTCCAAACTGCACAGGGGTCAGCCTAGTG +
Preference number: 6 (lower is better)
Translates to: TSWHCSVGPSSF*KFPNCTGVSLV
Trigger: CACTAGGCTGACCCCTGTGCAGTTTGGAAACTTGCAGAAGCTGGATGGTCCTACAGAGCAGTGCCAGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp CAGTTGCTGACAGCTGAGGGTAGGACATCCTGGCACTaGTCTGTAGGACCATCCAGCTTCTGCAAGTTTCCA +
Preference number: 6 (lower is better)
Translates to: QLLTAEGRTSWH*SVGPSSFCKFP
Trigger: TGGAAACTTGCAGAAGCTGGATGGTCCTACAGAGCAGTGCCAGGATGTCCTACCCTCAGCTGTCAGCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GTTTCAAAGTCCCCGCCTGACATGCCAGCCTCTGGATaGCTCTCATCATACCAAATGGACCATTGGCAGACC +
Preference number: 6 (lower is better)
Translates to: VSKSPPDMPASG*LSSYQMDHWQT
Trigger: GGTCTGCCAATGGTCCATTTGGTATGATGAGAGCCATCCAGAGGCTGGCATGTCAGGCGGGGACTTTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CAGGAGTGGTCAGGGAGGTGGAGATGGTTGTCATGCTaGACAAGGAAGCCTTTGAGGTTGTTGCTGAGAGTG +
Preference number: 6 (lower is better)
Translates to: QEWSGRWRWLSC*TRKPLRLLLRV
Trigger: CACTCTCAGCAACAACCTCAAAGGCTTCCTTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GAACTAGTGTTGGGCAAAGGCTTAGAGGACAGGGTCTaGGGAGTAGCGGTGGTAGTTTCTGTCGTTGAGACC +
Preference number: 6 (lower is better)
Translates to: ELVLGKGLEDRV*GVAVVVSVVET
Trigger: GGTCTCAACGACAGAAACTACCACCGCTACTCCCCAGACCCTGTCCTCTAAGCCTTTGCCCAACACTAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CAGGAGTGGTCAGGGAGGTGGAGATGGTTGTCATGCTaGACAGAGAAGCCTTTGAGGTTGTTGCTGAGAGTG +
Preference number: 6 (lower is better)
Translates to: QEWSGRWRWLSC*TEKPLRLLLRV
Trigger: CACTCTCAGCAACAACCTCAAAGGCTTCTCTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp TTTTGTTCTAGGGAACTGTCTGCCAGTGGAGGTGGTTaGCTTGGCAGTGCTCGGAACATTGGAGGAGGCTGT +
Preference number: 6 (lower is better)
Translates to: FCSRELSASGGG*LGSARNIGGGC
Trigger: ACAGCCTCCTCCAATGTTCCGAGCACTGCCAAGCCAACCACCTCCACTGGCAGACAGTTCCCTAGAACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp TGCAGGGTAGTTCTCTGCCCGACACTCAATTTTCTCTaGTGCCTGGCACAAGGTCTTACCAGAGGCCCTGAT +
Preference number: 6 (lower is better)
Translates to: CRVVLCPTLNFL*CLAQGLTRGPD
Trigger: ATCAGGGCCTCTGGTAAGACCTTGTGCCAGGCACCAGAGAAAATTGAGTGTCGGGCAGAGAACTACCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp TGTCTGGCTCCTTCTCTGAACGGCACTCGATGTCCTTaGGCTGATCGCAGAAGATGTAGCCAACCTCACGAA +
Preference number: 6 (lower is better)
Translates to: CLAPSLNGTRCP*ADRRRCSQPHE
Trigger: TTCGTGAGGTTGGCTACATCTTCTGCGATCAGCCCAAGGACATCGAGTGCCGTTCAGAGAAGGAGCCAGACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp ACAAAGCCAGCTTCTGTGCACTGTGGGGGTTTATCCTaGCTCTCACACTTCACTGGCTCACACTGTACCGAC +
Preference number: 6 (lower is better)
Translates to: TKPASVHCGGLS*LSHFTGSHCTD
Trigger: GTCGGTACAGTGTGAGCCAGTGAAGTGTGAGAGCCAGGATAAACCCCCACAGTGCACAGAAGCTGGCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp CCGTTGACCTGGATCCGGATGACCGTGTCCCCACTATaGAGGTTTAGTGTCACTGCTTTGAGGCAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: PLTWIRMTVSPL*RFSVTALRQFS
Trigger: GGAGAACTGCCTCAAAGCAGTGACACTAAACCTCAATAGTGGGGACACGGTCATCCGGATCCAGGTCAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp AGGGTAGTCTACATCGATCCACTTTGTCCACTGACATaGGGGTTGGCAGGTGGTGGAGAAGGTCTGTGTGCC +
Preference number: 6 (lower is better)
Translates to: RVVYIDPLCPLT*GLAGGGEGLCA
Trigger: GGCACACAGACCTTCTCCACCACCTGCCAACCCCAATGTCAGTGGACAAAGTGGATCGATGTAGACTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GGGCCTGAGGGAGACCATGTCTCAATTGAACTAGTGTaGGGCAAAGGCTTAGAGGACAGGGTCTGGGGAGTA +
Preference number: 6 (lower is better)
Translates to: GPEGDHVSIELV*GKGLEDRVWGV
Trigger: TACTCCCCAGACCCTGTCCTCTAAGCCTTTGCCCAACACTAGTTCAATTGAGACATGGTCTCCCTCAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GACCAGGTCTCAAATGAACTAGTGTTGGGCAAAGGCTaGGAGGACAGGGTCTGGGGAATGGAGCTGGCAGTT +
Preference number: 6 (lower is better)
Translates to: DQVSNELVLGKG*EDRVWGMELAV
Trigger: AACTGCCAGCTCCATTCCCCAGACCCTGTCCTCCAAGCCTTTGCCCAACACTAGTTCATTTGAGACCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GACATTGTCCACAGGCTCCGGCTCAAGGAGAATGATTaGATTGTTGCCCTGGCACCTGGCCACTGTGCAGTT +
Preference number: 6 (lower is better)
Translates to: DIVHRLRLKEND*IVALAPGHCAV
Trigger: AACTGCACAGTGGCCAGGTGCCAGGGCAACAATCAAATCATTCTCCTTGAGCCGGAGCCTGTGGACAATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp CCGCTGCGGATCTCAATGACCAGGAAGATGCCCATGAATCTGATCTaGTATGGAGGGTCTCCGCTTGGCCCTTGCTCTACCACCTTAAAG +
Preference number: 6 (lower is better)
Translates to: PLRISMTRKMPMNLI*YGGSPLGPCSTTLK
Trigger: CTTTAAGGTGGTAGAGCAAGGGCCAAGCGGAGACCCTCCATACAAGATCAGATTCATGGGCATCTTCCTGGTCATTGAGATCCGCAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp GTGGTTTTTGTTCTAGGGAACTGTCTGCCAGTGGAGGTGGTTGGCTaGGCAGTGCTCGGAACATTGGAGGAGGCTGTCCATGAACTTGTG +
Preference number: 6 (lower is better)
Translates to: VVFVLGNCLPVEVVG*AVLGTLEEAVHELV
Trigger: CACAAGTTCATGGACAGCCTCCTCCAATGTTCCGAGCACTGCCAAGCCAACCACCTCCACTGGCAGACAGTTCCCTAGAACAAAAACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp TCGTGTACTTGTAGCAAACTTTGTCCCTCCAGCCACTaGGCAGCACGCCTTTGGCAGCACAGGCAAACACAT +
Preference number: 6 (lower is better)
Translates to: SCTCSKLCPSSH*AARLWQHRQTH
Trigger: ATGTGTTTGCCTGTGCTGCCAAAGGCGTGCTGCTCAGTGGCTGGAGGGACAAAGTTTGCTACAAGTACACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp ACTCAGAGAGCGGCAGGTAGGCTGGCAAGAACTCACTaGATAGAAGTAGCCCTTGGTTTGGGGGCAGTTGTT +
Preference number: 6 (lower is better)
Translates to: TQRAAGRLARTH*IEVALGLGAVV
Trigger: AACAACTGCCCCCAAACCAAGGGCTACTTCTATTCAGTGAGTTCTTGCCAGCCTACCTGCCGCTCTCTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CTCCCTGGTCCTTGTTGTAGCACACCAGACCAGAGCTaGCATCACACTTCACTTTCTGTCCCAACTCGTCCA +
Preference number: 6 (lower is better)
Translates to: LPGPCCSTPDQS*HHTSLSVPTRP
Trigger: TGGACGAGTTGGGACAGAAAGTGAAGTGTGATGTCAGCTCTGGTCTGGTGTGCTACAACAAGGACCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GCTGAGGAGAGACCAGTGGTTAGCAAGGATGAGGTTTaGGTCTCTCTGGGTGTGCCTGTGGCTAGAGAAGAA +
Preference number: 6 (lower is better)
Translates to: AEERPVVSKDEV*VSLGVPVAREE
Trigger: TTCTTCTCTAGCCACAGGCACACCCAGAGAGACTCAAACCTCATCCTTGCTAACCACTGGTCTCTCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp AGACTAGTGTTGGGAAGAGGCATAGAACTCAGGGTCTaGGTGGCAGTAGTTGCTGATCCTGTCATTGGGGCC +
Preference number: 6 (lower is better)
Translates to: RLVLGRGIELRV*VAVVADPVIGA
Trigger: GGCCCCAATGACAGGATCAGCAACTACTGCCACTCAGACCCTGAGTTCTATGCCTCTTCCCAACACTAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp TCTCTGGTGCCTGGCACAAGGTCTTACCAGAGGCCCTaGTGTTCTCATAGGTTTCCATGTCCCCTTTTACCG +
Preference number: 6 (lower is better)
Translates to: SLVPGTRSYQRP*CSHRFPCPLLP
Trigger: CGGTAAAAGGGGACATGGAAACCTATGAGAACATCAGGGCCTCTGGTAAGACCTTGTGCCAGGCACCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GAAAGTATAGGAGGTGCCATCGAAGGTCAGGTAGTGTaGGTGCCCCCATCCACTGCAGAAGCATTCACACTC +
Preference number: 6 (lower is better)
Translates to: ESIGGAIEGQVV*VPPSTAEAFTL
Trigger: GAGTGTGAATGCTTCTGCAGTGGATGGGGGCACTCACACTACCTGACCTTCGATGGCACCTCCTATACTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp TTTCACATAGCCACTGCTCTTCTCCATCAGGAGACCTaGACGACTGTAGGGCAGCTTCTCCCGATGTCCATT +
Preference number: 6 (lower is better)
Translates to: FHIATALLHQET*TTVGQLLPMSI
Trigger: AATGGACATCGGGAGAAGCTGCCCTACAGTCGTGCAGGTCTCCTGATGGAGAAGAGCAGTGGCTATGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp GGGCTGCACACATGCAGTCCTCACTGTTCTCACAGTTaGACGTGTCAAACAAGCAGTTCGAGTAGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: GLHTCSPHCSHS*TCQTSSSSRRA
Trigger: TGCCCTTCTACTCGAACTGCTTGTTTGACACGTGCAACTGTGAGAACAGTGAGGACTGCATGTGTGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp GCTCAGAAGTGGTCAGGGAGGTGGAGATGGTTGTCATaGTGGACAGAGAAGCCTTTGAGGTTGTTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: AQKWSGRWRWLS*WTEKPLRLLLR
Trigger: TCTCAGCAACAACCTCAAAGGCTTCTCTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTTCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp AGGGTAGTTCTCTGCCCGACACTCAATTTTCTCTGGTaGCTGGCACAAGGTCTTACCAGAGGCCCTGATGTT +
Preference number: 6 (lower is better)
Translates to: RVVLCPTLNFLW*LAQGLTRGPDV
Trigger: AACATCAGGGCCTCTGGTAAGACCTTGTGCCAGGCACCAGAGAAAATTGAGTGTCGGGCAGAGAACTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CTTCACTTTCTGTCCCAACTCGTCCACATTCACTCCTaGGTAGTTCTGGGCCATACACCTGATGTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: LHFLSQLVHIHS*VVLGHTPDVLR
Trigger: CCTCAGGACATCAGGTGTATGGCCCAGAACTACCCAGGAGTGAATGTGGACGAGTTGGGACAGAAAGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CAGAAGTGGTCAGGGAGGTGGAGATGGTTGTCATGCTaGACAGAGAAGCCTTTGAGGTTGTTGCTGAGAGTG +
Preference number: 6 (lower is better)
Translates to: QKWSGRWRWLSC*TEKPLRLLLRV
Trigger: CACTCTCAGCAACAACCTCAAAGGCTTCTCTGTCCAGCATGACAACCATCTCCACCTCCCTGACCACTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GGTGAGAGGAAGAAAGAGCAGTGGACATGGTGGCCATaGGTGACGAGGTACAGTGGCTATAGTTATCACAGC +
Preference number: 6 (lower is better)
Translates to: GERKKEQWTWWP*VTRYSGYSYHS
Trigger: GCTGTGATAACTATAGCCACTGTACCTCGTCACCCATGGCCACCATGTCCACTGCTCTTTCTTCCTCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GTGCATTCCCACCGGCGGTTCTTACAGGTGCAGTTATaGCAGTCTACCCGGATGATCTCCCCAGGTCTATAT +
Preference number: 6 (lower is better)
Translates to: VHSHRRFLQVQL*QSTRMISPGLY
Trigger: ATATAGACCTGGGGAGATCATCCGGGTAGACTGCAATAACTGCACCTGTAAGAACCGCCGGTGGGAATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp CACACTTCAGTTGTGCGTGCTATAGTCCCATTGTCTTaGCAGATGGCTACTAAGCAGGCGCCAAGGCCATCC +
Preference number: 6 (lower is better)
Translates to: HTSVVRAIVPLS*QMATKQAPRPS
Trigger: GGATGGCCTTGGCGCCTGCTTAGTAGCCATCTGCAAAGACAATGGGACTATAGCACGCACAACTGAAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp ATAGTAGGTCTCGATGTCTCCTTCAAACTGGCCAGGTaGGGGTTTGTCACTGTCCAGCCAGTCTGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: IVGLDVSFKLAR*GFVTVQPVCPG
Trigger: ACCTGGACAGACTGGCTGGACAGTGACAAACCCCAACCTGGCCAGTTTGAAGGAGACATCGAGACCTACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp AACACAGCACCGTTGACCTGGATCCGGATGACCGTGTCCCCACTATaGAGGTTTAGTGTCACTGCTTTGAGGCAGTTCTCCGTATCTGTC +
Preference number: 6 (lower is better)
Translates to: NTAPLTWIRMTVSPL*RFSVTALRQFSVSV
Trigger: GACAGATACGGAGAACTGCCTCAAAGCAGTGACACTAAACCTCAATAGTGGGGACACGGTCATCCGGATCCAGGTCAACGGTGCTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp ACTTCATGGCACACTTCAGTTGTGCGTGCTATAGTCCCATTGTCTTaGCAGATGGCTACTAAGCAGGCGCCAAGGCCATCCGTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: TSWHTSVVRAIVPLS*QMATKQAPRPSVVL
Trigger: CAACACCACGGATGGCCTTGGCGCCTGCTTAGTAGCCATCTGCAAAGACAATGGGACTATAGCACGCACAACTGAAGTGTGCCATGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp CATGCTAGGGAATTTCACTGCACGGCATTCGATGCCAACGGGGGTTaGACACACCTGGTGCCCCTTCTTCCTCAGGTTCTCAAATGTTTC +
Preference number: 6 (lower is better)
Translates to: HAREFHCTAFDANGG*THLVPLLPQVLKCF
Trigger: GAAACATTTGAGAACCTGAGGAAGAAGGGGCACCAGGTGTGTCAAACCCCCGTTGGCATCGAATGCCGTGCAGTGAAATTCCCTAGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp AACTGTCTGCCAGTGGAGGTGGTTGGCTTGGCAGTGCTCGGAACATaGGAGGAGGCTGTCCATGAACTTGTGCTTGGTTTACCTGAATGT +
Preference number: 6 (lower is better)
Translates to: NCLPVEVVGLAVLGT*EEAVHELVLGLPEC
Trigger: ACATTCAGGTAAACCAAGCACAAGTTCATGGACAGCCTCCTCCAATGTTCCGAGCACTGCCAAGCCAACCACCTCCACTGGCAGACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp ATCCGGATGACCGTGTCCCCACTATTGAGGTTTAGTGTCACTGCTTaGAGGCAGTTCTCCGTATCTGTCACTCCACACTTCCGAAGATCG +
Preference number: 6 (lower is better)
Translates to: IRMTVSPLLRFSVTA*RQFSVSVTPHFRRS
Trigger: CGATCTTCGGAAGTGTGGAGTGACAGATACGGAGAACTGCCTCAAAGCAGTGACACTAAACCTCAATAGTGGGGACACGGTCATCCGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp GATGCCCATGAATCTGATCTTGTATGGAGGGTCTCCGCTTGGCCCTaGCTCTACCACCTTAAAGTTCCCCTCATGAAGGATCAGCTCGTA +
Preference number: 6 (lower is better)
Translates to: DAHESDLVWRVSAWP*LYHLKVPLMKDQLV
Trigger: TACGAGCTGATCCTTCATGAGGGGAACTTTAAGGTGGTAGAGCAAGGGCCAAGCGGAGACCCTCCATACAAGATCAGATTCATGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CTCTCATCATACCAAATGGACCATTGGCAGACCTCATaGACACACACGGTAGACACAGTGGAAGCTGAGCCG +
Preference number: 6 (lower is better)
Translates to: LSSYQMDHWQTS*THTVDTVEAEP
Trigger: CGGCTCAGCTTCCACTGTGTCTACCGTGTGTGTTCATGAGGTCTGCCAATGGTCCATTTGGTATGATGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CTTCCTCAGGTTCTCAAATGTTTCAAAGTCCCCGCCTaGCATGCCAGCCTCTGGATGGCTCTCATCATACCA +
Preference number: 6 (lower is better)
Translates to: LPQVLKCFKVPA*HASLWMALIIP
Trigger: TGGTATGATGAGAGCCATCCAGAGGCTGGCATGTCAGGCGGGGACTTTGAAACATTTGAGAACCTGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CAACTCAGCCCAGAGGATGGGTCACAGTTGACCTTCTaGCCCAGCTTCTCTAAGTCCATGCTAGGGAATTTC +
Preference number: 6 (lower is better)
Translates to: QLSPEDGSQLTF*PSFSKSMLGNF
Trigger: GAAATTCCCTAGCATGGACTTAGAGAAGCTGGGTCAGAAGGTCAACTGTGACCCATCCTCTGGGCTGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp TCTCTGGTCCAGGACTGTGATTCTGAGGATGCTGTATaGGTGGTAAGTGTAGGCGAAGAGGGTCTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: SLVQDCDSEDAV*VVSVGEEGLLL
Trigger: CAGCAGAAGACCCTCTTCGCCTACACTTACCACTCATACAGCATCCTCAGAATCACAGTCCTGGACCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CTCCCTGGTCCTTGTTGTAGCACACCAGACCAGAGCTaGCATCACACTTCACTTTCTGTCCCAACTTGTCCA +
Preference number: 6 (lower is better)
Translates to: LPGPCCSTPDQS*HHTSLSVPTCP
Trigger: TGGACAAGTTGGGACAGAAAGTGAAGTGTGATGTCAGCTCTGGTCTGGTGTGCTACAACAAGGACCAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CTCCCTGGTCCTTGTTGTAGCACACCAGACCAGAGTTaGCATCACACTTCACTTTCTGTCCCAACTCGTCCA +
Preference number: 6 (lower is better)
Translates to: LPGPCCSTPDQS*HHTSLSVPTRP
Trigger: TGGACGAGTTGGGACAGAAAGTGAAGTGTGATGTCAACTCTGGTCTGGTGTGCTACAACAAGGACCAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp AAACCACTCTGTCCATTTGCAGCGAGGTGTACAGCCTaGGTCAGGAAGTGTAGACCATGTGGATGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: KPLCPFAARCTA*VRKCRPCGCLG
Trigger: ACCCAAGCATCCACATGGTCTACACTTCCTGACTCAGGCTGTACACCTCGCTGCAAATGGACAGAGTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp AGAGGAAGAAAGAGCAGTGGACATGGTGGCCATGGGTaGCGAGGTACAGTGGCTATAGTTATCACAGCAGAG +
Preference number: 6 (lower is better)
Translates to: RGRKSSGHGGHG*RGTVAIVITAE
Trigger: CTCTGCTGTGATAACTATAGCCACTGTACCTCGTCACCCATGGCCACCATGTCCACTGCTCTTTCTTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp TGCTCAGGTTACCATGGCGAGGGTGGATCTCTCTCATaGGCACGGAGGTACAGTTATCCAGGAAAGTATAGG +
Preference number: 6 (lower is better)
Translates to: CSGYHGEGGSLS*ARRYSYPGKYR
Trigger: CCTATACTTTCCTGGATAACTGTACCTCCGTGCTCATGAGAGAGATCCACCCTCGCCATGGTAACCTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp AGGTACCCTGGAAGCGGTCAACATCACAATACTGGTTaGAGATGGCATAGAATTGGCAGCCAGCTCCATCAG +
Preference number: 6 (lower is better)
Translates to: RYPGSGQHHNTG*RWHRIGSQLHQ
Trigger: CTGATGGAGCTGGCTGCCAATTCTATGCCATCTGCAACCAGTATTGTGATGTTGACCGCTTCCAGGGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp CAGCACATAGACTCCATTCTCAGCCATACAGTGGTATaGAGTGCAGTTGTCCACAGGACTGTTCACCCAGGT +
Preference number: 6 (lower is better)
Translates to: QHIDSILSHTVV*SAVVHRTVHPG
Trigger: ACCTGGGTGAACAGTCCTGTGGACAACTGCACTGCATACCACTGTATGGCTGAGAATGGAGTCTATGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp AAGTCCACATTACAAACCACCTCCTGGCCCAGCTTCTaGAAGGATATGTTGGGAAAGAGGACGGCTTCACAC +
Preference number: 6 (lower is better)
Translates to: KSTLQTTSWPSF*KDMLGKRTASH
Trigger: GTGTGAAGCCGTCCTCTTTCCCAACATATCCTTCCAGAAGCTGGGCCAGGAGGTGGTTTGTAATGTGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp TCATGGCACACTTCAGTTGTGCGTGCTATAGTCCCATaGTCTTTGCAGATGGCTACTAAGCAGGCGCCAAGG +
Preference number: 6 (lower is better)
Translates to: SWHTSVVRAIVP*SLQMATKQAPR
Trigger: CCTTGGCGCCTGCTTAGTAGCCATCTGCAAAGACAATGGGACTATAGCACGCACAACTGAAGTGTGCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp CCATCAAAGGTGATGATGGTGCCAATGGTGGAAATGTaGACACTCATTGTGGTGGCCCCACTCAAGGACACG +
Preference number: 6 (lower is better)
Translates to: PSKVMMVPMVEM*TLIVVAPLKDT
Trigger: CGTGTCCTTGAGTGGGGCCACCACAATGAGTGTCAACATTTCCACCATTGGCACCATCATCACCTTTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GGTACAGTTCGTCTCCTTACACTCTACTTTTGGCTCTaGGTCACCATCAGAGAGGCAGGTGCATGTGTGGCA +
Preference number: 6 (lower is better)
Translates to: GTVRLLTLYFWL*VTIREAGACVA
Trigger: TGCCACACATGCACCTGCCTCTCTGATGGTGACCAAGAGCCAAAAGTAGAGTGTAAGGAGACGAACTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp ACTCCATTCTCAGCCATACAGTGGTATGCAGTGCAGTaGTCCACAGGACTGTTCACCCAGGTTTCATTGGGC +
Preference number: 6 (lower is better)
Translates to: TPFSAIQWYAVQ*STGLFTQVSLG
Trigger: GCCCAATGAAACCTGGGTGAACAGTCCTGTGGACAACTGCACTGCATACCACTGTATGGCTGAGAATGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp CCGTACAGTTGGATACATCAGGGCAAGATGTGGGGATaGGGGTCAGCACATAGACTCCATTCTCAGCCATAC +
Preference number: 6 (lower is better)
Translates to: PYSWIHQGKMWG*GSAHRLHSQPY
Trigger: GTATGGCTGAGAATGGAGTCTATGTGCTGACCCCAATCCCCACATCTTGCCCTGATGTATCCAACTGTACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GATATTCCAGAGCAGGAACCCTCGCAGAAGGTGATGTaGACCTCTGTCTCACAGCCCTTATACCGCAAGACA +
Preference number: 6 (lower is better)
Translates to: DIPEQEPSQKVM*TSVSQPLYRKT
Trigger: TGTCTTGCGGTATAAGGGCTGTGAGACAGAGGTCAACATCACCTTCTGCGAGGGTTCCTGCTCTGGAATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp TGCAGCCCCATGCCCGTCTGTACTATGATGAAGAAGGATGATGGCTaGAAGATGGTAATGTTGCCTGCTGACAAGGGCATCTGCGTAAAG +
Preference number: 6 (lower is better)
Translates to: CSPMPVCTMMKKDDG*KMVMLPADKGICVK
Trigger: CTTTACGCAGATGCCCTTGTCAGCAGGCAACATTACCATCTTCAAGCCATCATCCTTCTTCATCATAGTACAGACGGGCATGGGGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp TTGGCTTGGCAGTGCTCGGAACATTGGAGGAGGCTGTCCATGAACTaGTGCTTGGTTTACCTGAATGTGGCTCTTCTGAAGTTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: LAWQCSEHWRRLSMN*CLVYLNVALLKLGE
Trigger: TTCTCCCAACTTCAGAAGAGCCACATTCAGGTAAACCAAGCACAAGTTCATGGACAGCCTCCTCCAATGTTCCGAGCACTGCCAAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp AAGATGTTCCCATCAAAGGTGATGATGGTGCCAATGGTGGAAATGTaGACACTCATTGTGGTGGCCCCACTCAAGGACACGGTCACACCA +
Preference number: 6 (lower is better)
Translates to: KMFPSKVMMVPMVEM*TLIVVAPLKDTVTP
Trigger: TGGTGTGACCGTGTCCTTGAGTGGGGCCACCACAATGAGTGTCAACATTTCCACCATTGGCACCATCATCACCTTTGATGGGAACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp GAGTACTTGGATATTCCAGAGCAGGAACCCTCGCAGAAGGTGATGTaGACCTCTGTCTCACAGCCCTTATACCGCAAGACAGTCGCATTT +
Preference number: 6 (lower is better)
Translates to: EYLDIPEQEPSQKVM*TSVSQPLYRKTVAF
Trigger: AAATGCGACTGTCTTGCGGTATAAGGGCTGTGAGACAGAGGTCAACATCACCTTCTGCGAGGGTTCCTGCTCTGGAATATCCAAGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp CTTCCGAAGATCGACCAGCACAGTGAAGCTACTATCTaGACATTTCTTGGTCAGGATGTAGCTGCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LPKIDQHSEATI*TFLGQDVAAVS
Trigger: GGAGACTGCAGCTACATCCTGACCAAGAAATGTGCAGATAGTAGCTTCACTGTGCTGGTCGATCTTCGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp CTAGGTTGCAGCTTACTACTTGGCCAACCTTATCAATaGTCACTGCAGGGTAGTTCTCTGCCCGACACTCAA +
Preference number: 6 (lower is better)
Translates to: LGCSLLLGQPYQ*SLQGSSLPDTQ
Trigger: TTGAGTGTCGGGCAGAGAACTACCCTGCAGTGAGCATTGATAAGGTTGGCCAAGTAGTAAGCTGCAACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp TGCAGATGGCTACTAAGCAGGCGCCAAGGCCATCCGTaGTGTTGTAGACAACATCATTGTAGTTGTAGGTAC +
Preference number: 6 (lower is better)
Translates to: CRWLLSRRQGHP*CCRQHHCSCRY
Trigger: GTACCTACAACTACAATGATGTTGTCTACAACACCACGGATGGCCTTGGCGCCTGCTTAGTAGCCATCTGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp GTGGTGAATGTGAATGGTGTGGTAGACGGGACTTCATaGCACACTTCAGTTGTGCGTGCTATAGTCCCATTG +
Preference number: 6 (lower is better)
Translates to: VVNVNGVVDGTS*HTSVVRAIVPL
Trigger: CAATGGGACTATAGCACGCACAACTGAAGTGTGCCATGAAGTCCCGTCTACCACACCATTCACATTCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp ACAACAGAGCACCTTGATCAGGTAGTTGTAGCACATTaGGAAAGTGCCTCCCTGGTCCTTGTTGTAGCACAC +
Preference number: 6 (lower is better)
Translates to: TTEHLDQVVVAH*ESASLVLVVAH
Trigger: GTGTGCTACAACAAGGACCAGGGAGGCACTTTCCCAATGTGCTACAACTACCTGATCAAGGTGCTCTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CAGATGAGTCCAAAGTCCACATTACAAACCACCTCCTaGCCCAGCTTCTGGAAGGATATGTTGGGAAAGAGG +
Preference number: 6 (lower is better)
Translates to: QMSPKSTLQTTS*PSFWKDMLGKR
Trigger: CCTCTTTCCCAACATATCCTTCCAGAAGCTGGGCCAGGAGGTGGTTTGTAATGTGGACTTTGGACTCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp AGCCAGTCGTCGACTGTAATGTCTCAGGAAAGATCTTaGGTGTTGTATGAATTGAGGAGACGCTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: SQSSTVMSQERS*VLYELRRRSLG
Trigger: GCCCAAGGAGCGTCTCCTCAATTCATACAACACCCAAGATCTTTCCTGAGACATTACAGTCGACGACTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp TCCACACAGGGTGAACTGCACTCTCGGTATTCCATGTaGAAAGGGCATGTCCAATTGCAGAGATCAGGATGC +
Preference number: 6 (lower is better)
Translates to: STQGELHSRYSM*KGHVQLQRSGC
Trigger: GCATCCTGATCTCTGCAATTGGACATGCCCTTTCAACATGGAATACCGAGAGTGCAGTTCACCCTGTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp ACCGTGTCCCCACTATTGAGGTTTAGTGTCACTGCTTaGAGGCAGTTCTCCGTATCTGTCACTCCACACTTC +
Preference number: 6 (lower is better)
Translates to: TVSPLLRFSVTA*RQFSVSVTPHF
Trigger: GAAGTGTGGAGTGACAGATACGGAGAACTGCCTCAAAGCAGTGACACTAAACCTCAATAGTGGGGACACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp CAGTGCTCGGAACATTGGAGGAGGCTGTCCATGAACTaGTGCTTGGTTTACCTGAATGTGGCTCTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: QCSEHWRRLSMN*CLVYLNVALLK
Trigger: CTTCAGAAGAGCCACATTCAGGTAAACCAAGCACAAGTTCATGGACAGCCTCCTCCAATGTTCCGAGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp GCAAGACAGTCGCATTTACGTGCACTTGACAGGTACTaGAGTCCTCTTTTTCACAGGAGTAACAGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: ARQSHLRALDRY*SPLFHRSNSSP
Trigger: CGGGCTGCTGTTACTCCTGTGAAAAAGAGGACTCAAGTACCTGTCAAGTGCACGTAAATGCGACTGTCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp ATATGGAGTCACTATACACTCTCTGACTGTCTCCGGTaGGTTCTAGATGTTCTGAGCTCAGCTCTGCCTGAC +
Preference number: 6 (lower is better)
Translates to: IWSHYTLSDCLR*VLDVLSSALPD
Trigger: GTCAGGCAGAGCTGAGCTCAGAACATCTAGAACTCACCGGAGACAGTCAGAGAGTGTATAGTGACTCCATAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CTGTCACTCCACACTTCCGAAGATCGACCAGCACAGTaGAGCTACTATCTGCACATTTCTTGGTCAGGATGT +
Preference number: 6 (lower is better)
Translates to: LSLHTSEDRPAQ*SYYLHISWSGC
Trigger: ACATCCTGACCAAGAAATGTGCAGATAGTAGCTTCACTGTGCTGGTCGATCTTCGGAAGTGTGGAGTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GGTTTCCATGTCCCCTTTTACCGATCCCGAGGTCGGTaGATCCACATCAAACCATTCAGTCCACTTACACTT +
Preference number: 6 (lower is better)
Translates to: GFHVPFYRSRGR*IHIKPFSPLTL
Trigger: AAGTGTAAGTGGACTGAATGGTTTGATGTGGATTCACCGACCTCGGGATCGGTAAAAGGGGACATGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CAAGACAGTCGCATTTACGTGCACTTGACAGGTACTTaGGTCCTCTTTTTCACAGGAGTAACAGCAGCCCGT +
Preference number: 6 (lower is better)
Translates to: QDSRIYVHLTGT*VLFFTGVTAAR
Trigger: ACGGGCTGCTGTTACTCCTGTGAAAAAGAGGACTCAAGTACCTGTCAAGTGCACGTAAATGCGACTGTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp TTGAAGATGGTAATGTTGCCTGCTGACAAGGGCATCTaGGTAAAGATGGAGTTCAGGAACACAGCACCGTTG +
Preference number: 6 (lower is better)
Translates to: LKMVMLPADKGI*VKMEFRNTAPL
Trigger: CAACGGTGCTGTGTTCCTGAACTCCATCTTTACGCAGATGCCCTTGTCAGCAGGCAACATTACCATCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp GCAGCTTACTACTTGGCCAACCTTATCAATGCTCACTaGAGGGTAGTTCTCTGCCCGACACTCAATTTTCTC +
Preference number: 6 (lower is better)
Translates to: AAYYLANLINAH*RVVLCPTLNFL
Trigger: GAGAAAATTGAGTGTCGGGCAGAGAACTACCCTGCAGTGAGCATTGATAAGGTTGGCCAAGTAGTAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp ATATTTTTGCATATCAGCCCAAATCGCACATCACACTaGACCACCTGCTCTAGAGTTTCCAGGGGCCTGTCT +
Preference number: 6 (lower is better)
Translates to: IFLHISPNRTSH*TTCSRVSRGLS
Trigger: AGACAGGCCCCTGGAAACTCTAGAGCAGGTGGTCCAGTGTGATGTGCGATTTGGGCTGATATGCAAAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CCTGGAAGCGGTCAACATCACAATACTGGTTGCAGATaGCATAGAATTGGCAGCCAGCTCCATCAGTCTTAT +
Preference number: 6 (lower is better)
Translates to: PGSGQHHNTGCR*HRIGSQLHQSY
Trigger: ATAAGACTGATGGAGCTGGCTGCCAATTCTATGCCATCTGCAACCAGTATTGTGATGTTGACCGCTTCCAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp TCGGAACATTGGAGGAGGCTGTCCATGAACTTGTGCTaGGTTTACCTGAATGTGGCTCTTCTGAAGTTGGGA +
Preference number: 6 (lower is better)
Translates to: SEHWRRLSMNLC*VYLNVALLKLG
Trigger: TCCCAACTTCAGAAGAGCCACATTCAGGTAAACCAAGCACAAGTTCATGGACAGCCTCCTCCAATGTTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp TCATCTTTCTGGTCTTCATTTTTGCAGACCAGCCCCGTTTCTAGGTaGCAGCTTACTACTTGGCCAACCTTATCAATGCTCACTGCAGGG +
Preference number: 6 (lower is better)
Translates to: SSFWSSFLQTSPVSR*QLTTWPTLSMLTAG
Trigger: CCCTGCAGTGAGCATTGATAAGGTTGGCCAAGTAGTAAGCTGCAACCTAGAAACGGGGCTGGTCTGCAAAAATGAAGACCAGAAAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp CTGGAAGCGGTCAACATCACAATACTGGTTGCAGATGGCATAGAATaGGCAGCCAGCTCCATCAGTCTTATTGTAGATGATATCCCCAGG +
Preference number: 6 (lower is better)
Translates to: LEAVNITILVADGIE*AASSISLIVDDIPR
Trigger: CCTGGGGATATCATCTACAATAAGACTGATGGAGCTGGCTGCCAATTCTATGCCATCTGCAACCAGTATTGTGATGTTGACCGCTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp CCTTATACCGCAAGACAGTCGCATTTACGTGCACTTGACAGGTACTaGAGTCCTCTTTTTCACAGGAGTAACAGCAGCCCGTTTTCCTTA +
Preference number: 6 (lower is better)
Translates to: PYTARQSHLRALDRY*SPLFHRSNSSPFSL
Trigger: TAAGGAAAACGGGCTGCTGTTACTCCTGTGAAAAAGAGGACTCAAGTACCTGTCAAGTGCACGTAAATGCGACTGTCTTGCGGTATAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp CTAGGGAAGACAGTGATAGGTGGGATGAAGGTGACATaGCTTGTGGATGAGGATATGGAGTCACTATACACT +
Preference number: 6 (lower is better)
Translates to: LGKTVIGGMKVT*LVDEDMESLYT
Trigger: AGTGTATAGTGACTCCATATCCTCATCCACAAGGCATGTCACCTTCATCCCACCTATCACTGTCTTCCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp GGTCTTCATTTTTGCAGACCAGCCCCGTTTCTAGGTTaGAGCTTACTACTTGGCCAACCTTATCAATGCTCA +
Preference number: 6 (lower is better)
Translates to: GLHFCRPAPFLG*SLLLGQPYQCS
Trigger: TGAGCATTGATAAGGTTGGCCAAGTAGTAAGCTGCAACCTAGAAACGGGGCTGGTCTGCAAAAATGAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp ACACCATTCTTACTGAAGCCTGATCGTATCCACATTTaGTCCCATATAATCAGGCTCTCATCCTTCCCGCTC +
Preference number: 6 (lower is better)
Translates to: TPFLLKPDRIHI*SHIIRLSSFPL
Trigger: GAGCGGGAAGGATGAGAGCCTGATTATATGGGACCAAATGTGGATACGATCAGGCTTCAGTAAGAATGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp ATGCCCGTCTGTACTATGATGAAGAAGGATGATGGCTaGAAGATGGTAATGTTGCCTGCTGACAAGGGCATC +
Preference number: 6 (lower is better)
Translates to: MPVCTMMKKDDG*KMVMLPADKGI
Trigger: GATGCCCTTGTCAGCAGGCAACATTACCATCTTCAAGCCATCATCCTTCTTCATCATAGTACAGACGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp TGGTCTTCATTTTTGCAGACCAGCCCCGTTTCTAGGTaGCAGCTTACTACTTGGCCAACCTTATCAATGCTC +
Preference number: 6 (lower is better)
Translates to: WSSFLQTSPVSR*QLTTWPTLSML
Trigger: GAGCATTGATAAGGTTGGCCAAGTAGTAAGCTGCAACCTAGAAACGGGGCTGGTCTGCAAAAATGAAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp GTCTGTACTATGATGAAGAAGGATGATGGCTTGAAGATGGTAATGTaGCCTGCTGACAAGGGCATCTGCGTAAAGATGGAGTTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: VCTMMKKDDGLKMVM*PADKGICVKMEFRN
Trigger: GTTCCTGAACTCCATCTTTACGCAGATGCCCTTGTCAGCAGGCAACATTACCATCTTCAAGCCATCATCCTTCTTCATCATAGTACAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 90 bp ATCTTCCTCACAGCAGAGGACACGGATGTGGTAGTTGAAACAGATTaGGTTGTCACTCTGCTTGCTGTTTCTACAGATGAGTCCAAAGTC +
Preference number: 6 (lower is better)
Translates to: IFLTAEDTDVVVETD*VVTLLAVSTDESKV
Trigger: GACTTTGGACTCATCTGTAGAAACAGCAAGCAGAGTGACAACCAAATCTGTTTCAACTACCACATCCGTGTCCTCTGCTGTGAGGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp TATCTTCCTCACAGCAGAGGACACGGATGTGGTAGTTaGAACAGATTTGGTTGTCACTCTGCTTGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: YLPHSRGHGCGS*NRFGCHSACCF
Trigger: GAAACAGCAAGCAGAGTGACAACCAAATCTGTTTCAACTACCACATCCGTGTCCTCTGCTGTGAGGAAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp ACAATCTTTTCTGTCCTGGGGGTAGAGGGTCTACTTTaGGTTGTGAATGAAGTTGAGGGTATTGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: TIFSVLGVEGLL*VVNEVEGIGSS
Trigger: AGAGGAGCCAATACCCTCAACTTCATTCACAACTCAAAGTAGACCCTCTACCCCCAGGACAGAAAAGATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp AGAATTGGCAGCCAGCTCCATCAGTCTTATTGTAGATaGTATCCCCAGGTAAGAACAGTTGCCCAAATGCCT +
Preference number: 6 (lower is better)
Translates to: RIGSQLHQSYCR*YPQVRTVAQMP
Trigger: AGGCATTTGGGCAACTGTTCTTACCTGGGGATATCATCTACAATAAGACTGATGGAGCTGGCTGCCAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp ACTCAAGGACACGGTCACACCATTCTTACTGAAGCCTaGTCGTATCCACATTTGGTCCCATATAATCAGGCT +
Preference number: 6 (lower is better)
Translates to: TQGHGHTILTEA*SYPHLVPYNQA
Trigger: AGCCTGATTATATGGGACCAAATGTGGATACGATCAGGCTTCAGTAAGAATGGTGTGACCGTGTCCTTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp ATGATGAAGAAGGATGATGGCTTGAAGATGGTAATGTaGCCTGCTGACAAGGGCATCTGCGTAAAGATGGAG +
Preference number: 6 (lower is better)
Translates to: MMKKDDGLKMVM*PADKGICVKME
Trigger: CTCCATCTTTACGCAGATGCCCTTGTCAGCAGGCAACATTACCATCTTCAAGCCATCATCCTTCTTCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp ACAGCAGAGGACACGGATGTGGTAGTTGAAACAGATTaGGTTGTCACTCTGCTTGCTGTTTCTACAGATGAG +
Preference number: 6 (lower is better)
Translates to: TAEDTDVVVETD*VVTLLAVSTDE
Trigger: CTCATCTGTAGAAACAGCAAGCAGAGTGACAACCAAATCTGTTTCAACTACCACATCCGTGTCCTCTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CTCATATGTCTCGATGTCTCCTCCATTAATGCTAGATaGAGGGTAGTCTACATCGATCCACTTTGTCCACTG +
Preference number: 6 (lower is better)
Translates to: LICLDVSSINAR*RVVYIDPLCPL
Trigger: CAGTGGACAAAGTGGATCGATGTAGACTACCCTTCATCTAGCATTAATGGAGGAGACATCGAGACATATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp CTCATATGTCTCGATGTCTCCTCCATTAATGCTAGATaGAGGGTAGTCTACATTGATCCACCTTGTCCACTG +
Preference number: 6 (lower is better)
Translates to: LICLDVSSINAR*RVVYIDPPCPL
Trigger: CAGTGGACAAGGTGGATCAATGTAGACTACCCTTCATCTAGCATTAATGGAGGAGACATCGAGACATATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS GCA 72 bp AGCTACTATCTGCACATTTCTTGGTCAGGATGTAGCTaGAGTCTCCATGCACATTGTAGAGTTTCTCGTCAA +
Preference number: 6 (lower is better)
Translates to: SYYLHISWSGCS*SLHAHCRVSRQ
Trigger: TTGACGAGAAACTCTACAATGTGCATGGAGACTGCAGCTACATCCTGACCAAGAAATGTGCAGATAGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CCA 72 bp CTACCACTTGTTGATGTGACTGAAGATGCTGTGATATaGGGCCTACTAGGCAACATAGAGTTGCTTTTGGAA +
Preference number: 6 (lower is better)
Translates to: LPLVDVTEDAVI*GLLGNIELLLE
Trigger: TTCCAAAAGCAACTCTATGTTGCCTAGTAGGCCCCATATCACAGCATCTTCAGTCACATCAACAAGTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS CAA 72 bp TCACAATACTGCAAAGGTCCCGATTGGTTGATATTTTaGCATATCAGCCCAAATCGCACATCACACTGGACC +
Preference number: 6 (lower is better)
Translates to: SQYCKGPDWLIF*HISPNRTSHWT
Trigger: GGTCCAGTGTGATGTGCGATTTGGGCTGATATGCAAAAATATCAACCAATCGGGACCTTTGCAGTATTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3
CDS TCA 72 bp GGTAGTTGTCACAATACTGCAAAGGTCCCGATTGGTTaGTATTTTTGCATATCAGCCCAAATCGCACATCAC +
Preference number: 6 (lower is better)
Translates to: GSCHNTAKVPIG*YFCISAQIAHH
Trigger: GTGATGTGCGATTTGGGCTGATATGCAAAAATATCAACCAATCGGGACCTTTGCAGTATTGTGACAACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165147.3