Pregenerated sensors for MUC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037390Ensembl transcript IDs: ENSMUST00000041226.11
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGCCTACCATCGTAACATaGCCACTGCAGTTTCCATAC | + |
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Preference number: 2 (lower is better) Translates to: DGSGPGTVLGADCRTTGRPTIVT*PLQFPY Trigger: GTATGGAAACTGCAGTGGTCATGTTACGATGGTAGG...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| 3UTR CAA 90 bp | CCAAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTaGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: PKLKQPTMAAGQALS*VLIAGPRVGDISGH Trigger: ATGCCCAGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTCCCATTCTAGGTAACTaGAGGGTCTATTTCCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: GQALSLVLIAGPRVGDISPILGN*RVYFPV Trigger: TACTGGGAAATAGACCCTGCAGTTACCTAGAATGGG...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATAGACATCTCTGGGCATaGGATTCTGGGAGGTTTCGC | + |
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Preference number: 2 (lower is better) Translates to: KVKTTDDGSGPGTVLGADRHLWA*DSGRFR Trigger: GCGAAACCTCCCAGAATCCCATGCCCAGAGATGTCT...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATCCCAGTAAGTCTCTATaGGGAATTCTCAATGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: KVKTTDDGSGPGTVLGADPSKSL*GILNVG Trigger: CCCTACATTGAGAATTCCGCATAGAGACTTACTGGG...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| 3UTR GCA 72 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTaGCGGACCACGGGTAGGAGACATCTCTGGGCATGG | + |
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Preference number: 3 (lower is better) Translates to: DGSGPGTVLGAD*RTTGRRHLWAW Trigger: CCATGCCCAGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| 3UTR TCA 72 bp | ATGGGATTCTGGGAGGTTTCGCCTACCATCGTAACATaGCCACTGCAGTTTCCATACTGTCGGCGCTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: MGFWEVSPTIVT*PLQFPYCRRFQ Trigger: CTGGAAGCGCCGACAGTATGGAAACTGCAGTGGTCATGTTACGATGGTAGGCGAAACCTCCCAGAATCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| 3UTR GCA 72 bp | TCCAGCATCATCTCTCTGGTACCCATTCTAGGTAACTaGAGGGTCTATTTCCCAGTAAGTCTCTATGCGGAA | + |
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Preference number: 3 (lower is better) Translates to: SSIISLVPILGN*RVYFPVSLYAE Trigger: TTCCGCATAGAGACTTACTGGGAAATAGACCCTGCAGTTACCTAGAATGGGTACCAGAGAGATGATGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAAGAGGCTGGTGCACTaGCATTTGAGCCCGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: DGSGPGTVLGADCRTTGRKRLVH*HLSPSH Trigger: GTGGGACGGGCTCAAATGTCAGTGCACCAGCCTCTT...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGCGTAGCTGCAGTTCTTaGAGGTGCTGTAGCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: DGSGPGTVLGADCRTTGRRSCSS*RCCSPQ Trigger: CTGCGGGCTACAGCACCTCCAAGAACTGCAGCTACG...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGCATCAGCAGTGGTTGTaGCATCAGCAGTGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: DGSGPGTVLGADCRTTGRHQQWL*HQQWRW Trigger: CCACCTCCACTGCTGATGTCACAACCACTGCTGATG...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGGAAGGTTCCGGGAGATaGTCTGCCTTCCTCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: DGSGPGTVLGADCRTTGREGSGR*SAFLFT Trigger: GGTGAAGAGGAAGGCAGAGCATCTCCCGGAACCTTC...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGCAGCAGTGGTGGTTGTaGCATCACCAGTTGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: DGSGPGTVLGADCRTTGRQQWWL*HHQLWS Trigger: AGACCACAACTGGTGATGGCACAACCACCACTGCTG...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| 3UTR CAA 72 bp | AAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTaGGTGCTGATTGCCGGACCACGGGTAGGAGACATC | + |
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Preference number: 4 (lower is better) Translates to: KQPTMAAGQALS*VLIAGPRVGDI Trigger: GATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGCATCAGCTGTTGTGGTaGCCTCATCAGTGGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: DGSGPGTVLGADCRTTGRHQLLW*PHQWLS Trigger: TGACAACCACTGATGAGGTCACCACAACAGCTGATG...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGCCTTCTGCCCCAGTGTaGCAAACTTTGCAAAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: DGSGPGTVLGADCRTTGRPSAPV*QTLQSP Trigger: AGGACTTTGCAAAGTTTGTCACACTGGGGCAGAAGG...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATCAGAGCGCGGCAGTCTaGCTCACCCACCTCCGCGTC | + |
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Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADQSAAV*LTHLRV Trigger: GACGCGGAGGTGGGTGAGGCAGACTGCCGCGCTCTG...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTAGCCGTTGGGGCAGATaGACTTGTCACCTGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GQALSLVLIAGPRVGDISSRWGR*TCHLSR Trigger: TCTGGACAGGTGACAAGTGCATCTGCCCCAACGGCT...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTCTGGTACTCCTGCCGTaGCCATGCCTCACTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: GQALSLVLIAGPRVGDISLVLLP*PCLTVF Trigger: GAAAACAGTGAGGCATGGCCACGGCAGGAGTACCAG...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTGGTCAGCAGTTGTGGTaGTATCAGCAGTTGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GQALSLVLIAGPRVGDISGQQLW*YQQLGS Trigger: AGACCCCAACTGCTGATATCACCACAACTGCTGACC...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTCATCATCAGTGGTTGTaGCTTCAGCAGTGGTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GQALSLVLIAGPRVGDISHHQWL*LQQWWR Trigger: TCGCCACCACTGCTGAAGTCACAACCACTGATGATG...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTCATGGTGGTGACATCTaGAGTGGTGGTGACATCACC | + |
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Preference number: 4 (lower is better) Translates to: GQALSLVLIAGPRVGDISHGGDI*SGGDIT Trigger: GGTGATGTCACCACCACTGCAGATGTCACCACCATG...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGGGTGATATCAGCAGTTaGGTTCTCTTCAGTAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: DGSGPGTVLGADCRTTGRGDISS*VLFSSG Trigger: ACCACTACTGAAGAGAACCCAACTGCTGATATCACC...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GGTGTGTTCCACCACGCTTGGCTAAACACGCTTCTCCTCAGTCCTCAGGTCCACCTTCAGCAGTTGTGGTaGGGTCAGCAGTTGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GVFHHAWLNTLLLSPQVHLQQLW*GQQLWS Trigger: GCTCCACAACTGCTGACCTCACCACAACTGCTGAAG...GTGGACCTGAGGACTGAGGAGAAGCGTGTTTAGCCAAGCGTGGTGGAACACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGTATCATCAGTGGTTGTaGTTTCAGCAGTGGTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: DGSGPGTVLGADCRTTGRYHQWL*FQQWWF Trigger: AAACCACCACTGCTGAAATCACAACCACTGATGATA...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGCATCAGAAGTGGTTGTaGTTTCAGAGGTGGTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: DGSGPGTVLGADCRTTGRHQKWL*FQRWLL Trigger: TAACAACCACCTCTGAAATCACAACCACTTCTGATG...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GGTGTGTTCCACCACGCTTGGCTAAACACGCTTCTCCTCAGTCCTCAGGTCCACGGTCAACAGTTGTGGTaGTGTCAGCAGTTGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GVFHHAWLNTLLLSPQVHGQQLW*CQQLGS Trigger: AGACCCCAACTGCTGACATCACCACAACTGTTGACC...GTGGACCTGAGGACTGAGGAGAAGCGTGTTTAGCCAAGCGTGGTGGAACACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GGTGTGTTCCACCACGCTTGGCTAAACACGCTTCTCCTCAGTCCTCAGGTCCACTTTCAGGTGTGGTGTTaGGGTCAGCAGTTGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GVFHHAWLNTLLLSPQVHFQVWC*GQQLWW Trigger: CCACCACAACTGCTGACCTCAACACCACACCTGAAA...GTGGACCTGAGGACTGAGGAGAAGCGTGTTTAGCCAAGCGTGGTGGAACACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGCTTCTGTTGCGTTCTTaGTTTTTGTCTCCAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: DGSGPGTVLGADCRTTGRLLLRS*FLSPGF Trigger: AAAACCTGGAGACAAAAATCAAGAACGCAACAGAAG...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTCTTCAGCCTTTGTGGTaGATGGGGAACTGGATCTTT | + |
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Preference number: 4 (lower is better) Translates to: GQALSLVLIAGPRVGDISLQPLW*MGNWIF Trigger: AAAGATCCAGTTCCCCATCCACCACAAAGGCTGAAG...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTGGTGATATCAGCAGTTaGGGTCTCTTCAGAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GQALSLVLIAGPRVGDISGDISS*GLFRSG Trigger: ACCACTTCTGAAGAGACCCCAACTGCTGATATCACC...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATCATCAGCAGTGGTGGTaGCTTCAGCCTTTGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADHQQWW*LQPLWW Trigger: CCACCACAAAGGCTGAAGTCACCACCACTGCTGATG...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GGTGTGTTCCACCACGCTTGGCTAAACACGCTTCTCCTCAGTCCTCAGGTCCACCTTCAGCAGTGGTTGTaGCTTCAGCAGTGGTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: GVFHHAWLNTLLLSPQVHLQQWL*LQQWWL Trigger: TAACCACCACTGCTGAAGTCACAACCACTGCTGAAG...GTGGACCTGAGGACTGAGGAGAAGCGTGTTTAGCCAAGCGTGGTGGAACACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATCATCAGCAGTGGTTGTaGCTTCAGCAGTGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADHQQWL*LQQWRW Trigger: CCACCTCCACTGCTGAAGTCACAACCACTGCTGATG...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTCTTCATACTCCGGTATaGCAGCATAAATCAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GQALSLVLIAGPRVGDISLHTPV*QHKSEP Trigger: TGGCTCTGATTTATGCTGGCATACCGGAGTATGAAG...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCAGTTCTTGGAGGTaGTGTAGCCCGCAGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADCSSWR*CSPQSK Trigger: CTTGCTCTGCGGGCTACAGCACCTCCAAGAACTGCA...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | GGTGTGTTCCACCACGCTTGGCTAAACACGCTTCTCCTCAGTCCTCAGGTCCACGGTGATGTCAGCAGTTaGGGTCTCTTCAGAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GVFHHAWLNTLLLSPQVHGDVSS*GLFRSG Trigger: ACCACTTCTGAAGAGACCCCAACTGCTGACATCACC...GTGGACCTGAGGACTGAGGAGAAGCGTGTTTAGCCAAGCGTGGTGGAACACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATCAGTTCCTCACACCGTaGCCCATAGAAGAGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADQFLTP*PIEEAG Trigger: ACCAGCCTCTTCTATGGGCCACGGTGTGAGGAACTG...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTTCAAAACCAAAGTTGTaGAAGGTTCCGGGAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: GQALSLVLIAGPRVGDISSKPKL*KVPGDA Trigger: AGCATCTCCCGGAACCTTCCACAACTTTGGTTTTGA...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATACTGTGGCACTGTTTTaGACCTTGGTGGCAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADTVALF*TLVAVE Trigger: CTCCACTGCCACCAAGGTGCAAAACAGTGCCACAGT...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | TTCTCCTCAGTCCTCAGGTCCACAGATCCATGCAAAACCGCTTTTGTGTTAGTGTGTCGGGGCAGGGAGTaGAGGATGAAAGCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FSSVLRSTDPCKTAFVLVCRGRE*RMKASR Trigger: CCTGCTGGCTTTCATCCTCCACTCCCTGCCCCGACA...CACTAACACAAAAGCGGTTTTGCATGGATCTGTGGACCTGAGGACTGAGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| 3UTR CAA 72 bp | TGCGGAATTCTCAATGTAGGGTGTGTTCCACCACGCTaGGCTAAACACGCTTCTCCTCAGTCCTCAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: CGILNVGCVPPR*AKHASPQSSGP Trigger: TGGACCTGAGGACTGAGGAGAAGCGTGTTTAGCCAAGCGTGGTGGAACACACCCTACATTGAGAATTCCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | TTCTCCTCAGTCCTCAGGTCCACAGATCCATGCAAAACCGCTTTTGTGTTAGTGCTTCAGCAGTGGTGGTaGGGTCAGCAGTTGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FSSVLRSTDPCKTAFVLVLQQWW*GQQLWS Trigger: GCTCCACAACTGCTGACCTCACCACCACTGCTGAAG...CACTAACACAAAAGCGGTTTTGCATGGATCTGTGGACCTGAGGACTGAGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATCAGCAGTGGTGGTTTTaGCATCACCAGTTGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADQQWWF*HHQLWS Trigger: AGACCACAACTGGTGATGGCAAAACCACCACTGCTG...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATCATTGTGGTGAGATCTaGAGTGGTGGTGACATCAGC | + |
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Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADHCGEI*SGGDIS Trigger: GCTGATGTCACCACCACTGCAGATCTCACCACAATG...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGGTGGATGGGGAACTaGATCTTTGCTGGTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADWWMGN*IFAGTP Trigger: AGGAGTACCAGCAAAGATCCAGTTCCCCATCCACCA...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | GCTTTGCTGATGGTAAAATGCAACCCAAAGTTAAAACAACCGACGATGGCAGCGATCAGGCAGAGGCACTaGGGTCCACTTCGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLMVKCNPKLKQPTMAAIRQRH*GPLRCS Trigger: GCTGCAGCGAAGTGGACCCCAGTGCCTCTGCCTGAT...CGCTGCCATCGTCGGTTGTTTTAACTTTGGGTTGCATTTTACCATCAGCAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATGATCATCAGTGGTTGTaGTTTCAGCAGTGGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADDHQWL*FQQWWL Trigger: CAACCACCACTGCTGAAATCACAACCACTGATGATC...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATCATCAGCAGTGGTTGTaGCATCAGCAGTTGTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADHQQWL*HQQLWL Trigger: TAACCACAACTGCTGATGTCACAACCACTGCTGATG...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | GCTTTGCTGATGGTAAAATGCAACCCAAAGTTAAAACAACCGACGATGGCAGCGCTTTGCTGGTACTCCTaGCGTGGCCATGCCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLMVKCNPKLKQPTMAALCWYS*RGHASL Trigger: CAGTGAGGCATGGCCACGGCAGGAGTACCAGCAAAG...CGCTGCCATCGTCGGTTGTTTTAACTTTGGGTTGCATTTTACCATCAGCAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATCATCATCAGTGGTTGTaGTTTCAGCAGTGGTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADHHQWL*FQQWWL Trigger: TAACCACCACTGCTGAAATCACAACCACTGATGATG...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTTACTTGAACTTCTGTTaGGTTCTTGATTTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQALSLVLIAGPRVGDISYLNFC*VLDFCL Trigger: GAGACAAAAATCAAGAACGCAACAGAAGTTCAAGTA...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | TTCTCCTCAGTCCTCAGGTCCACAGATCCATGCAAAACCGCTTTTGTGTTAGTGCTGGACCGTTGCCTTTaGGCATCTTTTCTGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSSVLRSTDPCKTAFVLVLDRCL*ASFLKR Trigger: CCGCTTCAGAAAAGATGCGCAAAGGCAACGGTCCAG...CACTAACACAAAAGCGGTTTTGCATGGATCTGTGGACCTGAGGACTGAGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | GCTTTGCTGATGGTAAAATGCAACCCAAAGTTAAAACAACCGACGATGGCAGCGTTCCGGGAGATGCTCTaGCTTCCTCTTCACCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ALLMVKCNPKLKQPTMAAFREML*LPLHPT Trigger: AGTGGGGTGAAGAGGAAGGCAGAGCATCTCCCGGAA...CGCTGCCATCGTCGGTTGTTTTAACTTTGGGTTGCATTTTACCATCAGCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATGGTAATATCAGCAGTTaGGGTCTCTTCAGAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVKTTDDGSGPGTVLGADGNISS*GLFRSG Trigger: ACCACTTCTGAAGAGACCCCAACTGCTGATATTACC...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GCTTTGCTGATGGTAAAATGCAACCCAAAGTTAAAACAACCGACGATGGCAGCGCATCAGCAGTTGTGGTaGCTTCAGCAGTGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLMVKCNPKLKQPTMAAHQQLW*LQQWWS Trigger: TGACCACCACTGCTGAAGTCACCACAACTGCTGATG...CGCTGCCATCGTCGGTTGTTTTAACTTTGGGTTGCATTTTACCATCAGCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | TTCTCCTCAGTCCTCAGGTCCACAGATCCATGCAAAACCGCTTTTGTGTTAGTGAGCCTTTGTGGTGGATaGGGAACTGGATCTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSSVLRSTDPCKTAFVLVSLCGG*GTGSLL Trigger: CAGCAAAGATCCAGTTCCCCATCCACCACAAAGGCT...CACTAACACAAAAGCGGTTTTGCATGGATCTGTGGACCTGAGGACTGAGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR GCA 90 bp | GCTTTGCTGATGGTAAAATGCAACCCAAAGTTAAAACAACCGACGATGGCAGCGTGTTGTGGTGACATCTaGAGTGGTGGTGACATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLMVKCNPKLKQPTMAACCGDI*SGGDIS Trigger: GCTGATGTCACCACCACTGCAGATGTCACCACAACA...CGCTGCCATCGTCGGTTGTTTTAACTTTGGGTTGCATTTTACCATCAGCAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CCA 90 bp | GCTTTGCTGATGGTAAAATGCAACCCAAAGTTAAAACAACCGACGATGGCAGCGCTTTCTGGGTTTATGTaGTTTAGGGAAGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLMVKCNPKLKQPTMAALSGFM*FREGWK Trigger: CTTCCAGCCTTCCCTAAACCACATAAACCCAGAAAG...CGCTGCCATCGTCGGTTGTTTTAACTTTGGGTTGCATTTTACCATCAGCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR TCA 90 bp | GCTTTGCTGATGGTAAAATGCAACCCAAAGTTAAAACAACCGACGATGGCAGCGAATCACCAGTGGTTGTaGTTTCAGGTGTGGTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: ALLMVKCNPKLKQPTMAANHQWL*FQVWLI Trigger: TATCAACCACACCTGAAATCACAACCACTGGTGATT...CGCTGCCATCGTCGGTTGTTTTAACTTTGGGTTGCATTTTACCATCAGCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS TCA 90 bp | TGGTCCCATTCTCAGCAGCAATGTGTCGGGGCAGGGAGTGGAGGATaGAAGCCAGCAGGCAGAGCGCGGCAGTCTGCCTCACCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WSHSQQQCVGAGSGG*KPAGRARQSASPTS Trigger: GGAGGTGGGTGAGGCAGACTGCCGCGCTCTGCCTGCTGGCTTTCATCCTCCACTCCCTGCCCCGACACATTGCTGCTGAGAATGGGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGTTTCAGCAGTGGTGGTaGTGCCATCACCAGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DGSGPGTVLGADCRTTGRFQQWW*CHHQLW Trigger: CCACAACTGGTGATGGCACAACCACCACTGCTGAAA...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGTCTCCAGCCTCCTTCTaGCATGTCTCCTCAGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: DGSGPGTVLGADCRTTGRSPASF*HVSSGL Trigger: CAATCCTGAGGAGACATGCAAGAAGGAGGCTGGAGA...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGTCCTCTTCACCCCACTaGTACATCTCAGACACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DGSGPGTVLGADCRTTGRSSSPH*YISDTL Trigger: CAGAGTGTCTGAGATGTACAAGTGGGGTGAAGAGGA...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 90 bp | GCGGATGGAGAACACGAGGAGGATCACGAGGATCACCAACAGCACTaGCACGCCGGCTCCCCCAAGTCCATACACCAGGCTTTTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ADGEHEEDHEDHQQH*HAGSPKSIHQAFLD Trigger: ATCCAGAAAAGCCTGGTGTATGGACTTGGGGGAGCCGGCGTGGCAGTGCTGTTGGTGATCCTCGTGATCCTCCTCGTGTTCTCCATCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 90 bp | CTTGGGTGCTATTTCCTCCTCCATCCCACACACTTCCGCTCTCGGTaGTCCCATTCTCAGCAGCAATGTGTCGGGGCAGGGAGTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGCYFLLHPTHFRSR*SHSQQQCVGAGSGG Trigger: TCCTCCACTCCCTGCCCCGACACATTGCTGCTGAGAATGGGACCACCGAGAGCGGAAGTGTGTGGGATGGAGGAGGAAATAGCACCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 90 bp | TCTTCAACACCGTCCGGAACTGAGTCTCCTGGCTGTCGTCTTGGGTaGTATTTCCTCCTCCATCCCACACACTTCCGCTCTCGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSTPSGTESPGCRLG*YFLLHPTHFRSRWS Trigger: GGACCACCGAGAGCGGAAGTGTGTGGGATGGAGGAGGAAATAGCACCCAAGACGACAGCCAGGAGACTCAGTTCCGGACGGTGTTGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 90 bp | CCAGAACCCTCCGTTCATACAATTCACGGCAGTAGTGGTAGGTGCTaGGGTGGTAGTGGGCTCAGGAGTGGTGGCAACTTCTGTAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PEPSVHTIHGSSGRC*GGSGLRSGGNFCSG Trigger: ACCACTACAGAAGTTGCCACCACTCCTGAGCCCACTACCACCCCAGCACCTACCACTACTGCCGTGAATTGTATGAACGGAGGGTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGCCTTTGCTCAGATTTTaGATGATAACCCCTTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: DGSGPGTVLGADCRTTGRPLLRF*MITPSY Trigger: GTATGAAGGGGTTATCATCAAAAATCTGAGCAAAGG...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTTGGTCAAAACCAAAGTaGTGGAAGGTTCCGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GQALSLVLIAGPRVGDISWSKPK*WKVPGD Trigger: ATCTCCCGGAACCTTCCACAACTTTGGTTTTGACCA...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 90 bp | TGTCCAGAACCCTCCGTTCATACAATTCACGGCAGTAGTGGTAGGTaGTGGGGTGGTAGTGGGCTCAGGAGTGGTGGCAACTTCTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: CPEPSVHTIHGSSGR*WGGSGLRSGGNFCS Trigger: ACTACAGAAGTTGCCACCACTCCTGAGCCCACTACCACCCCAGCACCTACCACTACTGCCGTGAATTGTATGAACGGAGGGTTCTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGAGACATCTCTGTGGTGACATCATCATaGGTTGTTACTTCAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GQALSLVLIAGPRVGDISVVTSS*VVTSAV Trigger: CACTGCTGAAGTAACAACCAATGATGATGTCACCAC...AGAGATGTCTCCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GGTGTGTTCCACCACGCTTGGCTAAACACGCTTCTCCTCAGTCCTCAGGTCCACGTGACATCACCAGTGTaGGTGAAGTCAGCAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GVFHHAWLNTLLLSPQVHVTSPV*VKSAVV Trigger: AACCACTGCTGACTTCACCAACACTGGTGATGTCAC...GTGGACCTGAGGACTGAGGAGAAGCGTGTTTAGCCAAGCGTGGTGGAACACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGATTGACATCTTGTACTaGAACTTCTGTTGCGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DGSGPGTVLGADCRTTGRIDILY*NFCCVL Trigger: AAGAACGCAACAGAAGTTCAAGTACAAGATGTCAAT...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GGTGTGTTCCACCACGCTTGGCTAAACACGCTTCTCCTCAGTCCTCAGGTCCACGCACTGTTTTGCACCTaGGTGGCAGTGGAGTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVFHHAWLNTLLLSPQVHALFCT*VAVELK Trigger: TTTCAACTCCACTGCCACCAAGGTGCAAAACAGTGC...GTGGACCTGAGGACTGAGGAGAAGCGTGTTTAGCCAAGCGTGGTGGAACACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTGCCGGACCACGGGTAGGTTTTCTCGTTCTTCATaGTGGTCAAAACCAAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGSGPGTVLGADCRTTGRFSRSS*WSKPKL Trigger: CAACTTTGGTTTTGACCACAATGAAGAACGAGAAAA...CCTACCCGTGGTCCGGCAATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 90 bp | CCTTCCTCTTCACCCCACTTGTACATCTCAGACACTCTGGACCGTTaGCTTTGCGCATCTTTTCTGAAGCGGATGGAGAACACGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSSPHLYISDTLDR*LCASFLKRMENTRR Trigger: CCTCCTCGTGTTCTCCATCCGCTTCAGAAAAGATGCGCAAAGGCAACGGTCCAGAGTGTCTGAGATGTACAAGTGGGGTGAAGAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATACATCAGCAGTGGTGTaGACAACACCAGTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVKTTDDGSGPGTVLGADTSAVV*TTPVVV Trigger: CACCACCACTGGTGTTGTCAACACCACTGCTGATGT...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 90 bp | GGTGACTTCACCTGTGGTGGTGACATCATCAGTCGTTGTGACTTCTaGAGTGGTGGTGAGGTCAGCAGTTGTGGTGATATCAGCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GDFTCGGDIISRCDF*SGGEVSSCGDISSW Trigger: CCAACTGCTGATATCACCACAACTGCTGACCTCACCACCACTGCAGAAGTCACAACGACTGATGATGTCACCACCACAGGTGAAGTCACC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 90 bp | GGTGGCTTCAGCAGTGGTTGTGACTTCAGCAGTGGTGGTTACTTCTaGAGTGGTTGTGACATCACCAGTAGTGGTGACATCAGCAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGFSSGCDFSSGGYF*SGCDITSSGDISSG Trigger: ACCACTGCTGATGTCACCACTACTGGTGATGTCACAACCACTGCAGAAGTAACCACCACTGCTGAAGTCACAACCACTGCTGAAGCCACC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | TTCTCCTCAGTCCTCAGGTCCACAGATCCATGCAAAACCGCTTTTGTGTTAGTGTGGCGAGGTCAGCAGTaGTGGAGGCATCAGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSVLRSTDPCKTAFVLVWRGQQ*WRHQLL Trigger: CAACAGCTGATGCCTCCACAACTGCTGACCTCGCCA...CACTAACACAAAAGCGGTTTTGCATGGATCTGTGGACCTGAGGACTGAGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATATTTCAGGTGTGGTGTaGAGGTTAGAGGTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVKTTDDGSGPGTVLGADISGVV*RLEVVV Trigger: CACCACCACCTCTAACCTCAACACCACACCTGAAAT...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 90 bp | CATTGTGGTCAAAACCAAAGTTGTGGAAGGTTCCGGGAGATGCTCTaGCTTCCTCTTCACCCCACTTGTACATCTCAGACACTCTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: HCGQNQSCGRFREML*LPLHPTCTSQTLWT Trigger: GGTCCAGAGTGTCTGAGATGTACAAGTGGGGTGAAGAGGAAGGCAGAGCATCTCCCGGAACCTTCCACAACTTTGGTTTTGACCACAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GGTGTGTTCCACCACGCTTGGCTAAACACGCTTCTCCTCAGTCCTCAGGTCCACCTTCTCACTGTATTCTaGACTGGTTACTGTCACACT | + |
|
Preference number: 5 (lower is better) Translates to: GVFHHAWLNTLLLSPQVHLLTVF*TGYCHT Trigger: AGTGTGACAGTAACCAGTCAAGAATACAGTGAGAAG...GTGGACCTGAGGACTGAGGAGAAGCGTGTTTAGCCAAGCGTGGTGGAACACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 90 bp | GATACAGAACCACTTATCGCCCTTCTGCCCCAGTGTGACAAACTTTaGAAAGTCCTCTCCAGCCTCCTTCTTGCATGTCTCCTCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: DTEPLIALLPQCDKL*KVLSSLLLACLLRI Trigger: AATCCTGAGGAGACATGCAAGAAGGAGGCTGGAGAGGACTTTGCAAAGTTTGTCACACTGGGGCAGAAGGGCGATAAGTGGTTCTGTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 90 bp | TTCAGCAGTGGTGGTGAGGTCAACAGTTGTGGTGATATCAGCAGTTaGGGTCTCTTCAGAAGTGGTGGTGGTATCACTAGTGGTTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSSGGEVNSCGDISS*GLFRSGGGITSGCD Trigger: GTCACAACCACTAGTGATACCACCACCACTTCTGAAGAGACCCCAACTGCTGATATCACCACAACTGTTGACCTCACCACCACTGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 90 bp | TTCTGCAGTGGTGGTGAGGTCAGCAGTTGTGGTGATATCAGCAGTTaGGGTCTCTTCAGAAGTGGTGGTGACATCATTAGTGGTTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FCSGGEVSSCGDISS*GLFRSGGDIISGCD Trigger: GTCACAACCACTAATGATGTCACCACCACTTCTGAAGAGACCCCAACTGCTGATATCACCACAACTGCTGACCTCACCACCACTGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
||
| CDS CCA 90 bp | TTCAGCAGTGGTGGTGAGGTCAGCAGTTGTGGTAATATCAGCAGTTaGGGTCTCTTCAGAAGTGGTGGTGACATCACTAGTGGTTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSSGGEVSSCGNISS*GLFRSGGDITSGCD Trigger: GTCACAACCACTAGTGATGTCACCACCACTTCTGAAGAGACCCCAACTGCTGATATTACCACAACTGCTGACCTCACCACCACTGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GCTTTGCTGATGGTAAAATGCAACCCAAAGTTAAAACAACCGACGATGGCAGCGGACTGTGGCACTGTTTaGCACCTTGGTGGCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALLMVKCNPKLKQPTMAADCGTV*HLGGSG Trigger: TCCACTGCCACCAAGGTGCAAAACAGTGCCACAGTC...CGCTGCCATCGTCGGTTGTTTTAACTTTGGGTTGCATTTTACCATCAGCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 90 bp | TTCTACAGTGGTGGTGAGGTCAACAGTTGTGGTGATGTCAGCAGTTaGGGTCTCTTCAGAAGTGGTGGTGATATCACTAGTGGTTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FYSGGEVNSCGDVSS*GLFRSGGDITSGCD Trigger: GTCACAACCACTAGTGATATCACCACCACTTCTGAAGAGACCCCAACTGCTGACATCACCACAACTGTTGACCTCACCACCACTGTAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GCTTTGCTGATGGTAAAATGCAACCCAAAGTTAAAACAACCGACGATGGCAGCGACTTCAGCAGTGGTGTaGAGGTCAGCAGTTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLMVKCNPKLKQPTMAATSAVV*RSAVVV Trigger: CACCACAACTGCTGACCTCAACACCACTGCTGAAGT...CGCTGCCATCGTCGGTTGTTTTAACTTTGGGTTGCATTTTACCATCAGCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | TTCTCCTCAGTCCTCAGGTCCACAGATCCATGCAAAACCGCTTTTGTGTTAGTGACATCATCAGTGGTGTaGACCTCAGCAGTAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSVLRSTDPCKTAFVLVTSSVV*TSAVVV Trigger: CACCACTACTGCTGAGGTCAACACCACTGATGATGT...CACTAACACAAAAGCGGTTTTGCATGGATCTGTGGACCTGAGGACTGAGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATTTTGTCTCCAGGTTTTaGACGACGGTATCTAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVKTTDDGSGPGTVLGADFVSRF*TTVSNV Trigger: CACATTAGATACCGTCGTCAAAAACCTGGAGACAAA...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | GCTTTGCTGATGGTAAAATGCAACCCAAAGTTAAAACAACCGACGATGGCAGCGTCTGGACCGTTGCCTTaGCGCATCTTTTCTGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ALLMVKCNPKLKQPTMAASGPLP*RIFSEA Trigger: CGCTTCAGAAAAGATGCGCAAAGGCAACGGTCCAGA...CGCTGCCATCGTCGGTTGTTTTAACTTTGGGTTGCATTTTACCATCAGCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS TCA 90 bp | GACATCACTAGTGGTTGTGACATCAGCAGTTGTGGTGACTTCACCTaGGGTGGTGACAATATCAGTGGTTGTGATTTCAGCAGTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DITSGCDISSCGDFT*GGDNISGCDFSSGG Trigger: ACCACCACTGCTGAAATCACAACCACTGATATTGTCACCACCTCAGGTGAAGTCACCACAACTGCTGATGTCACAACCACTAGTGATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 90 bp | TTCTTCATTGTGGTCAAAACCAAAGTTGTGGAAGGTTCCGGGAGATaGTCTGCCTTCCTCTTCACCCCACTTGTACATCTCAGACACTCT | + |
|
Preference number: 5 (lower is better) Translates to: FFIVVKTKVVEGSGR*SAFLFTPLVHLRHS Trigger: AGAGTGTCTGAGATGTACAAGTGGGGTGAAGAGGAAGGCAGAGCATCTCCCGGAACCTTCCACAACTTTGGTTTTGACCACAATGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | AAAGTTAAAACAACCGACGATGGCAGCGGGCCAGGCACTGTCCTTGGTGCTGATACTTCTGTTGCGTTCTaGATTTTTGTCTCCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KVKTTDDGSGPGTVLGADTSVAF*IFVSRF Trigger: AAACCTGGAGACAAAAATCAAGAACGCAACAGAAGT...ATCAGCACCAAGGACAGTGCCTGGCCCGCTGCCATCGTCGGTTGTTTTAACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS-3UTR CAA 90 bp | TTCTCCTCAGTCCTCAGGTCCACAGATCCATGCAAAACCGCTTTTGTGTTAGTGACCACGATACTGCCTTaGCTCAGATTTTTGATGATA | + |
|
Preference number: 5 (lower is better) Translates to: FSSVLRSTDPCKTAFVLVTTILP*LRFLMI Trigger: TATCATCAAAAATCTGAGCAAAGGCAGTATCGTGGT...CACTAACACAAAAGCGGTTTTGCATGGATCTGTGGACCTGAGGACTGAGGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | GAACACGAGGAGGATCACGAGGATCACCAACAGCACTaGCACGCCGGCTCCCCCAAGTCCATACACCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EHEEDHEDHQQH*HAGSPKSIHQA Trigger: AGCCTGGTGTATGGACTTGGGGGAGCCGGCGTGGCAGTGCTGTTGGTGATCCTCGTGATCCTCCTCGTGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | CCGTCCGGAACTGAGTCTCCTGGCTGTCGTCTTGGGTaGTATTTCCTCCTCCATCCCACACACTTCCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSGTESPGCRLG*YFLLHPTHFRS Trigger: AGAGCGGAAGTGTGTGGGATGGAGGAGGAAATAGCACCCAAGACGACAGCCAGGAGACTCAGTTCCGGACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 72 bp | TATTTCCTCCTCCATCCCACACACTTCCGCTCTCGGTaGTCCCATTCTCAGCAGCAATGTGTCGGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: YFLLHPTHFRSR*SHSQQQCVGAG Trigger: CCCTGCCCCGACACATTGCTGCTGAGAATGGGACCACCGAGAGCGGAAGTGTGTGGGATGGAGGAGGAAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS TCA 72 bp | AGTTCTTGGAGGTGCTGTAGCCCGCAGAGCAAGGCGTaGTACAGAACCACTTATCGCCCTTCTGCCCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSWRCCSPQSKA*YRTTYRPSAPV Trigger: CACTGGGGCAGAAGGGCGATAAGTGGTTCTGTATCACGCCTTGCTCTGCGGGCTACAGCACCTCCAAGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 72 bp | CAACACCGTCCGGAACTGAGTCTCCTGGCTGTCGTCTaGGGTGCTATTTCCTCCTCCATCCCACACACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QHRPELSLLAVV*GAISSSIPHTS Trigger: GGAAGTGTGTGGGATGGAGGAGGAAATAGCACCCAAGACGACAGCCAGGAGACTCAGTTCCGGACGGTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 72 bp | ATCAGCAGTGGTGGTGACTTCAGCCTTTGTGGTGGATaGGGAACTGGATCTTTGCTGGTACTCCTGCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ISSGGDFSLCGG*GTGSLLVLLPW Trigger: CCACGGCAGGAGTACCAGCAAAGATCCAGTTCCCCATCCACCACAAAGGCTGAAGTCACCACCACTGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 72 bp | GACTTCAGCCTTTGTGGTGGATGGGGAACTGGATCTTaGCTGGTACTCCTGCCGTGGCCATGCCTCACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: DFSLCGGWGTGS*LVLLPWPCLTV Trigger: AACAGTGAGGCATGGCCACGGCAGGAGTACCAGCAAAGATCCAGTTCCCCATCCACCACAAAGGCTGAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 72 bp | CATTTGAGCCCGTCCCACGTGCCTCCATTCTCGCAGTaGACCACGTTGACTATATTCTCACAGCGATCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: HLSPSHVPPFSQ*TTLTIFSQRSP Trigger: GGGGGATCGCTGTGAGAATATAGTCAACGTGGTCAACTGCGAGAATGGAGGCACGTGGGACGGGCTCAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 72 bp | GTTCCGGGAGATGCTCTGCCTTCCTCTTCACCCCACTaGTACATCTCAGACACTCTGGACCGTTGCCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VPGDALPSSSPH*YISDTLDRCLC Trigger: GCAAAGGCAACGGTCCAGAGTGTCTGAGATGTACAAGTGGGGTGAAGAGGAAGGCAGAGCATCTCCCGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS TCA 72 bp | CCGTCTGTGGTTTTGGTCTTCAACACCGTCCGGAACTaGGTCTCCTGGCTGTCGTCTTGGGTGCTATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSVVLVFNTVRN*VSWLSSWVLFP Trigger: AGGAAATAGCACCCAAGACGACAGCCAGGAGACTCAGTTCCGGACGGTGTTGAAGACCAAAACCACAGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | ACTTCAGCCTTTGTGGTGGATGGGGAACTGGATCTTTaGTGGTACTCCTGCCGTGGCCATGCCTCACTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TSAFVVDGELDL*WYSCRGHASLF Trigger: AAACAGTGAGGCATGGCCACGGCAGGAGTACCAGCAAAGATCCAGTTCCCCATCCACCACAAAGGCTGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 90 bp | GCCTTCCTCTTCACCCCACTTGTACATCTCAGACACTCTGGACCGTaGCCTTTGCGCATCTTTTCTGAAGCGGATGGAGAACACGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AFLFTPLVHLRHSGP*PLRIFSEADGEHEE Trigger: CTCCTCGTGTTCTCCATCCGCTTCAGAAAAGATGCGCAAAGGCAACGGTCCAGAGTGTCTGAGATGTACAAGTGGGGTGAAGAGGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | CCACTTATCGCCCTTCTGCCCCAGTGTGACAAACTTTaGAAAGTCCTCTCCAGCCTCCTTCTTGCATGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLIALLPQCDKL*KVLSSLLLACL Trigger: GAGACATGCAAGAAGGAGGCTGGAGAGGACTTTGCAAAGTTTGTCACACTGGGGCAGAAGGGCGATAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 72 bp | GGTGGTGAGGTCAGCAGTTGTGGTGATATCAGCAGTTaGGGTCTCTTCAGAAGTGGTGGTGACATCACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GGEVSSCGDISS*GLFRSGGDITS Trigger: GCTAGTGATGTCACCACCACTTCTGAAGAGACCCCAACTGCTGATATCACCACAACTGCTGACCTCACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 72 bp | GTGACATCAGCTGTGGTGGTGACATCAGCAGTGGTGTaGACAACACCAGTGGTGGTGAAGTCAGCAGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VTSAVVVTSAVV*TTPVVVKSAVV Trigger: AACCACTGCTGACTTCACCACCACTGGTGTTGTCAACACCACTGCTGATGTCACCACCACAGCTGATGTCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 72 bp | TCCTCTCCAGCCTCCTTCTTGCATGTCTCCTCAGGATaGACACTGACTGTGGCACTGTTTTGCACCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSPASFLHVSSG*TLTVALFCTLV Trigger: CACCAAGGTGCAAAACAGTGCCACAGTCAGTGTCAATCCTGAGGAGACATGCAAGAAGGAGGCTGGAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | ATCATCAGTGGGTGTGATTTCACCAGTGGTTGTGACTaGAGCAGTGGTGGTGACATCAGGAGTTGTGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: IISGCDFTSGCD*SSGGDIRSCGD Trigger: GTCACCACAACTCCTGATGTCACCACCACTGCTGCAGTCACAACCACTGGTGAAATCACACCCACTGATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | ACCTGTGGTGGTGACATCATCAGTCGTTGTGACTTCTaGAGTGGTGGTGAGGTCAGCAGTTGTGGTGATATC | + |
|
Preference number: 6 (lower is better) Translates to: TCGGDIISRCDF*SGGEVSSCGDI Trigger: GATATCACCACAACTGCTGACCTCACCACCACTGCAGAAGTCACAACGACTGATGATGTCACCACCACAGGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | ATCATCAGTGGGTGTGATTTCAGCAGTGGTTGTGACTaGAGCAGTGGTGGTGACATCAGGAGTTGTGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: IISGCDFSSGCD*SSGGDIRSCGD Trigger: GTCACCACAACTCCTGATGTCACCACCACTGCTGCAGTCACAACCACTGCTGAAATCACACCCACTGATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | AGCTGTAGTGGTGACATCAGCCATGGTGGTGACATCTaGAGTGGTGGTGACATCACCAGTGGTGATGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: SCSGDISHGGDI*SGGDITSGDEI Trigger: GATTTCATCACCACTGGTGATGTCACCACCACTGCAGATGTCACCACCATGGCTGATGTCACCACTACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | CACTTGTACATCTCAGACACTCTGGACCGTTGCCTTTaGGCATCTTTTCTGAAGCGGATGGAGAACACGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HLYISDTLDRCL*ASFLKRMENTR Trigger: CCTCGTGTTCTCCATCCGCTTCAGAAAAGATGCGCAAAGGCAACGGTCCAGAGTGTCTGAGATGTACAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | TCACCCCACTTGTACATCTCAGACACTCTGGACCGTTaGCTTTGCGCATCTTTTCTGAAGCGGATGGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SPHLYISDTLDR*LCASFLKRMEN Trigger: GTTCTCCATCCGCTTCAGAAAAGATGCGCAAAGGCAACGGTCCAGAGTGTCTGAGATGTACAAGTGGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | GTGGTCAAAACCAAAGTTGTGGAAGGTTCCGGGAGATaGTCTGCCTTCCTCTTCACCCCACTTGTACATCTC | + |
|
Preference number: 6 (lower is better) Translates to: VVKTKVVEGSGR*SAFLFTPLVHL Trigger: GAGATGTACAAGTGGGGTGAAGAGGAAGGCAGAGCATCTCCCGGAACCTTCCACAACTTTGGTTTTGACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 72 bp | GGTGGTGAGGTCAGCAGTTGTGGTGATATCAGCAGTTaGGGTCTCTTCAGAAGTGGTGGTGACATCACTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGEVSSCGDISS*GLFRSGGDITS Trigger: ACTAGTGATGTCACCACCACTTCTGAAGAGACCCCAACTGCTGATATCACCACAACTGCTGACCTCACCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 72 bp | GGTGGTGAGGTCAGCAGTTGTGGTGATATCAGCAGTTaGGGTCTGTTCAGAAGTGGTGGTGACATCACTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGEVSSCGDISS*GLFRSGGDITS Trigger: ACTAGTGATGTCACCACCACTTCTGAACAGACCCCAACTGCTGATATCACCACAACTGCTGACCTCACCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 72 bp | CCACTTGTACATCTCAGACACTCTGGACCGTTGCCTTaGCGCATCTTTTCTGAAGCGGATGGAGAACACGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLVHLRHSGPLP*RIFSEADGEHE Trigger: CTCGTGTTCTCCATCCGCTTCAGAAAAGATGCGCAAAGGCAACGGTCCAGAGTGTCTGAGATGTACAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 90 bp | ACAGTGGTGGTGACATCTTCAGTGGTTGTGACTTCAGCAGTGGTGTaGAGGTCAGCAGTTGTGGTGATATCAGCAGTTGGGGTCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TVVVTSSVVVTSAVV*RSAVVVISAVGVSS Trigger: TGAAGAGACCCCAACTGCTGATATCACCACAACTGCTGACCTCAACACCACTGCTGAAGTCACAACCACTGAAGATGTCACCACCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | AGCAGTGGTGGTGACATCACTAGTGGTTGTGATATCTaGAGTTGTGGTGACATCAGCAGTGGTGGTGACATC | + |
|
Preference number: 6 (lower is better) Translates to: SSGGDITSGCDI*SCGDISSGGDI Trigger: GATGTCACCACCACTGCTGATGTCACCACAACTGCAGATATCACAACCACTAGTGATGTCACCACCACTGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | AGCAGTGGTTGTGACTTCAGCAGTGGTGGTTACTTCTaGAGTGGTTGTGACATCACCAGTAGTGGTGACATC | + |
|
Preference number: 6 (lower is better) Translates to: SSGCDFSSGGYF*SGCDITSSGDI Trigger: GATGTCACCACTACTGGTGATGTCACAACCACTGCAGAAGTAACCACCACTGCTGAAGTCACAACCACTGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS GCA 72 bp | AATAGTGGTTGTGACATCAGCTGTTGTGGTGACATCTaGAGTGGTGGTGACATCAGCAGTGGTGGTGACATC | + |
|
Preference number: 6 (lower is better) Translates to: NSGCDISCCGDI*SGGDISSGGDI Trigger: GATGTCACCACCACTGCTGATGTCACCACCACTGCAGATGTCACCACAACAGCTGATGTCACAACCACTATT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 72 bp | GGTGGTGAGGTCAGCAGTTGTGGTGATATCAGCAGTTaGGTTCTCTTCAGTAGTGGTGGTGACATCACTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGEVSSCGDISS*VLFSSGGDITS Trigger: ACTAGTGATGTCACCACCACTACTGAAGAGAACCCAACTGCTGATATCACCACAACTGCTGACCTCACCACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CCA 72 bp | GGTGGTGAGGTCAGCAGTTGTGGTGATATCAGCAGTTaGGGTCTCTTCAGAAGTGGTGGTGACATCATTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGEVSSCGDISS*GLFRSGGDIIS Trigger: ACTAATGATGTCACCACCACTTCTGAAGAGACCCCAACTGCTGATATCACCACAACTGCTGACCTCACCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 72 bp | GTGACATCTTCAGTGGTTGTGACTTCAGCAGTGGTGTaGAGGTCAGCAGTTGTGGTGATATCAGCAGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VTSSVVVTSAVV*RSAVVVISAVG Trigger: CCCAACTGCTGATATCACCACAACTGCTGACCTCAACACCACTGCTGAAGTCACAACCACTGAAGATGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 72 bp | GTGACAAACTTTGCAAAGTCCTCTCCAGCCTCCTTCTaGCATGTCTCCTCAGGATTGACACTGACTGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VTNFAKSSPASF*HVSSGLTLTVA Trigger: TGCCACAGTCAGTGTCAATCCTGAGGAGACATGCAAGAAGGAGGCTGGAGAGGACTTTGCAAAGTTTGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 72 bp | TTCACCCCACTTGTACATCTCAGACACTCTGGACCGTaGCCTTTGCGCATCTTTTCTGAAGCGGATGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FTPLVHLRHSGP*PLRIFSEADGE Trigger: TTCTCCATCCGCTTCAGAAAAGATGCGCAAAGGCAACGGTCCAGAGTGTCTGAGATGTACAAGTGGGGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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| CDS CAA 72 bp | GTTGTGGTGACATCATCAGTGGTTGTGAAGTCAGCTTaGGTGGTTACATCAGCCGTTGTGGTGAGATCACCA | + |
|
Preference number: 6 (lower is better) Translates to: VVVTSSVVVKSA*VVTSAVVVRSP Trigger: TGGTGATCTCACCACAACGGCTGATGTAACCACCAAAGCTGACTTCACAACCACTGATGATGTCACCACAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
||
| CDS TCA 72 bp | AGTGGTTGTGACATCAGCAGTTGTGGTGACTTCACCTaGGGTGGTGACAATATCAGTGGTTGTGATTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGCDISSCGDFT*GGDNISGCDFS Trigger: GCTGAAATCACAACCACTGATATTGTCACCACCTCAGGTGAAGTCACCACAACTGCTGATGTCACAACCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
||
| CDS CAA 72 bp | GTGAAATCAATAGTGGTTGTGATTTCAGGTGTGGTGTaGAGGTTAGAGGTGGTGGTGACCTCAGAAGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VKSIVVVISGVV*RLEVVVTSEVV Trigger: CACCACTTCTGAGGTCACCACCACCTCTAACCTCAACACCACACCTGAAATCACAACCACTATTGATTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
||
| CDS CAA 72 bp | TCAGGATTGACACTGACTGTGGCACTGTTTTGCACCTaGGTGGCAGTGGAGTTGAAACACAGTAAAGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SGLTLTVALFCT*VAVELKHSKAE Trigger: TTCAGCTTTACTGTGTTTCAACTCCACTGCCACCAAGGTGCAAAACAGTGCCACAGTCAGTGTCAATCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
||
| CDS CAA 90 bp | CATGTCTCCTCAGGATTGACACTGACTGTGGCACTGTTTTGCACCTaGGTGGCAGTGGAGTTGAAACACAGTAAAGCTGAACAGTTATTA | + |
|
Preference number: 6 (lower is better) Translates to: HVSSGLTLTVALFCT*VAVELKHSKAEQLL Trigger: TAATAACTGTTCAGCTTTACTGTGTTTCAACTCCACTGCCACCAAGGTGCAAAACAGTGCCACAGTCAGTGTCAATCCTGAGGAGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
||
| CDS TCA 72 bp | TGTTTTCAAATCCTGGGGTGTACTTGGCCTTCAGGATaGCATCATAATCCACCACGATACTGCCTTTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CFQILGCTWPSG*HHNPPRYCLCS Trigger: TGAGCAAAGGCAGTATCGTGGTGGATTATGATGTCATCCTGAAGGCCAAGTACACCCCAGGATTTGAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
||
| CDS CAA 90 bp | TTGACACTGACTGTGGCACTGTTTTGCACCTTGGTGGCAGTGGAGTaGAAACACAGTAAAGCTGAACAGTTATTATTGACATCTTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: LTLTVALFCTLVAVE*KHSKAEQLLLTSCT Trigger: AGTACAAGATGTCAATAATAACTGTTCAGCTTTACTGTGTTTCAACTCCACTGCCACCAAGGTGCAAAACAGTGCCACAGTCAGTGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
||
| CDS CAA 72 bp | ATCAGAAGTGGTTGTGATTTCGGAAGTTGTTGTGATTaGTACAGTGGTTGTGACATCATCAGTGGTTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: IRSGCDFGSCCD*YSGCDIISGCD Trigger: GTCACAACCACTGATGATGTCACAACCACTGTACAAATCACAACAACTTCCGAAATCACAACCACTTCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041226.11 |
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