RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MUC5AC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037974

Ensembl transcript IDs: ENSMUST00000041924.14, ENSMUST00000155534.9, ENSMUST00000163321.3

Found 722 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp AGGGGCCTCTCCTACCTCCAAGACCATCTGGGGTCGATGTCCCTCTaGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTTCTGG +
Preference number: 2 (lower is better)
Translates to: RGLSYLQDHLGSMSL*KRKRQVGRIQATFW
Trigger: CCAGAAAGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCCCAGATGGTCTTGGAGGTAGGAGAGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
3UTR CCA 72 bp AAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTaGAGAGGGGCCTCTCCTACCTCCAAGACCATCTGG +
Preference number: 3 (lower is better)
Translates to: KEPETTMSPPNQ*RGASPTSKTIW
Trigger: CCAGATGGTCTTGGAGGTAGGAGAGGCCCCTCTCCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
3UTR TCA 72 bp AGGTGCAGGTCTGAGGTGAAAGTGAGGCCAAGCAGATaGTACCTGCATCCAAGTGACTGTCATTCATGGGAC +
Preference number: 3 (lower is better)
Translates to: RCRSEVKVRPSR*YLHPSDCHSWD
Trigger: GTCCCATGAATGACAGTCACTTGGATGCAGGTATCATCTGCTTGGCCTCACTTTCACCTCAGACCTGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
3UTR TCA 72 bp GAAAGTGAGGCCAAGCAGATGATACCTGCATCCAAGTaGCTGTCATTCATGGGACCCTTGGGTGATCATGAA +
Preference number: 3 (lower is better)
Translates to: ESEAKQMIPASK*LSFMGPLGDHE
Trigger: TTCATGATCACCCAAGGGTCCCATGAATGACAGTCACTTGGATGCAGGTATCATCTGCTTGGCCTCACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCCGTCTTCTCTCAGCTaGGCCTGGCCCTGCGGACAG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQPSSLS*AWPCGQ
Trigger: CTGTCCGCAGGGCCAGGCTCAGCTGAGAGAAGACGG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGCCTGGCCTGTGCATTaGCTGCAGGCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATAWPVH*LQARAR
Trigger: CCTGGCCCTGGCCTGCAGCCAATGCACAGGCCAGGC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTCTGGGAGCAGAGGTTaGGGCCCCGCCAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATSGSRG*GPASPG
Trigger: CCCAGGACTGGCGGGGCCCCAACCTCTGCTCCCAGA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGCGCAGGGGATGTCCTaGCAGCTCCACTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQAQGMS*QLHCPP
Trigger: TGGAGGGCAGTGGAGCTGCCAGGACATCCCCTGCGC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCCTCCACGTAGCTGCTaGTGTCCACCAGGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATPPRSC*CPPGPH
Trigger: GTGCGGCCCTGGTGGACATCAGCAGCTACGTGGAGG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCTCGCAGTCACCCCCTaGGTCACAGGCACAGGCGTC +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATLAVTP*VTGTGV
Trigger: GACGCCTGTGCCTGTGACTCAGGGGGTGACTGCGAG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCCGTCTTCTCTCAGCTaGGCCTGGCCCTGCGGACAG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVPSSLS*AWPCGQ
Trigger: CTGTCCGCAGGGCCAGGCTCAGCTGAGAGAAGACGG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCGCCAGTCCTGGGGCTaGCCTCCAGCATGTGCACAC +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATRQSWG*PPACAH
Trigger: GTGTGCACATGCTGGAGGGCAGCCCCAGGACTGGCG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGCGGAGCAGTTCTTCTaGGGCACAGGGAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQAEQFF*GTGRGS
Trigger: AGACCCCCTCCCTGTGCCCCAGAAGAACTGCTCCGC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGCGCAGGGGATGTCCTaGCAGCTCCACTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVAQGMS*QLHCPP
Trigger: TGGAGGGCAGTGGAGCTGCCAGGACATCCCCTGCGC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTTGGGACCAGCCTCTTaGAGGGTCAGGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQLGPAS*RVRLGL
Trigger: CAGCCCAAGCCTGACCCTTCAAGAGGCTGGTCCCAA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGTTGAGCCTGGCCTGTaGATTGGCTGCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVVEPGL*IGCRPG
Trigger: CCCTGGCCTGCAGCCAATGCACAGGCCAGGCTCAAC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTAGGGGGTCTTGGCACTaGTCTGTGGGGCCGTCCATC +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVRGSWH*SVGPSI
Trigger: GATGGACGGCCCCACAGAGCAGTGCCAAGACCCCCT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCTGCCCTCCAGCATGTaGACACTGCCGGGAGTACTC +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQLPSSM*TLPGVL
Trigger: GAGTACTCCCGGCAGTGTGCACATGCTGGAGGGCAG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTCTGGGAGCAGAGGTTaGGGCCCCGCCAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSSGSRG*GPASPG
Trigger: CCCAGGACTGGCGGGGCCCCAACCTCTGCTCCCAGA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGGGAATGCTGGGGGTTaGAGCAGGTGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQGNAGG*SRCPHR
Trigger: CCTGTGTGGACACCTGCTCCAACCCCCAGCATTCCC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCAGGGCTACAGGCACTaGCACAAAGCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQQGYRH*HKARLW
Trigger: CCAGAGCCTGGCTTTGTGCCAGTGCCTGTAGCCCTG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCCTGGTGCTGCATGTTaGGGGGACATGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATPGAAC*GDMSGS
Trigger: GCTCCCAGACATGTCCCCTCAACATGCAGCACCAGG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTCTGGACAGGTGGGCTaGGGACAGGCCTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQSGQVG*GQAFFW
Trigger: CCAAAAGAAGGCCTGTCCTCAGCCCACCTGTCCAGA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCTGCCCTCCAGCATGTaGACACTGCCGGGAGTACTC +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVLPSSM*TLPGVL
Trigger: GAGTACTCCCGGCAGTGTGCACATGCTGGAGGGCAG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCGCCAGTCCTGGGGCTaGCCTCCAGCATGTGCACAC +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHRQSWG*PPACAH
Trigger: GTGTGCACATGCTGGAGGGCAGCCCCAGGACTGGCG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGGTAAGGGTTGGCAGTaGAGGGGTCCTTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATGKGWQ*RGPWAP
Trigger: TGGTGCCCAAGGACCCCTGCACTGCCAACCCTTACC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCTACACTCCAGGTGCTaGTGCAGCTCGGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVLHSRC*CSSGRG
Trigger: GCCTCTTCCCGAGCTGCAGCAGCACCTGGAGTGTAG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCCTGGTCCCTGTTGTTaGACACCAGGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATPGPCC*TPGPHW
Trigger: CCAGTGTGGGCCTGGTGTGCAACAACAGGGACCAGG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGAATTCTTCGGGCAGTaGAGAGGCGGAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATEFFGQ*RGGGQW
Trigger: CCACTGCCCTCCGCCTCTGCACTGCCCGAAGAATTC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGAATTCTTCGGGCAGTaGAGAGGCGGAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVEFFGQ*RGGGQW
Trigger: CCACTGCCCTCCGCCTCTGCACTGCCCGAAGAATTC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTCCTGGCAGCTCCACTaGCCTCCAGAACATGTGCAC +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQSWQLH*PPEHVH
Trigger: GTGCACATGTTCTGGAGGGCAGTGGAGCTGCCAGGA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGCCTGGCCTGTGCATTaGCTGCAGGCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEAWPVH*LQARAR
Trigger: CCTGGCCCTGGCCTGCAGCCAATGCACAGGCCAGGC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACACAGGGAGGGGGTCTTaGCACTGCTCTGTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHTGRGS*HCSVGP
Trigger: CGGCCCCACAGAGCAGTGCCAAGACCCCCTCCCTGT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTTGAGGGGACATGTCTaGGAGCAGAGGTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATLRGHV*EQRLGP
Trigger: GGGCCCCAACCTCTGCTCCCAGACATGTCCCCTCAA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGAATGCTGGGGGTTaGAGCAGGTGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVGNAGG*SRCPHR
Trigger: CCTGTGTGGACACCTGCTCCAACCCCCAGCATTCCC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGCACGGCAGGTGGGCTaGCAGGTGCTGATATGGTAT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQARQVG*QVLIWY
Trigger: ATACCATATCAGCACCTGCCAGCCCACCTGCCGTGC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGTGCAGGTGCAAATaGCCCCACTGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVGCRCK*PHCPAQ
Trigger: CTGTGCAGGACAGTGGGGCCATTTGCACCTGCACCC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCCCGGCAACCTGATGTaGTTACGGCGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATPGNLM*LRRRLK
Trigger: CTTCAGCCTCCGCCGTAACCACATCAGGTTGCCGGG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTAACAAGAGGAGGCTATaGAACCCCCAGGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATNKRRL*NPQAGG
Trigger: GCCGCCTGCCTGGGGGTTCCATAGCCTCCTCTTGTT...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGCTCGCAGTCACCCCCTaGGTCACAGGCACAGGCGTC +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWLAVTP*VTGTGV
Trigger: GACGCCTGTGCCTGTGACTCAGGGGGTGACTGCGAG...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCAGTCTTCAGGAATGTaGCAGCACAGCAGTCGCACC +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQQSSGM*QHSSRT
Trigger: GGTGCGACTGCTGTGCTGTCACATTCCTGAAGACTG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGTGGGCTCAAGGAGATaGCATTGTTGCCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQVGSRR*HCCPHR
Trigger: CCTGTGAGGGCAACAATGTCATCTCCTTGAGCCCAC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTAGGCCTGGGTACCACTaGAGTTGGAGTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVRPGYH*SWSWWR
Trigger: CCTCCACCAACTCCAACTTCAGTGGTACCCAGGCCT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGGCCTGTGCATTGGCTaGAGGCCAGGGCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWGLCIG*RPGPGL
Trigger: TAGCCCTGGCCCTGGCCTGCAGCCAATGCACAGGCC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGCCTGTGCATTGGCTaGAGGCCAGGGCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEGLCIG*RPGPGL
Trigger: TAGCCCTGGCCCTGGCCTGCAGCCAATGCACAGGCC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTCACAGACCTGGGAATaGTGGGGGTTGGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATSQTWE*WGLEQV
Trigger: CACCTGCTCCAACCCCCAGCATTCCCAGGTCTGTGA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGCCTCCATTTCCATCTaGCACCAGCCCATTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATASISI*HQPIGA
Trigger: TGCCCCAATGGGCTGGTGGCAGATGGAAATGGAGGC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGCCTCCATTTCCATCTaGCACCAGCCCATTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVASISI*HQPIGA
Trigger: TGCCCCAATGGGCTGGTGGCAGATGGAAATGGAGGC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCTGCAGGTCACATTCTaGCCCAGCTCCTCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATLQVTF*PSSSSG
Trigger: ACCACTGGAGGAGCTGGGGCAGAATGTGACCTGCAG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCTTGGCAGTAGGAGATaGTCACTGGGCCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVLGSRR*SLGPQS
Trigger: GCTCTGAGGGCCCAGTGAGCATCTCCTACTGCCAAG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCTCGCTGACCCTGAATaGCAACTGCTGGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQLADPE*QLLAMF
Trigger: GAACATGGCCAGCAGTTGGCATTCAGGGTCAGCGAG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCTTGGCACTGCTCTGTaGGGCCGTCCATCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQLGTAL*GRPSSE
Trigger: TTCAGAAGATGGACGGCCCCACAGAGCAGTGCCAAG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCATACACAGCACAGGTaGCCAGGCAAGGCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQHTQHR*PGKACL
Trigger: CAGACAAGCCTTGCCTGGCCACCTGTGCTGTGTATG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTGCCCTCATCAAAGATaGGGGCTGTTGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQCPHQR*GLLVGT
Trigger: AGTGCCCACCAACAGCCCCCATCTTTGATGAGGGCA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCAGAGGAAGGCATGGTaGACCCTGAGGTTGAGATGG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQQRKAW*TLRLRW
Trigger: CCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCCTCCAGTGGTGTGTTaGGAAAGAACTGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQPPVVC*ERTEPC
Trigger: GCAGGGCTCAGTTCTTTCCCAACACACCACTGGAGG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACTCGCAGGGGGTGGCATaGTGGAGGGGCAGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHSQGVA*WRGSLD
Trigger: GTCAAGACTGCCCCTCCACCATGCCACCCCCTGCGA...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCATGACCCCGCTAACTaGCCTGCGGGTCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSHDPAN*PAGQHH
Trigger: GTGGTGCTGACCCGCAGGCCAGTTAGCGGGGTCATG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGAGCAGTAGTGAGGGTTaGATGGGCCACAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQSSSEG*MGHKAG
Trigger: ACCAGCCTTGTGGCCCATCCAACCCTCACTACTGCT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTGCCCTGGCATGGCCTaGTACTCAGAGCCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATCPGMA*YSEPLG
Trigger: TCCTAAGGGCTCTGAGTACCAGGCCATGCCAGGGCA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTGCCCTGGCATGGCCTaGTACTCAGAGCCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVCPGMA*YSEPLG
Trigger: TCCTAAGGGCTCTGAGTACCAGGCCATGCCAGGGCA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGCCGTCCATCTTCTaGAGGTTCCCAAACTCAAGG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVGPSIF*RFPNSR
Trigger: CCTTGAGTTTGGGAACCTTCAGAAGATGGACGGCCC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCTGGTGCTGCATGTTaGGGGGACATGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSPGAAC*GDMSGS
Trigger: GCTCCCAGACATGTCCCCTCAACATGCAGCACCAGG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCACAGGTTAGCCCCCTaGGCCCAGGTTTCAGACGCA +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHHRLAP*AQVSDA
Trigger: TGCGTCTGAAACCTGGGCTCAGGGGGCTAACCTGTG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGAGTCGTCCTGGAGGATaGTATCACATGGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQSRPGG*YHMGRL
Trigger: CAGACGACCCATGTGATATCATCCTCCAGGACGACT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCGTGCTGACTCCATGTaGGGTGGGATGTGTGGTAAC +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATRADSM*GGMCGN
Trigger: GTTACCACACATCCCACCTCACATGGAGTCAGCACG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTCACACTTCACCACCTaGCCCAGATCCTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQSHFTT*PRSSIS
Trigger: AGAGATGGAGGATCTGGGTCAGGTGGTGAAGTGTGA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTTGGGACCAGCCTCTTaGAGGGTCAGGCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSLGPAS*RVRLGL
Trigger: CAGCCCAAGCCTGACCCTTCAAGAGGCTGGTCCCAA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTACTTCACAGCCCTTCTaGCTGCTGCAGTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVTSQPF*LLQFWV
Trigger: GACCCAGAACTGCAGCAGTCAGAAGGGCTGTGAAGT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTTGAGCCTGGCCTGTaGATTGGCTGCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARVEPGL*IGCRPG
Trigger: CCCTGGCCTGCAGCCAATGCACAGGCCAGGCTCAAC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGAGGGGGTCTTGGCACTaGTCTGTGGGGCCGTCCATC +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWRGSWH*SVGPSI
Trigger: GATGGACGGCCCCACAGAGCAGTGCCAAGACCCCCT...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTCCTGGCAGCTCCACTaGCCTCCAGAACATGTGTTG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATSWQLH*PPEHVL
Trigger: CAACACATGTTCTGGAGGGCAGTGGAGCTGCCAGGA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGTTGAAGAAAGCAGCTaGTGTGCCCTCCACAACCCC +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATVEESS*CALHNP
Trigger: GGGGTTGTGGAGGGCACAGCAGCTGCTTTCTTCAAC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTTAGTGCTCCTTGGGTaGAGGTGCAAATGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATLVLLG*RCKWPH
Trigger: GTGGGGCCATTTGCACCTGCACCCAAGGAGCACTAA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTTAGTGCTCCTTGGGTaGAGGTGCAAATGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVLVLLG*RCKWPH
Trigger: GTGGGGCCATTTGCACCTGCACCCAAGGAGCACTAA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTGGTAAGGGTTGGCAGTaGAGGGGTCCTTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSGKGWQ*RGPWAP
Trigger: TGGTGCCCAAGGACCCCTGCACTGCCAACCCTTACC...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGATTGGCCCTGCAGTGTaGAGAGATGCAGCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQIGPAV*RDAASY
Trigger: ATAGGAGGCTGCATCTCTGCACACTGCAGGGCCAAT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCTGGTCCCTGTTGTTaGACACCAGGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSPGPCC*TPGPHW
Trigger: CCAGTGTGGGCCTGGTGTGCAACAACAGGGACCAGG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTAACACGGGCACGATCTaGTGCACCAGCACGTATGTG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVNTGTI*CTSTYV
Trigger: CACATACGTGCTGGTGCAGCAGATCGTGCCCGTGTT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTAACACGGGCACGATCTaGTGCACCAGCACGTATGTG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATNTGTI*CTSTYV
Trigger: CACATACGTGCTGGTGCAGCAGATCGTGCCCGTGTT...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTGGCTAAAGGGCAGCTaGACCGGGTGGTTATTGACT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQWLKGS*TGWLLT
Trigger: AGTCAATAACCACCCGGTCCAGCTGCCCTTTAGCCA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCTTGGCACTGCTCTGTaGGGCCGTCCATCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVLGTAL*GRPSSE
Trigger: TTCAGAAGATGGACGGCCCCACAGAGCAGTGCCAAG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCGGAGCAGTTCTTCTaGGGCACAGGGAGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARAEQFF*GTGRGS
Trigger: AGACCCCCTCCCTGTGCCCCAGAAGAACTGCTCCGC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGTGGCACTGGGAAAATaGACCACTGGCGTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQVALGK*TTGVSQ
Trigger: CTGACTAACGCCAGTGGTCCATTTTCCCAGTGCCAC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACACGGTGGCGTGGCACTaGGAAAATGGACCACTGGCG +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHTVAWH*ENGPLA
Trigger: CGCCAGTGGTCCATTTTCCCAGTGCCACGCCACCGT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACGGGTGCAGGTGCAAATaGCCCCACTGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHGCRCK*PHCPAQ
Trigger: CTGTGCAGGACAGTGGGGCCATTTGCACCTGCACCC...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCCCCAGGCCTATAGGTaGCCTCATTGTGCACACAAG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATPQAYR*PHCAHK
Trigger: CTTGTGTGCACAATGAGGCCACCTATAGGCCTGGGG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTACACGAAAGGCATCCTaGGAGCTGCCATTCCCACCA +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVTRKAS*ELPFPP
Trigger: TGGTGGGAATGGCAGCTCCCAGGATGCCTTTCGTGT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTGCCCCACATCCTTCTaGACCACCTCCATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVCPTSF*TTSILL
Trigger: CAGCAAGATGGAGGTGGTCCAGAAGGATGTGGGGCA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGAGTTGGCTCTGGTGTTaGGCTAGTGATGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQSWLWC*ASDGQS
Trigger: ACTCTGCCCATCACTAGCCCAACACCAGAGCCAACT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCAGTTGCACTGTAGCTaGCAGTGGGTGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVQLHCS*QWVVTG
Trigger: ACCAGTGACCACCCACTGCCAGCTACAGTGCAACTG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTCGCAGGGGGTGGCATaGTGGAGGGGCAGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWSQGVA*WRGSLD
Trigger: GTCAAGACTGCCCCTCCACCATGCCACCCCCTGCGA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGGAACAATTCGGCATTaGCCAGGTCTCTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQGTIRH*PGLSSQ
Trigger: CTGAGAGGAGAGACCTGGCCAATGCCGAATTGTTCC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCATGACCCCGCTAACTaGCCTGCGGGTCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEHDPAN*PAGQHH
Trigger: GTGGTGCTGACCCGCAGGCCAGTTAGCGGGGTCATG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTAACAAGAGGAGGCTATaGAACCCCCAGGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSNKRRL*NPQAGG
Trigger: GCCGCCTGCCTGGGGGTTCCATAGCCTCCTCTTGTT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGAATGCACACGCCTTaGGCTGCACAGAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVGMHTP*AAQSDA
Trigger: TGCATCACTCTGTGCAGCCCAAGGCGTGTGCATTCC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGGAATGCACACGCCTTaGGCTGCACAGAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATGMHTP*AAQSDA
Trigger: TGCATCACTCTGTGCAGCCCAAGGCGTGTGCATTCC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGAAGTGTCGTGCTGTCTaGACAGAAGCAGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQKCRAV*TEAALC
Trigger: ACAGAGGGCTGCTTCTGTCCAGACAGCACGACACTT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCAGGGCTACAGGCACTaGCACAAAGCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSQGYRH*HKARLW
Trigger: CCAGAGCCTGGCTTTGTGCCAGTGCCTGTAGCCCTG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCTGTATTGGGTGAGCTaGTTTGGGGTGTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVLYWVS*FGVLRG
Trigger: CCCCCTCAACACCCCAAACCAGCTCACCCAATACAG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTTGGGTGAGCTGGTTTaGGGTGTTGATGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVLGELV*GVDGVL
Trigger: CAGCACCCCATCAACACCCCAAACCAGCTCACCCAA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR TCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCATCAAGCTTCATGGTaGCCCTACTCAGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVHQASW*PYSEWW
Trigger: CCACCACTCTGAGTAGGGTCACCATGAAGCTTGATG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGGTGTCCACACAGGGTaGGCCACATTCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWGVHTG*ATFLVL
Trigger: CAGCACCAGGAATGTGGCTCACCCTGTGTGGACACC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGTGTCCACACAGGGTaGGCCACATTCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEGVHTG*ATFLVL
Trigger: CAGCACCAGGAATGTGGCTCACCCTGTGTGGACACC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGAACGATGAAGAAGGTTaGAGGCCGGAAGAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQNDEEG*RPEEGS
Trigger: GCTACCTTCTTCCGGCCTTCAACCTTCTTCATCGTT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTAGTCGTCCTGGAGGATaGTATCACATGGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVSRPGG*YHMGRL
Trigger: CAGACGACCCATGTGATATCATCCTCCAGGACGACT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTGCATTGCAACTGTGTaGTCTCCTCTCGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQCIATV*SPLGDR
Trigger: TCTGTCACCGAGAGGAGATCACACAGTTGCAATGCA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTACCCTCTTGACCACCTaGCAATCCTGGCTACACATC +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATTLLTT*QSWLHI
Trigger: GATGTGTAGCCAGGATTGTCAGGTGGTCAAGAGGGT...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTAGGCCTGGGTACCACTaGAGTTGGAGTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSRPGYH*SWSWWR
Trigger: CCTCCACCAACTCCAACTTCAGTGGTACCCAGGCCT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTGGGTCAGGCTTGGGCTaGTGCTATCATCCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSGSGLG*CYHPCS
Trigger: GCTACAGGGATGATAGCATCAGCCCAAGCCTGACCC...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCAGGTGTTGAGCTGGTaGCAATCTCACTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATQVLSW*QSHLCC
Trigger: GCAGCACAAGTGAGATTGTCACCAGCTCAACACCTG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR TCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGCTGGTTTGGGGTGTTaGTGGGGTGCTGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWAGLGC*WGAGLS
Trigger: GGAAAGGCCAGCACCCCATCAACACCCCAAACCAGC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR GCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACGGAAGTTGCCCCATGTaGTGCACACCCGCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHGSCPM*CTPAWY
Trigger: ATACCAGGCGGGTGTGCAGCACATGGGGCAACTTCC...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGCTACACTCCAGGTGCTaGTGCAGCTCGGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWLHSRC*CSSGRG
Trigger: GCCTCTTCCCGAGCTGCAGCAGCACCTGGAGTGTAG...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGTACTGCTGTATGGGTaGTCAGTTGAGGTAACAGGG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQVLLYG*SVEVTG
Trigger: CCCTGTTACCTCAACTGAGCACCCATACAGCAGTAC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGCTTCTCCAGGGAATaGACACGCCTTGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARGFSRE*TRLGLH
Trigger: GTGCAGCCCAAGGCGTGTGCATTCCCTGGAGAAGCC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGCTTCTCCAGGGAATaGACACGCCTTGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEGFSRE*TRLGLH
Trigger: GTGCAGCCCAAGGCGTGTGCATTCCCTGGAGAAGCC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCTTGGCAGTAGGAGATaGTCACTGGGCCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHLGSRR*SLGPQS
Trigger: GCTCTGAGGGCCCAGTGAGCATCTCCTACTGCCAAG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGGTCACCCTATTGAGTaGGGTACCAACATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATGHPIE*GTNMPL
Trigger: CAAGGGCATGTTGGTACCCCACTCAATAGGGTGACC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTTGAGGGGACATGTCTaGGAGCAGAGGTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPELRGHV*EQRLGP
Trigger: GGGCCCCAACCTCTGCTCCCAGACATGTCCCCTCAA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTACAGGCAGGCACACTaGGACACAGGAACACAGCCC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSYRQAH*DTGTQP
Trigger: GGGCTGTGTTCCTGTGTCCCAGTGTGCCTGCCTGTA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAACGGTGGCGTGGCACTaGGAAAATGGACCACTGGCG +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARTVAWH*ENGPLA
Trigger: CGCCAGTGGTCCATTTTCCCAGTGCCACGCCACCGT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTCTCGATGGTACCATTaGCCCTGCAGTGTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATSRWYH*PCSVQR
Trigger: TCTCTGCACACTGCAGGGCCAATGGTACCATCGAGA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGGCTGGAATGTGTGCTaGAGGGTTGCATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATGWNVC*RVALRS
Trigger: TGACCTCAATGCAACCCTCCAGCACACATTCCAGCC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGCCCGGCAACCTGATGTaGTTACGGCGGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWPGNLM*LRRRLK
Trigger: CTTCAGCCTCCGCCGTAACCACATCAGGTTGCCGGG...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGACAGACCTGGGGTGTaGGTAGAAGAACCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVDRPGV*VEEPEV
Trigger: TACCTCAGGTTCTTCTACCCACACCCCAGGTCTGTC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCACAGACGATATGGCTaGAGTTGGCTCTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATHRRYG*SWLWCW
Trigger: CCAACACCAGAGCCAACTCCAGCCATATCGTCTGTG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTGTTGCCCTCACAGGTaGCTTGGGAACAATTCGGCA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATCCPHR*LGNNSA
Trigger: TGCCGAATTGTTCCCAAGCCACCTGTGAGGGCAACA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTAGCACCACACGGTCCTaGTGGTACTCCACAATGATG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVSTTRS*WYSTMM
Trigger: CATCATTGTGGAGTACCACCAGGACCGTGTGGTGCT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACGTGCAAGTGCCGCACTaGCCCTCTGTGTTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHVQVPH*PSVLLA
Trigger: TGCCAACAACACAGAGGGCCAGTGCGGCACTTGCAC...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCAGGTGTTGTTGGTTTaGCTTCTCCAGGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQQVLLV*LLQGMH
Trigger: GTGCATTCCCTGGAGAAGCCAAACCAACAACACCTG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTTGAAGGGTCAGGCTTaGGCTGATGCTATCATCCCT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQLKGQA*ADAIIP
Trigger: AGGGATGATAGCATCAGCCCAAGCCTGACCCTTCAA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTAAGTGTCGTGCTGTCTaGACAGAAGCAGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATKCRAV*TEAALC
Trigger: ACAGAGGGCTGCTTCTGTCCAGACAGCACGACACTT...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCACAAAGCCAGGCTCTaGACAGGTGGGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHHKARL*TGGLRT
Trigger: TGTCCTCAGCCCACCTGTCCAGAGCCTGGCTTTGTG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGCCACAGCACTGCCCTaGCATGGCCTGGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWATALP*HGLVLR
Trigger: TCTGAGTACCAGGCCATGCCAGGGCAGTGCTGTGGC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCCACAGCACTGCCCTaGCATGGCCTGGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARATALP*HGLVLR
Trigger: TCTGAGTACCAGGCCATGCCAGGGCAGTGCTGTGGC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCCTCCAGGGAGTACATaGAGATGCTGTCCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHPPGST*RCCPRS
Trigger: ACTGCGGGGACAGCATCTCCATGTACTCCCTGGAGG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGAGGTTTGCAGCTCCTaGCAACACTCACATGTGTGC +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVEVCSS*QHSHVC
Trigger: GCACACATGTGAGTGTTGCCAGGAGCTGCAAACCTC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTGCCCTTTCCTGTATTaGGTGAGCTGGTTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQCPFLY*VSWFGL
Trigger: CAACCCAAACCAGCTCACCCAATACAGGAAAGGGCA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGGAACACAGCCCATCTaGTTAATGTCATCAAGCACC +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQGTQPI*LMSSST
Trigger: GGTGCTTGATGACATTAATCAGATGGGCTGTGTTCC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTGGGCTGGCAGGTGCTaGTATGGTATTGATAGGTCA +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVWAGRC*YGIDRS
Trigger: TGACCTATCAATACCATATCAGCACCTGCCAGCCCA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGGGATGTGTGGTAACTaGAGCTGTGGAACAGTTGTT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQGMCGN*SCGTVV
Trigger: AACAACTGTTCCACAGCTTCAGTTACCACACATCCC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCGTGCTGACTCCATGTaGGGTGGGATGTGTGGTAAC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSRADSM*GGMCGN
Trigger: GTTACCACACATCCCACCTCACATGGAGTCAGCACG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTATCAGGGCACGTGAATaGGCAGGTGTTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATIRARE*AGVVGL
Trigger: CAAACCAACAACACCTGCTCATTCACGTGCCCTGAT...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTATCAGGGCACGTGAATaGGCAGGTGTTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVIRARE*AGVVGL
Trigger: CAAACCAACAACACCTGCTCATTCACGTGCCCTGAT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGTCAGGCTTGGGCTaGTGCTATCATCCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARGSGLG*CYHPCS
Trigger: GCTACAGGGATGATAGCATCAGCCCAAGCCTGACCC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGATCTGGACAGGTGGGCTaGGGACAGGCCTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARSGQVG*GQAFFW
Trigger: CCAAAAGAAGGCCTGTCCTCAGCCCACCTGTCCAGA...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCTTGAACTCTTGTTCTaGGGACTCTGCATGGCTTGT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQLELLF*GLCMAC
Trigger: ACAAGCCATGCAGAGTCCTCAGAACAAGAGTTCAAG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGGCATCCCCACAGTGTaGAGAGAACACATAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATGIPTV*REHIVA
Trigger: TGCAACTATGTGTTCTCTGCACACTGTGGGGATGCC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTCACAGACCTGGGAATaGTGGGGGTTGGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWSQTWE*WGLEQV
Trigger: CACCTGCTCCAACCCCCAGCATTCCCAGGTCTGTGA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTGGTACCATTGGCCCTaGAGTGTGCAGAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSWYHWP*SVQRCS
Trigger: GCTGCATCTCTGCACACTGCAGGGCCAATGGTACCA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGTACTGCTGTATGGGTaGTCAGTTGAGGTAACAGGG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATVLLYG*SVEVTG
Trigger: CCCTGTTACCTCAACTGAGCACCCATACAGCAGTAC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACTGCAGGTCACATTCTaGCCCAGCTCCTCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARLQVTF*PSSSSG
Trigger: ACCACTGGAGGAGCTGGGGCAGAATGTGACCTGCAG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGCACCAGCACGTATGTaGAGTTATCCAGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQAPARM*SYPGKC
Trigger: ACACTTTCCTGGATAACTGCACATACGTGCTGGTGC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGACGGGCACGATCTGCTaGACCAGCACGTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWTGTIC*TSTYVQ
Trigger: CTGCACATACGTGCTGGTGCAGCAGATCGTGCCCGT...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACGGGCACGATCTGCTaGACCAGCACGTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPETGTIC*TSTYVQ
Trigger: CTGCACATACGTGCTGGTGCAGCAGATCGTGCCCGT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGTGACAATGCCATTCTaGTGGAAGCCAGGACTGACT +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVVTMPF*WKPGLT
Trigger: AGTCAGTCCTGGCTTCCAGCAGAATGGCATTGTCAC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGGGGTGTTGAGGGGGTaGTGCCCTTTCCTGTATTGG +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWGVLRG*CPFLYW
Trigger: CCAATACAGGAAAGGGCAGCACCCCCTCAACACCCC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTACAGGCAGGCACACTaGGACACAGGAACACAGCCC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEYRQAH*DTGTQP
Trigger: GGGCTGTGTTCCTGTGTCCCAGTGTGCCTGCCTGTA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGCACGGCAGGTGGGCTaGCAGGTGCTGATATGGTAT +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWARQVG*QVLIWY
Trigger: ATACCATATCAGCACCTGCCAGCCCACCTGCCGTGC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACACACGAAAGGCATCCTaGGAGCTGCCATTCCCACCA +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHTRKAS*ELPFPP
Trigger: TGGTGGGAATGGCAGCTCCCAGGATGCCTTTCGTGT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTCACTGACCACGGACTaGCTGCGTGTGGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSSLTTD*LRVVKS
Trigger: TGACTTCACCACACGCAGCCAGTCCGTGGTCAGTGA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGACATCCGGGCAGGATaGAGACAACTTCCAGCTATT +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATDIRAG*RQLPAI
Trigger: AATAGCTGGAAGTTGTCTCCATCCTGCCCGGATGTC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACTGCCCTCATCAAAGATaGGGGCTGTTGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHCPHQR*GLLVGT
Trigger: AGTGCCCACCAACAGCCCCCATCTTTGATGAGGGCA...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCAGAGGAAGGCATGGTaGACCCTGAGGTTGAGATGG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSQRKAW*TLRLRW
Trigger: CCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGGAGAGGAATACACATaGGTGGTCCAGTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATGEEYT*VVQLVS
Trigger: AGAGACCAACTGGACCACCCATGTGTATTCCTCTCC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGAAGTCTGATCAGTCCTaGGGCAGTCTTCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQKSDQS*GSLQEC
Trigger: ACATTCCTGAAGACTGCCCCAGGACTGATCAGACTT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGACCATTGGCACAAGATaGTTCATTCAGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQTIGTR*FIQLWA
Trigger: TGCCCAGAGCTGAATGAACCATCTTGTGCCAATGGT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCACAATGATGGACTGTaGGCAGGAGACGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHHNDGL*AGDAVS
Trigger: GGAGACAGCGTCTCCTGCCCACAGTCCATCATTGTG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTGCAAGTGCCGCACTaGCCCTCTGTGTTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARVQVPH*PSVLLA
Trigger: TGCCAACAACACAGAGGGCCAGTGCGGCACTTGCAC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTTGGGCACCTTCCAGTaGAGGGACATCTCAGAACAA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATLGTFQ*RDISEQ
Trigger: TTGTTCTGAGATGTCCCTCCACTGGAAGGTGCCCAA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGATGGGCCACAAGGCTaGTATACTTGGTTATCAGGG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATDGPQG*YTWLSG
Trigger: CCCTGATAACCAAGTATACCAGCCTTGTGGCCCATC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCACAAAGCCAGGCTCTaGACAGGTGGGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEHKARL*TGGLRT
Trigger: TGTCCTCAGCCCACCTGTCCAGAGCCTGGCTTTGTG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGAGCTGGTTTGGGGCATaGAAGTACTGCTTGCTACAT +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQSWFGA*KYCLLH
Trigger: ATGTAGCAAGCAGTACTTCCATGCCCCAAACCAGCT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTGGTCTTTCCTGTATTaGGTGAGCTGGTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVWSFLY*VSWFGA
Trigger: TGCCCCAAACCAGCTCACCCAATACAGGAAAGACCA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTTGGGTGAGCTGGTTTaGGTTGTAGAGATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATLGELV*VVEMVL
Trigger: CAGCACCATCTCTACAACCCAAACCAGCTCACCCAA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR TCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTGGCGTAGCTGGATATTaGAGTCCTCATAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSGVAGY*SPHRHP
Trigger: GGGATGCCTATGAGGACTTCAATATCCAGCTACGCC...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGGCCGTCCATCTTCTaGAGGTTCCCAAACTCAAGG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEGPSIF*RFPNSR
Trigger: CCTTGAGTTTGGGAACCTTCAGAAGATGGACGGCCC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGAACACAGCCCATCTaGTTAATGTCATCAAGCACC +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVGTQPI*LMSSST
Trigger: GGTGCTTGATGACATTAATCAGATGGGCTGTGTTCC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTACAGCACTGGACTTTaGTCTGGTAGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQYSTGL*SGSCHR
Trigger: TCTGTGACAACTACCAGATCAAAGTCCAGTGCTGTA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCAGTCTTCAGGAATGTaGCAGCACAGCAGTCGCACC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEQSSGM*QHSSRT
Trigger: GGTGCGACTGCTGTGCTGTCACATTCCTGAAGACTG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTACCCTCTTGACCACCTaGCAATCCTGGCTACACATC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSTLLTT*QSWLHI
Trigger: GATGTGTAGCCAGGATTGTCAGGTGGTCAAGAGGGT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTGGGCTCAAGGAGATaGCATTGTTGCCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARVGSRR*HCCPHR
Trigger: CCTGTGAGGGCAACAATGTCATCTCCTTGAGCCCAC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGAGTTGCAGGCACAGCTaGACTGGGGACAACATTGGC +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWSCRHS*TGDNIG
Trigger: GCCAATGTTGTCCCCAGTTCAGCTGTGCCTGCAACT...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGAGTTGCAGGCACAGCTaGACTGGGGACAACATTGGC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPESCRHS*TGDNIG
Trigger: GCCAATGTTGTCCCCAGTTCAGCTGTGCCTGCAACT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACTTCACAGCCCTTCTaGCTGCTGCAGTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPETSQPF*LLQFWV
Trigger: GACCCAGAACTGCAGCAGTCAGAAGGGCTGTGAAGT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTAGTTTTGCTGACGGATaGTCTGCTGTCTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATSFADG*SAVFGA
Trigger: TGCACCAAAGACAGCAGATCATCCGTCAGCAAAACT...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACAGAGTCACATTCCTCTaGGAGGTTTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHRVTFL*EVCSSW
Trigger: CCAGGAGCTGCAAACCTCTCAGAGGAATGTGACTCT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCTTGAACTCTTGTTCTaGGGACTCTGCATGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATLELLF*GLCMAC
Trigger: ACAAGCCATGCAGAGTCCTCAGAACAAGAGTTCAAG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCCACATTCCTGGTGCTaGATGTTGAGGGGACATGTC +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHPHSWC*MLRGHV
Trigger: GACATGTCCCCTCAACATGCAGCACCAGGAATGTGG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGTTGAAGAAAGCAGCTaGTGTGCCCTCCACAACCCC +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWVEESS*CALHNP
Trigger: GGGGTTGTGGAGGGCACAGCAGCTGCTTTCTTCAAC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTCCTGTTCTCACAGGTaGAGTTGTTGCATCCCACTT +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATSCSHR*SCCIPL
Trigger: AAGTGGGATGCAACAACTGCACCTGTGAGAACAGGA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACTGCAGTGTGCAGAGATaGAGCCTCCTATGCCATCTG +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHCSVQR*SLLCHL
Trigger: CAGATGGCATAGGAGGCTGCATCTCTGCACACTGCA...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTGGTACCATTGGCCCTaGAGTGTGCAGAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWWYHWP*SVQRCS
Trigger: GCTGCATCTCTGCACACTGCAGGGCCAATGGTACCA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGCACCAGCACGTATGTaGAGTTATCCAGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVAPARM*SYPGKC
Trigger: ACACTTTCCTGGATAACTGCACATACGTGCTGGTGC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTGTCATTGGTGCAAGTaGCGCACTGGCCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWCHWCK*RTGPLC
Trigger: ACACAGAGGGCCAGTGCGGCACTTGCACCAATGACA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACTGGCTTCCTTACAGATaGAGTCCTGGCAGTCGATGC +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHWLPYR*SPGSRC
Trigger: GCATCGACTGCCAGGACTGCATCTGTAAGGAAGCCA...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTGGCTTCCTTACAGATaGAGTCCTGGCAGTCGATGC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSWLPYR*SPGSRC
Trigger: GCATCGACTGCCAGGACTGCATCTGTAAGGAAGCCA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATCGGAAAGGGGATTaGTGGAAACCTCACACAGGC +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHHRKGD*WKPHTG
Trigger: GCCTGTGTGAGGTTTCCAGCAATCCCCTTTCCGATG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTGCACCGTACATTTCTaGTGGTTAGGTAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVCTVHF*WLGKGQ
Trigger: CTGTCCCTTACCTAACCAGCAGAAATGTACGGTGCA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACTCGCTGACCCTGAATaGCAACTGCTGGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARLADPE*QLLAMF
Trigger: GAACATGGCCAGCAGTTGGCATTCAGGGTCAGCGAG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGGTGAGCCACATTCCTaGTGCTGCATGTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWGEPHS*CCMLRG
Trigger: TCCCCTCAACATGCAGCACCAGGAATGTGGCTCACC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGTGAGCCACATTCCTaGTGCTGCATGTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEGEPHS*CCMLRG
Trigger: TCCCCTCAACATGCAGCACCAGGAATGTGGCTCACC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCAAGTTAGTGCTCCTTaGGTGCAGGTGCAAATGGCC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSQVSAP*VQVQMA
Trigger: GGCCATTTGCACCTGCACCCAAGGAGCACTAACTTG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGCATACACAGCACAGGTaGCCAGGCAAGGCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWHTQHR*PGKACL
Trigger: CAGACAAGCCTTGCCTGGCCACCTGTGCTGTGTATG...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTGCCCCACATCCTTCTaGACCACCTCCATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPECPTSF*TTSILL
Trigger: CAGCAAGATGGAGGTGGTCCAGAAGGATGTGGGGCA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGATCACTGACCACGGACTaGCTGCGTGTGGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARSLTTD*LRVVKS
Trigger: TGACTTCACCACACGCAGCCAGTCCGTGGTCAGTGA...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGCAGTGGGCAGATGTCTaGTGTCCTCCAGGACACACA +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWQWADV*CPPGHT
Trigger: TGTGTGTCCTGGAGGACACCAGACATCTGCCCACTG...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACAGTGGGCAGATGTCTaGTGTCCTCCAGGACACACA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARQWADV*CPPGHT
Trigger: TGTGTGTCCTGGAGGACACCAGACATCTGCCCACTG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACAAAGATGGGGGCTGTTaGTGGGCACTTGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHKDGGC*WALGIA
Trigger: TGCTATCCCAAGTGCCCACCAACAGCCCCCATCTTT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACGGCTGGAATGTGTGCTaGAGGGTTGCATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHGWNVC*RVALRS
Trigger: TGACCTCAATGCAACCCTCCAGCACACATTCCAGCC...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTAGTTGGCTCTGGTGTTaGGCTAGTGATGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSSWLWC*ASDGQS
Trigger: ACTCTGCCCATCACTAGCCCAACACCAGAGCCAACT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGCCTCCAGTGGTGTGTTaGGAAAGAACTGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWPPVVC*ERTEPC
Trigger: GCAGGGCTCAGTTCTTTCCCAACACACCACTGGAGG...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACCCCAGCTCCTCCAGTaGTGTGTTGGGAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARPQLLQ*CVGKEL
Trigger: CAGTTCTTTCCCAACACACCACTGGAGGAGCTGGGG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCAGTTGCACTGTAGCTaGCAGTGGGTGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEQLHCS*QWVVTG
Trigger: ACCAGTGACCACCCACTGCCAGCTACAGTGCAACTG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTAAGTCTGATCAGTCCTaGGGCAGTCTTCAGGAATGT +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVKSDQS*GSLQEC
Trigger: ACATTCCTGAAGACTGCCCCAGGACTGATCAGACTT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTGTTGCCCTCACAGGTaGCTTGGGAACAATTCGGCA +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSCCPHR*LGNNSA
Trigger: TGCCGAATTGTTCCCAAGCCACCTGTGAGGGCAACA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTGGTTCATTCAGCTCTaGGCACTGGCGTGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEWFIQL*ALAWAQ
Trigger: TTGAGCCCACGCCAGTGCCCAGAGCTGAATGAACCA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTGGTTCATTCAGCTCTaGGCACTGGCGTGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWWFIQL*ALAWAQ
Trigger: TTGAGCCCACGCCAGTGCCCAGAGCTGAATGAACCA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCACAATGATGGACTGTaGGCAGGAGACGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEHNDGL*AGDAVS
Trigger: GGAGACAGCGTCTCCTGCCCACAGTCCATCATTGTG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACAGCACCACACGGTCCTaGTGGTACTCCACAATGATG +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHSTTRS*WYSTMM
Trigger: CATCATTGTGGAGTACCACCAGGACCGTGTGGTGCT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTATGAGCAGGTGTTGTTaGTTTGGCTTCTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVMSRCC*FGFSRE
Trigger: TTCCCTGGAGAAGCCAAACCAACAACACCTGCTCAT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAAGCAGTAGTGAGGGTTaGATGGGCCACAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARSSSEG*MGHKAG
Trigger: ACCAGCCTTGTGGCCCATCCAACCCTCACTACTGCT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTATCTCTCACATAGGCTaGAGGAGACCACGTCACCAG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSISHIG*RRPRHQ
Trigger: CTGGTGACGTGGTCTCCTCCAGCCTATGTGAGAGAT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGTAGGAGATGCTCACTaGGCCCTCAGAGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEVGDAH*ALRAAV
Trigger: AACTGCAGCTCTGAGGGCCCAGTGAGCATCTCCTAC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGTAGGAGATGCTCACTaGGCCCTCAGAGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWVGDAH*ALRAAV
Trigger: AACTGCAGCTCTGAGGGCCCAGTGAGCATCTCCTAC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTGTGCTCTACCTTGTTaGCCTCCAGGGAGTACATGG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSCALPC*PPGSTW
Trigger: CCATGTACTCCCTGGAGGCCAACAAGGTAGAGCACA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGCGTAGCTGGATATTaGAGTCCTCATAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARGVAGY*SPHRHP
Trigger: GGGATGCCTATGAGGACTTCAATATCCAGCTACGCC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCATCAAGCTTCATGGTaGCCCTACTCAGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEHQASW*PYSEWW
Trigger: CCACCACTCTGAGTAGGGTCACCATGAAGCTTGATG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACATTTTGGACTGCCGTTaGAGTCTCCACAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHILDCR*SLHRDH
Trigger: GTGGTCTCTGTGGAGACTTCAACGGCAGTCCAAAAT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTGCTCAACCAGCACAGTaGAGGCATTACTGTCACAAG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSAQPAQ*RHYCHK
Trigger: CTTGTGACAGTAATGCCTTCACTGTGCTGGTTGAGC...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACGCTCAACCAGCACAGTaGAGGCATTACTGTCACAAG +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHAQPAQ*RHYCHK
Trigger: CTTGTGACAGTAATGCCTTCACTGTGCTGGTTGAGC...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTTGGGACAAGCCGCCTaGGTCTTGAAGGTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWLGQAA*VLKVLK
Trigger: CTTCAACACCTTCAAGACTCAGGCGGCTTGTCCCAA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACTGGGCTGGCAGGTGCTaGTATGGTATTGATAGGTCA +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHWAGRC*YGIDRS
Trigger: TGACCTATCAATACCATATCAGCACCTGCCAGCCCA...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACTCCTGTTTGCACTCATaGGTTGTCTCAGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHSCLHS*VVSEEG
Trigger: GCCTTCCTCTGAGACAACTCATGAGTGCAAACAGGA...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR TCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTGTGTCTATGGTTGCTaGGTGACTACTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATCVYGC*VTTGVF
Trigger: AAAGACACCAGTAGTCACTCAGCAACCATAGACACA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACTGCATTGCAACTGTGTaGTCTCCTCTCGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHCIATV*SPLGDR
Trigger: TCTGTCACCGAGAGGAGATCACACAGTTGCAATGCA...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTCACACTTCACCACCTaGCCCAGATCCTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWSHFTT*PRSSIS
Trigger: AGAGATGGAGGATCTGGGTCAGGTGGTGAAGTGTGA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGAGAAGATGAGACCTaGAAACATGACCCGGACACC +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARGEDET*KHDPDT
Trigger: GGTGTCCGGGTCATGTTTTCAGGTCTCATCTTCTCC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAAGAGTCACATTCCTCTaGGAGGTTTGCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARRVTFL*EVCSSW
Trigger: CCAGGAGCTGCAAACCTCTCAGAGGAATGTGACTCT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCAGAGAACACATAGTTaGAGAGACCAGGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATQRTHS*RDQGSR
Trigger: TCTACTTCCCTGGTCTCTGCAACTATGTGTTCTCTG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGCCACATTCCTGGTGCTaGATGTTGAGGGGACATGTC +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWPHSWC*MLRGHV
Trigger: GACATGTCCCCTCAACATGCAGCACCAGGAATGTGG...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTAGCTGGATCTCAAGCTaGAAACCCAGGTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSSWISS*KPRLVS
Trigger: TGAGACCAACCTGGGTTTGCAGCTTGAGATCCAGCT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTAATCATCTAAGAAGGTaGCTTTGGGGCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSNHLRR*LWGRCS
Trigger: GCTGCACCTGCCCCAAAGGCACCTTCTTAGATGATT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCACAGGTGCAGTTGTTaGATCCCACTTGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHHRCSC*IPLGWS
Trigger: AGACCATCCAAGTGGGATGCAACAACTGCACCTGTG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTGGCTTGTCTGTGCATTaGCACATCCTGTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSGLSVH*HILFSQ
Trigger: CTGTGAGAACAGGATGTGGCAATGCACAGACAAGCC...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGATGCAGTGTGCAGAGATaGAGCCTCCTATGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARCSVQR*SLLCHL
Trigger: CAGATGGCATAGGAGGCTGCATCTCTGCACACTGCA...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGATTGGCCCTGCAGTGTaGAGAGATGCAGCCTCCTAT +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEIGPAV*RDAASY
Trigger: ATAGGAGGCTGCATCTCTGCACACTGCAGGGCCAAT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTAATCTCCACTGTTTCTaGCAGACCCAGGGTAACTGC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSNLHCF*QTQGNC
Trigger: GCAGTTACCCTGGGTCTGGCAGAAACAGTGGAGATT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCGCTCCTCTCAATGTTaGTATAGGTTTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHRSSQC*YRFPGP
Trigger: GGGACCTGGAAACCTATAGCAACATTGAGAGGAGCG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCATCGGAAAGGGGATTaGTGGAAACCTCACACAGGC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEHRKGD*WKPHTG
Trigger: GCCTGTGTGAGGTTTCCAGCAATCCCCTTTCCGATG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGGTCACCCTATTGAGTaGGGTACCAACATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWGHPIE*GTNMPL
Trigger: CAAGGGCATGTTGGTACCCCACTCAATAGGGTGACC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGTGGCACTGGGAAAATaGACCACTGGCGTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEVALGK*TTGVSQ
Trigger: CTGACTAACGCCAGTGGTCCATTTTCCCAGTGCCAC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACTAAGAAGGTGCCTTTaGGGCAGGTGCAGCCATCTA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARLRRCL*GRCSHL
Trigger: TAGATGGCTGCACCTGCCCCAAAGGCACCTTCTTAG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCGCCATTGGGAACTGTaGATCCCTTGTAGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHRHWEL*IPCSSK
Trigger: CTTGCTACTACAAGGGATCCACAGTTCCCAATGGCG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCAAGTTAGTGCTCCTTaGGTGCAGGTGCAAATGGCC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEQVSAP*VQVQMA
Trigger: GGCCATTTGCACCTGCACCCAAGGAGCACTAACTTG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGAAAGATGGGGGCTGTTaGTGGGCACTTGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEKDGGC*WALGIA
Trigger: TGCTATCCCAAGTGCCCACCAACAGCCCCCATCTTT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGATCTCGATGGTACCATTaGCCCTGCAGTGTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARSRWYH*PCSVQR
Trigger: TCTCTGCACACTGCAGGGCCAATGGTACCATCGAGA...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACAGACCTGGGGTGTaGGTAGAAGAACCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARDRPGV*VEEPEV
Trigger: TACCTCAGGTTCTTCTACCCACACCCCAGGTCTGTC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACACAGACGATATGGCTaGAGTTGGCTCTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARHRRYG*SWLWCW
Trigger: CCAACACCAGAGCCAACTCCAGCCATATCGTCTGTG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACACCCTGAGGTTGAGATaGACACAGACGATATGGCTG +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHTLRLR*TQTIWL
Trigger: CAGCCATATCGTCTGTGTCCATCTCAACCTCAGGGT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGAACAATTCGGCATTaGCCAGGTCTCTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEGTIRH*PGLSSQ
Trigger: CTGAGAGGAGAGACCTGGCCAATGCCGAATTGTTCC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACTTGGGCACCTTCCAGTaGAGGGACATCTCAGAACAA +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHLGTFQ*RDISEQ
Trigger: TTGTTCTGAGATGTCCCTCCACTGGAAGGTGCCCAA...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCAGGTGTTGTTGGTTTaGCTTCTCCAGGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSQVLLV*LLQGMH
Trigger: GTGCATTCCCTGGAGAAGCCAAACCAACAACACCTG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTTGAAGGGTCAGGCTTaGGCTGATGCTATCATCCCT +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSLKGQA*ADAIIP
Trigger: AGGGATGATAGCATCAGCCCAAGCCTGACCCTTCAA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGATCTCTCACATAGGCTaGAGGAGACCACGTCACCAG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEISHIG*RRPRHQ
Trigger: CTGGTGACGTGGTCTCCTCCAGCCTATGTGAGAGAT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGAGGTTTGCAGCTCCTaGCAACACTCACATGTGTGC +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGAREVCSS*QHSHVC
Trigger: GCACACATGTGAGTGTTGCCAGGAGCTGCAAACCTC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACTCTGAGGACTCTGCATaGCTTGTGTCCCCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHSEDSA*LVSPKA
Trigger: TGCTTTAGGGGACACAAGCCATGCAGAGTCCTCAGA...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAAACGATGAAGAAGGTTaGAGGCCGGAAGAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARNDEEG*RPEEGS
Trigger: GCTACCTTCTTCCGGCCTTCAACCTTCTTCATCGTT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTAGTAGTAGTTGTCAATaGGCACACGGAAGTATCCAA +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVSSSCQ*AHGSIQ
Trigger: TTGGATACTTCCGTGTGCTCATTGACAACTACTACT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGCATCCCCACAGTGTaGAGAGAACACATAGTTGCA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARGIPTV*REHIVA
Trigger: TGCAACTATGTGTTCTCTGCACACTGTGGGGATGCC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTGCACGTGTCATACATaGAGTTCGAGAAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSCTCHT*SSRRRC
Trigger: GCACCTTCTTCTCGAACTGCATGTATGACACGTGCA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAAATCATCTAAGAAGGTaGCTTTGGGGCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARNHLRR*LWGRCS
Trigger: GCTGCACCTGCCCCAAAGGCACCTTCTTAGATGATT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACACAGGTGCAGTTGTTaGATCCCACTTGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARHRCSC*IPLGWS
Trigger: AGACCATCCAAGTGGGATGCAACAACTGCACCTGTG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGCTTGTCTGTGCATTaGCACATCCTGTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARGLSVH*HILFSQ
Trigger: CTGTGAGAACAGGATGTGGCAATGCACAGACAAGCC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACATACACACTGCATTGTaGCCTCATCAAAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHIHTAL*PHQRWG
Trigger: CCCCCATCTTTGATGAGGGCACAATGCAGTGTGTAT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGAGCACGGCACTCTACTaGTTTTGGCACTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPESTALY*FWHLAD
Trigger: ATCTGCCAAGTGCCAAAAGCAGTAGAGTGCCGTGCT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGAGCACGGCACTCTACTaGTTTTGGCACTTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWSTALY*FWHLAD
Trigger: ATCTGCCAAGTGCCAAAAGCAGTAGAGTGCCGTGCT...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAAATCTCCACTGTTTCTaGCAGACCCAGGGTAACTGC +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARNLHCF*QTQGNC
Trigger: GCAGTTACCCTGGGTCTGGCAGAAACAGTGGAGATT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACGAAAGAACTGAGCCCTaGACTCAACATTTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHERTEP*TQHFVA
Trigger: AGCCACGAAATGTTGAGTGCAGGGCTCAGTTCTTTC...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGCGCTCCTCTCAATGTTaGTATAGGTTTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWRSSQC*YRFPGP
Trigger: GGGACCTGGAAACCTATAGCAACATTGAGAGGAGCG...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTGACAATGCCATTCTaGTGGAAGCCAGGACTGACT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARVTMPF*WKPGLT
Trigger: AGTCAGTCCTGGCTTCCAGCAGAATGGCATTGTCAC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAACCCTGAATGCCAACTaGTGGCCATGTTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARTLNAN*WPCSSL
Trigger: AAGTGAGGAACATGGCCAGCAGTTGGCATTCAGGGT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCCTGAATGCCAACTaGTGGCCATGTTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPETLNAN*WPCSSL
Trigger: AAGTGAGGAACATGGCCAGCAGTTGGCATTCAGGGT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGTACTGCTTGCTACATaGATGGAAGTGGTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEVLLAT*MEVVPG
Trigger: ACCTGGCACCACTTCCATGCATGTAGCAAGCAGTAC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTATTGGCTGTAGACACTaGCAACTGGGTGTAGATCTG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSIGCRH*QLGVDL
Trigger: CAGATCTACACCCAGTTGCCAGTGTCTACAGCCAAT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACACCCCACTGATAGTCTaGAAGTCATCAGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHTPLIV*KSSACI
Trigger: TATGCAGGCTGATGACTTCCAGACTATCAGTGGGGT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTGGGATGAAGCTGACATaGCAGGTGACATCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSGMKLT*QVTSFS
Trigger: TGAGAAAGATGTCACCTGCCATGTCAGCTTCATCCC...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACGCCATTGGGAACTGTaGATCCCTTGTAGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARRHWEL*IPCSSK
Trigger: CTTGCTACTACAAGGGATCCACAGTTCCCAATGGCG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGACATCCGGGCAGGATaGAGACAACTTCCAGCTATT +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWDIRAG*RQLPAI
Trigger: AATAGCTGGAAGTTGTCTCCATCCTGCCCGGATGTC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGTAGTCACAGAACAGTaGGCAGATGTCTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWVVTEQ*ADVWCP
Trigger: AGGACACCAGACATCTGCCCACTGTTCTGTGACTAC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGAGGATGATATCACATaGGTCGTCTGGGAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWEDDIT*VVWEVG
Trigger: TCCAACCTCCCAGACGACCCATGTGATATCATCCTC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGAGGATGATATCACATaGGTCGTCTGGGAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGAREDDIT*VVWEVG
Trigger: TCCAACCTCCCAGACGACCCATGTGATATCATCCTC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGAGAGGAATACACATaGGTGGTCCAGTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEGEEYT*VVQLVS
Trigger: AGAGACCAACTGGACCACCCATGTGTATTCCTCTCC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTTGCTGAGTGACTACTaGTGTCTTTTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSLLSDY*CLLWER
Trigger: CCTCTCCCACAAAAGACACCAGTAGTCACTCAGCAA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCAGTGTCAAACCACTTaGTCCAGTTGCACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSQCQTT*SSCTVA
Trigger: AGCTACAGTGCAACTGGACCAAGTGGTTTGACACTG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTACCATTGGCACAAGATaGTTCATTCAGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSTIGTR*FIQLWA
Trigger: TGCCCAGAGCTGAATGAACCATCTTGTGCCAATGGT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGATGGGCCACAAGGCTaGTATACTTGGTTATCAGGG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEDGPQG*YTWLSG
Trigger: CCCTGATAACCAAGTATACCAGCCTTGTGGCCCATC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGATCTGAGGACTCTGCATaGCTTGTGTCCCCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARSEDSA*LVSPKA
Trigger: TGCTTTAGGGGACACAAGCCATGCAGAGTCCTCAGA...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACTGTATTGGGTGAGCTaGTTTGGGGCATGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARLYWVS*FGAWKY
Trigger: GTACTTCCATGCCCCAAACCAGCTCACCCAATACAG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR TCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTACAGCACTGGACTTTaGTCTGGTAGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSYSTGL*SGSCHR
Trigger: TCTGTGACAACTACCAGATCAAAGTCCAGTGCTGTA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGATGTGTGGTAACTaGAGCTGTGGAACAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARGMCGN*SCGTVV
Trigger: AACAACTGTTCCACAGCTTCAGTTACCACACATCCC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTCATTGTCACGACCATaGGTACATCTTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATSLSRP*VHLGIS
Trigger: AGAAATTCCAAGATGTACTCATGGTCGTGACAATGA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGAGTTTTGCTGACGGATaGTCTGCTGTCTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWSFADG*SAVFGA
Trigger: TGCACCAAAGACAGCAGATCATCCGTCAGCAAAACT...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCACTTTCCTTGGACTTaGACTCTTGTTCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHHFPWT*TLVLRT
Trigger: AGTCCTCAGAACAAGAGTTCAAGTCCAAGGAAAGTG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGATCCTGTTTGCACTCATaGGTTGTTTCAGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARSCLHS*VVSEEG
Trigger: GCCTTCCTCTGAAACAACTCATGAGTGCAAACAGGA...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTCCTGTTTGCACTCATaGGTTGTTTCAGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPESCLHS*VVSEEG
Trigger: GCCTTCCTCTGAAACAACTCATGAGTGCAAACAGGA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCAGAGAACACATAGTTaGAGAGACCAGGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSQRTHS*RDQGSR
Trigger: TCTACTTCCCTGGTCTCTGCAACTATGTGTTCTCTG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTGCACGTGTCATACATaGAGTTCGAGAAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPECTCHT*SSRRRC
Trigger: GCACCTTCTTCTCGAACTGCATGTATGACACGTGCA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTCCTGTTCTCACAGGTaGAGTTGTTGCATCCCACTT +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPESCSHR*SCCIPL
Trigger: AAGTGGGATGCAACAACTGCACCTGTGAGAACAGGA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGATACACACTGCATTGTaGCCTCATCAAAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEIHTAL*PHQRWG
Trigger: CCCCCATCTTTGATGAGGGCACAATGCAGTGTGTAT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGAAAGAACTGAGCCCTaGACTCAACATTTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARERTEP*TQHFVA
Trigger: AGCCACGAAATGTTGAGTGCAGGGCTCAGTTCTTTC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR GCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTGCACCGTACATTTCTaGTGGTTAGGTAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWCTVHF*WLGKGQ
Trigger: CTGTCCCTTACCTAACCAGCAGAAATGTACGGTGCA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTCTTGTTGGTATATTTaGTGTCCAACTCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATSCWYI*CPTPAE
Trigger: TTCTGCTGGAGTTGGACACCAAATATACCAACAAGA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGACCACAAGTCTTGTTaGTATATTTGGTGTCCAACT +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATDHKSC*YIWCPT
Trigger: AGTTGGACACCAAATATACCAACAAGACTTGTGGTC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGATTGGCTGTAGACACTaGCAACTGGGTGTAGATCTG +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWIGCRH*QLGVDL
Trigger: CAGATCTACACCCAGTTGCCAGTGTCTACAGCCAAT...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTAGATGTTTGCATAATTaGACTCAGCTGGATCTCAAG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATRCLHN*TQLDLK
Trigger: CTTGAGATCCAGCTGAGTCCAATTATGCAAACATCT...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTAGATGTTTGCATAATTaGACTCAGCTGGATCTCAAG +
Preference number: 4 (lower is better)
Translates to: RQVGRIQATFWPREDLLVRCLHN*TQLDLK
Trigger: CTTGAGATCCAGCTGAGTCCAATTATGCAAACATCT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGACCCCACTGATAGTCTaGAAGTCATCAGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWTPLIV*KSSACI
Trigger: TATGCAGGCTGATGACTTCCAGACTATCAGTGGGGT...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGGATGAAGCTGACATaGCAGGTGACATCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEGMKLT*QVTSFS
Trigger: TGAGAAAGATGTCACCTGCCATGTCAGCTTCATCCC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCAGTGTCACCAGGTGTaGCATTGTGACAGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHQCHQV*HCDSQN
Trigger: ATTTTGACTGTCACAATGCCACACCTGGTGACACTG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTAGAACTTGTATCCTTTaGATCTCAGGTTCACAAAGG +
Preference number: 4 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATRTCIL*ISGSQR
Trigger: CCTTTGTGAACCTGAGATCCAAAGGATACAAGTTCT...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACAGGAATACACATGGGTaGTCCAGTTGGTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHRNTHG*SSWSLF
Trigger: AAACAGAGACCAACTGGACCACCCATGTGTATTCCT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACTACTGGTGTCTTTTGTaGGAGAGGAATACACATGGG +
Preference number: 4 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHYWCLL*ERNTHG
Trigger: CCCATGTGTATTCCTCTCCCACAAAAGACACCAGTA...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTACTGGTGTCTTTTGTaGGAGAGGAATACACATGGG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSYWCLL*ERNTHG
Trigger: CCCATGTGTATTCCTCTCCCACAAAAGACACCAGTA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTTGCTGAGTGACTACTaGTGTCTTTTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPELLSDY*CLLWER
Trigger: CCTCTCCCACAAAAGACACCAGTAGTCACTCAGCAA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTGGTCACTGGTTGAGTaGTTGTGTGTGAAATACCTG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSWSLVE*LCVKYL
Trigger: CAGGTATTTCACACACAACCACTCAACCAGTGACCA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCAGTGTCAAACCACTTaGTCCAGTTGCACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEQCQTT*SSCTVA
Trigger: AGCTACAGTGCAACTGGACCAAGTGGTTTGACACTG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTGCAGATGAGGGCTTATaGGATAATGTCACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSADEGL*DNVTGE
Trigger: TTCTCCTGTGACATTATCCCATAAGCCCTCATCTGC...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGATGAGCAGGTGTTGTTaGTTTGGCTTCTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWMSRCC*FGFSRE
Trigger: TTCCCTGGAGAAGCCAAACCAACAACACCTGCTCAT...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTTTGGCAGGTTAGCGTaGCTTCCTTACAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEFGRLA*LPYRCS
Trigger: ACTGCATCTGTAAGGAAGCCACGCTAACCTGCCAAA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGATTTGGCAGGTTAGCGTaGCTTCCTTACAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARFGRLA*LPYRCS
Trigger: ACTGCATCTGTAAGGAAGCCACGCTAACCTGCCAAA...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTGAGGTTGAGATAGTTTaGGTTGTAGAGATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSEVEIV*VVEMVL
Trigger: CAGCACCATCTCTACAACCCAAACTATCTCAACCTC...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR TCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTGTGTCTATGGTTGCTaGGTGACTACTGGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPECVYGC*VTTGVF
Trigger: AAAGACACCAGTAGTCACTCAGCAACCATAGACACA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACACTTTCCTTGGACTTaGACTCTTGTTCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARHFPWT*TLVLRT
Trigger: AGTCCTCAGAACAAGAGTTCAAGTCCAAGGAAAGTG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGATGCCATCTAGCCAATTaGTCCAATTGCAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARCHLAN*SNCKAP
Trigger: AGGAGCTTTGCAATTGGACCAATTGGCTAGATGGCA...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTGCCATCTAGCCAATTaGTCCAATTGCAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWCHLAN*SNCKAP
Trigger: AGGAGCTTTGCAATTGGACCAATTGGCTAGATGGCA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAAGGAATACACATGGGTaGTCCAGTTGGTCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARRNTHG*SSWSLF
Trigger: AAACAGAGACCAACTGGACCACCCATGTGTATTCCT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTGGTCACTGGTTGAGTaGTTGTGTGTGAAATACCTG +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEWSLVE*LCVKYL
Trigger: CAGGTATTTCACACACAACCACTCAACCAGTGACCA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCAGATGAGGGCTTATaGGATAATGTCACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARADEGL*DNVTGE
Trigger: TTCTCCTGTGACATTATCCCATAAGCCCTCATCTGC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR TCA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGAGTAGTAGTTGTCAATaGGCACACGGAAGTATCCAA +
Preference number: 4 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPESSSCQ*AHGSIQ
Trigger: TTGGATACTTCCGTGTGCTCATTGACAACTACTACT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTAGAACTTGTATCCTTTaGATCTCAGGTTCACAAAGG +
Preference number: 4 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSRTCIL*ISGSQR
Trigger: CCTTTGTGAACCTGAGATCCAAAGGATACAAGTTCT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCACTCAACATTTCGTaGCTTCTCACAGAACTTGTA +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARALNIS*LLTELV
Trigger: TACAAGTTCTGTGAGAAGCCACGAAATGTTGAGTGC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CCA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACAAGTCTTGTTaGTATATTTGGTGTCCAACT +
Preference number: 4 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARDHKSC*YIWCPT
Trigger: AGTTGGACACCAAATATACCAACAAGACTTGTGGTC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp ATGACCCCGCTAACTGGCCTGCGGGTCAGCACCACACGGTCCTGGTaGTACTCCACAATGATGGACTGTGGGCAGGAGACGCTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: MTPLTGLRVSTTRSW*YSTMMDCGQETLSP
Trigger: GGGAGACAGCGTCTCCTGCCCACAGTCCATCATTGTGGAGTACCACCAGGACCGTGTGGTGCTGACCCGCAGGCCAGTTAGCGGGGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 90 bp CTGGCCTGCGGGTCAGCACCACACGGTCCTGGTGGTACTCCACAATaGTGGACTGTGGGCAGGAGACGCTGTCTCCCACGTCACAGTAGT +
Preference number: 5 (lower is better)
Translates to: LACGSAPHGPGGTPQ*WTVGRRRCLPRHSS
Trigger: ACTACTGTGACGTGGGAGACAGCGTCTCCTGCCCACAGTCCATCATTGTGGAGTACCACCAGGACCGTGTGGTGCTGACCCGCAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp GTCATGACCCCGCTAACTGGCCTGCGGGTCAGCACCACACGGTCCTaGTGGTACTCCACAATGATGGACTGTGGGCAGGAGACGCTGTCT +
Preference number: 5 (lower is better)
Translates to: VMTPLTGLRVSTTRS*WYSTMMDCGQETLS
Trigger: AGACAGCGTCTCCTGCCCACAGTCCATCATTGTGGAGTACCACCAGGACCGTGTGGTGCTGACCCGCAGGCCAGTTAGCGGGGTCATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp TGGGAGCCTCCCATTACTGAGCAGGTGCCAGCGCAGGGGATGTCCTaGCAGCTCCACTGCCCTCCAGAACATGTGCACTTGGTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: WEPPITEQVPAQGMS*QLHCPPEHVHLVQS
Trigger: TGACTGCACCAAGTGCACATGTTCTGGAGGGCAGTGGAGCTGCCAGGACATCCCCTGCGCTGGCACCTGCTCAGTAATGGGAGGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS TCA 90 bp ATAGGCTGGAGGAGACCACGTCACCAGGCTGGTAGAGAGTCCCGTTaGCTTCACAGCCCTTCTGACTGCTGCAGTTCTGGGTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: IGWRRPRHQAGRESR*LHSPSDCCSSGSGS
Trigger: GCTGCCCGACCCAGAACTGCAGCAGTCAGAAGGGCTGTGAAGTCAACGGGACTCTCTACCAGCCTGGTGACGTGGTCTCCTCCAGCCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp CAGCATGTGCACACTGCCGGGAGTACTCAGCGAGGGTATGGCAGATaGAGTCAGACGGGTCCAAGCTCTCACAGAGACAGACGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: QHVHTAGSTQRGYGR*SQTGPSSHRDRRPA
Trigger: GGCAGGACGTCTGTCTCTGTGAGAGCTTGGACCCGTCTGACTGCATCTGCCATACCCTCGCTGAGTACTCCCGGCAGTGTGCACATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp CCTTGTTGGCCTCCAGGGAGTACATGGAGATGCTGTCCCCGCAGTTaGCTTGGCAGTAGGAGATGCTCACTGGGCCCTCAGAGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PCWPPGSTWRCCPRS*LGSRRCSLGPQSCS
Trigger: ACTGCAGCTCTGAGGGCCCAGTGAGCATCTCCTACTGCCAAGGCAACTGCGGGGACAGCATCTCCATGTACTCCCTGGAGGCCAACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp TGCCCTCCAGCATGTGCACACTGCCGGGAGTACTCAGCGAGGGTATaGCAGATGCAGTCAGACGGGTCCAAGCTCTCACAGAGACAGACG +
Preference number: 5 (lower is better)
Translates to: CPPACAHCREYSARV*QMQSDGSKLSQRQT
Trigger: CGTCTGTCTCTGTGAGAGCTTGGACCCGTCTGACTGCATCTGCCATACCCTCGCTGAGTACTCCCGGCAGTGTGCACATGCTGGAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp TGGGAGCCTCCCATTACTGAGCAGGTGCCAGCGCAGGGGATGTCCTaGCAGCTCCACTGCCCTCCAGAACATGTGTTGGTGCAGTCAGTA +
Preference number: 5 (lower is better)
Translates to: WEPPITEQVPAQGMS*QLHCPPEHVLVQSV
Trigger: TACTGACTGCACCAACACATGTTCTGGAGGGCAGTGGAGCTGCCAGGACATCCCCTGCGCTGGCACCTGCTCAGTAATGGGAGGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000163321.3
CDS CCA 90 bp GGTGAAGGCCTGGGTACCACTGAAGTTGGAGTTGGTGGAGGCCCTTaGCAGGAAGGCTGGTTGGGCACCTTCCAGTGGAGGGACATCTCA +
Preference number: 5 (lower is better)
Translates to: GEGLGTTEVGVGGGP*QEGWLGTFQWRDIS
Trigger: TGAGATGTCCCTCCACTGGAAGGTGCCCAACCAGCCTTCCTGCCAAGGGCCTCCACCAACTCCAACTTCAGTGGTACCCAGGCCTTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTAGCCTGGCCTGTGCATaGGCTGCAGGCCAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVSLACA*AAGQGQ
Trigger: CTGGCCCTGGCCTGCAGCCAATGCACAGGCCAGGCT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 90 bp TCTCACAGAGACAGACGTCCTGCCGGCAAGCCTCCACGTAGCTGCTaGTGTCCACCAGGGCCGCACAGCCTGAGAACAGCTCACCTTTTA +
Preference number: 5 (lower is better)
Translates to: SHRDRRPAGKPPRSC*CPPGPHSLRTAHLL
Trigger: TAAAAGGTGAGCTGTTCTCAGGCTGTGCGGCCCTGGTGGACATCAGCAGCTACGTGGAGGCTTGCCGGCAGGACGTCTGTCTCTGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp GGTACGATTTCAGAGAGTCCTGTTGAGCCTGGCCTGTGCATTGGCTaGAGGCCAGGGCCAGGGCTAGGACCCAGAATGGGACCAACTTTC +
Preference number: 5 (lower is better)
Translates to: GTISESPVEPGLCIG*RPGPGLGPRMGPTF
Trigger: GAAAGTTGGTCCCATTCTGGGTCCTAGCCCTGGCCCTGGCCTGCAGCCAATGCACAGGCCAGGCTCAACAGGACTCTCTGAAATCGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp GAGGACCCTACACTCGGGGTAGGGCTGGAATGTGTGCTGGAGGGTTaGATTGAGGTCATGACGGGCGGTGTGGAGAAGGAGAAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: EDPTLGVGLECVLEG*IEVMTGGVEKEKVV
Trigger: CACCACTTTCTCCTTCTCCACACCGCCCGTCATGACCTCAATGCAACCCTCCAGCACACATTCCAGCCCTACCCCGAGTGTAGGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGAGTTGGTGGAGGCCCTaGGCAGGAAGGCTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQSWWRP*AGRLVG
Trigger: CCCAACCAGCCTTCCTGCCAAGGGCCTCCACCAACT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGGGCAGTGGCTGGAGTaGCAGGCACAGCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQGQWLE*QAQLNW
Trigger: CCAGTTCAGCTGTGCCTGCAACTCCAGCCACTGCCC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp TTTAGGATCATTTCACAGATACCAGATCTGGCGGAGCAGTTCTTCTaGGGCACAGGGAGGGGGTCTTGGCACTGCTCTGTGGGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: FRIISQIPDLAEQFF*GTGRGSWHCSVGPS
Trigger: GGACGGCCCCACAGAGCAGTGCCAAGACCCCCTCCCTGTGCCCCAGAAGAACTGCTCCGCCAGATCTGGTATCTGTGAAATGATCCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp GGGTGGTGGAGTTGCAGGTGTCAACGCTCCTCTCGATGGTACCATTaGCCCTGCAGTGTGCAGAGATGCAGCCTCCTATGCCATCTGTTG +
Preference number: 5 (lower is better)
Translates to: GWWSCRCQRSSRWYH*PCSVQRCSLLCHLL
Trigger: CAACAGATGGCATAGGAGGCTGCATCTCTGCACACTGCAGGGCCAATGGTACCATCGAGAGGAGCGTTGACACCTGCAACTCCACCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp CCACTGAAGTTGGAGTTGGTGGAGGCCCTTGGCAGGAAGGCTGGTTaGGCACCTTCCAGTGGAGGGACATCTCAGAACAAGAGGAGGCTA +
Preference number: 5 (lower is better)
Translates to: PLKLELVEALGRKAG*APSSGGTSQNKRRL
Trigger: TAGCCTCCTCTTGTTCTGAGATGTCCCTCCACTGGAAGGTGCCCAACCAGCCTTCCTGCCAAGGGCCTCCACCAACTCCAACTTCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp GGTACCACTGAAGTTGGAGTTGGTGGAGGCCCTTGGCAGGAAGGCTaGTTGGGCACCTTCCAGTGGAGGGACATCTCAGAACAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: GTTEVGVGGGPWQEG*LGTFQWRDISEQEE
Trigger: CTCCTCTTGTTCTGAGATGTCCCTCCACTGGAAGGTGCCCAACCAGCCTTCCTGCCAAGGGCCTCCACCAACTCCAACTTCAGTGGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp GGAGATGCTGTCCCCGCAGTTGCCTTGGCAGTAGGAGATGCTCACTaGGCCCTCAGAGCTGCAGTTTTGCTGACGGATGATCTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GDAVPAVALAVGDAH*ALRAAVLLTDDLLS
Trigger: AGACAGCAGATCATCCGTCAGCAAAACTGCAGCTCTGAGGGCCCAGTGAGCATCTCCTACTGCCAAGGCAACTGCGGGGACAGCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCACAGGGAGGGGGTCTaGGCACTGCTCTGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHHREGV*ALLCGA
Trigger: GGCCCCACAGAGCAGTGCCAAGACCCCCTCCCTGTG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTCTGGGAGCAGAGGTaGGGGCCCCGCCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARVWEQR*GPRQSW
Trigger: CCAGGACTGGCGGGGCCCCAACCTCTGCTCCCAGAC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCCACAGACCCTGCCCTaGAACTCAGGGCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQPQTLP*NSGLSL
Trigger: CAGACTCAGCCCTGAGTTCAAGGGCAGGGTCTGTGG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGTTGTCGATGCAGCCTaGCTTGAGGCCCCTGAGGAC +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQVVDAA*LEAPED
Trigger: GTCCTCAGGGGCCTCAAGCAAGGCTGCATCGACAAC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGAGGCCCCAGACACCATaGGCAGGAAGGCACGCAGAT +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQRPQTP*AGRHAD
Trigger: ATCTGCGTGCCTTCCTGCCAATGGTGTCTGGGGCCT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGAACTGGGGACAACATaGGCCAGCCTCCAGGGCTAC +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQELGTT*ASLQGY
Trigger: GTAGCCCTGGAGGCTGGCCAATGTTGTCCCCAGTTC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp CAGTCCCCATGTACTGTGTACTGCCTTCCATCAAATGTGGACATGTaGGAGCCTCCCATTACTGAGCAGGTGCCAGCGCAGGGGATGTCC +
Preference number: 5 (lower is better)
Translates to: QSPCTVYCLPSNVDM*EPPITEQVPAQGMS
Trigger: GGACATCCCCTGCGCTGGCACCTGCTCAGTAATGGGAGGCTCCCACATGTCCACATTTGATGGAAGGCAGTACACAGTACATGGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp ATGCAGTTCGAGAAGAAGGTGCTGGGGTTCACGGTGGCGTGGCACTaGGAAAATGGACCACTGGCGTTAGTCAGCAGAGAACACCAGTGC +
Preference number: 5 (lower is better)
Translates to: MQFEKKVLGFTVAWH*ENGPLALVSREHQC
Trigger: GCACTGGTGTTCTCTGCTGACTAACGCCAGTGGTCCATTTTCCCAGTGCCACGCCACCGTGAACCCCAGCACCTTCTTCTCGAACTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp GCTAGCCTCAGCACGGCACTCTACTGCTTTTGGCACTTGGCAGATTaGGTAGCCATGGGCACGGAGGTTCTCCAGAGTGTCAAAGTCACC +
Preference number: 5 (lower is better)
Translates to: ASLSTALYCFWHLAD*VAMGTEVLQSVKVT
Trigger: GGTGACTTTGACACTCTGGAGAACCTCCGTGCCCATGGCTACCCAATCTGCCAAGTGCCAAAAGCAGTAGAGTGCCGTGCTGAGGCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp CTCGGCTGCAGGTCACATTCTGCCCCAGCTCCTCCAGTGGTGTGTTaGGAAAGAACTGAGCCCTGCACTCAACATTTCGTGGCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: LGCRSHSAPAPPVVC*ERTEPCTQHFVASH
Trigger: GTGAGAAGCCACGAAATGTTGAGTGCAGGGCTCAGTTCTTTCCCAACACACCACTGGAGGAGCTGGGGCAGAATGTGACCTGCAGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAAGCCTGGCCTGTGCATaGGCTGCAGGCCAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARSLACA*AAGQGQ
Trigger: CTGGCCCTGGCCTGCAGCCAATGCACAGGCCAGGCT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACACAGGGAGGGGGTCTaGGCACTGCTCTGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARHREGV*ALLCGA
Trigger: GGCCCCACAGAGCAGTGCCAAGACCCCCTCCCTGTG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGTTGTTGCATCCCACTaGGATGGTCTCCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQVVASH*DGLPRP
Trigger: AGGCCTGGGGAGACCATCCAAGTGGGATGCAACAAC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGCCCGCTGCAAACACATaGGCACTGGTAGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQPAANT*ALVVLA
Trigger: TGCCAGCACTACCAGTGCCAATGTGTTTGCAGCGGG...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCTTGGGACCAGCCTCTaGAAGGGTCAGGCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATLGTSL*KGQAWA
Trigger: AGCCCAAGCCTGACCCTTCAAGAGGCTGGTCCCAAG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 90 bp GTGGGCAGGAGACGCTGTCTCCCACGTCACAGTAGTAGTTGTCAATaGGCACACGGAAGTATCCAAACACGGGCACGATCTGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: VGRRRCLPRHSSSCQ*AHGSIQTRARSAAP
Trigger: TGGTGCAGCAGATCGTGCCCGTGTTTGGATACTTCCGTGTGCTCATTGACAACTACTACTGTGACGTGGGAGACAGCGTCTCCTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp CCAGGCAAGGCTTGTCTGTGCATTGCCACATCCTGTTCTCACAGGTaGAGTTGTTGCATCCCACTTGGATGGTCTCCCCAGGCCTATAGG +
Preference number: 5 (lower is better)
Translates to: PGKACLCIATSCSHR*SCCIPLGWSPQAYR
Trigger: CCTATAGGCCTGGGGAGACCATCCAAGTGGGATGCAACAACTGCACCTGTGAGAACAGGATGTGGCAATGCACAGACAAGCCTTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp CCATTGACGCGGCAGGGGAAGGTGACTGTACAGTTGGATACACACTaGATTGTGCCCTCATCAAAGATGGGGGCTGTTGGTGGGCACTTG +
Preference number: 5 (lower is better)
Translates to: PLTRQGKVTVQLDTH*IVPSSKMGAVGGHL
Trigger: CAAGTGCCCACCAACAGCCCCCATCTTTGATGAGGGCACAATGCAGTGTGTATCCAACTGTACAGTCACCTTCCCCTGCCGCGTCAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp TGGAGTTGCAGGTGTCAACGCTCCTCTCGATGGTACCATTGGCCCTaGAGTGTGCAGAGATGCAGCCTCCTATGCCATCTGTTGTGTGGT +
Preference number: 5 (lower is better)
Translates to: WSCRCQRSSRWYHWP*SVQRCSLLCHLLCG
Trigger: ACCACACAACAGATGGCATAGGAGGCTGCATCTCTGCACACTGCAGGGCCAATGGTACCATCGAGAGGAGCGTTGACACCTGCAACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp CACAGGGATGGTCTTCAGAGGTGGGATGATGGTCACCCTATTGAGTaGGGTACCAACATGCCCTTGAGGGTGAGGAACATCAGAGCGGTG +
Preference number: 5 (lower is better)
Translates to: HRDGLQRWDDGHPIE*GTNMPLRVRNIRAV
Trigger: CACCGCTCTGATGTTCCTCACCCTCAAGGGCATGTTGGTACCCCACTCAATAGGGTGACCATCATCCCACCTCTGAAGACCATCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp GGTCAGCACCACACGGTCCTGGTGGTACTCCACAATGATGGACTGTaGGCAGGAGACGCTGTCTCCCACGTCACAGTAGTAGTTGTCAAT +
Preference number: 5 (lower is better)
Translates to: GQHHTVLVVLHNDGL*AGDAVSHVTVVVVN
Trigger: ATTGACAACTACTACTGTGACGTGGGAGACAGCGTCTCCTGCCCACAGTCCATCATTGTGGAGTACCACCAGGACCGTGTGGTGCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp CAGCACTGCCCTGGCATGGCCTGGTACTCAGAGCCCTTAGGACACTaGGTGTTACAGAGCTCAGTCTCACAGCTGACCATAAAGACATCG +
Preference number: 5 (lower is better)
Translates to: QHCPGMAWYSEPLGH*VLQSSVSQLTIKTS
Trigger: CGATGTCTTTATGGTCAGCTGTGAGACTGAGCTCTGTAACACCCAGTGTCCTAAGGGCTCTGAGTACCAGGCCATGCCAGGGCAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp AGGTTTGCAGCTCCTGGCAACACTCACATGTGTGCTCTACCTTGTTaGCCTCCAGGGAGTACATGGAGATGCTGTCCCCGCAGTTGCCTT +
Preference number: 5 (lower is better)
Translates to: RFAAPGNTHMCALPC*PPGSTWRCCPRSCL
Trigger: AAGGCAACTGCGGGGACAGCATCTCCATGTACTCCCTGGAGGCCAACAAGGTAGAGCACACATGTGAGTGTTGCCAGGAGCTGCAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCTGGTATGTCCTGGGTaGAAGGCTCGTACCACAGGG +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATLVCPG*KARTTG
Trigger: CCCTGTGGTACGAGCCTTCAACCCAGGACATACCAG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGTTGTTGCATCCCACTaGGATGGTCTCCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATVVASH*DGLPRP
Trigger: AGGCCTGGGGAGACCATCCAAGTGGGATGCAACAAC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACAGTTGGTGGAGGCCCTaGGCAGGAAGGCTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHSWWRP*AGRLVG
Trigger: CCCAACCAGCCTTCCTGCCAAGGGCCTCCACCAACT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGTCTTCGGTATACACTaGCCACAGCACTGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVVFGIH*PQHCPG
Trigger: GCCAGGGCAGTGCTGTGGCAAGTGTATACCGAAGAC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp TCTCCATACACAGCACAGGTGGCCAGGCAAGGCTTGTCTGTGCATTaGCACATCCTGTTCTCACAGGTGCAGTTGTTGCATCCCACTTGG +
Preference number: 5 (lower is better)
Translates to: SPYTAQVARQGLSVH*HILFSQVQLLHPTW
Trigger: CCAAGTGGGATGCAACAACTGCACCTGTGAGAACAGGATGTGGCAATGCACAGACAAGCCTTGCCTGGCCACCTGTGCTGTGTATGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp GCAGGTGTCAACGCTCCTCTCGATGGTACCATTGGCCCTGCAGTGTaGAGAGATGCAGCCTCCTATGCCATCTGTTGTGTGGTAGATGAT +
Preference number: 5 (lower is better)
Translates to: AGVNAPLDGTIGPAV*RDAASYAICCVVDD
Trigger: ATCATCTACCACACAACAGATGGCATAGGAGGCTGCATCTCTGCACACTGCAGGGCCAATGGTACCATCGAGAGGAGCGTTGACACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp ATGTCCTGGGTTGAAGGCTCGTACCACAGGGATGGTCTTCAGAGGTaGGATGATGGTCACCCTATTGAGTGGGGTACCAACATGCCCTTG +
Preference number: 5 (lower is better)
Translates to: MSWVEGSYHRDGLQR*DDGHPIEWGTNMPL
Trigger: CAAGGGCATGTTGGTACCCCACTCAATAGGGTGACCATCATCCCACCTCTGAAGACCATCCCTGTGGTACGAGCCTTCAACCCAGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp AGCTCAATGAGGACCCCAGACTGGCTAAAGGGCAGCTGGACCGGGTaGTTATTGACTAAGACGGAGCTCTTGGTCAGCTCAACAACTAGG +
Preference number: 5 (lower is better)
Translates to: SSMRTPDWLKGSWTG*LLTKTELLVSSTTR
Trigger: CCTAGTTGTTGAGCTGACCAAGAGCTCCGTCTTAGTCAATAACCACCCGGTCCAGCTGCCCTTTAGCCAGTCTGGGGTCCTCATTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp AACACTCACATGTGTGCTCTACCTTGTTGGCCTCCAGGGAGTACATaGAGATGCTGTCCCCGCAGTTGCCTTGGCAGTAGGAGATGCTCA +
Preference number: 5 (lower is better)
Translates to: NTHMCALPCWPPGST*RCCPRSCLGSRRCS
Trigger: TGAGCATCTCCTACTGCCAAGGCAACTGCGGGGACAGCATCTCCATGTACTCCCTGGAGGCCAACAAGGTAGAGCACACATGTGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTTTCAGAGAGTCCTGTaGAGCCTGGCCTGTGCATTG +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQFQRVL*SLACAL
Trigger: CAATGCACAGGCCAGGCTCAACAGGACTCTCTGAAA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCTGAGCAGCACGCCTTaGGCAGCACAAGCACGCACA +
Preference number: 5 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSLSSTP*AAQART
Trigger: TGTGCGTGCTTGTGCTGCCAAAGGCGTGCTGCTCAG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCTGAGCAGCACGCCTTaGGCAGCACAAGCACGCACA +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHLSSTP*AAQART
Trigger: TGTGCGTGCTTGTGCTGCCAAAGGCGTGCTGCTCAG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTCTAAGAAGGTGCCTTaGGGGCAGGTGCAGCCATCT +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATSKKVP*GQVQPS
Trigger: AGATGGCTGCACCTGCCCCAAAGGCACCTTCTTAGA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTGCACAGACTCGCCATaGGGAACTGTGGATCCCTTG +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATCTDSP*GTVDPL
Trigger: CAAGGGATCCACAGTTCCCAATGGCGAGTCTGTGCA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTCACAGGTGCAGTTGTaGCATCCCACTTGGATGGTC +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQSQVQL*HPTWMV
Trigger: GACCATCCAAGTGGGATGCAACAACTGCACCTGTGA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCCCAGGATGGAACTGTaGCCCGTTGTAGGTACAGAC +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATPRMEL*PVVGTD
Trigger: GTCTGTACCTACAACGGGCAACAGTTCCATCCTGGG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTAGATCAGCCCCACTGTaGTGCTACACTCCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVRSAPL*CYTPGA
Trigger: AGCACCTGGAGTGTAGCACAACAGTGGGGCTGATCT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCCACTGAAGTTGGAGTaGGTGGAGGCCCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHPLKLE*VEALGR
Trigger: CCTGCCAAGGGCCTCCACCAACTCCAACTTCAGTGG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGCAGGTGTTGTTGGTTaGGCTTCTCCAGGGAATGCA +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQAGVVG*ASPGNA
Trigger: TGCATTCCCTGGAGAAGCCAAACCAACAACACCTGC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACGAACTGGGGACAACATaGGCCAGCCTCCAGGGCTAC +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHELGTT*ASLQGY
Trigger: GTAGCCCTGGAGGCTGGCCAATGTTGTCCCCAGTTC...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGCAGTGGCTGGAGTaGCAGGCACAGCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARGQWLE*QAQLNW
Trigger: CCAGTTCAGCTGTGCCTGCAACTCCAGCCACTGCCC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTAGCTGGTTTGGGGTGTaGAGGGGGTGCTGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSSWFGV*RGCWPF
Trigger: GAAAGGCCAGCACCCCCTCAACACCCCAAACCAGCT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS TCA 90 bp AAGATGGTTCATTCAGCTCTGGGCACTGGCGTGGGCTCAAGGAGATaGCATTGTTGCCCTCACAGGTGGCTTGGGAACAATTCGGCATTG +
Preference number: 5 (lower is better)
Translates to: KMVHSALGTGVGSRR*HCCPHRWLGNNSAL
Trigger: CAATGCCGAATTGTTCCCAAGCCACCTGTGAGGGCAACAATGTCATCTCCTTGAGCCCACGCCAGTGCCCAGAGCTGAATGAACCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 90 bp CCAGACACCATTGGCAGGAAGGCACGCAGATTGAGTCATTGGTACTaGAAAGTGTCGTGCTGTCTGGACAGAAGCAGCCCTCTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: PDTIGRKARRLSHWY*KVSCCLDRSSPLSW
Trigger: CCAAGACAGAGGGCTGCTTCTGTCCAGACAGCACGACACTTTTCAGTACCAATGACTCAATCTGCGTGCCTTCCTGCCAATGGTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp ATTGGGACAAGCCGCCTGAGTCTTGAAGGTGTTGAAGAAAGCAGCTaGTGTGCCCTCCACAACCCCACTGATAGTCTGGAAGTCATCAGC +
Preference number: 5 (lower is better)
Translates to: IGTSRLSLEGVEESS*CALHNPTDSLEVIS
Trigger: GCTGATGACTTCCAGACTATCAGTGGGGTTGTGGAGGGCACAGCAGCTGCTTTCTTCAACACCTTCAAGACTCAGGCGGCTTGTCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp TTGTTTTTAAAAGGGCAGGTCTTCGGTATACACTTGCCACAGCACTaGCCTGGCATGGCCTGGTACTCAGAGCCCTTAGGACACTGGGTG +
Preference number: 5 (lower is better)
Translates to: LFLKGQVFGIHLPQH*PGMAWYSEPLGHWV
Trigger: CACCCAGTGTCCTAAGGGCTCTGAGTACCAGGCCATGCCAGGGCAGTGCTGTGGCAAGTGTATACCGAAGACCTGCCCTTTTAAAAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp GTTGGATACACACTGCATTGTGCCCTCATCAAAGATGGGGGCTGTTaGTGGGCACTTGGGATAGCATCCTTCCAGACCACGGAGATCTTG +
Preference number: 5 (lower is better)
Translates to: VGYTLHCALIKDGGC*WALGIASFQTTEIL
Trigger: CAAGATCTCCGTGGTCTGGAAGGATGCTATCCCAAGTGCCCACCAACAGCCCCCATCTTTGATGAGGGCACAATGCAGTGTGTATCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp GATGACATTGTTGCCCTCACAGGTGGCTTGGGAACAATTCGGCATTaGCCAGGTCTCTCCTCTCAGTCTTGGAGGAAACACATTGCACCG +
Preference number: 5 (lower is better)
Translates to: DDIVALTGGLGTIRH*PGLSSQSWRKHIAP
Trigger: CGGTGCAATGTGTTTCCTCCAAGACTGAGAGGAGAGACCTGGCCAATGCCGAATTGTTCCCAAGCCACCTGTGAGGGCAACAATGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp CTTCAGAGGTGGGTAACCATTGGCACAAGATGGTTCATTCAGCTCTaGGCACTGGCGTGGGCTCAAGGAGATGACATTGTTGCCCTCACA +
Preference number: 5 (lower is better)
Translates to: LQRWVTIGTRWFIQL*ALAWAQGDDIVALT
Trigger: TGTGAGGGCAACAATGTCATCTCCTTGAGCCCACGCCAGTGCCCAGAGCTGAATGAACCATCTTGTGCCAATGGTTACCCACCTCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp TACTTTGTTGTTGAAGATGATCTGGTTGGTCATGACCCCGCTAACTaGCCTGCGGGTCAGCACCACACGGTCCTGGTGGTACTCCACAAT +
Preference number: 5 (lower is better)
Translates to: YFVVEDDLVGHDPAN*PAGQHHTVLVVLHN
Trigger: ATTGTGGAGTACCACCAGGACCGTGTGGTGCTGACCCGCAGGCCAGTTAGCGGGGTCATGACCAACCAGATCATCTTCAACAACAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTTTCAGAGAGTCCTGTaGAGCCTGGCCTGTGCATTG +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVFQRVL*SLACAL
Trigger: CAATGCACAGGCCAGGCTCAACAGGACTCTCTGAAA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTGGGAATGCTGGGGGTaGGAGCAGGTGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEWECWG*EQVSTQ
Trigger: CTGTGTGGACACCTGCTCCAACCCCCAGCATTCCCA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACCACAGACCCTGCCCTaGAACTCAGGGCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARPQTLP*NSGLSL
Trigger: CAGACTCAGCCCTGAGTTCAAGGGCAGGGTCTGTGG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCAAAGATGGGGGCTGTaGGTGGGCACTTGGGATAGC +
Preference number: 5 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSQRWGL*VGTWDS
Trigger: GCTATCCCAAGTGCCCACCAACAGCCCCCATCTTTG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTTGTCGATGCAGCCTaGCTTGAGGCCCCTGAGGAC +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARVVDAA*LEAPED
Trigger: GTCCTCAGGGGCCTCAAGCAAGGCTGCATCGACAAC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTGGTGGACCCTGAGGTaGAGATGGACACAGACGATA +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVWWTLR*RWTQTI
Trigger: TATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGGTGGCAGCTGGTTCTaGTTCAAACAGATCAAACCC +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQGGSWF*FKQIKP
Trigger: GGGTTTGATCTGTTTGAACAAGAACCAGCTGCCACC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGAAGCTGTGGAACAGTaGTTTACCACTGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQEAVEQ*FTTVQH
Trigger: GTGCTGCACAGTGGTAAACAACTGTTCCACAGCTTC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTACATGGGTGGTCCAGTaGGTCTCTGTTTTCGTGCTG +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATTWVVQ*VSVFVL
Trigger: CAGCACGAAAACAGAGACCAACTGGACCACCCATGT...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCCCGCTGCAAACACATaGGCACTGGTAGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHPAANT*ALVVLA
Trigger: TGCCAGCACTACCAGTGCCAATGTGTTTGCAGCGGG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCCACTGAAGTTGGAGTaGGTGGAGGCCCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEPLKLE*VEALGR
Trigger: CCTGCCAAGGGCCTCCACCAACTCCAACTTCAGTGG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCTTGGGACCAGCCTCTaGAAGGGTCAGGCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPELGTSL*KGQAWA
Trigger: AGCCCAAGCCTGACCCTTCAAGAGGCTGGTCCCAAG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAAGGCCCCAGACACCATaGGCAGGAAGGCACGCAGAT +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARRPQTP*AGRHAD
Trigger: ATCTGCGTGCCTTCCTGCCAATGGTGTCTGGGGCCT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGAGCTGGTATGGGGTGTaGAGGGGGTGCTGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPESWYGV*RGCWPF
Trigger: GAAAGGCCAGCACCCCCTCAACACCCCATACCAGCT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS TCA 90 bp CCATTGTACAGGCAGGCACACTGGGACACAGGAACACAGCCCATCTaGTTAATGTCATCAAGCACCATACCCTCAGGACAGAAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: PLYRQAHWDTGTQPI*LMSSSTIPSGQKQP
Trigger: TGGCTGCTTCTGTCCTGAGGGTATGGTGCTTGATGACATTAATCAGATGGGCTGTGTTCCTGTGTCCCAGTGTGCCTGCCTGTACAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 90 bp CTCAAGCTGCAAACCCAGGTTGGTCTCACCAACGATGAAGAAGGTTaGAGGCCGGAAGAAGGTAGCATTGGCTGTAGACACTGGCAACTG +
Preference number: 5 (lower is better)
Translates to: LKLQTQVGLTNDEEG*RPEEGSIGCRHWQL
Trigger: CAGTTGCCAGTGTCTACAGCCAATGCTACCTTCTTCCGGCCTTCAACCTTCTTCATCGTTGGTGAGACCAACCTGGGTTTGCAGCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 90 bp AGTGTGCAGAGATGCAGCCTCCTATGCCATCTGTTGTGTGGTAGATaGTCTCCCCAGGATGGAACTGTTGCCCGTTGTAGGTACAGACAC +
Preference number: 5 (lower is better)
Translates to: SVQRCSLLCHLLCGR*SPQDGTVARCRYRH
Trigger: GTGTCTGTACCTACAACGGGCAACAGTTCCATCCTGGGGAGATCATCTACCACACAACAGATGGCATAGGAGGCTGCATCTCTGCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 90 bp GGGGGTACAGCACTGGACTTTGATCTGGTAGTTGTCACAGAGCCCTaGCAGCTGATCACTGTTGTAACAGATCAGCCCCACTGTTGTGCT +
Preference number: 5 (lower is better)
Translates to: GGTALDFDLVVVTEP*QLITVVTDQPHCCA
Trigger: AGCACAACAGTGGGGCTGATCTGTTACAACAGTGATCAGCTGTCAGGGCTCTGTGACAACTACCAGATCAAAGTCCAGTGCTGTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp CTCCAGTGTCACCAGGTGTGGCATTGTGACAGTCAAAATAGATCATaGGTGCATCACACACTGGAGTCGGGGCAGGACCTCCAATACAAG +
Preference number: 5 (lower is better)
Translates to: LQCHQVWHCDSQNRS*VHHTLESGQDLQYK
Trigger: CTTGTATTGGAGGTCCTGCCCCGACTCCAGTGTGTGATGCACCCATGATCTATTTTGACTGTCACAATGCCACACCTGGTGACACTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp TGCAAAGCTCCTGTTTGCACTCATGAGTTGTCTCAGAGGAAGGCATaGTGGACCCTGAGGTTGAGATGGACACAGACGATATGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CKAPVCTHELSQRKA*WTLRLRWTQTIWLE
Trigger: CTCCAGCCATATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAGACAACTCATGAGTGCAAACAGGAGCTTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACTGGTATGTCCTGGGTaGAAGGCTCGTACCACAGGG +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARLVCPG*KARTTG
Trigger: CCCTGTGGTACGAGCCTTCAACCCAGGACATACCAG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGAAGATGCTAGTCTTCTaGTCCCACAAAAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQKMLVF*SHKSTR
Trigger: CCTGGTGCTTTTGTGGGACAAGAAGACTAGCATCTT...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCAAAGATGGGGGCTGTaGGTGGGCACTTGGGATAGC +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEQRWGL*VGTWDS
Trigger: GCTATCCCAAGTGCCCACCAACAGCCCCCATCTTTG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCCCAGGATGGAACTGTaGCCCGTTGTAGGTACAGAC +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHPRMEL*PVVGTD
Trigger: GTCTGTACCTACAACGGGCAACAGTTCCATCCTGGG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTTACTGCTTTTGGCACTaGGCAGATTGGGTAGCCATG +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATYCFWH*ADWVAM
Trigger: CATGGCTACCCAATCTGCCAAGTGCCAAAAGCAGTA...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACAGATCAGCCCCACTGTaGTGCTACACTCCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHRSAPL*CYTPGA
Trigger: AGCACCTGGAGTGTAGCACAACAGTGGGGCTGATCT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGGCTTCTCACAGAACTaGTATCCTTTGGATCTCAGG +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQGFSQN*YPLDLR
Trigger: CCTGAGATCCAAAGGATACAAGTTCTGTGAGAAGCC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGGTGGCAGCTGGTTCTaGTTCAAACAGATCAAACCC +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATGGSWF*FKQIKP
Trigger: GGGTTTGATCTGTTTGAACAAGAACCAGCTGCCACC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTCACTGGTTGAGTGGTaGTGTGTGAAATACCTGAGG +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQSLVEW*CVKYLR
Trigger: CCTCAGGTATTTCACACACAACCACTCAACCAGTGA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACAACCACTTGGTCCAGTaGCACTGTAGCTGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHNHLVQ*HCSWQW
Trigger: CCACTGCCAGCTACAGTGCAACTGGACCAAGTGGTT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTCAGTGTCAAACCACTaGGTCCAGTTGCACTGTAGC +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVSVSNH*VQLHCS
Trigger: GCTACAGTGCAACTGGACCAAGTGGTTTGACACTGA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTTGTTGGCAAACAAGTaGAAAGGCACCTCGACGGAG +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVLLANK*KGTSTE
Trigger: CTCCGTCGAGGTGCCTTTCAACTTGTTTGCCAACAA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGTGAATGAGCAGGTGTaGTTGGTTTGGCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVVNEQV*LVWLLQ
Trigger: CTGGAGAAGCCAAACCAACAACACCTGCTCATTCAC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTCTTCGGTATACACTaGCCACAGCACTGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARVFGIH*PQHCPG
Trigger: GCCAGGGCAGTGCTGTGGCAAGTGTATACCGAAGAC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACAGGACTCTGCATGGCTaGTGTCCCCTAAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHRTLHG*CPLKHG
Trigger: GCCATGCTTTAGGGGACACAAGCCATGCAGAGTCCT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGAGCTGGTTTGGGGTGTaGATGGGGTGCTGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPESWFGV*MGCWPF
Trigger: GAAAGGCCAGCACCCCATCAACACCCCAAACCAGCT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS TCA 90 bp ACGGCAGGTGGGCTGGCAGGTGCTGATATGGTATTGATAGGTCATTaGCTTGGGACAGGTAATTGTAGGCTTTGTGCAGATGCCATCCCT +
Preference number: 5 (lower is better)
Translates to: TAGGLAGADMVLIGH*LGTGNCRLCADAIP
Trigger: AGGGATGGCATCTGCACAAAGCCTACAATTACCTGTCCCAAGTCAATGACCTATCAATACCATATCAGCACCTGCCAGCCCACCTGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 90 bp GTCACATTCTGCCCCAGCTCCTCCAGTGGTGTGTTGGGAAAGAACTaGGCCCTGCACTCAACATTTCGTGGCTTCTCACAGAACTTGTAT +
Preference number: 5 (lower is better)
Translates to: VTFCPSSSSGVLGKN*ALHSTFRGFSQNLY
Trigger: ATACAAGTTCTGTGAGAAGCCACGAAATGTTGAGTGCAGGGCTCAGTTCTTTCCCAACACACCACTGGAGGAGCTGGGGCAGAATGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 90 bp TCCAGAACATGTGTTGGTGCAGTCAGTAGAGTAATTGGTACCCGGTaGATAAAGTGTCCCATTGTACAGGCAGGCACACTGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: SRTCVGAVSRVIGTR*IKCPIVQAGTLGHR
Trigger: CCTGTGTCCCAGTGTGCCTGCCTGTACAATGGGACACTTTATGCACCGGGTACCAATTACTCTACTGACTGCACCAACACATGTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000163321.3
CDS GCA 90 bp AGAACATGTGCACTTGGTGCAGTCAGTAGAGTAATTGGTACCCGGTaGATAAAGTGTCCCATTGTACAGGCAGGCACACTGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: RTCALGAVSRVIGTR*IKCPIVQAGTLGHR
Trigger: CCTGTGTCCCAGTGTGCCTGCCTGTACAATGGGACACTTTATGCACCGGGTACCAATTACTCTACTGACTGCACCAAGTGCACATGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS GCA 90 bp GTATTGGGTGAGCTGGTTTGGGGCATGGAAGTACTGCTTGCTACATaGATGGAAGTGGTGCCAGGTGTTGAGCTGGTGACAATCTCACTT +
Preference number: 5 (lower is better)
Translates to: VLGELVWGMEVLLAT*MEVVPGVELVTISL
Trigger: AAGTGAGATTGTCACCAGCTCAACACCTGGCACCACTTCCATGCATGTAGCAAGCAGTACTTCCATGCCCCAAACCAGCTCACCCAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CCA 90 bp TTGAAGAAAGCAGCTGCTGTGCCCTCCACAACCCCACTGATAGTCTaGAAGTCATCAGCCTGCATACTGTTGAAGTTACCACAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: LKKAAAVPSTTPLIV*KSSACILLKLPQSP
Trigger: TGGGCTCTGTGGTAACTTCAACAGTATGCAGGCTGATGACTTCCAGACTATCAGTGGGGTTGTGGAGGGCACAGCAGCTGCTTTCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp GGGTGTGACAGCTCTTCTGACATCCAGCTCCAGTGTCACCAGGTGTaGCATTGTGACAGTCAAAATAGATCATGGGTGCATCACACACTG +
Preference number: 5 (lower is better)
Translates to: GCDSSSDIQLQCHQV*HCDSQNRSWVHHTL
Trigger: CAGTGTGTGATGCACCCATGATCTATTTTGACTGTCACAATGCCACACCTGGTGACACTGGAGCTGGATGTCAGAAGAGCTGTCACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp AAAGCTCCTGTTTGCACTCATGAGTTGTCTCAGAGGAAGGCATGGTaGACCCTGAGGTTGAGATGGACACAGACGATATGGCTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: KAPVCTHELSQRKAW*TLRLRWTQTIWLEL
Trigger: CAACTCCAGCCATATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAGACAACTCATGAGTGCAAACAGGAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
CDS CCA 90 bp ATGAGGGCTTATGGGATAATGTCACAGGAGAAGTCTGATCAGTCCTaGGGCAGTCTTCAGGAATGTGACAGCACAGCAGTCGCACCTCAT +
Preference number: 5 (lower is better)
Translates to: MRAYGIMSQEKSDQS*GSLQECDSTAVAPH
Trigger: ATGAGGTGCGACTGCTGTGCTGTCACATTCCTGAAGACTGCCCCAGGACTGATCAGACTTCTCCTGTGACATTATCCCATAAGCCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp TGCAAAGCTCCTGTTTGCACTCATGAGTTGTTTCAGAGGAAGGCATaGTGGACCCTGAGGTTGAGATGGACACAGACGATATGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CKAPVCTHELFQRKA*WTLRLRWTQTIWLE
Trigger: CTCCAGCCATATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAAACAACTCATGAGTGCAAACAGGAGCTTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTGGTACCAACATGCCCTaGAGGGTGAGGAACATCAGA +
Preference number: 5 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSGTNMP*RVRNIR
Trigger: TCTGATGTTCCTCACCCTCAAGGGCATGTTGGTACC...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGATGCACAGACTCGCCATaGGGAACTGTGGATCCCTTG +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARCTDSP*GTVDPL
Trigger: CAAGGGATCCACAGTTCCCAATGGCGAGTCTGTGCA...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTCACAGGTGCAGTTGTaGCATCCCACTTGGATGGTC +
Preference number: 5 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSSQVQL*HPTWMV
Trigger: GACCATCCAAGTGGGATGCAACAACTGCACCTGTGA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTAAGATGCTAGTCTTCTaGTCCCACAAAAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATKMLVF*SHKSTR
Trigger: CCTGGTGCTTTTGTGGGACAAGAAGACTAGCATCTT...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCACTGGCCCTCTGTGTaGTTGGCAAACAAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVHWPSV*LANKLK
Trigger: TTTCAACTTGTTTGCCAACAACACAGAGGGCCAGTG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTGGGTACCACTGAAGTaGGAGTTGGTGGAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWWVPLK*ELVEAL
Trigger: AAGGGCCTCCACCAACTCCAACTTCAGTGGTACCCA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTGCAGGTGTTGTTGGTTaGGCTTCTCCAGGGAATGCA +
Preference number: 5 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSAGVVG*ASPGNA
Trigger: TGCATTCCCTGGAGAAGCCAAACCAACAACACCTGC...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTACAAGGCTGGTATACTaGGTTATCAGGGCACGTGAA +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVTRLVY*VIRARE
Trigger: TTCACGTGCCCTGATAACCAAGTATACCAGCCTTGT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTATTCCTCTGAGAGGTTaGCAGCTCCTGGCAACACTC +
Preference number: 5 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSIPLRG*QLLATL
Trigger: GAGTGTTGCCAGGAGCTGCAAACCTCTCAGAGGAAT...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAAGGACTCTGCATGGCTaGTGTCCCCTAAAGCATGGC +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARRTLHG*CPLKHG
Trigger: GCCATGCTTTAGGGGACACAAGCCATGCAGAGTCCT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGTCACTTTCCTTGGACTaGAACTCTTGTTCTGAGGAC +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQSLSLD*NSCSED
Trigger: GTCCTCAGAACAAGAGTTCAAGTCCAAGGAAAGTGA...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCTGGTCTTTCCTGTATaGGGTGAGCTGGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPELVFPV*GELVWG
Trigger: GCCCCAAACCAGCTCACCCAATACAGGAAAGACCAG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCTGGTCTTTCCTGTATaGGGTGAGCTGGTATGGGGT +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHLVFPV*GELVWG
Trigger: ACCCCATACCAGCTCACCCAATACAGGAAAGACCAG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR CAA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCTGGTCTTTCCTGTATaGGGTGAGCTGGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSLVFPV*GELVWG
Trigger: ACCCCAAACCAGCTCACCCAATACAGGAAAGACCAG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS GCA 90 bp TTCTGCCAGACCCAGGGTAACTGCCATCTAGCCAATTGGTCCAATTaGAAAGCTCCTGTTTGCACTCATGAGTTGTCTCAGAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: FCQTQGNCHLANWSN*KAPVCTHELSQRKA
Trigger: TGCCTTCCTCTGAGACAACTCATGAGTGCAAACAGGAGCTTTGCAATTGGACCAATTGGCTAGATGGCAGTTACCCTGGGTCTGGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
CDS CCA 90 bp AAAGCTCCTGTTTGCACTCATGAGTTGTTTCAGAGGAAGGCATGGTaGACCCTGAGGTTGAGATGGACACAGACGATATGGCTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: KAPVCTHELFQRKAW*TLRLRWTQTIWLEL
Trigger: CAACTCCAGCCATATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAAACAACTCATGAGTGCAAACAGGAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCAGAGACCACAAGTCTaGTTGGTATATTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATQRPQV*LVYLVS
Trigger: GGACACCAAATATACCAACAAGACTTGTGGTCTCTG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGTAGCCTGTACACATTaGCCCAAATCATCTAAGAAG +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQVACTH*PKSSKK
Trigger: CTTCTTAGATGATTTGGGCAAATGTGTACAGGCTAC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACAGGCTTGTCTGTGCATaGCCACATCCTGTTCTCACA +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHRLVCA*PHPVLT
Trigger: TGTGAGAACAGGATGTGGCAATGCACAGACAAGCCT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCGTGTGGTGAAGTCATaGATGGCATTGTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVRVVKS*MALSSK
Trigger: CTTTGATGACAATGCCATCAATGACTTCACCACACG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGGGACAGCAGCAGGAGAAAGTTTCGCTGTaGATGATGCTGCATTGCTTT +
Preference number: 5 (lower is better)
Translates to: EFKPLSGLGRTFWLGQQQEKVSL*MMLHCF
Trigger: AAAGCAATGCAGCATCATCAACAGCGAAACTTTCTC...CTGCTGCTGTCCCAACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCAGGAATCGCAGTTTTaGTCTGAAGGTACTGATGCA +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATQESQF*SEGTDA
Trigger: TGCATCAGTACCTTCAGACAAAAACTGCGATTCCTG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTGGTGGACCCTGAGGTaGAGATGGACACAGACGATA +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEWWTLR*RWTQTI
Trigger: TATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACGTTTGCACTCATGAGTaGTCTCAGAGGAAGGCATGG +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHVCTHE*SQRKAW
Trigger: CCATGCCTTCCTCTGAGACAACTCATGAGTGCAAAC...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTCCGGACACCAATCTCTaGGATGGTAACATACATCTT +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATPDTNL*DGNIHL
Trigger: AAGATGTATGTTACCATCCAAGAGATTGGTGTCCGG...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTTCATCCTTTTTGTCATaGGTGCAAGTGCCGCACTGG +
Preference number: 5 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSSSFLS*VQVPHW
Trigger: CCAGTGCGGCACTTGCACCAATGACAAAAAGGATGA...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTACGCAGATTGAGTCATaGGTACTGAAAAGTGTCGTG +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVTQIES*VLKSVV
Trigger: CACGACACTTTTCAGTACCAATGACTCAATCTGCGT...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGATTCCTCTGAGAGGTTaGCAGCTCCTGGCAACACTC +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEIPLRG*QLLATL
Trigger: GAGTGTTGCCAGGAGCTGCAAACCTCTCAGAGGAAT...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTTCACTTTCCTTGGACTaGAACTCTTGTTCTGAGGAC +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVSLSLD*NSCSED
Trigger: GTCCTCAGAACAAGAGTTCAAGTCCAAGGAAAGTGA...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 90 bp CCATCTAGCCAATTGGTCCAATTGCAAAGCTCCTGTTTGCACTCATaGGTTGTTTCAGAGGAAGGCATGGTGGACCCTGAGGTTGAGATG +
Preference number: 5 (lower is better)
Translates to: PSSQLVQLQSSCLHS*VVSEEGMVDPEVEM
Trigger: CATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAAACAACTCATGAGTGCAAACAGGAGCTTTGCAATTGGACCAATTGGCTAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163321.3
CDS GCA 90 bp TTCTGCCAGACCCAGGGTAACTGCCATCTAGCCAATTGGTCCAATTaGAAAGCTCCTGTTTGCACTCATGAGTTGTTTCAGAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: FCQTQGNCHLANWSN*KAPVCTHELFQRKA
Trigger: TGCCTTCCTCTGAAACAACTCATGAGTGCAAACAGGAGCTTTGCAATTGGACCAATTGGCTAGATGGCAGTTACCCTGGGTCTGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTGTAGCCTGTACACATTaGCCCAAATCATCTAAGAAG +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVVACTH*PKSSKK
Trigger: CTTCTTAGATGATTTGGGCAAATGTGTACAGGCTAC...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAAGGCTTGTCTGTGCATaGCCACATCCTGTTCTCACA +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARRLVCA*PHPVLT
Trigger: TGTGAGAACAGGATGTGGCAATGCACAGACAAGCCT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTAAGTCATTGATGGCATaGTCATCAAAGTTCCCACAC +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATKSLMA*SSKFPH
Trigger: GTGTGGGAACTTTGATGACAATGCCATCAATGACTT...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTACTGCTTTTGGCACTaGGCAGATTGGGTAGCCATG +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEYCFWH*ADWVAM
Trigger: CATGGCTACCCAATCTGCCAAGTGCCAAAAGCAGTA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCAGAACTTGTATCCTTaGGATCTCAGGTTCACAAAG +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVQNLYP*DLRFTK
Trigger: CTTTGTGAACCTGAGATCCAAAGGATACAAGTTCTG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGAAGCTGTGGAACAGTaGTTTACCACTGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGAREAVEQ*FTTVQH
Trigger: GTGCTGCACAGTGGTAAACAACTGTTCCACAGCTTC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACTCACTGGTTGAGTGGTaGTGTGTGAAATACCTGAGG +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHSLVEW*CVKYLR
Trigger: CCTCAGGTATTTCACACACAACCACTCAACCAGTGA...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTCAGTGTCAAACCACTaGGTCCAGTTGCACTGTAGC +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPESVSNH*VQLHCS
Trigger: GCTACAGTGCAACTGGACCAAGTGGTTTGACACTGA...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CGGCAGGTAGGTAGAATTCAAGCCACTTTCTGGCCTCGGGAGGACCTTTTGGTTCTGACTACTTTGTTGTaGAAGATGATCTGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: RQVGRIQATFWPREDLLVLTTLL*KMIWLV
Trigger: GACCAACCAGATCATCTTCAACAACAAAGTAGTCAG...AACCAAAAGGTCCTCCCGAGGCCAGAAAGTGGCTTGAATTCTACCTACCTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTTGTTGGCAAACAAGTaGAAAGGCACCTCGACGGAG +
Preference number: 5 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWLLANK*KGTSTE
Trigger: CTCCGTCGAGGTGCCTTTCAACTTGTTTGCCAACAA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCACTGGCCCTCTGTGTaGTTGGCAAACAAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHHWPSV*LANKLK
Trigger: TTTCAACTTGTTTGCCAACAACACAGAGGGCCAGTG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTCATCCTTTTTGTCATaGGTGCAAGTGCCGCACTGG +
Preference number: 5 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWSSFLS*VQVPHW
Trigger: CCAGTGCGGCACTTGCACCAATGACAAAAAGGATGA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGTGAATGAGCAGGTGTaGTTGGTTTGGCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARVNEQV*LVWLLQ
Trigger: CTGGAGAAGCCAAACCAACAACACCTGCTCATTCAC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACTGGTCTTTCCTGTATaGGGTGAGCTGGTTTGGGTT +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARLVFPV*GELVWV
Trigger: AACCCAAACCAGCTCACCCAATACAGGAAAGACCAG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS TCA 90 bp TGTGAAATACCTGAGGTCCAGGTCTTTGTGTCTATGGTTGCTGAGTaGCTACTGGTGTCTTTTGTGGGAGAGGAATACACATGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: CEIPEVQVFVSMVAE*LLVSFVGEEYTWVV
Trigger: GACCACCCATGTGTATTCCTCTCCCACAAAAGACACCAGTAGTCACTCAGCAACCATAGACACAAAGACCTGGACCTCAGGTATTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 90 bp CCATCTAGCCAATTGGTCCAATTGCAAAGCTCCTGTTTGCACTCATaGGTTGTTTCAGAGGAAGGCATGGTGGACCCTGAGGTTGAGATA +
Preference number: 5 (lower is better)
Translates to: PSSQLVQLQSSCLHS*VVSEEGMVDPEVEI
Trigger: TATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAAACAACTCATGAGTGCAAACAGGAGCTTTGCAATTGGACCAATTGGCTAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CCA 90 bp AGGTCTTTGTGTCTATGGTTGCTGAGTGACTACTGGTGTCTTTTGTaGGAGAGGAATACACATGGGTGGTCCAGTTGGTCTCTGTTTTCG +
Preference number: 5 (lower is better)
Translates to: RSLCLWLLSDYWCLL*ERNTHGWSSWSLFS
Trigger: CGAAAACAGAGACCAACTGGACCACCCATGTGTATTCCTCTCCCACAAAAGACACCAGTAGTCACTCAGCAACCATAGACACAAAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCAGAGACCACAAGTCTaGTTGGTATATTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHQRPQV*LVYLVS
Trigger: GGACACCAAATATACCAACAAGACTTGTGGTCTCTG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGCTTCTCACAGAACTaGTATCCTTTGGATCTCAGG +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARGFSQN*YPLDLR
Trigger: CCTGAGATCCAAAGGATACAAGTTCTGTGAGAAGCC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACGACTACTGGTGTCTTTaGTGGGAGAGGAATACACAT +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHDYWCL*WERNTH
Trigger: ATGTGTATTCCTCTCCCACAAAAGACACCAGTAGTC...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCAGGACTGACTACTTaGTTGTTGAAGATGATCTGG +
Preference number: 5 (lower is better)
Translates to: DPWVIMKFFQKEPETTMSPGLTT*LLKMIW
Trigger: CCAGATCATCTTCAACAACAAAGTAGTCAGTCCTGG...AGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCCAGGACTGACTACTTaGTTGTTGAAGATGATCTGG +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHPGLTT*LLKMIW
Trigger: CCAGATCATCTTCAACAACAAAGTAGTCAGTCCTGG...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAACAAGGCTGGTATACTaGGTTATCAGGGCACGTGAA +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARTRLVY*VIRARE
Trigger: TTCACGTGCCCTGATAACCAAGTATACCAGCCTTGT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACACGCAGATTGAGTCATaGGTACTGAAAAGTGTCGTG +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHTQIES*VLKSVV
Trigger: CACGACACTTTTCAGTACCAATGACTCAATCTGCGT...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp GGGTCGATGTCCCTCTTGAAGAGGAAGCGGCAGGTAGGTAGAATTCAAGCCACTGACCATGAGTACATCTaGGAATTTCTCACACTTATG +
Preference number: 5 (lower is better)
Translates to: GSMSLLKRKRQVGRIQATDHEYI*EFLTLM
Trigger: CATAAGTGTGAGAAATTCCAAGATGTACTCATGGTC...AGTGGCTTGAATTCTACCTACCTGCCGCTTCCTCTTCAAGAGGGACATCGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 90 bp GTTGGCAAACAAGTTGAAAGGCACCTCGACGGAGAAGATGAGACCTaGAAACATGACCCGGACACCAATCTCTTGGATGGTAACATACAT +
Preference number: 5 (lower is better)
Translates to: VGKQVERHLDGEDET*KHDPDTNLLDGNIH
Trigger: ATGTATGTTACCATCCAAGAGATTGGTGTCCGGGTCATGTTTTCAGGTCTCATCTTCTCCGTCGAGGTGCCTTTCAACTTGTTTGCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp AACTTCCAGCTATTTCCAAACTCCAACATGTCACTGACCACGGACTaGCTGCGTGTGGTGAAGTCATTGATGGCATTGTCATCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: NFQLFPNSNMSLTTD*LRVVKSLMALSSKF
Trigger: GAACTTTGATGACAATGCCATCAATGACTTCACCACACGCAGCCAGTCCGTGGTCAGTGACATGTTGGAGTTTGGAAATAGCTGGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 90 bp CAGTGGTGTGTTGGGAAAGAACTGAGCCCTGCACTCAACATTTCGTaGCTTCTCACAGAACTTGTATCCTTTGGATCTCAGGTTCACAAA +
Preference number: 5 (lower is better)
Translates to: QWCVGKELSPALNIS*LLTELVSFGSQVHK
Trigger: TTTGTGAACCTGAGATCCAAAGGATACAAGTTCTGTGAGAAGCCACGAAATGTTGAGTGCAGGGCTCAGTTCTTTCCCAACACACCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGCGTGTGGTGAAGTCATaGATGGCATTGTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPERVVKS*MALSSK
Trigger: CTTTGATGACAATGCCATCAATGACTTCACCACACG...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACAGGAATCGCAGTTTTaGTCTGAAGGTACTGATGCA +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARQESQF*SEGTDA
Trigger: TGCATCAGTACCTTCAGACAAAAACTGCGATTCCTG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACTACTGGTGTCTTTaGTGGGAGAGGAATACACAT +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARDYWCL*WERNTH
Trigger: ATGTGTATTCCTCTCCCACAAAAGACACCAGTAGTC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGCCGGACACCAATCTCTaGGATGGTAACATACATCTT +
Preference number: 5 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWPDTNL*DGNIHL
Trigger: AAGATGTATGTTACCATCCAAGAGATTGGTGTCCGG...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAAGACCACAAGTCTTGTaGGTATATTTGGTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARRPQVL*VYLVSN
Trigger: GTTGGACACCAAATATACCAACAAGACTTGTGGTCT...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGAGACCACAAGTCTTGTaGGTATATTTGGTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWRPQVL*VYLVSN
Trigger: GTTGGACACCAAATATACCAACAAGACTTGTGGTCT...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGAGAAAGTTTCGCTGTaGATGATGCTGCATTGCTTT +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGAREKVSL*MMLHCF
Trigger: AAAGCAATGCAGCATCATCAACAGCGAAACTTTCTC...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp CTGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGACAGAACTTGTATCCTTaGGATCTCAGGTTCACAAAG +
Preference number: 5 (lower is better)
Translates to: LSFMGPLGDHEVLSKGARQNLYP*DLRFTK
Trigger: CTTTGTGAACCTGAGATCCAAAGGATACAAGTTCTG...TCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGCTGACTACTTTGTTGTaGAAGATGATCTGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWLTTLL*KMIWLV
Trigger: GACCAACCAGATCATCTTCAACAACAAAGTAGTCAG...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TGTCATTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGGGACTGACTACTTTGTaGTTGAAGATGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: CHSWDPWVIMKFFQKEPEGLTTL*LKMIWL
Trigger: CAACCAGATCATCTTCAACAACAAAGTAGTCAGTCC...CTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGGGACTGACTACTTTGTaGTTGAAGATGATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWGLTTL*LKMIWL
Trigger: CAACCAGATCATCTTCAACAACAAAGTAGTCAGTCC...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp TTCATGGGACCCTTGGGTGATCATGAAGTTCTTTCAAAAGGAGCCCGAGACCACGACCATGAGTACATCTaGGAATTTCTCACACTTATG +
Preference number: 5 (lower is better)
Translates to: FMGPLGDHEVLSKGARDHDHEYI*EFLTLM
Trigger: CATAAGTGTGAGAAATTCCAAGATGTACTCATGGTC...GTGGTCTCGGGCTCCTTTTGAAAGAACTTCATGATCACCCAAGGGTCCCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS-3UTR CAA 90 bp ATGAAGTTCTTTCAAAAGGAGCCCGAGACCACCATGTCTCCACCTAATCAGTGGTGTTCCTCACTTTCCTaGGACTTGAACTCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: MKFFQKEPETTMSPPNQWCSSLS*DLNSCS
Trigger: AGAACAAGAGTTCAAGTCCAAGGAAAGTGAGGAACA...CCACTGATTAGGTGGAGACATGGTGGTCTCGGGCTCCTTTTGAAAGAACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp GACAGACGTCCTGCCGGCAAGCCTCCACGTAGCTGCTaGTGTCCACCAGGGCCGCACAGCCTGAGAACAGCT +
Preference number: 6 (lower is better)
Translates to: DRRPAGKPPRSC*CPPGPHSLRTA
Trigger: AGCTGTTCTCAGGCTGTGCGGCCCTGGTGGACATCAGCAGCTACGTGGAGGCTTGCCGGCAGGACGTCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp GAGGCGGAGGGCAGTGGCTGGAGTTGCAGGCACAGCTaGACTGGGGACAACATTGGCCAGCCTCCAGGGCTA +
Preference number: 6 (lower is better)
Translates to: EAEGSGWSCRHS*TGDNIGQPPGL
Trigger: TAGCCCTGGAGGCTGGCCAATGTTGTCCCCAGTTCAGCTGTGCCTGCAACTCCAGCCACTGCCCTCCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GGAGGGCAGTGGCTGGAGTTGCAGGCACAGCTGAACTaGGGACAACATTGGCCAGCCTCCAGGGCTACAGGC +
Preference number: 6 (lower is better)
Translates to: GGQWLELQAQLN*GQHWPASRATG
Trigger: GCCTGTAGCCCTGGAGGCTGGCCAATGTTGTCCCCAGTTCAGCTGTGCCTGCAACTCCAGCCACTGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp CCGCTAACTGGCCTGCGGGTCAGCACCACACGGTCCTaGTGGTACTCCACAATGATGGACTGTGGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: PLTGLRVSTTRS*WYSTMMDCGQE
Trigger: CTCCTGCCCACAGTCCATCATTGTGGAGTACCACCAGGACCGTGTGGTGCTGACCCGCAGGCCAGTTAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp GGGTCAGCACCACACGGTCCTGGTGGTACTCCACAATaGTGGACTGTGGGCAGGAGACGCTGTCTCCCACGT +
Preference number: 6 (lower is better)
Translates to: GSAPHGPGGTPQ*WTVGRRRCLPR
Trigger: ACGTGGGAGACAGCGTCTCCTGCCCACAGTCCATCATTGTGGAGTACCACCAGGACCGTGTGGTGCTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp GGCACTGGCACAAAGCCAGGCTCTGGACAGGTGGGCTaGGGACAGGCCTTCTTTTGGCAGGTTAGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: GTGTKPGSGQVG*GQAFFWQVSVA
Trigger: AGCCACGCTAACCTGCCAAAAGAAGGCCTGTCCTCAGCCCACCTGTCCAGAGCCTGGCTTTGTGCCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp CCCATTACTGAGCAGGTGCCAGCGCAGGGGATGTCCTaGCAGCTCCACTGCCCTCCAGAACATGTGTTGGTG +
Preference number: 6 (lower is better)
Translates to: PITEQVPAQGMS*QLHCPPEHVLV
Trigger: CACCAACACATGTTCTGGAGGGCAGTGGAGCTGCCAGGACATCCCCTGCGCTGGCACCTGCTCAGTAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000163321.3
CDS CCA 72 bp CCCATTACTGAGCAGGTGCCAGCGCAGGGGATGTCCTaGCAGCTCCACTGCCCTCCAGAACATGTGCACTTG +
Preference number: 6 (lower is better)
Translates to: PITEQVPAQGMS*QLHCPPEHVHL
Trigger: CAAGTGCACATGTTCTGGAGGGCAGTGGAGCTGCCAGGACATCCCCTGCGCTGGCACCTGCTCAGTAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS TCA 72 bp GGCTGGAATGTGTGCTGGAGGGTTGCATTGAGGTCATaGCGGGCGGTGTGGAGAAGGAGAAAGTGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: GWNVCWRVALRS*RAVWRRRKWWG
Trigger: CCCCCACCACTTTCTCCTTCTCCACACCGCCCGTCATGACCTCAATGCAACCCTCCAGCACACATTCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp TGGCCTGACACGCTGCAGAAGCAGGGAGTGGTAGAGTaGACCCTATGGCTGGTCGACAAGGACGGGGACACA +
Preference number: 6 (lower is better)
Translates to: WPDTLQKQGVVE*TLWLVDKDGDT
Trigger: TGTGTCCCCGTCCTTGTCGACCAGCCATAGGGTTCACTCTACCACTCCCTGCTTCTGCAGCGTGTCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp GCTCCTTGGGTGCAGGTGCAAATGGCCCCACTGTCCTaGACAGACTCGCCATTGGGAACTGTGGATCCCTTG +
Preference number: 6 (lower is better)
Translates to: APWVQVQMAPLS*TDSPLGTVDPL
Trigger: CAAGGGATCCACAGTTCCCAATGGCGAGTCTGTGCAGGACAGTGGGGCCATTTGCACCTGCACCCAAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GTTGCCCCATGTGCTGCACACCCGCCTGGTATGTCCTaGGTTGAAGGCTCGTACCACAGGGATGGTCTTCAG +
Preference number: 6 (lower is better)
Translates to: VAPCAAHPPGMS*VEGSYHRDGLQ
Trigger: CTGAAGACCATCCCTGTGGTACGAGCCTTCAACCCAGGACATACCAGGCGGGTGTGCAGCACATGGGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GCATGTGCACACTGCCGGGAGTACTCAGCGAGGGTATaGCAGATGCAGTCAGACGGGTCCAAGCTCTCACAG +
Preference number: 6 (lower is better)
Translates to: ACAHCREYSARV*QMQSDGSKLSQ
Trigger: CTGTGAGAGCTTGGACCCGTCTGACTGCATCTGCCATACCCTCGCTGAGTACTCCCGGCAGTGTGCACATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GGTGCTGGGGTTCACGGTGGCGTGGCACTGGGAAAATaGACCACTGGCGTTAGTCAGCAGAGAACACCAGTG +
Preference number: 6 (lower is better)
Translates to: GAGVHGGVALGK*TTGVSQQRTPV
Trigger: CACTGGTGTTCTCTGCTGACTAACGCCAGTGGTCCATTTTCCCAGTGCCACGCCACCGTGAACCCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GGGTGGTGGAGTTGCAGGTGTCAACGCTCCTCTCGATaGTACCATTGGCCCTGCAGTGTGCAGAGATGCAGC +
Preference number: 6 (lower is better)
Translates to: GWWSCRCQRSSR*YHWPCSVQRCS
Trigger: GCTGCATCTCTGCACACTGCAGGGCCAATGGTACCATCGAGAGGAGCGTTGACACCTGCAACTCCACCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp CTGGAGTTGCAGGCACAGCTGAACTGGGGACAACATTaGCCAGCCTCCAGGGCTACAGGCACTGGCACAAAG +
Preference number: 6 (lower is better)
Translates to: LELQAQLNWGQH*PASRATGTGTK
Trigger: CTTTGTGCCAGTGCCTGTAGCCCTGGAGGCTGGCCAATGTTGTCCCCAGTTCAGCTGTGCCTGCAACTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp CTAGAATTCTTCGGGCAGTGCAGAGGCGGAGGGCAGTaGCTGGAGTTGCAGGCACAGCTGAACTGGGGACAA +
Preference number: 6 (lower is better)
Translates to: LEFFGQCRGGGQ*LELQAQLNWGQ
Trigger: TTGTCCCCAGTTCAGCTGTGCCTGCAACTCCAGCCACTGCCCTCCGCCTCTGCACTGCCCGAAGAATTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp GCTGGAGTTGCAGGCACAGCTGAACTGGGGACAACATaGGCCAGCCTCCAGGGCTACAGGCACTGGCACAAA +
Preference number: 6 (lower is better)
Translates to: AGVAGTAELGTT*ASLQGYRHWHK
Trigger: TTTGTGCCAGTGCCTGTAGCCCTGGAGGCTGGCCAATGTTGTCCCCAGTTCAGCTGTGCCTGCAACTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp CAGGGAGTACATGGAGATGCTGTCCCCGCAGTTGCCTaGGCAGTAGGAGATGCTCACTGGGCCCTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: QGVHGDAVPAVA*AVGDAHWALRA
Trigger: AGCTCTGAGGGCCCAGTGAGCATCTCCTACTGCCAAGGCAACTGCGGGGACAGCATCTCCATGTACTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp GTTGGCCTCCAGGGAGTACATGGAGATGCTGTCCCCGCAGTTGCCTaGGCAGTAGGAGATGCTCACTGGGCCCTCAGAGCTGCAGTTTTG +
Preference number: 6 (lower is better)
Translates to: VGLQGVHGDAVPAVA*AVGDAHWALRAAVL
Trigger: CAAAACTGCAGCTCTGAGGGCCCAGTGAGCATCTCCTACTGCCAAGGCAACTGCGGGGACAGCATCTCCATGTACTCCCTGGAGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp ACCACTGAAGTTGGAGTTGGTGGAGGCCCTTGGCAGGAAGGCTGGTaGGGCACCTTCCAGTGGAGGGACATCTCAGAACAAGAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: TTEVGVGGGPWQEGW*GTFQWRDISEQEEA
Trigger: AGCCTCCTCTTGTTCTGAGATGTCCCTCCACTGGAAGGTGCCCAACCAGCCTTCCTGCCAAGGGCCTCCACCAACTCCAACTTCAGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp GGACAGAAGCAGCCCTCTGTCTTGGGACCAGCCTCTTaGAGGGTCAGGCTTGGGCTGATGCTATCATCCCTG +
Preference number: 6 (lower is better)
Translates to: GQKQPSVLGPAS*RVRLGLMLSSL
Trigger: CAGGGATGATAGCATCAGCCCAAGCCTGACCCTTCAAGAGGCTGGTCCCAAGACAGAGGGCTGCTTCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp CACACTGCCGGGAGTACTCAGCGAGGGTATGGCAGATaGAGTCAGACGGGTCCAAGCTCTCACAGAGACAGA +
Preference number: 6 (lower is better)
Translates to: HTAGSTQRGYGR*SQTGPSSHRDR
Trigger: TCTGTCTCTGTGAGAGCTTGGACCCGTCTGACTGCATCTGCCATACCCTCGCTGAGTACTCCCGGCAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp CAGGTGTCCACACAGGGTGAGCCACATTCCTGGTGCTaGATGTTGAGGGGACATGTCTGGGAGCAGAGGTTG +
Preference number: 6 (lower is better)
Translates to: QVSTQGEPHSWC*MLRGHVWEQRL
Trigger: CAACCTCTGCTCCCAGACATGTCCCCTCAACATGCAGCACCAGGAATGTGGCTCACCCTGTGTGGACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp CTCGGTGACAGAGTCTCTCTCCGCTCCTCTCAATGTTaGTATAGGTTTCCAGGTCCCCTCCATGTGGCCCGG +
Preference number: 6 (lower is better)
Translates to: LGDRVSLRSSQC*YRFPGPLHVAR
Trigger: CCGGGCCACATGGAGGGGACCTGGAAACCTATAGCAACATTGAGAGGAGCGGAGAGAGACTCTGTCACCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp AGATGCTGTCCCCGCAGTTGCCTTGGCAGTAGGAGATaGTCACTGGGCCCTCAGAGCTGCAGTTTTGCTGAC +
Preference number: 6 (lower is better)
Translates to: RCCPRSCLGSRR*SLGPQSCSFAD
Trigger: GTCAGCAAAACTGCAGCTCTGAGGGCCCAGTGAGCATCTCCTACTGCCAAGGCAACTGCGGGGACAGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp TCGGCTGCAGGTCACATTCTGCCCCAGCTCCTCCAGTaGTGTGTTGGGAAAGAACTGAGCCCTGCACTCAAC +
Preference number: 6 (lower is better)
Translates to: SAAGHILPQLLQ*CVGKELSPALN
Trigger: GTTGAGTGCAGGGCTCAGTTCTTTCCCAACACACCACTGGAGGAGCTGGGGCAGAATGTGACCTGCAGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GTTGAAGATGATCTGGTTGGTCATGACCCCGCTAACTaGCCTGCGGGTCAGCACCACACGGTCCTGGTGGTA +
Preference number: 6 (lower is better)
Translates to: VEDDLVGHDPAN*PAGQHHTVLVV
Trigger: TACCACCAGGACCGTGTGGTGCTGACCCGCAGGCCAGTTAGCGGGGTCATGACCAACCAGATCATCTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GGCCCTTGGCAGGAAGGCTGGTTGGGCACCTTCCAGTaGAGGGACATCTCAGAACAAGAGGAGGCTATGGAA +
Preference number: 6 (lower is better)
Translates to: GPWQEGWLGTFQ*RDISEQEEAME
Trigger: TTCCATAGCCTCCTCTTGTTCTGAGATGTCCCTCCACTGGAAGGTGCCCAACCAGCCTTCCTGCCAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp TTGGAGTTGGTGGAGGCCCTTGGCAGGAAGGCTGGTTaGGCACCTTCCAGTGGAGGGACATCTCAGAACAAG +
Preference number: 6 (lower is better)
Translates to: LELVEALGRKAG*APSSGGTSQNK
Trigger: CTTGTTCTGAGATGTCCCTCCACTGGAAGGTGCCCAACCAGCCTTCCTGCCAAGGGCCTCCACCAACTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GAAGTTGGAGTTGGTGGAGGCCCTTGGCAGGAAGGCTaGTTGGGCACCTTCCAGTGGAGGGACATCTCAGAA +
Preference number: 6 (lower is better)
Translates to: EVGVGGGPWQEG*LGTFQWRDISE
Trigger: TTCTGAGATGTCCCTCCACTGGAAGGTGCCCAACCAGCCTTCCTGCCAAGGGCCTCCACCAACTCCAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GCTCCTGGCAACACTCACATGTGTGCTCTACCTTGTTaGCCTCCAGGGAGTACATGGAGATGCTGTCCCCGC +
Preference number: 6 (lower is better)
Translates to: APGNTHMCALPC*PPGSTWRCCPR
Trigger: GCGGGGACAGCATCTCCATGTACTCCCTGGAGGCCAACAAGGTAGAGCACACATGTGAGTGTTGCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp GCTAGCCTCAGCACGGCACTCTACTGCTTTTGGCACTaGGCAGATTGGGTAGCCATGGGCACGGAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: ASLSTALYCFWH*ADWVAMGTEVL
Trigger: GAGAACCTCCGTGCCCATGGCTACCCAATCTGCCAAGTGCCAAAAGCAGTAGAGTGCCGTGCTGAGGCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp AGTTGTCGCAGGGGGTGGCATGGTGGAGGGGCAGTCTaGACTAACCCTCTTGACCACCTGACAATCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SCRRGWHGGGAV*TNPLDHLTILA
Trigger: AGCCAGGATTGTCAGGTGGTCAAGAGGGTTAGTCAAGACTGCCCCTCCACCATGCCACCCCCTGCGACAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp GGTTCATTCAGCTCTGGGCACTGGCGTGGGCTCAAGGAGATGACATaGTTGCCCTCACAGGTGGCTTGGGAACAATTCGGCATTGGCCAG +
Preference number: 6 (lower is better)
Translates to: GSFSSGHWRGLKEMT*LPSQVAWEQFGIGQ
Trigger: CTGGCCAATGCCGAATTGTTCCCAAGCCACCTGTGAGGGCAACAATGTCATCTCCTTGAGCCCACGCCAGTGCCCAGAGCTGAATGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp CGTGCTGTCTGGACAGAAGCAGCCCTCTGTCTTGGGACCAGCCTCTaGAAGGGTCAGGCTTGGGCTGATGCTATCATCCCTGTAGCAGTA +
Preference number: 6 (lower is better)
Translates to: RAVWTEAALCLGTSL*KGQAWADAIIPVAV
Trigger: TACTGCTACAGGGATGATAGCATCAGCCCAAGCCTGACCCTTCAAGAGGCTGGTCCCAAGACAGAGGGCTGCTTCTGTCCAGACAGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp GAGGTTTGCAGCTCCTGGCAACACTCACATGTGTGCTCTACCTTGTaGGCCTCCAGGGAGTACATGGAGATGCTGTCCCCGCAGTTGCCT +
Preference number: 6 (lower is better)
Translates to: EVCSSWQHSHVCSTL*ASREYMEMLSPQLP
Trigger: AGGCAACTGCGGGGACAGCATCTCCATGTACTCCCTGGAGGCCAACAAGGTAGAGCACACATGTGAGTGTTGCCAGGAGCTGCAAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp GGGCAGGACCTCCAATACAAGTTAGTGCTCCTTGGGTaGAGGTGCAAATGGCCCCACTGTCCTGCACAGACT +
Preference number: 6 (lower is better)
Translates to: GQDLQYKLVLLG*RCKWPHCPAQT
Trigger: AGTCTGTGCAGGACAGTGGGGCCATTTGCACCTGCACCCAAGGAGCACTAACTTGTATTGGAGGTCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp CAGATCAAACCCTCCTCTCGGCTGCAGGTCACATTCTaGCCCAGCTCCTCCAGTGGTGTGTTGGGAAAGAAC +
Preference number: 6 (lower is better)
Translates to: QIKPSSRLQVTF*PSSSSGVLGKN
Trigger: GTTCTTTCCCAACACACCACTGGAGGAGCTGGGGCAGAATGTGACCTGCAGCCGAGAGGAGGGTTTGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp CTGTATTGGGTGAGCTGGTTTGGGGTGTTGAGGGGGTaGTGCCCTTTCCTGTATTGGGTGAGCTGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: LYWVSWFGVLRG*CPFLYWVSWFG
Trigger: CCCAAACCAGCTCACCCAATACAGGAAAGGGCAGCACCCCCTCAACACCCCAAACCAGCTCACCCAATACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CCA 72 bp CTGCATTGTGCCCTCATCAAAGATGGGGGCTGTTGGTaGGCACTTGGGATAGCATCCTTCCAGACCACGGAG +
Preference number: 6 (lower is better)
Translates to: LHCALIKDGGCW*ALGIASFQTTE
Trigger: CTCCGTGGTCTGGAAGGATGCTATCCCAAGTGCCCACCAACAGCCCCCATCTTTGATGAGGGCACAATGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp AGCACGGCACTCTACTGCTTTTGGCACTTGGCAGATTaGGTAGCCATGGGCACGGAGGTTCTCCAGAGTGTC +
Preference number: 6 (lower is better)
Translates to: STALYCFWHLAD*VAMGTEVLQSV
Trigger: GACACTCTGGAGAACCTCCGTGCCCATGGCTACCCAATCTGCCAAGTGCCAAAAGCAGTAGAGTGCCGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp CACACGGTCCTGGTGGTACTCCACAATGATGGACTGTaGGCAGGAGACGCTGTCTCCCACGTCACAGTAGTA +
Preference number: 6 (lower is better)
Translates to: HTVLVVLHNDGL*AGDAVSHVTVV
Trigger: TACTACTGTGACGTGGGAGACAGCGTCTCCTGCCCACAGTCCATCATTGTGGAGTACCACCAGGACCGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp TGCTGGAAACCTCACACAGGCATCTCTCACATAGGCTaGAGGAGACCACGTCACCAGGCTGGTAGAGAGTCC +
Preference number: 6 (lower is better)
Translates to: CWKPHTGISHIG*RRPRHQAGRES
Trigger: GGACTCTCTACCAGCCTGGTGACGTGGTCTCCTCCAGCCTATGTGAGAGATGCCTGTGTGAGGTTTCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GGTATACACTTGCCACAGCACTGCCCTGGCATGGCCTaGTACTCAGAGCCCTTAGGACACTGGGTGTTACAG +
Preference number: 6 (lower is better)
Translates to: GIHLPQHCPGMA*YSEPLGHWVLQ
Trigger: CTGTAACACCCAGTGTCCTAAGGGCTCTGAGTACCAGGCCATGCCAGGGCAGTGCTGTGGCAAGTGTATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp CAGCACGGCACTCTACTGCTTTTGGCACTTGGCAGATaGGGTAGCCATGGGCACGGAGGTTCTCCAGAGTGT +
Preference number: 6 (lower is better)
Translates to: QHGTLLLLALGR*GSHGHGGSPEC
Trigger: ACACTCTGGAGAACCTCCGTGCCCATGGCTACCCAATCTGCCAAGTGCCAAAAGCAGTAGAGTGCCGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp AGCTCCTGGCAACACTCACATGTGTGCTCTACCTTGTaGGCCTCCAGGGAGTACATGGAGATGCTGTCCCCG +
Preference number: 6 (lower is better)
Translates to: SSWQHSHVCSTL*ASREYMEMLSP
Trigger: CGGGGACAGCATCTCCATGTACTCCCTGGAGGCCAACAAGGTAGAGCACACATGTGAGTGTTGCCAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp CGAGGCCCCAGACACCATTGGCAGGAAGGCACGCAGATTGAGTCATaGGTACTGAAAAGTGTCGTGCTGTCTGGACAGAAGCAGCCCTCT +
Preference number: 6 (lower is better)
Translates to: RGPRHHWQEGTQIES*VLKSVVLSGQKQPS
Trigger: AGAGGGCTGCTTCTGTCCAGACAGCACGACACTTTTCAGTACCAATGACTCAATCTGCGTGCCTTCCTGCCAATGGTGTCTGGGGCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp AGATGGTGCTGGTCTTTCCTGTATTGGGTGAGCTGGTATGGGGTGTaGAGGGGGTGCTGGCCTTTCCTGTATTGGGTGAGCTGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: RWCWSFLYWVSWYGV*RGCWPFLYWVSWFG
Trigger: CCCAAACCAGCTCACCCAATACAGGAAAGGCCAGCACCCCCTCAACACCCCATACCAGCTCACCCAATACAGGAAAGACCAGCACCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS TCA 72 bp CATTCAGCTCTGGGCACTGGCGTGGGCTCAAGGAGATaGCATTGTTGCCCTCACAGGTGGCTTGGGAACAAT +
Preference number: 6 (lower is better)
Translates to: HSALGTGVGSRR*HCCPHRWLGNN
Trigger: ATTGTTCCCAAGCCACCTGTGAGGGCAACAATGTCATCTCCTTGAGCCCACGCCAGTGCCCAGAGCTGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp CGTCTTCTCTCAGCTGAGCCTGGCCCTGCGGACAGTTaGTCTTGGGACACTCTGTCTTCATTGTCACGACCA +
Preference number: 6 (lower is better)
Translates to: RLLSAEPGPADS*SWDTLSSLSRP
Trigger: TGGTCGTGACAATGAAGACAGAGTGTCCCAAGATCAACTGTCCGCAGGGCCAGGCTCAGCTGAGAGAAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp CTGGAGCCATCATCGCAGCGCAGAGTCACATTCCTCTaGGAGGTTTGCAGCTCCTGGCAACACTCACATGTG +
Preference number: 6 (lower is better)
Translates to: LEPSSQRRVTFL*EVCSSWQHSHV
Trigger: CACATGTGAGTGTTGCCAGGAGCTGCAAACCTCTCAGAGGAATGTGACTCTGCGCTGCGATGATGGCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp AACGCTCCTCTCGATGGTACCATTGGCCCTGCAGTGTaGAGAGATGCAGCCTCCTATGCCATCTGTTGTGTG +
Preference number: 6 (lower is better)
Translates to: NAPLDGTIGPAV*RDAASYAICCV
Trigger: CACACAACAGATGGCATAGGAGGCTGCATCTCTGCACACTGCAGGGCCAATGGTACCATCGAGAGGAGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp CTGGAAAGGCCCAAGCATGTCCTCGCTGACCCTGAATaGCAACTGCTGGCCATGTTCCTCACTTTCCTTGGA +
Preference number: 6 (lower is better)
Translates to: LERPKHVLADPE*QLLAMFLTFLG
Trigger: TCCAAGGAAAGTGAGGAACATGGCCAGCAGTTGGCATTCAGGGTCAGCGAGGACATGCTTGGGCCTTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp TATTGGGTGAGCTGGTTTGGGGTGTTGAGGGGGTGCTaGCCTTTCCTGTATTGGGTGAGCTGGTTTGGGTTG +
Preference number: 6 (lower is better)
Translates to: YWVSWFGVLRGC*PFLYWVSWFGL
Trigger: CAACCCAAACCAGCTCACCCAATACAGGAAAGGGCAGCACCCCCTCAACACCCCAAACCAGCTCACCCAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CCA 72 bp AGCTCAATGAGGACCCCAGACTGGCTAAAGGGCAGCTaGACCGGGTGGTTATTGACTAAGACGGAGCTCTTG +
Preference number: 6 (lower is better)
Translates to: SSMRTPDWLKGS*TGWLLTKTELL
Trigger: CAAGAGCTCCGTCTTAGTCAATAACCACCCGGTCCAGCTGCCCTTTAGCCAGTCTGGGGTCCTCATTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp TGCACGTGTCATACATGCAGTTCGAGAAGAAGGTGCTaGGGTTCACGGTGGCGTGGCACTGGGAAAATGGAC +
Preference number: 6 (lower is better)
Translates to: CTCHTCSSRRRC*GSRWRGTGKMD
Trigger: GTCCATTTTCCCAGTGCCACGCCACCGTGAACCCCAGCACCTTCTTCTCGAACTGCATGTATGACACGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp ACACTGCATTGTGCCCTCATCAAAGATGGGGGCTGTTaGTGGGCACTTGGGATAGCATCCTTCCAGACCACG +
Preference number: 6 (lower is better)
Translates to: TLHCALIKDGGC*WALGIASFQTT
Trigger: CGTGGTCTGGAAGGATGCTATCCCAAGTGCCCACCAACAGCCCCCATCTTTGATGAGGGCACAATGCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp ACAATTCGGCATTGGCCAGGTCTCTCCTCTCAGTCTTaGAGGAAACACATTGCACCGATCCCGCCCAGTGAC +
Preference number: 6 (lower is better)
Translates to: TIRHWPGLSSQS*RKHIAPIPPSD
Trigger: GTCACTGGGCGGGATCGGTGCAATGTGTTTCCTCCAAGACTGAGAGGAGAGACCTGGCCAATGCCGAATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GTTGCCCTCACAGGTGGCTTGGGAACAATTCGGCATTaGCCAGGTCTCTCCTCTCAGTCTTGGAGGAAACAC +
Preference number: 6 (lower is better)
Translates to: VALTGGLGTIRH*PGLSSQSWRKH
Trigger: GTGTTTCCTCCAAGACTGAGAGGAGAGACCTGGCCAATGCCGAATTGTTCCCAAGCCACCTGTGAGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GGCACAAGATGGTTCATTCAGCTCTGGGCACTGGCGTaGGCTCAAGGAGATGACATTGTTGCCCTCACAGGT +
Preference number: 6 (lower is better)
Translates to: GTRWFIQLWALA*AQGDDIVALTG
Trigger: ACCTGTGAGGGCAACAATGTCATCTCCTTGAGCCCACGCCAGTGCCCAGAGCTGAATGAACCATCTTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp CCTGGCATGGCCTGGTACTCAGAGCCCTTAGGACACTaGGTGTTACAGAGCTCAGTCTCACAGCTGACCATA +
Preference number: 6 (lower is better)
Translates to: PGMAWYSEPLGH*VLQSSVSQLTI
Trigger: TATGGTCAGCTGTGAGACTGAGCTCTGTAACACCCAGTGTCCTAAGGGCTCTGAGTACCAGGCCATGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp TATTGGGTGAGCTGGTATGGGGTGTTGAGGGGGTGCTaGCCTTTCCTGTATTGGGTGAGCTGGTTTGGGTTG +
Preference number: 6 (lower is better)
Translates to: YWVSWYGVLRGC*PFLYWVSWFGL
Trigger: CAACCCAAACCAGCTCACCCAATACAGGAAAGGCCAGCACCCCCTCAACACCCCATACCAGCTCACCCAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CCA 72 bp TATTGGGTGAGCTGGTTTGGGGTGTTGAGGGGGTGCTaGCCTTTCCTGTATTGGGTGAGCTGGTTTGGGTTG +
Preference number: 6 (lower is better)
Translates to: YWVSWFGVLRGC*PFLYWVSWFGL
Trigger: CAACCCAAACCAGCTCACCCAATACAGGAAAGGCCAGCACCCCCTCAACACCCCAAACCAGCTCACCCAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CAA 72 bp TTCACAGACAATATGCTGCTGGTTGTCGATGCAGCCTaGCTTGAGGCCCCTGAGGACCCTACACTCGGGGTA +
Preference number: 6 (lower is better)
Translates to: FTDNMLLVVDAA*LEAPEDPTLGV
Trigger: TACCCCGAGTGTAGGGTCCTCAGGGGCCTCAAGCAAGGCTGCATCGACAACCAGCAGCATATTGTCTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp TGGTCTTTCCTGTATTGGGTGAGCTGGTATGGGGTGTaGAGGGGGTGCTGGCCTTTCCTGTATTGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: WSFLYWVSWYGV*RGCWPFLYWVS
Trigger: GCTCACCCAATACAGGAAAGGCCAGCACCCCCTCAACACCCCATACCAGCTCACCCAATACAGGAAAGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CAA 72 bp GTTTGGGGTGTTGAGGGGGTGCTGCCCTTTCCTGTATaGGGTGAGCTGGTTTGGGTTGTAGAGATGGTGCTG +
Preference number: 6 (lower is better)
Translates to: VWGVEGVLPFPV*GELVWVVEMVL
Trigger: CAGCACCATCTCTACAACCCAAACCAGCTCACCCAATACAGGAAAGGGCAGCACCCCCTCAACACCCCAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CAA 72 bp GTTTGGGTTGTAGAGGTGGTGCTGGTCTTTCCTGTATaGGGTGAGCTGGTTTGGGGTGTTGAGGGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: VWVVEVVLVFPV*GELVWGVEGVL
Trigger: CAGCACCCCCTCAACACCCCAAACCAGCTCACCCAATACAGGAAAGACCAGCACCACCTCTACAACCCAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CAA 90 bp TCCACAACCCCACTGATAGTCTGGAAGTCATCAGCCTGCATACTGTaGAAGTTACCACAGAGCCCACAGGTTAGCCCCCTGAGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: STTPLIVWKSSACIL*KLPQSPQVSPLSPG
Trigger: ACCTGGGCTCAGGGGGCTAACCTGTGGGCTCTGTGGTAACTTCAACAGTATGCAGGCTGATGACTTCCAGACTATCAGTGGGGTTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp GCCTTGGCAGTAGGAGATGCTCACTGGGCCCTCAGAGCTGCAGTTTaGCTGACGGATGATCTGCTGTCTTTGGTGCACCGTACATTTCTG +
Preference number: 6 (lower is better)
Translates to: ALAVGDAHWALRAAV*LTDDLLSLVHRTFL
Trigger: CAGAAATGTACGGTGCACCAAAGACAGCAGATCATCCGTCAGCAAAACTGCAGCTCTGAGGGCCCAGTGAGCATCTCCTACTGCCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp ACTGGAGCCATCATCGCAGCGCAGAGTCACATTCCTCTGAGAGGTTaGCAGCTCCTGGCAACACTCACATGTGTGCTCTACCTTGTTGGC +
Preference number: 6 (lower is better)
Translates to: TGAIIAAQSHIPLRG*QLLATLTCVLYLVG
Trigger: GCCAACAAGGTAGAGCACACATGTGAGTGTTGCCAGGAGCTGCAAACCTCTCAGAGGAATGTGACTCTGCGCTGCGATGATGGCTCCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp GGTGAGCTGGTTTGGGGTGTTGATGGGGTGCTGGCCTTTCCTGTATaGGGTGAGCTGGTTTGGGTTGTAGAGATGGTGCTGGTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: GELVWGVDGVLAFPV*GELVWVVEMVLVFP
Trigger: AGGAAAGACCAGCACCATCTCTACAACCCAAACCAGCTCACCCAATACAGGAAAGGCCAGCACCCCATCAACACCCCAAACCAGCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CAA 90 bp AGATGGTGCTGGTCTTTCCTGTATTGGGTGAGCTGGTTTGGGGTGTaGATGGGGTGCTGGCCTTTCCTGTATTGGGTGAGCTGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: RWCWSFLYWVSWFGV*MGCWPFLYWVSWFG
Trigger: CCCAAACCAGCTCACCCAATACAGGAAAGGCCAGCACCCCATCAACACCCCAAACCAGCTCACCCAATACAGGAAAGACCAGCACCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CAA 90 bp GGTGAGCTGGTTTGGGTTGTAGAGATGGTGCTGGTCTTTCCTGTATaGGGTGAGCTGGTTTGGGGTGTTGATGGGGTGCTGGCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: GELVWVVEMVLVFPV*GELVWGVDGVLAFP
Trigger: AGGAAAGGCCAGCACCCCATCAACACCCCAAACCAGCTCACCCAATACAGGAAAGACCAGCACCATCTCTACAACCCAAACCAGCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS TCA 72 bp GGACCACTGGCGTTAGTCAGCAGAGAACACCAGTGCTaGGCATACTTTTCATTCTCCACGCTGAGCGAGCAG +
Preference number: 6 (lower is better)
Translates to: GPLALVSREHQC*AYFSFSTLSEQ
Trigger: CTGCTCGCTCAGCGTGGAGAATGAAAAGTATGCTCAGCACTGGTGTTCTCTGCTGACTAACGCCAGTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp CAGTTGCACTGTAGCTGGCAGTGGGTGGTCACTGGTTaGGTGGTTGTGTGTGAAATACCTGAGGTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: QLHCSWQWVVTG*VVVCEIPEVQV
Trigger: GACCTGGACCTCAGGTATTTCACACACAACCACTCAACCAGTGACCACCCACTGCCAGCTACAGTGCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp GAGATGCTCACTGGGCCCTCAGAGCTGCAGTTTTGCTaGCGGATGATCTGCTGTCTTTGGTGCACCGTACAT +
Preference number: 6 (lower is better)
Translates to: EMLTGPSELQFC*RMICCLWCTVH
Trigger: ATGTACGGTGCACCAAAGACAGCAGATCATCCGTCAGCAAAACTGCAGCTCTGAGGGCCCAGTGAGCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp AGCCGCCTGAGTCTTGAAGGTGTTGAAGAAAGCAGCTaGTGTGCCCTCCACAACCCCACTGATAGTCTGGAA +
Preference number: 6 (lower is better)
Translates to: SRLSLEGVEESS*CALHNPTDSLE
Trigger: TTCCAGACTATCAGTGGGGTTGTGGAGGGCACAGCAGCTGCTTTCTTCAACACCTTCAAGACTCAGGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp AGTTGCACGTGTCATACATGCAGTTCGAGAAGAAGGTaGTGGGGTTCACGGTGGCGTGGCACTGGGAAAATG +
Preference number: 6 (lower is better)
Translates to: SCTCHTCSSRRR*WGSRWRGTGKM
Trigger: CATTTTCCCAGTGCCACGCCACCGTGAACCCCAGCACCTTCTTCTCGAACTGCATGTATGACACGTGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp TGCATTGCCACATCCTGTTCTCACAGGTGCAGTTGTTaGATCCCACTTGGATGGTCTCCCCAGGCCTATAGG +
Preference number: 6 (lower is better)
Translates to: CIATSCSHRCSC*IPLGWSPQAYR
Trigger: CCTATAGGCCTGGGGAGACCATCCAAGTGGGATGCAACAACTGCACCTGTGAGAACAGGATGTGGCAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp GCTTGTCTGTGCATTGCCACATCCTGTTCTCACAGGTaGAGTTGTTGCATCCCACTTGGATGGTCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: ACLCIATSCSHR*SCCIPLGWSPQ
Trigger: CTGGGGAGACCATCCAAGTGGGATGCAACAACTGCACCTGTGAGAACAGGATGTGGCAATGCACAGACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp ACAGCACAGGTGGCCAGGCAAGGCTTGTCTGTGCATTaGCACATCCTGTTCTCACAGGTGCAGTTGTTGCAT +
Preference number: 6 (lower is better)
Translates to: TAQVARQGLSVH*HILFSQVQLLH
Trigger: ATGCAACAACTGCACCTGTGAGAACAGGATGTGGCAATGCACAGACAAGCCTTGCCTGGCCACCTGTGCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp CGGCAGGGGAAGGTGACTGTACAGTTGGATACACACTaGATTGTGCCCTCATCAAAGATGGGGGCTGTTGGT +
Preference number: 6 (lower is better)
Translates to: RQGKVTVQLDTH*IVPSSKMGAVG
Trigger: ACCAACAGCCCCCATCTTTGATGAGGGCACAATGCAGTGTGTATCCAACTGTACAGTCACCTTCCCCTGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp GAGCTGGTTTGGGGCATGGAAGTACTGCTTGCTACATaGATGGAAGTGGTGCCAGGTGTTGAGCTGGTGACA +
Preference number: 6 (lower is better)
Translates to: ELVWGMEVLLAT*MEVVPGVELVT
Trigger: TGTCACCAGCTCAACACCTGGCACCACTTCCATGCATGTAGCAAGCAGTACTTCCATGCCCCAAACCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CCA 72 bp GGTCTTCAGAGGTGGGATGATGGTCACCCTATTGAGTaGGGTACCAACATGCCCTTGAGGGTGAGGAACATC +
Preference number: 6 (lower is better)
Translates to: GLQRWDDGHPIE*GTNMPLRVRNI
Trigger: GATGTTCCTCACCCTCAAGGGCATGTTGGTACCCCACTCAATAGGGTGACCATCATCCCACCTCTGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GTTGAAGGCTCGTACCACAGGGATGGTCTTCAGAGGTaGGATGATGGTCACCCTATTGAGTGGGGTACCAAC +
Preference number: 6 (lower is better)
Translates to: VEGSYHRDGLQR*DDGHPIEWGTN
Trigger: GTTGGTACCCCACTCAATAGGGTGACCATCATCCCACCTCTGAAGACCATCCCTGTGGTACGAGCCTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp CACCAGGTGTGGCATTGTGACAGTCAAAATAGATCATaGGTGCATCACACACTGGAGTCGGGGCAGGACCTC +
Preference number: 6 (lower is better)
Translates to: HQVWHCDSQNRS*VHHTLESGQDL
Trigger: GAGGTCCTGCCCCGACTCCAGTGTGTGATGCACCCATGATCTATTTTGACTGTCACAATGCCACACCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp CCATTGGCACAAGATGGTTCATTCAGCTCTGGGCACTaGCGTGGGCTCAAGGAGATGACATTGTTGCCCTCA +
Preference number: 6 (lower is better)
Translates to: PLAQDGSFSSGH*RGLKEMTLLPS
Trigger: TGAGGGCAACAATGTCATCTCCTTGAGCCCACGCCAGTGCCCAGAGCTGAATGAACCATCTTGTGCCAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp TTATCAGGGCACGTGAATGAGCAGGTGTTGTTGGTTTaGCTTCTCCAGGGAATGCACACGCCTTGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: LSGHVNEQVLLV*LLQGMHTPWAA
Trigger: TGCAGCCCAAGGCGTGTGCATTCCCTGGAGAAGCCAAACCAACAACACCTGCTCATTCACGTGCCCTGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp TCCTTGGACTTGAACTCTTGTTCTGAGGACTCTGCATaGCTTGTGTCCCCTAAAGCATGGCACTGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SLDLNSCSEDSA*LVSPKAWHCWP
Trigger: GGGCCAGCAGTGCCATGCTTTAGGGGACACAAGCCATGCAGAGTCCTCAGAACAAGAGTTCAAGTCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp CATCCTGTTCTCACAGGTGCAGTTGTTGCATCCCACTaGGATGGTCTCCCCAGGCCTATAGGTGGCCTCATT +
Preference number: 6 (lower is better)
Translates to: HPVLTGAVVASH*DGLPRPIGGLI
Trigger: AATGAGGCCACCTATAGGCCTGGGGAGACCATCCAAGTGGGATGCAACAACTGCACCTGTGAGAACAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp TCTGTGCATTGCCACATCCTGTTCTCACAGGTGCAGTaGTTGCATCCCACTTGGATGGTCTCCCCAGGCCTA +
Preference number: 6 (lower is better)
Translates to: SVHCHILFSQVQ*LHPTWMVSPGL
Trigger: TAGGCCTGGGGAGACCATCCAAGTGGGATGCAACAACTGCACCTGTGAGAACAGGATGTGGCAATGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp GAAGGTACTGATGCACCTGGCCGGTACAACTTTCCATaGACGCGGCAGGGGAAGGTGACTGTACAGTTGGAT +
Preference number: 6 (lower is better)
Translates to: EGTDAPGRYNFP*TRQGKVTVQLD
Trigger: ATCCAACTGTACAGTCACCTTCCCCTGCCGCGTCAATGGAAAGTTGTACCGGCCAGGTGCATCAGTACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp GAGTTGTCTCAGAGGAAGGCATGGTGGACCCTGAGGTaGAGATGGACACAGACGATATGGCTGGAGTTGGCT +
Preference number: 6 (lower is better)
Translates to: ELSQRKAWWTLR*RWTQTIWLELA
Trigger: AGCCAACTCCAGCCATATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAGACAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
CDS CAA 72 bp GTGCCGCACTGGCCCTCTGTGTTGTTGGCAAACAAGTaGAAAGGCACCTCGACGGAGAAGATGAGACCTGAA +
Preference number: 6 (lower is better)
Translates to: VPHWPSVLLANK*KGTSTEKMRPE
Trigger: TTCAGGTCTCATCTTCTCCGTCGAGGTGCCTTTCAACTTGTTTGCCAACAACACAGAGGGCCAGTGCGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp TCATTGGTGCAAGTGCCGCACTGGCCCTCTGTGTTGTaGGCAAACAAGTTGAAAGGCACCTCGACGGAGAAG +
Preference number: 6 (lower is better)
Translates to: SLVQVPHWPSVL*ANKLKGTSTEK
Trigger: CTTCTCCGTCGAGGTGCCTTTCAACTTGTTTGCCAACAACACAGAGGGCCAGTGCGGCACTTGCACCAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp GTTTGGGGTGTTGATGGGGTGCTGGCCTTTCCTGTATaGGGTGAGCTGGTTTGGGTTGTAGAGATGGTGCTG +
Preference number: 6 (lower is better)
Translates to: VWGVDGVLAFPV*GELVWVVEMVL
Trigger: CAGCACCATCTCTACAACCCAAACCAGCTCACCCAATACAGGAAAGGCCAGCACCCCATCAACACCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CAA 90 bp ATCTCCATACACAGCACAGGTGGCCAGGCAAGGCTTGTCTGTGCATaGCCACATCCTGTTCTCACAGGTGCAGTTGTTGCATCCCACTTG +
Preference number: 6 (lower is better)
Translates to: ISIHSTGGQARLVCA*PHPVLTGAVVASHL
Trigger: CAAGTGGGATGCAACAACTGCACCTGTGAGAACAGGATGTGGCAATGCACAGACAAGCCTTGCCTGGCCACCTGTGCTGTGTATGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp TGCACTCATGAGTTGTCTCAGAGGAAGGCATGGTGGACCCTGAGGTaGAGATGGACACAGACGATATGGCTGGAGTTGGCTCTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: CTHELSQRKAWWTLR*RWTQTIWLELALVL
Trigger: CAACACCAGAGCCAACTCCAGCCATATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAGACAACTCATGAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
CDS CAA 90 bp CAAGGCTGGTATACTTGGTTATCAGGGCACGTGAATGAGCAGGTGTaGTTGGTTTGGCTTCTCCAGGGAATGCACACGCCTTGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: QGWYTWLSGHVNEQV*LVWLLQGMHTPWAA
Trigger: TGCAGCCCAAGGCGTGTGCATTCCCTGGAGAAGCCAAACCAACAACACCTGCTCATTCACGTGCCCTGATAACCAAGTATACCAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp CCGTCAGTCCACACTTTCGCAGCTCAACCAGCACAGTaGAGGCATTACTGTCACAAGGCTTGCTCAGCACAT +
Preference number: 6 (lower is better)
Translates to: PSVHTFAAQPAQ*RHYCHKACSAH
Trigger: ATGTGCTGAGCAAGCCTTGTGACAGTAATGCCTTCACTGTGCTGGTTGAGCTGCGAAAGTGTGGACTGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp TCTCATTCAGAGCACGGCAGGTGGGCTGGCAGGTGCTaGTATGGTATTGATAGGTCATTGACTTGGGACAGG +
Preference number: 6 (lower is better)
Translates to: SHSEHGRWAGRC*YGIDRSLTWDR
Trigger: CCTGTCCCAAGTCAATGACCTATCAATACCATATCAGCACCTGCCAGCCCACCTGCCGTGCTCTGAATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp AGATGCAGCCTCCTATGCCATCTGTTGTGTGGTAGATaGTCTCCCCAGGATGGAACTGTTGCCCGTTGTAGG +
Preference number: 6 (lower is better)
Translates to: RCSLLCHLLCGR*SPQDGTVARCR
Trigger: CCTACAACGGGCAACAGTTCCATCCTGGGGAGATCATCTACCACACAACAGATGGCATAGGAGGCTGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp ATGAGCAGGTGTTGTTGGTTTGGCTTCTCCAGGGAATaGACACGCCTTGGGCTGCACAGAGTGATGCATAGA +
Preference number: 6 (lower is better)
Translates to: MSRCCWFGFSRE*TRLGLHRVMHR
Trigger: TCTATGCATCACTCTGTGCAGCCCAAGGCGTGTGCATTCCCTGGAGAAGCCAAACCAACAACACCTGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp AGTCCCCATGTACTGTGTACTGCCTTCCATCAAATGTaGACATGTGGGAGCCTCCCATTACTGAGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: SPHVLCTAFHQM*TCGSLPLLSRC
Trigger: GCACCTGCTCAGTAATGGGAGGCTCCCACATGTCCACATTTGATGGAAGGCAGTACACAGTACATGGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GAAGGCACTGAGGAAGAGGGAGACAGACCTGGGGTGTaGGTAGAAGAACCTGAGGTAACTGTACTGCTGTAT +
Preference number: 6 (lower is better)
Translates to: EGTEEEGDRPGV*VEEPEVTVLLY
Trigger: ATACAGCAGTACAGTTACCTCAGGTTCTTCTACCCACACCCCAGGTCTGTCTCCCTCTTCCTCAGTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp TGCACTGTAGCTGGCAGTGGGTGGTCACTGGTTGAGTaGTTGTGTGTGAAATACCTGAGGTCCAGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: CTVAGSGWSLVE*LCVKYLRSRSL
Trigger: CAAAGACCTGGACCTCAGGTATTTCACACACAACCACTCAACCAGTGACCACCCACTGCCAGCTACAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp AAGCCAGGACTGACTACTTTGTTGTTGAAGATGATCTaGTTGGTCATGACCCCGCTAACTGGCCTGCGGGTC +
Preference number: 6 (lower is better)
Translates to: KPGLTTLLLKMI*LVMTPLTGLRV
Trigger: GACCCGCAGGCCAGTTAGCGGGGTCATGACCAACCAGATCATCTTCAACAACAAAGTAGTCAGTCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp ATTGGACTCAGCTGGATCTCAAGCTGCAAACCCAGGTaGGTCTCACCAACGATGAAGAAGGTTGAAGGCCGG +
Preference number: 6 (lower is better)
Translates to: IGLSWISSCKPR*VSPTMKKVEGR
Trigger: CCGGCCTTCAACCTTCTTCATCGTTGGTGAGACCAACCTGGGTTTGCAGCTTGAGATCCAGCTGAGTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp ACACCACTCTCCGTGCAGATGCAGGAATCGCAGTTTTaGTCTGAAGGTACTGATGCACCTGGCCGGTACAAC +
Preference number: 6 (lower is better)
Translates to: TPLSVQMQESQF*SEGTDAPGRYN
Trigger: GTTGTACCGGCCAGGTGCATCAGTACCTTCAGACAAAAACTGCGATTCCTGCATCTGCACGGAGAGTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp ATCATCGCAGCGCAGAGTCACATTCCTCTGAGAGGTTaGCAGCTCCTGGCAACACTCACATGTGTGCTCTAC +
Preference number: 6 (lower is better)
Translates to: IIAAQSHIPLRG*QLLATLTCVLY
Trigger: GTAGAGCACACATGTGAGTGTTGCCAGGAGCTGCAAACCTCTCAGAGGAATGTGACTCTGCGCTGCGATGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp TATTGGGTGAGCTGGTTTGGGGCATGGAAGTACTGCTaGCTACATGCATGGAAGTGGTGCCAGGTGTTGAGC +
Preference number: 6 (lower is better)
Translates to: YWVSWFGAWKYC*LHAWKWCQVLS
Trigger: GCTCAACACCTGGCACCACTTCCATGCATGTAGCAAGCAGTACTTCCATGCCCCAAACCAGCTCACCCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CAA 72 bp GAGTTGTTTCAGAGGAAGGCATGGTGGACCCTGAGGTaGAGATGGACACAGACGATATGGCTGGAGTTGGCT +
Preference number: 6 (lower is better)
Translates to: ELFQRKAWWTLR*RWTQTIWLELA
Trigger: AGCCAACTCCAGCCATATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAAACAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163321.3
CDS CAA 90 bp CGGTACAACTTTCCATTGACGCGGCAGGGGAAGGTGACTGTACAGTaGGATACACACTGCATTGTGCCCTCATCAAAGATGGGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: RYNFPLTRQGKVTVQ*DTHCIVPSSKMGAV
Trigger: AACAGCCCCCATCTTTGATGAGGGCACAATGCAGTGTGTATCCAACTGTACAGTCACCTTCCCCTGCCGCGTCAATGGAAAGTTGTACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp GTACAGCGCACACCACTCTCCGTGCAGATGCAGGAATCGCAGTTTTaGTCTGAAGGTACTGATGCACCTGGCCGGTACAACTTTCCATTG +
Preference number: 6 (lower is better)
Translates to: VQRTPLSVQMQESQF*SEGTDAPGRYNFPL
Trigger: CAATGGAAAGTTGTACCGGCCAGGTGCATCAGTACCTTCAGACAAAAACTGCGATTCCTGCATCTGCACGGAGAGTGGTGTGCGCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp GTGACAATGCCATTCTGCTGGAAGCCAGGACTGACTACTTTGTTGTaGAAGATGATCTGGTTGGTCATGACCCCGCTAACTGGCCTGCGG +
Preference number: 6 (lower is better)
Translates to: VTMPFCWKPGLTTLL*KMIWLVMTPLTGLR
Trigger: CCGCAGGCCAGTTAGCGGGGTCATGACCAACCAGATCATCTTCAACAACAAAGTAGTCAGTCCTGGCTTCCAGCAGAATGGCATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp CGGGAGGTGACAATGCCATTCTGCTGGAAGCCAGGACTGACTACTTaGTTGTTGAAGATGATCTGGTTGGTCATGACCCCGCTAACTGGC +
Preference number: 6 (lower is better)
Translates to: REVTMPFCWKPGLTT*LLKMIWLVMTPLTG
Trigger: GCCAGTTAGCGGGGTCATGACCAACCAGATCATCTTCAACAACAAAGTAGTCAGTCCTGGCTTCCAGCAGAATGGCATTGTCACCTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp TTGGTGCAAGTGCCGCACTGGCCCTCTGTGTTGTTGGCAAACAAGTaGAAAGGCACCTCGACGGAGAAGATGAGACCTGAAAACATGACC +
Preference number: 6 (lower is better)
Translates to: LVQVPHWPSVLLANK*KGTSTEKMRPENMT
Trigger: GGTCATGTTTTCAGGTCTCATCTTCTCCGTCGAGGTGCCTTTCAACTTGTTTGCCAACAACACAGAGGGCCAGTGCGGCACTTGCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp CAGAGCTCAGTCTCACAGCTGACCATAAAGACATCGGAAAGGGGATaGCTGGAAACCTCACACAGGCATCTCTCACATAGGCTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: QSSVSQLTIKTSERG*LETSHRHLSHRLEE
Trigger: CTCCTCCAGCCTATGTGAGAGATGCCTGTGTGAGGTTTCCAGCAATCCCCTTTCCGATGTCTTTATGGTCAGCTGTGAGACTGAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp TCGCTGACCCTGAATGCCAACTGCTGGCCATGTTCCTCACTTTCCTaGGACTTGAACTCTTGTTCTGAGGACTCTGCATGGCTTGTGTCC +
Preference number: 6 (lower is better)
Translates to: SLTLNANCWPCSSLS*DLNSCSEDSAWLVS
Trigger: GGACACAAGCCATGCAGAGTCCTCAGAACAAGAGTTCAAGTCCAAGGAAAGTGAGGAACATGGCCAGCAGTTGGCATTCAGGGTCAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp TGCACTCATGAGTTGTTTCAGAGGAAGGCATGGTGGACCCTGAGGTaGAGATGGACACAGACGATATGGCTGGAGTTGGCTCTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: CTHELFQRKAWWTLR*RWTQTIWLELALVL
Trigger: CAACACCAGAGCCAACTCCAGCCATATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAAACAACTCATGAGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163321.3
CDS CAA 90 bp TTTTTGTCTGAAGGTACTGATGCACCTGGCCGGTACAACTTTCCATaGACGCGGCAGGGGAAGGTGACTGTACAGTTGGATACACACTGC +
Preference number: 6 (lower is better)
Translates to: FLSEGTDAPGRYNFP*TRQGKVTVQLDTHC
Trigger: GCAGTGTGTATCCAACTGTACAGTCACCTTCCCCTGCCGCGTCAATGGAAAGTTGTACCGGCCAGGTGCATCAGTACCTTCAGACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp TATGCCATCTGTTGTGTGGTAGATGATCTCCCCAGGATGGAACTGTaGCCCGTTGTAGGTACAGACACAGGCACCAGCATTGTGGGTACA +
Preference number: 6 (lower is better)
Translates to: YAICCVVDDLPRMEL*PVVGTDTGTSIVGT
Trigger: TGTACCCACAATGCTGGTGCCTGTGTCTGTACCTACAACGGGCAACAGTTCCATCCTGGGGAGATCATCTACCACACAACAGATGGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp CTACTGGTGTCTTTTGTGGGAGAGGAATACACATGGGTGGTCCAGTaGGTCTCTGTTTTCGTGCTGACTCCATGTGAGGTGGGATGTGTG +
Preference number: 6 (lower is better)
Translates to: LLVSFVGEEYTWVVQ*VSVFVLTPCEVGCV
Trigger: CACACATCCCACCTCACATGGAGTCAGCACGAAAACAGAGACCAACTGGACCACCCATGTGTATTCCTCTCCCACAAAAGACACCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp GAGGTGACAATGCCATTCTGCTGGAAGCCAGGACTGACTACTTTGTaGTTGAAGATGATCTGGTTGGTCATGACCCCGCTAACTGGCCTG +
Preference number: 6 (lower is better)
Translates to: EVTMPFCWKPGLTTL*LKMIWLVMTPLTGL
Trigger: CAGGCCAGTTAGCGGGGTCATGACCAACCAGATCATCTTCAACAACAAAGTAGTCAGTCCTGGCTTCCAGCAGAATGGCATTGTCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp TCCTTTTTGTCATTGGTGCAAGTGCCGCACTGGCCCTCTGTGTTGTaGGCAAACAAGTTGAAAGGCACCTCGACGGAGAAGATGAGACCT +
Preference number: 6 (lower is better)
Translates to: SFLSLVQVPHWPSVL*ANKLKGTSTEKMRP
Trigger: AGGTCTCATCTTCTCCGTCGAGGTGCCTTTCAACTTGTTTGCCAACAACACAGAGGGCCAGTGCGGCACTTGCACCAATGACAAAAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp CAAACCCAGGTTGGTCTCACCAACGATGAAGAAGGTTaGAGGCCGGAAGAAGGTAGCATTGGCTGTAGACAC +
Preference number: 6 (lower is better)
Translates to: QTQVGLTNDEEG*RPEEGSIGCRH
Trigger: GTGTCTACAGCCAATGCTACCTTCTTCCGGCCTTCAACCTTCTTCATCGTTGGTGAGACCAACCTGGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp GCACTGGACTTTGATCTGGTAGTTGTCACAGAGCCCTaGCAGCTGATCACTGTTGTAACAGATCAGCCCCAC +
Preference number: 6 (lower is better)
Translates to: ALDFDLVVVTEP*QLITVVTDQPH
Trigger: GTGGGGCTGATCTGTTACAACAGTGATCAGCTGTCAGGGCTCTGTGACAACTACCAGATCAAAGTCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp TTAGCCCTGCATTGCAACTGTGTGATCTCCTCTCGGTaGCAGAGTCTCTCTCCGCTCCTCTCAATGTTGCTA +
Preference number: 6 (lower is better)
Translates to: LALHCNCVISSR*QSLSPLLSMLL
Trigger: TAGCAACATTGAGAGGAGCGGAGAGAGACTCTGTCACCGAGAGGAGATCACACAGTTGCAATGCAGGGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp GGTTGTAGAGGTGGTGCTGGTCTTTCCTGTATTGGGTaGGCTGGTTTGGGTTGTAGAGATGGTGCTGGTCTT +
Preference number: 6 (lower is better)
Translates to: GCRGGAGLSCIG*AGLGCRDGAGL
Trigger: AAGACCAGCACCATCTCTACAACCCAAACCAGCTCACCCAATACAGGAAAGACCAGCACCACCTCTACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS GCA 72 bp AGGTGTGGCATTGTGACAGTCAAAATAGATCATGGGTaGATCACACACTGGAGTCGGGGCAGGACCTCCAAT +
Preference number: 6 (lower is better)
Translates to: RCGIVTVKIDHG*ITHWSRGRTSN
Trigger: ATTGGAGGTCCTGCCCCGACTCCAGTGTGTGATGCACCCATGATCTATTTTGACTGTCACAATGCCACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp GCACTTGGTGCAGTCAGTAGAGTAATTGGTACCCGGTaGATAAAGTGTCCCATTGTACAGGCAGGCACACTG +
Preference number: 6 (lower is better)
Translates to: ALGAVSRVIGTR*IKCPIVQAGTL
Trigger: CAGTGTGCCTGCCTGTACAATGGGACACTTTATGCACCGGGTACCAATTACTCTACTGACTGCACCAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CCA 72 bp AGTTGGATACACACTGCATTGTGCCCTCATCAAAGATaGGGGCTGTTGGTGGGCACTTGGGATAGCATCCTT +
Preference number: 6 (lower is better)
Translates to: SWIHTALCPHQR*GLLVGTWDSIL
Trigger: AAGGATGCTATCCCAAGTGCCCACCAACAGCCCCCATCTTTGATGAGGGCACAATGCAGTGTGTATCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GTTTGCACTCATGAGTTGTCTCAGAGGAAGGCATGGTaGACCCTGAGGTTGAGATGGACACAGACGATATGG +
Preference number: 6 (lower is better)
Translates to: VCTHELSQRKAW*TLRLRWTQTIW
Trigger: CCATATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAGACAACTCATGAGTGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
CDS CCA 72 bp CCTGTTTGCACTCATGAGTTGTCTCAGAGGAAGGCATaGTGGACCCTGAGGTTGAGATGGACACAGACGATA +
Preference number: 6 (lower is better)
Translates to: PVCTHELSQRKA*WTLRLRWTQTI
Trigger: TATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAGACAACTCATGAGTGCAAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
CDS CCA 72 bp ATGGTGCTGGCCTTTCCTGTATTGGGTGAGCTGGTTTaGGTTGTAGAGGTGGTGCTGGTCTTTCCTGTATTG +
Preference number: 6 (lower is better)
Translates to: MVLAFPVLGELV*VVEVVLVFPVL
Trigger: CAATACAGGAAAGACCAGCACCACCTCTACAACCCAAACCAGCTCACCCAATACAGGAAAGGCCAGCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CCA 72 bp GAGGAAGGCATGGTGGACCCTGAGGTTGAGATAGTTTaGGTTGTAGAGATGGTGCTGGCCTTTCCTGTATTG +
Preference number: 6 (lower is better)
Translates to: EEGMVDPEVEIV*VVEMVLAFPVL
Trigger: CAATACAGGAAAGGCCAGCACCATCTCTACAACCCAAACTATCTCAACCTCAGGGTCCACCATGCCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CAA 72 bp TGTTGTGTGGTAGATGATCTCCCCAGGATGGAACTGTaGCCCGTTGTAGGTACAGACACAGGCACCAGCATT +
Preference number: 6 (lower is better)
Translates to: CCVVDDLPRMEL*PVVGTDTGTSI
Trigger: AATGCTGGTGCCTGTGTCTGTACCTACAACGGGCAACAGTTCCATCCTGGGGAGATCATCTACCACACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp ACTGTAGCTGGCAGTGGGTGGTCACTGGTTGAGTGGTaGTGTGTGAAATACCTGAGGTCCAGGTCTTTGTGT +
Preference number: 6 (lower is better)
Translates to: TVAGSGWSLVEW*CVKYLRSRSLC
Trigger: ACACAAAGACCTGGACCTCAGGTATTTCACACACAACCACTCAACCAGTGACCACCCACTGCCAGCTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp CTCCATCTCTCTCTCAGGGTAGTTCTTAGCCCTGCATaGCAACTGTGTGATCTCCTCTCGGTGACAGAGTCT +
Preference number: 6 (lower is better)
Translates to: LHLSLRVVLSPA*QLCDLLSVTES
Trigger: AGACTCTGTCACCGAGAGGAGATCACACAGTTGCAATGCAGGGCTAAGAACTACCCTGAGAGAGAGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp CTGTTGTTTTTAAAAGGGCAGGTCTTCGGTATACACTaGCCACAGCACTGCCCTGGCATGGCCTGGTACTCA +
Preference number: 6 (lower is better)
Translates to: LLFLKGQVFGIH*PQHCPGMAWYS
Trigger: TGAGTACCAGGCCATGCCAGGGCAGTGCTGTGGCAAGTGTATACCGAAGACCTGCCCTTTTAAAAACAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp GCCAACTGCTGGCCATGTTCCTCACTTTCCTTGGACTaGAACTCTTGTTCTGAGGACTCTGCATGGCTTGTG +
Preference number: 6 (lower is better)
Translates to: ANCWPCSSLSLD*NSCSEDSAWLV
Trigger: CACAAGCCATGCAGAGTCCTCAGAACAAGAGTTCAAGTCCAAGGAAAGTGAGGAACATGGCCAGCAGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp GTTTGGGTTGTAGAGGTGGTGCTGGTCTTTCCTGTATaGGGTGAGCTGGTTTGGGTTGTAGAGATGGTGCTG +
Preference number: 6 (lower is better)
Translates to: VWVVEVVLVFPV*GELVWVVEMVL
Trigger: CAGCACCATCTCTACAACCCAAACCAGCTCACCCAATACAGGAAAGACCAGCACCACCTCTACAACCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS TCA 72 bp CAATTGGTCCAATTGCAAAGCTCCTGTTTGCACTCATaGGTTGTCTCAGAGGAAGGCATGGTGGACCCTGAG +
Preference number: 6 (lower is better)
Translates to: QLVQLQSSCLHS*VVSEEGMVDPE
Trigger: CTCAGGGTCCACCATGCCTTCCTCTGAGACAACTCATGAGTGCAAACAGGAGCTTTGCAATTGGACCAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
CDS TCA 72 bp CAAGTTGAAAGGCACCTCGACGGAGAAGATGAGACCTaGAAACATGACCCGGACACCAATCTCTTGGATGGT +
Preference number: 6 (lower is better)
Translates to: QVERHLDGEDET*KHDPDTNLLDG
Trigger: ACCATCCAAGAGATTGGTGTCCGGGTCATGTTTTCAGGTCTCATCTTCTCCGTCGAGGTGCCTTTCAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp TGTGTTGGTGCAGTCAGTAGAGTAATTGGTACCCGGTaGATAAAGTGTCCCATTGTACAGGCAGGCACACTG +
Preference number: 6 (lower is better)
Translates to: CVGAVSRVIGTR*IKCPIVQAGTL
Trigger: CAGTGTGCCTGCCTGTACAATGGGACACTTTATGCACCGGGTACCAATTACTCTACTGACTGCACCAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000163321.3
CDS GCA 72 bp AGGCATTACTGTCACAAGGCTTGCTCAGCACATAGGTaGAGTCCCCATGTACTGTGTACTGCCTTCCATCAA +
Preference number: 6 (lower is better)
Translates to: RHYCHKACSAHR*SPHVLCTAFHQ
Trigger: TTGATGGAAGGCAGTACACAGTACATGGGGACTGCACCTATGTGCTGAGCAAGCCTTGTGACAGTAATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp GTAGAAGAACCTGAGGTAACTGTACTGCTGTATGGGTaGTCAGTTGAGGTAACAGGGACTGAGGAGGTTGTG +
Preference number: 6 (lower is better)
Translates to: VEEPEVTVLLYG*SVEVTGTEEVV
Trigger: CACAACCTCCTCAGTCCCTGTTACCTCAACTGAGCACCCATACAGCAGTACAGTTACCTCAGGTTCTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp GAGCCCAGGTTTCAGACGCACAGATGTTTGCATAATTaGACTCAGCTGGATCTCAAGCTGCAAACCCAGGTT +
Preference number: 6 (lower is better)
Translates to: EPRFQTHRCLHN*TQLDLKLQTQV
Trigger: AACCTGGGTTTGCAGCTTGAGATCCAGCTGAGTCCAATTATGCAAACATCTGTGCGTCTGAAACCTGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp TATGGGATAATGTCACAGGAGAAGTCTGATCAGTCCTaGGGCAGTCTTCAGGAATGTGACAGCACAGCAGTC +
Preference number: 6 (lower is better)
Translates to: YGIMSQEKSDQS*GSLQECDSTAV
Trigger: GACTGCTGTGCTGTCACATTCCTGAAGACTGCCCCAGGACTGATCAGACTTCTCCTGTGACATTATCCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp ATGGTGCTGGTCTTTCCTGTATTGGGTGAGCTGGTTTaGGTTGTAGAGGTGGTGCTGGTCTTTCCTGTATTG +
Preference number: 6 (lower is better)
Translates to: MVLVFPVLGELV*VVEVVLVFPVL
Trigger: CAATACAGGAAAGACCAGCACCACCTCTACAACCCAAACCAGCTCACCCAATACAGGAAAGACCAGCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155534.9
CDS CCA 72 bp GTTTGCACTCATGAGTTGTTTCAGAGGAAGGCATGGTaGACCCTGAGGTTGAGATGGACACAGACGATATGG +
Preference number: 6 (lower is better)
Translates to: VCTHELFQRKAW*TLRLRWTQTIW
Trigger: CCATATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAAACAACTCATGAGTGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163321.3
CDS CCA 72 bp CCTGTTTGCACTCATGAGTTGTTTCAGAGGAAGGCATaGTGGACCCTGAGGTTGAGATGGACACAGACGATA +
Preference number: 6 (lower is better)
Translates to: PVCTHELFQRKA*WTLRLRWTQTI
Trigger: TATCGTCTGTGTCCATCTCAACCTCAGGGTCCACCATGCCTTCCTCTGAAACAACTCATGAGTGCAAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163321.3
CDS CAA 72 bp TGTACACATTTGCCCAAATCATCTAAGAAGGTGCCTTaGGGGCAGGTGCAGCCATCTACAGGGATGAAGCTG +
Preference number: 6 (lower is better)
Translates to: CTHLPKSSKKVP*GQVQPSTGMKL
Trigger: CAGCTTCATCCCTGTAGATGGCTGCACCTGCCCCAAAGGCACCTTCTTAGATGATTTGGGCAAATGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp TTTCCATTGACGCGGCAGGGGAAGGTGACTGTACAGTaGGATACACACTGCATTGTGCCCTCATCAAAGATG +
Preference number: 6 (lower is better)
Translates to: FPLTRQGKVTVQ*DTHCIVPSSKM
Trigger: CATCTTTGATGAGGGCACAATGCAGTGTGTATCCAACTGTACAGTCACCTTCCCCTGCCGCGTCAATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp GAGGTGGGATGTGTGGTAACTGAAGCTGTGGAACAGTaGTTTACCACTGTGCAGCACTCAATCCGGATCTCA +
Preference number: 6 (lower is better)
Translates to: EVGCVVTEAVEQ*FTTVQHSIRIS
Trigger: TGAGATCCGGATTGAGTGCTGCACAGTGGTAAACAACTGTTCCACAGCTTCAGTTACCACACATCCCACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp TCTTTTGTGGGAGAGGAATACACATGGGTGGTCCAGTaGGTCTCTGTTTTCGTGCTGACTCCATGTGAGGTG +
Preference number: 6 (lower is better)
Translates to: SFVGEEYTWVVQ*VSVFVLTPCEV
Trigger: CACCTCACATGGAGTCAGCACGAAAACAGAGACCAACTGGACCACCCATGTGTATTCCTCTCCCACAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp ACCCGGACACCAATCTCTTGGATGGTAACATACATCTaGATACCCACACGGGAGGTGACAATGCCATTCTGC +
Preference number: 6 (lower is better)
Translates to: TRTPISWMVTYI*IPTREVTMPFC
Trigger: GCAGAATGGCATTGTCACCTCCCGTGTGGGTATCAAGATGTATGTTACCATCCAAGAGATTGGTGTCCGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp TATACTTGGTTATCAGGGCACGTGAATGAGCAGGTGTaGTTGGTTTGGCTTCTCCAGGGAATGCACACGCCT +
Preference number: 6 (lower is better)
Translates to: YTWLSGHVNEQV*LVWLLQGMHTP
Trigger: AGGCGTGTGCATTCCCTGGAGAAGCCAAACCAACAACACCTGCTCATTCACGTGCCCTGATAACCAAGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp AGACACCATTGGCAGGAAGGCACGCAGATTGAGTCATaGGTACTGAAAAGTGTCGTGCTGTCTGGACAGAAG +
Preference number: 6 (lower is better)
Translates to: RHHWQEGTQIES*VLKSVVLSGQK
Trigger: CTTCTGTCCAGACAGCACGACACTTTTCAGTACCAATGACTCAATCTGCGTGCCTTCCTGCCAATGGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp GTCTCACAGCTGACCATAAAGACATCGGAAAGGGGATaGCTGGAAACCTCACACAGGCATCTCTCACATAGG +
Preference number: 6 (lower is better)
Translates to: VSQLTIKTSERG*LETSHRHLSHR
Trigger: CCTATGTGAGAGATGCCTGTGTGAGGTTTCCAGCAATCCCCTTTCCGATGTCTTTATGGTCAGCTGTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp GAAAACATGACCCGGACACCAATCTCTTGGATGGTAACATACATCTaGATACCCACACGGGAGGTGACAATGCCATTCTGCTGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: ENMTRTPISWMVTYI*IPTREVTMPFCWKP
Trigger: TGGCTTCCAGCAGAATGGCATTGTCACCTCCCGTGTGGGTATCAAGATGTATGTTACCATCCAAGAGATTGGTGTCCGGGTCATGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp CCTGAGGTCCAGGTCTTTGTGTCTATGGTTGCTGAGTaGCTACTGGTGTCTTTTGTGGGAGAGGAATACACA +
Preference number: 6 (lower is better)
Translates to: PEVQVFVSMVAE*LLVSFVGEEYT
Trigger: TGTGTATTCCTCTCCCACAAAAGACACCAGTAGTCACTCAGCAACCATAGACACAAAGACCTGGACCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp ACCCAGGGTAACTGCCATCTAGCCAATTGGTCCAATTaGAAAGCTCCTGTTTGCACTCATGAGTTGTCTCAG +
Preference number: 6 (lower is better)
Translates to: TQGNCHLANWSN*KAPVCTHELSQ
Trigger: CTGAGACAACTCATGAGTGCAAACAGGAGCTTTGCAATTGGACCAATTGGCTAGATGGCAGTTACCCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
CDS CCA 72 bp AGCTCTTCTGACATCCAGCTCCAGTGTCACCAGGTGTaGCATTGTGACAGTCAAAATAGATCATGGGTGCAT +
Preference number: 6 (lower is better)
Translates to: SSSDIQLQCHQV*HCDSQNRSWVH
Trigger: ATGCACCCATGATCTATTTTGACTGTCACAATGCCACACCTGGTGACACTGGAGCTGGATGTCAGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp CTATTTCCAAACTCCAACATGTCACTGACCACGGACTaGCTGCGTGTGGTGAAGTCATTGATGGCATTGTCA +
Preference number: 6 (lower is better)
Translates to: LFPNSNMSLTTD*LRVVKSLMALS
Trigger: TGACAATGCCATCAATGACTTCACCACACGCAGCCAGTCCGTGGTCAGTGACATGTTGGAGTTTGGAAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp TGTCTATGGTTGCTGAGTGACTACTGGTGTCTTTTGTaGGAGAGGAATACACATGGGTGGTCCAGTTGGTCT +
Preference number: 6 (lower is better)
Translates to: CLWLLSDYWCLL*ERNTHGWSSWS
Trigger: AGACCAACTGGACCACCCATGTGTATTCCTCTCCCACAAAAGACACCAGTAGTCACTCAGCAACCATAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp AACTCAGGGCTGAGTCTGAGAAAGATGCTAGTCTTCTaGTCCCACAAAAGCACCAGGCCAATGTCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: NSGLSLRKMLVF*SHKSTRPMSVS
Trigger: GGAAACTGACATTGGCCTGGTGCTTTTGTGGGACAAGAAGACTAGCATCTTTCTCAGACTCAGCCCTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp TTGTGTCTATGGTTGCTGAGTGACTACTGGTGTCTTTaGTGGGAGAGGAATACACATGGGTGGTCCAGTTGG +
Preference number: 6 (lower is better)
Translates to: LCLWLLSDYWCL*WERNTHGWSSW
Trigger: CCAACTGGACCACCCATGTGTATTCCTCTCCCACAAAAGACACCAGTAGTCACTCAGCAACCATAGACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp CCATTCTGCTGGAAGCCAGGACTGACTACTTTGTTGTaGAAGATGATCTGGTTGGTCATGACCCCGCTAACT +
Preference number: 6 (lower is better)
Translates to: PFCWKPGLTTLL*KMIWLVMTPLT
Trigger: AGTTAGCGGGGTCATGACCAACCAGATCATCTTCAACAACAAAGTAGTCAGTCCTGGCTTCCAGCAGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp ATGCCATTCTGCTGGAAGCCAGGACTGACTACTTTGTaGTTGAAGATGATCTGGTTGGTCATGACCCCGCTA +
Preference number: 6 (lower is better)
Translates to: MPFCWKPGLTTL*LKMIWLVMTPL
Trigger: TAGCGGGGTCATGACCAACCAGATCATCTTCAACAACAAAGTAGTCAGTCCTGGCTTCCAGCAGAATGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp ACAATGCCATTCTGCTGGAAGCCAGGACTGACTACTTaGTTGTTGAAGATGATCTGGTTGGTCATGACCCCG +
Preference number: 6 (lower is better)
Translates to: TMPFCWKPGLTT*LLKMIWLVMTP
Trigger: CGGGGTCATGACCAACCAGATCATCTTCAACAACAAAGTAGTCAGTCCTGGCTTCCAGCAGAATGGCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp TCCAGGTCTTTGTGTCTATGGTTGCTGAGTGACTACTGGTGTCTTTaGTGGGAGAGGAATACACATGGGTGGTCCAGTTGGTCTCTGTTT +
Preference number: 6 (lower is better)
Translates to: SRSLCLWLLSDYWCL*WERNTHGWSSWSLF
Trigger: AAACAGAGACCAACTGGACCACCCATGTGTATTCCTCTCCCACAAAAGACACCAGTAGTCACTCAGCAACCATAGACACAAAGACCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp TCACTGGTTGAGTGGTTGTGTGTGAAATACCTGAGGTCCAGGTCTTaGTGTCTATGGTTGCTGAGTGACTACTGGTGTCTTTTGTGGGAG +
Preference number: 6 (lower is better)
Translates to: SLVEWLCVKYLRSRS*CLWLLSDYWCLLWE
Trigger: CTCCCACAAAAGACACCAGTAGTCACTCAGCAACCATAGACACAAAGACCTGGACCTCAGGTATTTCACACACAACCACTCAACCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp GATCTTGGGACACTCTGTCTTCATTGTCACGACCATGAGTACATCTaGGAATTTCTCACACTTATGAGTCACACACGGGTTCCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: DLGTLCLHCHDHEYI*EFLTLMSHTRVPRF
Trigger: GAACCTGGGAACCCGTGTGTGACTCATAAGTGTGAGAAATTCCAAGATGTACTCATGGTCGTGACAATGAAGACAGAGTGTCCCAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp GGGCTGGCAGGTGCTGATATGGTATTGATAGGTCATTaGCTTGGGACAGGTAATTGTAGGCTTTGTGCAGAT +
Preference number: 6 (lower is better)
Translates to: GLAGADMVLIGH*LGTGNCRLCAD
Trigger: ATCTGCACAAAGCCTACAATTACCTGTCCCAAGTCAATGACCTATCAATACCATATCAGCACCTGCCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS TCA 72 bp ACGACCATGAGTACATCTTGGAATTTCTCACACTTATaGGTCACACACGGGTTCCCAGGTTCTGCCCATAAC +
Preference number: 6 (lower is better)
Translates to: TTMSTSWNFSHL*VTHGFPGSAHN
Trigger: GTTATGGGCAGAACCTGGGAACCCGTGTGTGACTCATAAGTGTGAGAAATTCCAAGATGTACTCATGGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp GATGTTTGCATAATTGGACTCAGCTGGATCTCAAGCTaGAAACCCAGGTTGGTCTCACCAACGATGAAGAAG +
Preference number: 6 (lower is better)
Translates to: DVCIIGLSWISS*KPRLVSPTMKK
Trigger: CTTCTTCATCGTTGGTGAGACCAACCTGGGTTTGCAGCTTGAGATCCAGCTGAGTCCAATTATGCAAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS GCA 72 bp ACCCAGGGTAACTGCCATCTAGCCAATTGGTCCAATTaGAAAGCTCCTGTTTGCACTCATGAGTTGTTTCAG +
Preference number: 6 (lower is better)
Translates to: TQGNCHLANWSN*KAPVCTHELFQ
Trigger: CTGAAACAACTCATGAGTGCAAACAGGAGCTTTGCAATTGGACCAATTGGCTAGATGGCAGTTACCCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp AGTCTCCACAGAGACCACAAGTCTTGTTGGTATATTTaGTGTCCAACTCCAGCAGAAGACTGTCATCCTCGT +
Preference number: 6 (lower is better)
Translates to: SLHRDHKSCWYI*CPTPAEDCHPR
Trigger: ACGAGGATGACAGTCTTCTGCTGGAGTTGGACACCAAATATACCAACAAGACTTGTGGTCTCTGTGGAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CCA 72 bp ATGAGACCTGAAAACATGACCCGGACACCAATCTCTTaGATGGTAACATACATCTTGATACCCACACGGGAG +
Preference number: 6 (lower is better)
Translates to: MRPENMTRTPIS*MVTYILIPTRE
Trigger: CTCCCGTGTGGGTATCAAGATGTATGTTACCATCCAAGAGATTGGTGTCCGGGTCATGTTTTCAGGTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp AAGTCTCCACAGAGACCACAAGTCTTGTTGGTATATTaGGTGTCCAACTCCAGCAGAAGACTGTCATCCTCG +
Preference number: 6 (lower is better)
Translates to: KSPQRPQVLLVY*VSNSSRRLSSS
Trigger: CGAGGATGACAGTCTTCTGCTGGAGTTGGACACCAAATATACCAACAAGACTTGTGGTCTCTGTGGAGACTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp TTGTTGGAGAGGAACTCGTTGGATTTTGGACTGCCGTaGAAGTCTCCACAGAGACCACAAGTCTTGTTGGTA +
Preference number: 6 (lower is better)
Translates to: LLERNSLDFGLP*KSPQRPQVLLV
Trigger: TACCAACAAGACTTGTGGTCTCTGTGGAGACTTCAACGGCAGTCCAAAATCCAACGAGTTCCTCTCCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp GAGTGGTTGTGTGTGAAATACCTGAGGTCCAGGTCTTaGTGTCTATGGTTGCTGAGTGACTACTGGTGTCTT +
Preference number: 6 (lower is better)
Translates to: EWLCVKYLRSRS*CLWLLSDYWCL
Trigger: AAGACACCAGTAGTCACTCAGCAACCATAGACACAAAGACCTGGACCTCAGGTATTTCACACACAACCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 90 bp AGCCTAACATTGTTGGAGAGGAACTCGTTGGATTTTGGACTGCCGTaGAAGTCTCCACAGAGACCACAAGTCTTGTTGGTATATTTGGTG +
Preference number: 6 (lower is better)
Translates to: SLTLLERNSLDFGLP*KSPQRPQVLLVYLV
Trigger: CACCAAATATACCAACAAGACTTGTGGTCTCTGTGGAGACTTCAACGGCAGTCCAAAATCCAACGAGTTCCTCTCCAACAATGTTAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3
CDS CAA 72 bp ACACTCTGTCTTCATTGTCACGACCATGAGTACATCTaGGAATTTCTCACACTTATGAGTCACACACGGGTT +
Preference number: 6 (lower is better)
Translates to: TLCLHCHDHEYI*EFLTLMSHTRV
Trigger: AACCCGTGTGTGACTCATAAGTGTGAGAAATTCCAAGATGTACTCATGGTCGTGACAATGAAGACAGAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041924.14
ENSMUST00000155534.9
ENSMUST00000163321.3