Pregenerated sensors for MUC3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094840Ensembl transcript IDs: ENSMUST00000179412.2, ENSMUST00000196391.5
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAACAGGGAGGTGTGGGAACGAGGTAGGATTTGGGGATAGCTGTTaGGATGGAGGAGGGAGCAGGTTTGTAGGTGCCAGGATAGAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: GTGRCGNEVGFGDSC*DGGGSRFVGARIEE Trigger: CTCCTCTATCCTGGCACCTACAAACCTGCTCCCTCCTCCATCCCAACAGCTATCCCCAAATCCTACCTCGTTCCCACACCTCCCTGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR TCA 90 bp | CACTCGCTGACTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTaGGGGTTCCAAGCTCAGAGGTCACATCAGTTTCTGAGTGATGGA | + |
|
Preference number: 1 (lower is better) Translates to: HSLTSCPQNRPGKGN*GFQAQRSHQFLSDG Trigger: TCCATCACTCAGAAACTGATGTGACCTCTGAGCTTGGAACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTCAGCGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR CCA 90 bp | GAAATAAGGAGACGGGTCGTGTCCCCTCGTCGACAAATCCCTGCCTaGGATTCGCAATCATCAAGGGTGGAAAGAAGAGGTTGGAGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: EIRRRVVSPRRQIPA*DSQSSRVERRGWSL Trigger: GAGGCTCCAACCTCTTCTTTCCACCCTTGATGATTGCGAATCCCAGGCAGGGATTTGTCGACGAGGGGACACGACCCGTCTCCTTATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR GCA 90 bp | AGAGGAAATAAGGAGACGGGTCGTGTCCCCTCGTCGACAAATCCCTaGCTGGGATTCGCAATCATCAAGGGTGGAAAGAAGAGGTTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: RGNKETGRVPSSTNP*LGFAIIKGGKKRLE Trigger: CTCCAACCTCTTCTTTCCACCCTTGATGATTGCGAATCCCAGGCAGGGATTTGTCGACGAGGGGACACGACCCGTCTCCTTATTTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR TCA 90 bp | CCCCAGAACCTCATTAAACTCTGTCTCAGAGGAACAACGGAGACCTaGCACTGCAAGGTGGTAGAGTCAGGTGGGAGAGAGAATCTGAGA | + |
|
Preference number: 1 (lower is better) Translates to: PQNLIKLCLRGTTET*HCKVVESGGRENLR Trigger: TCTCAGATTCTCTCTCCCACCTGACTCTACCACCTTGCAGTGTCAGGTCTCCGTTGTTCCTCTGAGACAGAGTTTAATGAGGTTCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR TCA 90 bp | AGACTGAGGCAAGAGACTGAGATGGCCTTGCCCACCATACTGGAGTaGAGAGCAGAGATACATGTTCTCCAAGTGGGTTTCTGTCAAACA | + |
|
Preference number: 1 (lower is better) Translates to: RLRQETEMALPTILE*RAEIHVLQVGFCQT Trigger: TGTTTGACAGAAACCCACTTGGAGAACATGTATCTCTGCTCTTCACTCCAGTATGGTGGGCAAGGCCATCTCAGTCTCTTGCCTCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR TCA 90 bp | CAGCCAATGTATTTATTAGATTTATATGGGGAACTAGACACTCGCTaGCTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTGAGGGT | + |
|
Preference number: 1 (lower is better) Translates to: QPMYLLDLYGELDTR*LPVPRTVLAKGTEG Trigger: ACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTCAGCGAGTGTCTAGTTCCCCATATAAATCTAATAAATACATTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR TCA 90 bp | GCAAAGGGAACTGAGGGTTCCAAGCTCAGAGGTCACATCAGTTTCTaGGTGATGGAAACAAAAGAAAAGACATCAACGTGGAAGAGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: AKGTEGSKLRGHISF*VMETKEKTSTWKRR Trigger: CCTCCTCTTCCACGTTGATGTCTTTTCTTTTGTTTCCATCACTCAGAAACTGATGTGACCTCTGAGCTTGGAACCCTCAGTTCCCTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | GCTGACTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTGAGGGTTCCAAGCCAGCCCCGGGCAGAGTaGGGGAGCACAGAAGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: ADFLSPEPSWQRELRVPSQPRAE*GSTEET Trigger: GGTCTCTTCTGTGCTCCCCCACTCTGCCCGGGGCTG...GCTTGGAACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | GGACCCGATGGCACCCTGGCTGTACGAGGACCCCTAGGAACAGGGAGGTGTGGGGGAGCCTGGGCTGTGTaGGTACTTGAAGCAGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GPDGTLAVRGPLGTGRCGGAWAV*VLEAVL Trigger: AAGAACTGCTTCAAGTACCCACACAGCCCAGGCTCC...CCCACACCTCCCTGTTCCTAGGGGTCCTCGTACAGCCAGGGTGCCATCGGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR GCA 90 bp | GGACCCGATGGCACCCTGGCTGTACGAGGACCCCTAGGAACAGGGAGGTGTGGGAGACTGAGATGGCCTTaGCCACCATACTGGAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GPDGTLAVRGPLGTGRCGRLRWP*PPYWSE Trigger: TTCACTCCAGTATGGTGGGCAAGGCCATCTCAGTCT...CCCACACCTCCCTGTTCCTAGGGGTCCTCGTACAGCCAGGGTGCCATCGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR TCA 90 bp | GCTGACTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTGAGGGTTCCAAGCAGAGAGACGGAGGTGTaGCTTCCTTCATGCTGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: ADFLSPEPSWQRELRVPSRETEV*LPSCCP Trigger: GGGGCAGCATGAAGGAAGTCACACCTCCGTCTCTCT...GCTTGGAACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR GCA 90 bp | AGGTGTGGGAACGAGGTAGGATTTGGGGATAGCTGTTGGGATGGAGGAGGGAGCGCCAATGGCTGGGGGTaGGTGGCTCAATGGGTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RCGNEVGFGDSCWDGGGSANGWG*VAQWVE Trigger: CTCTACCCATTGAGCCACGCACCCCCAGCCATTGGC...GCTCCCTCCTCCATCCCAACAGCTATCCCCAAATCCTACCTCGTTCCCACACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGAGCAATAGGGCTAAGGGAGGAGACTGGCACAAGTATCAACTCGAGGAGCCAGCCCCGGGCAGAGTaGGGGAGCACAGAAGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: ERAIGLREETGTSINSRSQPRAE*GSTEET Trigger: GGTCTCTTCTGTGCTCCCCCACTCTGCCCGGGGCTG...GCTCCTCGAGTTGATACTTGTGCCAGTCTCCTCCCTTAGCCCTATTGCTCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | GGACCCGATGGCACCCTGGCTGTACGAGGACCCCTAGGAACAGGGAGGTGTGGGGGTGGTAGAGTCAGGTaGGAGAGAGAATCTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GPDGTLAVRGPLGTGRCGGGRVR*ERESEK Trigger: TTTCTCAGATTCTCTCTCCCACCTGACTCTACCACC...CCCACACCTCCCTGTTCCTAGGGGTCCTCGTACAGCCAGGGTGCCATCGGGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR TCA 90 bp | GACTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTGAGGGTTCCAAGCTCAACTGAGGCAAGAGACTaGGATGGCCTTGCCCACCAT | + |
|
Preference number: 2 (lower is better) Translates to: DFLSPEPSWQRELRVPSSTEARD*DGLAHH Trigger: ATGGTGGGCAAGGCCATCTCAGTCTCTTGCCTCAGT...TGAGCTTGGAACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR GCA 90 bp | CAGGATAGAGGAGCAAGGAATCAAGGTCCTGGTCAGAGAGTTGGAGACCAGCCTGCCAATGGCTGGGGGTaGGTGGCTCAATGGGTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QDRGARNQGPGQRVGDQPANGWG*VAQWVE Trigger: CTCTACCCATTGAGCCACGCACCCCCAGCCATTGGC...AGGCTGGTCTCCAACTCTCTGACCAGGACCTTGATTCCTTGCTCCTCTATCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | GCTGACTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTGAGGGTTCCAAGCTCCTGGTCAGAGAGTTaGAGACCAGCCTGTCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: ADFLSPEPSWQRELRVPSSWSES*RPACQL Trigger: CAGTTGACAGGCTGGTCTCCAACTCTCTGACCAGGA...GCTTGGAACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR TCA 90 bp | GATGGAGGAGGGAGCAGGTTTGTAGGTGCCAGGATAGAGGAGCAAGGAATCAAGACTGAGGCAAGAGACTaGGATGGCCTTGCCCACCAT | + |
|
Preference number: 2 (lower is better) Translates to: DGGGSRFVGARIEEQGIKTEARD*DGLAHH Trigger: ATGGTGGGCAAGGCCATCTCAGTCTCTTGCCTCAGT...CTTGATTCCTTGCTCCTCTATCCTGGCACCTACAAACCTGCTCCCTCCTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | CCTTGCCCACCATACTGGAGTGAAGAGCAGAGATACATGTTCTCCAAGTGGGTTTCCCACCAAGAACACTaGGAGCCTGGGCTGTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PCPPYWSEEQRYMFSKWVSHQEH*EPGLCG Trigger: CCCACACAGCCCAGGCTCCCAGTGTTCTTGGTGGGA...AACCCACTTGGAGAACATGTATCTCTGCTCTTCACTCCAGTATGGTGGGCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGGATAGAGGAGCAAGGAATCAAGGTCCTGGTCAGAGAGTTGGAGACCAGCCTGGCAAGAGACTGAGATaGCCTTGCCCACCATACTGG | + |
|
Preference number: 2 (lower is better) Translates to: QDRGARNQGPGQRVGDQPGKRLR*PCPPYW Trigger: CCAGTATGGTGGGCAAGGCCATCTCAGTCTCTTGCC...AGGCTGGTCTCCAACTCTCTGACCAGGACCTTGATTCCTTGCTCCTCTATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | GACTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTGAGGGTTCCAAGCTCAACGGAAGTAGGGTCTTaGGAAGCATTAACTGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: DFLSPEPSWQRELRVPSSTEVGS*EALTGD Trigger: GTCCCCAGTTAATGCTTCCCAAGACCCTACTTCCGT...TGAGCTTGGAACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGGATAGAGGAGCAAGGAATCAAGGTCCTGGTCAGAGAGTTGGAGACCAGCCTGGCTGTGTGGGTACTTaGAGCAGTTCTTGCACAATG | + |
|
Preference number: 2 (lower is better) Translates to: QDRGARNQGPGQRVGDQPGCVGT*SSSCTM Trigger: CATTGTGCAAGAACTGCTTCAAGTACCCACACAGCC...AGGCTGGTCTCCAACTCTCTGACCAGGACCTTGATTCCTTGCTCCTCTATCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | AGATTTATATGGGGAACTAGACACTCGCTGACTTCCTGTCCCCAGAACCGTCCTTTTGGGGATAGCTGTTaGGATGGAGGAGGGAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RFIWGTRHSLTSCPQNRPFGDSC*DGGGSR Trigger: CCTGCTCCCTCCTCCATCCCAACAGCTATCCCCAAA...AGGACGGTTCTGGGGACAGGAAGTCAGCGAGTGTCTAGTTCCCCATATAAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR GCA 90 bp | GACTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTGAGGGTTCCAAGCTCAAGGATGGCAATAGAGTaGAAATCCAAGAGTAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: DFLSPEPSWQRELRVPSSRMAIE*KSKSKS Trigger: GCTCTTACTCTTGGATTTGCACTCTATTGCCATCCT...TGAGCTTGGAACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAAATCCCTGCCTGGGATTCGCAATCATCAAGGGTGGAAAGAAGAGGTTGGAGTCCTGGTCAGAGAGTTaGAGACCAGCCTGTCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: TNPCLGFAIIKGGKKRLESWSES*RPACQL Trigger: CAGTTGACAGGCTGGTCTCCAACTCTCTGACCAGGA...CTCCAACCTCTTCTTTCCACCCTTGATGATTGCGAATCCCAGGCAGGGATTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR TCA 90 bp | ACAAATCCCTGCCTGGGATTCGCAATCATCAAGGGTGGAAAGAAGAGGTTGGAGGGCTGTGTGGGTACTTaGAGCAGTTCTTGCACAATG | + |
|
Preference number: 2 (lower is better) Translates to: TNPCLGFAIIKGGKKRLEGCVGT*SSSCTM Trigger: CATTGTGCAAGAACTGCTTCAAGTACCCACACAGCC...CTCCAACCTCTTCTTTCCACCCTTGATGATTGCGAATCCCAGGCAGGGATTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGGATAGAGGAGCAAGGAATCAAGGTCCTGGTCAGAGAGTTGGAGACCAGCCTGTGGGAGAGAGAATCTaGGAAAAGCAACAGGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: QDRGARNQGPGQRVGDQPVGERI*EKQQEI Trigger: TATCTCCTGTTGCTTTTCTCAGATTCTCTCTCCCAC...AGGCTGGTCTCCAACTCTCTGACCAGGACCTTGATTCCTTGCTCCTCTATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR GCA 90 bp | ACAAATCCCTGCCTGGGATTCGCAATCATCAAGGGTGGAAAGAAGAGGTTGGAGAGACTGAGATGGCCTTaGCCACCATACTGGAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: TNPCLGFAIIKGGKKRLERLRWP*PPYWSE Trigger: TTCACTCCAGTATGGTGGGCAAGGCCATCTCAGTCT...CTCCAACCTCTTCTTTCCACCCTTGATGATTGCGAATCCCAGGCAGGGATTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAAATCCCTGCCTGGGATTCGCAATCATCAAGGGTGGAAAGAAGAGGTTGGAGACGGAAGTAGGGTCTTaGGAAGCATTAACTGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: TNPCLGFAIIKGGKKRLETEVGS*EALTGD Trigger: GTCCCCAGTTAATGCTTCCCAAGACCCTACTTCCGT...CTCCAACCTCTTCTTTCCACCCTTGATGATTGCGAATCCCAGGCAGGGATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR GCA 90 bp | GATGGAGGAGGGAGCAGGTTTGTAGGTGCCAGGATAGAGGAGCAAGGAATCAAGGAGTCATGGTATAAGTaGATCACACCCATTTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: DGGGSRFVGARIEEQGIKESWYK*ITPISQ Trigger: CTGTGAAATGGGTGTGATGCACTTATACCATGACTC...CTTGATTCCTTGCTCCTCTATCCTGGCACCTACAAACCTGCTCCCTCCTCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR GCA 90 bp | CAGGATAGAGGAGCAAGGAATCAAGGTCCTGGTCAGAGAGTTGGAGACCAGCCTAGGATGGCAATAGAGTaGAAATCCAAGAGTAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: QDRGARNQGPGQRVGDQPRMAIE*KSKSKS Trigger: GCTCTTACTCTTGGATTTGCACTCTATTGCCATCCT...AGGCTGGTCTCCAACTCTCTGACCAGGACCTTGATTCCTTGCTCCTCTATCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAAATCCCTGCCTGGGATTCGCAATCATCAAGGGTGGAAAGAAGAGGTTGGAGGGTGGTAGAGTCAGGTaGGAGAGAGAATCTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TNPCLGFAIIKGGKKRLEGGRVR*ERESEK Trigger: TTTCTCAGATTCTCTCTCCCACCTGACTCTACCACC...CTCCAACCTCTTCTTTCCACCCTTGATGATTGCGAATCCCAGGCAGGGATTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR TCA 72 bp | GGTCCTGGTCAGAGAGTTGGAGACCAGCCTGTCAACTaGGAGAGCAATAGGGCTAAGGGAGGAGACTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GPGQRVGDQPVN*ESNRAKGGDWH Trigger: GTGCCAGTCTCCTCCCTTAGCCCTATTGCTCTCTCAGTTGACAGGCTGGTCTCCAACTCTCTGACCAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR CCA 72 bp | CCCCTCCCACCAAGAACACTGGGAGCCTGGGCTGTGTaGGTACTTGAAGCAGTTCTTGCACAATGGGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PLPPRTLGAWAV*VLEAVLAQWAQ Trigger: TTGAGCCCATTGTGCAAGAACTGCTTCAAGTACCCACACAGCCCAGGCTCCCAGTGTTCTTGGTGGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR CCA 72 bp | GGTCAAGGAAACAGGAACCCCTCCCACCAAGAACACTaGGAGCCTGGGCTGTGTGGGTACTTGAAGCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GQGNRNPSHQEH*EPGLCGYLKQF Trigger: GAACTGCTTCAAGTACCCACACAGCCCAGGCTCCCAGTGTTCTTGGTGGGAGGGGTTCCTGTTTCCTTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR CCA 72 bp | AGGTGTGGGAACGAGGTAGGATTTGGGGATAGCTGTTaGGATGGAGGAGGGAGCAGGTTTGTAGGTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RCGNEVGFGDSC*DGGGSRFVGAR Trigger: CCTGGCACCTACAAACCTGCTCCCTCCTCCATCCCAACAGCTATCCCCAAATCCTACCTCGTTCCCACACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CAA 90 bp | GCTGACTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTGAGGGTTCCAAGCGGGCTGTGTGGGTACTaGAAGCAGTTCTTGCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: ADFLSPEPSWQRELRVPSGLCGY*KQFLHN Trigger: ATTGTGCAAGAACTGCTTCAAGTACCCACACAGCCC...GCTTGGAACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR TCA 72 bp | ACTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTaGGGGTTCCAAGCTCAGAGGTCACATCAGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSCPQNRPGKGN*GFQAQRSHQFL Trigger: CAGAAACTGATGTGACCTCTGAGCTTGGAACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR CCA 72 bp | AAACAGGAACCCCTCCCACCAAGAACACTGGGAGCCTaGGCTGTGTGGGTACTTGAAGCAGTTCTTGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: KQEPLPPRTLGA*AVWVLEAVLAQ Trigger: TTGTGCAAGAACTGCTTCAAGTACCCACACAGCCCAGGCTCCCAGTGTTCTTGGTGGGAGGGGTTCCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR CCA 72 bp | GACAAATCCCTGCCTGGGATTCGCAATCATCAAGGGTaGAAAGAAGAGGTTGGAGCCTCAGGGTACGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: DKSLPGIRNHQG*KEEVGASGYGS Trigger: ACTTCCGTACCCTGAGGCTCCAACCTCTTCTTTCCACCCTTGATGATTGCGAATCCCAGGCAGGGATTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR TCA 72 bp | ACCAAGAACACTGGGAGCCTGGGCTGTGTGGGTACTTaGAGCAGTTCTTGCACAATGGGCTCAATTGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: TKNTGSLGCVGT*SSSCTMGSIVQ Trigger: CTGTACAATTGAGCCCATTGTGCAAGAACTGCTTCAAGTACCCACACAGCCCAGGCTCCCAGTGTTCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR TCA 72 bp | CTCATTAAACTCTGTCTCAGAGGAACAACGGAGACCTaGCACTGCAAGGTGGTAGAGTCAGGTGGGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LIKLCLRGTTET*HCKVVESGGRE Trigger: CTCTCTCCCACCTGACTCTACCACCTTGCAGTGTCAGGTCTCCGTTGTTCCTCTGAGACAGAGTTTAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR GCA 72 bp | AGTGCAAATCCAAGAGTAAGAGCCAATGGCTGGGGGTaGGTGGCTCAATGGGTAGAGCTCTTGTCTAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SANPRVRANGWG*VAQWVELLSSI Trigger: TATGCTAGACAAGAGCTCTACCCATTGAGCCACGCACCCCCAGCCATTGGCTCTTACTCTTGGATTTGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR CCA 72 bp | ATGGCAATAGAGTGCAAATCCAAGAGTAAGAGCCAATaGCTGGGGGTGCGTGGCTCAATGGGTAGAGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: MAIECKSKSKSQ*LGVRGSMGRAL Trigger: AAGAGCTCTACCCATTGAGCCACGCACCCCCAGCCATTGGCTCTTACTCTTGGATTTGCACTCTATTGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGCCCACCATACTGGAGTGAAGAGCAGAGATACATGTTCTCCAAGTGGGTTGGGCTGTGTGGGTACTaGAAGCAGTTCTTGCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: PCPPYWSEEQRYMFSKWVGLCGY*KQFLHN Trigger: ATTGTGCAAGAACTGCTTCAAGTACCCACACAGCCC...AACCCACTTGGAGAACATGTATCTCTGCTCTTCACTCCAGTATGGTGGGCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR TCA 72 bp | CCCAGGAATAATGTCAGGCTATGTAAACATGCAAGATaGAGGGTAAGCCTCACCAGGATGGCAATAGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PRNNVRLCKHAR*RVSLTRMAIEC Trigger: GCACTCTATTGCCATCCTGGTGAGGCTTACCCTTCATCTTGCATGTTTACATAGCCTGACATTATTCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR TCA 72 bp | TATTTATTAGATTTATATGGGGAACTAGACACTCGCTaGCTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: YLLDLYGELDTR*LPVPRTVLAKG Trigger: TCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTCAGCGAGTGTCTAGTTCCCCATATAAATCTAATAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR CCA 72 bp | TACTGGAGTGAAGAGCAGAGATACATGTTCTCCAAGTaGGTTTCTGTCAAACAAAGAGAAGGATGGGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: YWSEEQRYMFSK*VSVKQREGWEV Trigger: GACCTCCCATCCTTCTCTTTGTTTGACAGAAACCCACTTGGAGAACATGTATCTCTGCTCTTCACTCCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR TCA 90 bp | GGACCCGATGGCACCCTGGCTGTACGAGGACCCCTAGGAACAGGGAGGTGTGGGACAGCAGCAGCACAATaGCAGCCCCCACCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPDGTLAVRGPLGTGRCGTAAAQ*QPPPGL Trigger: GAGGCCTGGTGGGGGCTGTCATTGTGCTGCTGCTGT...CCCACACCTCCCTGTTCCTAGGGGTCCTCGTACAGCCAGGGTGCCATCGGGTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR TCA 90 bp | GACTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTGAGGGTTCCAAGCTCAACAGCAGCAGCACAATaGCAGCCCCCACCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DFLSPEPSWQRELRVPSSTAAAQ*QPPPGL Trigger: GAGGCCTGGTGGGGGCTGTCATTGTGCTGCTGCTGT...TGAGCTTGGAACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR CAA 72 bp | GGGAGGAGACTGGCACAAGTATCAACTCGAGGAGCTTaGGGGCGTGAGAGTAGGGGCCACAGCAAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRRLAQVSTRGA*GRESRGHSKEP Trigger: TGGCTCCTTGCTGTGGCCCCTACTCTCACGCCCCAAAGCTCCTCGAGTTGATACTTGTGCCAGTCTCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CCA 90 bp | TGTACGAGGACCCCTAGGAACAGGGAGGTGTGGGAACGAGGTAGGATTTGGGGAAACCATTTCCTGTCCTaGGTCCAGGACCTGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CTRTPRNREVWERGRIWGNHFLS*VQDLPE Trigger: CTCGGGCAGGTCCTGGACCCAGGACAGGAAATGGTT...TCCCCAAATCCTACCTCGTTCCCACACCTCCCTGTTCCTAGGGGTCCTCGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR CAA 72 bp | TGGGTACTTGAAGCAGTTCTTGCACAATGGGCTCAATaGTACAGCCCCGGGCAGAGTGGGGGAGCACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WVLEAVLAQWAQ*YSPGQSGGAQK Trigger: CTTCTGTGCTCCCCCACTCTGCCCGGGGCTGTACAATTGAGCCCATTGTGCAAGAACTGCTTCAAGTACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CCA 90 bp | AGGTCAAGGAAACAGGAACCCCTCCCACCAAGAACACTGGGAGCCTGGGCTGTGCAGTTCGATGACAAATaGCTTCTGGAGTCAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSRKQEPLPPRTLGAWAVQFDDK*LLESDL Trigger: AAGATCTGACTCCAGAAGCCATTTGTCATCGAACTG...CACAGCCCAGGCTCCCAGTGTTCTTGGTGGGAGGGGTTCCTGTTTCCTTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGTCAAGGAAACAGGAACCCCTCCCACCAAGAACACTGGGAGCCTGGGCTTCTCCAAGGCAACATaGAAGTTTTCATTAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WEVKETGTPPTKNTGSLGFSKAT*KFSLVA Trigger: AGCCACTAATGAAAACTTCCATGTTGCCTTGGAGAA...GCCCAGGCTCCCAGTGTTCTTGGTGGGAGGGGTTCCTGTTTCCTTGACCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGCAATAGGGCTAAGGGAGGAGACTGGCACAAGTATCAACTCGAGGAGCAACACTGTCCATGGTTaGAGTCGATGGTGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERAIGLREETGTSINSRSNTVHG*SRWCHS Trigger: TGAATGGCACCATCGACTGCAACCATGGACAGTGTT...GCTCCTCGAGTTGATACTTGTGCCAGTCTCCTCCCTTAGCCCTATTGCTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR GCA 90 bp | GATGGAGGAGGGAGCAGGTTTGTAGGTGCCAGGATAGAGGAGCAAGGAATCAAGAACACTGTCCATGGTTaGAGTCGATGGTGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGGGSRFVGARIEEQGIKNTVHG*SRWCHS Trigger: TGAATGGCACCATCGACTGCAACCATGGACAGTGTT...CTTGATTCCTTGCTCCTCTATCCTGGCACCTACAAACCTGCTCCCTCCTCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CCA 90 bp | TGTACGAGGACCCCTAGGAACAGGGAGGTGTGGGAACGAGGTAGGATTTGGGGACAGTTCGATGACAAATaGCTTCTGGAGTCAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTRTPRNREVWERGRIWGQFDDK*LLESDL Trigger: AAGATCTGACTCCAGAAGCCATTTGTCATCGAACTG...TCCCCAAATCCTACCTCGTTCCCACACCTCCCTGTTCCTAGGGGTCCTCGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| 3UTR CAA 72 bp | ATAGAGGAGCAAGGAATCAAGGTCCTGGTCAGAGAGTaGGAGACCAGCCTGTCAACTGAGAGAGCAATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IEEQGIKVLVRE*ETSLSTERAIG Trigger: CCCTATTGCTCTCTCAGTTGACAGGCTGGTCTCCAACTCTCTGACCAGGACCTTGATTCCTTGCTCCTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CCA 90 bp | TGTACGAGGACCCCTAGGAACAGGGAGGTGTGGGAACGAGGTAGGATTTGGGGAATGACAAATGGCTTCTaGAGTCAGATCTTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CTRTPRNREVWERGRIWGMTNGF*SQIFLS Trigger: ACTGAGAAAGATCTGACTCCAGAAGCCATTTGTCAT...TCCCCAAATCCTACCTCGTTCCCACACCTCCCTGTTCCTAGGGGTCCTCGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CCA 90 bp | TTGCACAATGGGCTCAATTGTACAGCCCCGGGCAGAGTGGGGGAGCACAGAAGATTCTCCAAGGCAACATaGAAGTTTTCATTAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHNGLNCTAPGRVGEHRRFSKAT*KFSLVA Trigger: AGCCACTAATGAAAACTTCCATGTTGCCTTGGAGAA...TCTTCTGTGCTCCCCCACTCTGCCCGGGGCTGTACAATTGAGCCCATTGTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCCACCATACTGGAGTGAAGAGCAGAGATACATGTTCTCCAAGTGGGTTATGACAAATGGCTTCTaGAGTCAGATCTTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCPPYWSEEQRYMFSKWVMTNGF*SQIFLS Trigger: ACTGAGAAAGATCTGACTCCAGAAGCCATTTGTCAT...AACCCACTTGGAGAACATGTATCTCTGCTCTTCACTCCAGTATGGTGGGCAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS GCA 90 bp | CTTCATCCCAGATCTCAAACCATTTCCTGTCCTGGGTCCAGGACCTaGCCGAGGACTGGCGGTCCTTGTCTCTTCCCCGGGAACGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LHPRSQTISCPGSRT*PRTGGPCLFPGNVP Trigger: TGGCACGTTCCCGGGGAAGAGACAAGGACCGCCAGTCCTCGGGCAGGTCCTGGACCCAGGACAGGAAATGGTTTGAGATCTGGGATGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CCA 90 bp | ATCTCAAACCATTTCCTGTCCTGGGTCCAGGACCTGCCCGAGGACTaGCGGTCCTTGTCTCTTCCCCGGGAACGTGCCACCCAGACACTT | + |
|
Preference number: 5 (lower is better) Translates to: ISNHFLSWVQDLPED*RSLSLPRERATQTL Trigger: AAGTGTCTGGGTGGCACGTTCCCGGGGAAGAGACAAGGACCGCCAGTCCTCGGGCAGGTCCTGGACCCAGGACAGGAAATGGTTTGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CAA 90 bp | TGCACAATGGGCTCAATTGTACAGCCCCGGGCAGAGTGGGGGAGCACAGAAGAGACGCCAGGTGTGCAATaGGTGACACAGCGGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTMGSIVQPRAEWGSTEETPGVQ*VTQRSL Trigger: CAGGCTCCGCTGTGTCACCAATTGCACACCTGGCGT...CTCTTCTGTGCTCCCCCACTCTGCCCGGGGCTGTACAATTGAGCCCATTGTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTTGCACAATGGGCTCAATTGTACAGCCCCGGGCAGAGTGGGGGAGCACACGCCAGGTGTGCAATaGGTGACACAGCGGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QFLHNGLNCTAPGRVGEHTPGVQ*VTQRSL Trigger: CAGGCTCCGCTGTGTCACCAATTGCACACCTGGCGT...GTGCTCCCCCACTCTGCCCGGGGCTGTACAATTGAGCCCATTGTGCAAGAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS TCA 90 bp | GTGCCACCCAGACACTTAAAGCCACCAATAACAGCAGCAGCACAATaGCAGCCCCCACCAGGCCTCCAACCAAAACCCTCCAGTCAACGG | + |
|
Preference number: 5 (lower is better) Translates to: VPPRHLKPPITAAAQ*QPPPGLQPKPSSQR Trigger: CCGTTGACTGGAGGGTTTTGGTTGGAGGCCTGGTGGGGGCTGTCATTGTGCTGCTGCTGTTATTGGTGGCTTTAAGTGTCTGGGTGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CCA 90 bp | AAGCAGCGGCAGGTTGGACCGCTCTTCTGCAGAAAACACTGTCCATaGTTGCAGTCGATGGTGCCATTCACGCCAGGTGTGCAATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KQRQVGPLFCRKHCP*LQSMVPFTPGVQLV Trigger: CACCAATTGCACACCTGGCGTGAATGGCACCATCGACTGCAACCATGGACAGTGTTTTCTGCAGAAGAGCGGTCCAACCTGCCGCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTTGCACAATGGGCTCAATTGTACAGCCCCGGGCAGAGTGGGGGAGCACTCTTTCTCAGTGCGATaGTTCACCTTGATGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QFLHNGLNCTAPGRVGEHSFSVR*FTLMES Trigger: TGACTCCATCAAGGTGAACAATCGCACTGAGAAAGA...GTGCTCCCCCACTCTGCCCGGGGCTGTACAATTGAGCCCATTGTGCAAGAACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CAA 90 bp | GACTTCCTGTCCCCAGAACCGTCCTGGCAAAGGGAACTGAGGGTTCCAAGCTCAGGCTACCTCAGGTCTTaGGATGTGAACCATCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: DFLSPEPSWQRELRVPSSGYLRS*DVNHHV Trigger: AACATGATGGTTCACATCCAAAGACCTGAGGTAGCC...TGAGCTTGGAACCCTCAGTTCCCTTTGCCAGGACGGTTCTGGGGACAGGAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGCAATAGGGCTAAGGGAGGAGACTGGCACAAGTATCAACTCGAGGAGCTCTTTCTCAGTGCGATaGTTCACCTTGATGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ERAIGLREETGTSINSRSSFSVR*FTLMES Trigger: TGACTCCATCAAGGTGAACAATCGCACTGAGAAAGA...GCTCCTCGAGTTGATACTTGTGCCAGTCTCCTCCCTTAGCCCTATTGCTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CCA 90 bp | GTGTTCCTCAAAACCCTTGGGAGCAGTTCGATGACAAATGGCTTCTaGAGTCAGATCTTTCTCAGTGCGATTGTTCACCTTGATGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFLKTLGSSSMTNGF*SQIFLSAIVHLDGV Trigger: GACTCCATCAAGGTGAACAATCGCACTGAGAAAGATCTGACTCCAGAAGCCATTTGTCATCGAACTGCTCCCAAGGGTTTTGAGGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CAA 72 bp | TCCTGGGTCCAGGACCTGCCCGAGGACTGGCGGTCCTaGTCTCTTCCCCGGGAACGTGCCACCCAGACACTT | + |
|
Preference number: 6 (lower is better) Translates to: SWVQDLPEDWRS*SLPRERATQTL Trigger: AAGTGTCTGGGTGGCACGTTCCCGGGGAAGAGACAAGGACCGCCAGTCCTCGGGCAGGTCCTGGACCCAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CAA 90 bp | CATTTCCTGTCCTGGGTCCAGGACCTGCCCGAGGACTGGCGGTCCTaGTCTCTTCCCCGGGAACGTGCCACCCAGACACTTAAAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: HFLSWVQDLPEDWRS*SLPRERATQTLKAT Trigger: GGTGGCTTTAAGTGTCTGGGTGGCACGTTCCCGGGGAAGAGACAAGGACCGCCAGTCCTCGGGCAGGTCCTGGACCCAGGACAGGAAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CAA 90 bp | GTGGGCCTGAGACCCAGTACGTGTCTGTGGAAAAGCAGCGGCAGGTaGGACCGCTCTTCTGCAGAAAACACTGTCCATGGTTGCAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: VGLRPSTCLWKSSGR*DRSSAENTVHGCSR Trigger: TCGACTGCAACCATGGACAGTGTTTTCTGCAGAAGAGCGGTCCAACCTGCCGCTGCTTTTCCACAGACACGTACTGGGTCTCAGGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CAA 72 bp | TTGCAGTCGATGGTGCCATTCACGCCAGGTGTGCAATaGGTGACACAGCGGAGCCTGCTCAGCTCCACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LQSMVPFTPGVQ*VTQRSLLSSTK Trigger: TTTGGTGGAGCTGAGCAGGCTCCGCTGTGTCACCAATTGCACACCTGGCGTGAATGGCACCATCGACTGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CAA 90 bp | CAGCGGCAGGTTGGACCGCTCTTCTGCAGAAAACACTGTCCATGGTaGCAGTCGATGGTGCCATTCACGCCAGGTGTGCAATTGGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: QRQVGPLFCRKHCPW*QSMVPFTPGVQLVT Trigger: TGTCACCAATTGCACACCTGGCGTGAATGGCACCATCGACTGCAACCATGGACAGTGTTTTCTGCAGAAGAGCGGTCCAACCTGCCGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CCA 72 bp | CAGGTTGGACCGCTCTTCTGCAGAAAACACTGTCCATaGTTGCAGTCGATGGTGCCATTCACGCCAGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QVGPLFCRKHCP*LQSMVPFTPGV Trigger: CACACCTGGCGTGAATGGCACCATCGACTGCAACCATGGACAGTGTTTTCTGCAGAAGAGCGGTCCAACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS TCA 72 bp | AGACACTTAAAGCCACCAATAACAGCAGCAGCACAATaGCAGCCCCCACCAGGCCTCCAACCAAAACCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RHLKPPITAAAQ*QPPPGLQPKPS Trigger: GGAGGGTTTTGGTTGGAGGCCTGGTGGGGGCTGTCATTGTGCTGCTGCTGTTATTGGTGGCTTTAAGTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS GCA 72 bp | TCTGTGGAAAAGCAGCGGCAGGTTGGACCGCTCTTCTaGAGAAAACACTGTCCATGGTTGCAGTCGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SVEKQRQVGPLF*RKHCPWLQSMV Trigger: CACCATCGACTGCAACCATGGACAGTGTTTTCTGCAGAAGAGCGGTCCAACCTGCCGCTGCTTTTCCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CCA 72 bp | GACCCAGTACGTGTCTGTGGAAAAGCAGCGGCAGGTTaGACCGCTCTTCTGCAGAAAACACTGTCCATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: DPVRVCGKAAAG*TALLQKTLSMV Trigger: AACCATGGACAGTGTTTTCTGCAGAAGAGCGGTCCAACCTGCCGCTGCTTTTCCACAGACACGTACTGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CAA 72 bp | GTTGGACCGCTCTTCTGCAGAAAACACTGTCCATGGTaGCAGTCGATGGTGCCATTCACGCCAGGTGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VGPLFCRKHCPW*QSMVPFTPGVQ Trigger: TTGCACACCTGGCGTGAATGGCACCATCGACTGCAACCATGGACAGTGTTTTCTGCAGAAGAGCGGTCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CAA 72 bp | AGACCCAGTACGTGTCTGTGGAAAAGCAGCGGCAGGTaGGACCGCTCTTCTGCAGAAAACACTGTCCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: RPSTCLWKSSGR*DRSSAENTVHG Trigger: ACCATGGACAGTGTTTTCTGCAGAAGAGCGGTCCAACCTGCCGCTGCTTTTCCACAGACACGTACTGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS GCA 72 bp | TTGGACCGCTCTTCTGCAGAAAACACTGTCCATGGTTaGAGTCGATGGTGCCATTCACGCCAGGTGTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LDRSSAENTVHG*SRWCHSRQVCN Trigger: ATTGCACACCTGGCGTGAATGGCACCATCGACTGCAACCATGGACAGTGTTTTCTGCAGAAGAGCGGTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CCA 72 bp | GTTCCTCAAAACCCTTGGGAGCAGTTCGATGACAAATaGCTTCTGGAGTCAGATCTTTCTCAGTGCGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: VPQNPWEQFDDK*LLESDLSQCDC Trigger: ACAATCGCACTGAGAAAGATCTGACTCCAGAAGCCATTTGTCATCGAACTGCTCCCAAGGGTTTTGAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CCA 72 bp | AAAACCCTTGGGAGCAGTTCGATGACAAATGGCTTCTaGAGTCAGATCTTTCTCAGTGCGATTGTTCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: KTLGSSSMTNGF*SQIFLSAIVHL Trigger: AAGGTGAACAATCGCACTGAGAAAGATCTGACTCCAGAAGCCATTTGTCATCGAACTGCTCCCAAGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CCA 72 bp | AGGCTACCTCAGGTCTTTGGATGTGAACCATCATGTTaGTATCCACCTTCTCCAAGGCAACATGGAAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLPQVFGCEPSC*YPPSPRQHGSF Trigger: AAAACTTCCATGTTGCCTTGGAGAAGGTGGATACCAACATGATGGTTCACATCCAAAGACCTGAGGTAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||
| CDS CAA 72 bp | CAAATGGCTTCTGGAGTCAGATCTTTCTCAGTGCGATaGTTCACCTTGATGGAGTCAGACTTAAAACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: QMASGVRSFSVR*FTLMESDLKHS Trigger: GCTGTGTTTTAAGTCTGACTCCATCAAGGTGAACAATCGCACTGAGAAAGATCTGACTCCAGAAGCCATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179412.2 ENSMUST00000196391.5 |
||