Pregenerated sensors for MUC20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035638Ensembl transcript IDs: ENSMUST00000041123.9, ENSMUST00000115116.8
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGTCCATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTaGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCC | + |
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Preference number: 1 (lower is better) Translates to: GVHSTELWLWSVGSV*ASVASPFFWHRGHA Trigger: GGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| 3UTR TCA 90 bp | GATTCGCACTCTCTGGCTGCTATATGGCAGAAGTCACCTCCTCCCTaGTTCCCCAAAGGGCACAGGGACCCCTCTGATACCATGACCTCG | + |
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Preference number: 1 (lower is better) Translates to: DSHSLAAIWQKSPPP*FPKGHRDPSDTMTS Trigger: CGAGGTCATGGTATCAGAGGGGTCCCTGTGCCCTTTGGGGAATCAGGGAGGAGGTGACTTCTGCCATATAGCAGCCAGAGAGTGCGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR TCA 90 bp | TTGTGGTCAGGTATGGGGGAGGGCTCTCGAGCCAGCTGGCCTTCATaGGAAACTTTGGAGTCCATAGCACAGAACTGTGGCTGTGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: LWSGMGEGSRASWPS*ETLESIAQNCGCGL Trigger: CAGACCACAGCCACAGTTCTGTGCTATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAGCCCTCCCCCATACCTGACCACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| 3UTR CCA 90 bp | CACTCCAGTCTGTCCCTCTGGGTACTCCTCATGATTCGCACTCTCTaGCTGCTATATGGCAGAAGTCACCTCCTCCCTGATTCCCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: HSSLSLWVLLMIRTL*LLYGRSHLLPDSPK Trigger: CTTTGGGGAATCAGGGAGGAGGTGACTTCTGCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGTACCCAGAGGGACAGACTGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR GCA 90 bp | AAAGAGGGGGAGCCTCTTGCCCAGGGGTCGTTCAAGGGCCTAGGATaGCAGGAAGCTTCAGGATTAGAGACCACAGAATGTGTTAGAATC | + |
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Preference number: 1 (lower is better) Translates to: KEGEPLAQGSFKGLG*QEASGLETTECVRI Trigger: GATTCTAACACATTCTGTGGTCTCTAATCCTGAAGCTTCCTGGCATCCTAGGCCCTTGAACGACCCCTGGGCAAGAGGCTCCCCCTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR TCA 90 bp | GCCGCACAGGATAGAAGTTGGATAAGTCTGGGAACCCTCTGGGTCTaGGATGGGTCTTCTTTATCTCCAGAGCTTCCCTTAAGGACCATC | + |
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Preference number: 1 (lower is better) Translates to: AAQDRSWISLGTLWV*DGSSLSPELPLRTI Trigger: GATGGTCCTTAAGGGAAGCTCTGGAGATAAAGAAGACCCATCTCAGACCCAGAGGGTTCCCAGACTTATCCAACTTCTATCCTGTGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTAAGGACCATCGTGCTCTCTCTCAGGGAGGATGAAAATGCCTCCGCCGCTACCCAGGTCAGTCACTaGCCTGAGCCTGGGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PLRTIVLSLREDENASAATQVSH*PEPGCG Trigger: CCCACACCCAGGCTCAGGTCAGTGACTGACCTGGGT...AGCGGCGGAGGCATTTTCATCCTCCCTGAGAGAGAGCACGATGGTCCTTAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CAA 90 bp | CGTCAACGCCTCGGTCAGTGCTGGGCTCCCAGTGGGAAGTGGATCTaGAAAGGGTCTCCCAGGGACCTTGCAGTAGCTTACACATCCTTC | + |
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Preference number: 2 (lower is better) Translates to: RQRLGQCWAPSGKWI*KGSPRDLAVAYTSF Trigger: GAAGGATGTGTAAGCTACTGCAAGGTCCCTGGGAGACCCTTTCAAGATCCACTTCCCACTGGGAGCCCAGCACTGACCGAGGCGTTGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTCGTTAAGTCACCTCCTCCCTaGTTCCCCAAAGGGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: PSATLISQRGGASCPGVVKSPPP*FPKGHR Trigger: CCTGTGCCCTTTGGGGAATCAGGGAGGAGGTGACTT...AACGACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTCGTTTCTGGGTACTCCTCATaGTTCGCACTCTCTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PSATLISQRGGASCPGVVSGYSS*FALSGC Trigger: GCAGCCAGAGAGTGCGAATCATGAGGAGTACCCAGA...AACGACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR-3UTR CCA 90 bp | ACATCCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTTCTCTGGCTGCTATATaGCAGAAGTCACCTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TSFSYLNFPKRGSLLPRGSLAAI*QKSPPP Trigger: GGGAGGAGGTGACTTCTGCCATATAGCAGCCAGAGA...ACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTGGGAAGTGGATCTTGAAAGGGTCTCCCAGGGACCTTGCAGTAGCTTACTTCATCTGCTGCCCTTaGCCAAAGGCTCTTTGGATA | + |
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Preference number: 2 (lower is better) Translates to: PSGKWILKGSPRDLAVAYFICCP*PKALWI Trigger: TATCCAAAGAGCCTTTGGTCAAGGGCAGCAGATGAA...GTAAGCTACTGCAAGGTCCCTGGGAGACCCTTTCAAGATCCACTTCCCACTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR-3UTR GCA 90 bp | CATCCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTCTTCAAGGGCCTAGGATaGCAGGAAGCTTCAGGATTA | + |
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Preference number: 2 (lower is better) Translates to: HPSATLISQRGGASCPGVFKGLG*QEASGL Trigger: TAATCCTGAAGCTTCCTGGCATCCTAGGCCCTTGAA...GACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTCATGATTCGCACTCTCTGGCTGCTATATGGCAGAAGTCACCTCCTCCCCCCCTGGCAACATTATaGCAGAAGGGAAGAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: TPHDSHSLAAIWQKSPPPPLATL*QKGRMP Trigger: TGGCATTCTTCCCTTCTGCCATAATGTTGCCAGGGG...GGGAGGAGGTGACTTCTGCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTCGTTCAATTAGAATCACCAGCTTaGCCTGAGAAGAATCTCGGG | + |
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Preference number: 2 (lower is better) Translates to: SATLISQRGGASCPGVVQLESPA*PEKNLG Trigger: CCCGAGATTCTTCTCAGGGCAAGCTGGTGATTCTAA...TTGAACGACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGTCTGTCCCTCTGGGTACTCCTCATGATTCGCACTCTCTGGCTGCTATATGACTGGGATCAGAGATaGAGCAGAGATGTTCGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SSLSLWVLLMIRTLWLLYDWDQR*SRDVRL Trigger: GAGACGAACATCTCTGCTCCATCTCTGATCCCAGTC...ATATAGCAGCCAGAGAGTGCGAATCATGAGGAGTACCCAGAGGGACAGACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR-3UTR TCA 90 bp | CTCGTCTATATCCCCATTAAGCAAAGTAGCCAGATTGGTGAATGGCAGGACCTCTTTGGATATAACAGGTaGCATTCCTGGCACCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LVYIPIKQSSQIGEWQDLFGYNR*HSWHLD Trigger: GTCCAGGTGCCAGGAATGTCACCTGTTATATCCAAA...GAGGTCCTGCCATTCACCAATCTGGCTACTTTGCTTAATGGGGATATAGACGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CCA 72 bp | GGCTGGGTAGAAAAGCTCACGTTTACACAGACGGCCTaGCCAGCACAGGAGCAGCGGGGCGCTGGCTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: GWVEKLTFTQTA*PAQEQRGAGFQ Trigger: CTGAAAGCCAGCGCCCCGCTGCTCCTGTGCTGGCCAGGCCGTCTGTGTAAACGTGAGCTTTTCTACCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CCA 72 bp | CTGACGTCAACGCCTCGGTCAGTGCTGGGCTCCCAGTaGGAAGTGGATCTTGAAAGGGTCTCCCAGGGACCT | + |
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Preference number: 3 (lower is better) Translates to: LTSTPRSVLGSQ*EVDLERVSQGP Trigger: AGGTCCCTGGGAGACCCTTTCAAGATCCACTTCCCACTGGGAGCCCAGCACTGACCGAGGCGTTGACGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CCA 72 bp | GGTAGCGTTTGGGCCTCGGTGGCATCACCGTTCTTCTaGCACAGAGGCCATGCCTGGTTGCAGCTAGCATTC | + |
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Preference number: 3 (lower is better) Translates to: GSVWASVASPFF*HRGHAWLQLAF Trigger: GAATGCTAGCTGCAACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAACGCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| 3UTR CCA 72 bp | CCCGGAGCACAGCCCTCGAGCAAGTCCATTCATCACTaGAAGGTCACCTCCCACTTCAAGTACCGTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PGAQPSSKSIHH*KVTSHFKYRPR Trigger: CCTGGGACGGTACTTGAAGTGGGAGGTGACCTTCCAGTGATGAATGGACTTGCTCGAGGGCTGTGCTCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CCA 72 bp | CAACGCCTCGGTCAGTGCTGGGCTCCCAGTGGGAAGTaGATCTTGAAAGGGTCTCCCAGGGACCTTGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: QRLGQCWAPSGK*ILKGSPRDLAV Trigger: TACTGCAAGGTCCCTGGGAGACCCTTTCAAGATCCACTTCCCACTGGGAGCCCAGCACTGACCGAGGCGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR TCA 72 bp | TCTCTGGCTGCTATATGGCAGAAGTCACCTCCTCCCTaGTTCCCCAAAGGGCACAGGGACCCCTCTGATACC | + |
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Preference number: 3 (lower is better) Translates to: SLAAIWQKSPPP*FPKGHRDPSDT Trigger: GGTATCAGAGGGGTCCCTGTGCCCTTTGGGGAATCAGGGAGGAGGTGACTTCTGCCATATAGCAGCCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CCA 72 bp | AGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTaGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGA | + |
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Preference number: 3 (lower is better) Translates to: STELWLWSVGSV*ASVASPFFWHR Trigger: TCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| 3UTR GCA 72 bp | GAGCCTCTTGCCCAGGGGTCGTTCAAGGGCCTAGGATaGCAGGAAGCTTCAGGATTAGAGACCACAGAATGT | + |
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Preference number: 3 (lower is better) Translates to: EPLAQGSFKGLG*QEASGLETTEC Trigger: ACATTCTGTGGTCTCTAATCCTGAAGCTTCCTGGCATCCTAGGCCCTTGAACGACCCCTGGGCAAGAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CCA 72 bp | CTGTCCCTCTGGGTACTCCTCATGATTCGCACTCTCTaGCTGCTATATGGCAGAAGTCACCTCCTCCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: LSLWVLLMIRTL*LLYGRSHLLPD Trigger: ATCAGGGAGGAGGTGACTTCTGCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGTACCCAGAGGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CCA 72 bp | AGAAACTTTGGAGTCCATAGCACAGAACTGTGGCTGTaGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCA | + |
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Preference number: 3 (lower is better) Translates to: RNFGVHSTELWL*SVGSVWASVAS Trigger: TGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTCCAAAGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| 3UTR TCA 72 bp | AATGGCAGGACCTCTAGACTCCTATACACAGGAACCTaGAACTCTACCCTGCCTCTCTCTAGAGCAGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: NGRTSRLLYTGT*NSTLPLSRAGA Trigger: TGCTCCTGCTCTAGAGAGAGGCAGGGTAGAGTTTCAGGTTCCTGTGTATAGGAGTCTAGAGGTCCTGCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CCA 72 bp | TTCATGAGAAACTTTGGAGTCCATAGCACAGAACTGTaGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTG | + |
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Preference number: 3 (lower is better) Translates to: FMRNFGVHSTEL*LWSVGSVWASV Trigger: CACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTCCAAAGTTTCTCATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| 3UTR CCA 72 bp | TGTTTGGTACATATGAGGGTGGACTGGGATCAGAGATaGAGCAGAGATGTTCGTCTCACATGTTCCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: CLVHMRVDWDQR*SRDVRLTCSPG Trigger: GCCAGGGGAACATGTGAGACGAACATCTCTGCTCCATCTCTGATCCCAGTCCACCCTCATATGTACCAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR-3UTR CAA 90 bp | GTACTCCTCATGATTCGCACTCTCTGGCTGCTATATGGCAGAAGTCACCTCCTCATTCATCTGCTGCCCTaGACCAAAGGCTCTTTGGAT | + |
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Preference number: 3 (lower is better) Translates to: VLLMIRTLWLLYGRSHLLIHLLP*TKGSLD Trigger: ATCCAAAGAGCCTTTGGTCAAGGGCAGCAGATGAAT...GAGGAGGTGACTTCTGCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CCA 72 bp | GAGATGTTCGTCTCACATGTTCCCCTGGCAACATTATaGCAGAAGGGAAGAATGCCACATTCTTCACCCACT | + |
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Preference number: 3 (lower is better) Translates to: EMFVSHVPLATL*QKGRMPHSSPT Trigger: AGTGGGTGAAGAATGTGGCATTCTTCCCTTCTGCCATAATGTTGCCAGGGGAACATGTGAGACGAACATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CCA 72 bp | GAGATGGAGCAGAGATGTTCGTCTCACATGTTCCCCTaGCAACATTATGGCAGAAGGGAAGAATGCCACATT | + |
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Preference number: 3 (lower is better) Translates to: EMEQRCSSHMFP*QHYGRREECHI Trigger: AATGTGGCATTCTTCCCTTCTGCCATAATGTTGCCAGGGGAACATGTGAGACGAACATCTCTGCTCCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR CCA 72 bp | AAGTTGGATAAGTCTGGGAACCCTCTGGGTCTGAGATaGGTCTTCTTTATCTCCAGAGCTTCCCTTAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: KLDKSGNPLGLR*VFFISRASLKD Trigger: GTCCTTAAGGGAAGCTCTGGAGATAAAGAAGACCCATCTCAGACCCAGAGGGTTCCCAGACTTATCCAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| 3UTR TCA 72 bp | GATAGAAGTTGGATAAGTCTGGGAACCCTCTGGGTCTaGGATGGGTCTTCTTTATCTCCAGAGCTTCCCTTA | + |
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Preference number: 3 (lower is better) Translates to: DRSWISLGTLWV*DGSSLSPELPL Trigger: TAAGGGAAGCTCTGGAGATAAAGAAGACCCATCTCAGACCCAGAGGGTTCCCAGACTTATCCAACTTCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR TCA 90 bp | GTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTGGGTGGTGACCACCACTaGGAGACTGCTGCTGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: VWASVASPFFWHRGHAWLGGDHH*ETAAVE Trigger: CTCGACAGCAGCAGTCTCTCAGTGGTGGTCACCACC...CAACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS-3UTR GCA 90 bp | TGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGTGGCAAGGGCCGGGGTaGCAGCAGTTGACAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: WLWSVGSVWASVASPFFWWQGPG*QQLTGS Trigger: GGATCCTGTCAACTGCTGGCACCCCGGCCCTTGCCA...CCAGAAGAACGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS-3UTR GCA 90 bp | CATCCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTCTGGCAAGGGCCGGGGTaGCAGCAGTTGACAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: HPSATLISQRGGASCPGVWQGPG*QQLTGS Trigger: GGATCCTGTCAACTGCTGGCACCCCGGCCCTTGCCA...GACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR GCA 90 bp | GGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTGCAGCTTTCTCTCTGGCGTTGTaGTCAGTGAGGTCCTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: GLGGITVLLAQRPCLVAAFSLAL*SVRSLG Trigger: CCCTAAGGACCTCACTGAGCACAACGCCAGAGAGAA...AGCTGCAACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS-3UTR CCA 90 bp | CTGACGTCAACGCCTCGGTCAGTGCTGGGCTCCCAGTGGGAAGTGGATCTTGAAAGGCAACCAACCCCTTaGCTGGAGTTGCACTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: LTSTPRSVLGSQWEVDLERQPTP*LELHCR Trigger: CCGACAGTGCAACTCCAGCCAAGGGGTTGGTTGCCT...TTCAAGATCCACTTCCCACTGGGAGCCCAGCACTGACCGAGGCGTTGACGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR TCA 90 bp | CGTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTGGAAGTGGTCAGAGATaGTGGTTCAGGGGAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RLGLGGITVLLAQRPCLVGSGQR*WFRGSG Trigger: ACCACTTCCCCTGAACCATCATCTCTGACCACTTCC...AACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS-3UTR TCA 90 bp | AAAGAGGGGGAGCCTCTTGCCCAGGGGTCGTTCAAGGGCCTAGGATGCCAGGAAGGAAGAGCTGCTCTCTaGAGACAGGTACTCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: KEGEPLAQGSFKGLGCQEGRAAL*RQVLHF Trigger: GAAGTGGAGTACCTGTCTTCAGAGAGCAGCTCTTCC...TTCCTGGCATCCTAGGCCCTTGAACGACCCCTGGGCAAGAGGCTCCCCCTCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR CCA 90 bp | GAGTCCATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGGGACATGTGGACAAGTaGCATGCGGGCGTGCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: ESIAQNCGCGLLVAFGPRGHVDK*HAGVQF Trigger: GAACTGCACGCCCGCATGCCACTTGTCCACATGTCC...CCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS-3UTR TCA 90 bp | CCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTCGTTCTGGGCCTGTCCCTTTaGGTGAAGGTGGACACTTCC | + |
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Preference number: 4 (lower is better) Translates to: PSATLISQRGGASCPGVVLGLSL*VKVDTS Trigger: GGAAGTGTCCACCTTCACTCAAAGGGACAGGCCCAG...AACGACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR TCA 90 bp | CCCAGTGGGAAGTGGATCTTGAAAGGGTCTCCCAGGGACCTTGCAGTAGCTTACTGCTGTCGAGAGCCGTaGAACTCACGAAGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PSGKWILKGSPRDLAVAYCCREP*NSRRRL Trigger: CAGCCTCCTTCGTGAGTTTCACGGCTCTCGACAGCA...GTAAGCTACTGCAAGGTCCCTGGGAGACCCTTTCAAGATCCACTTCCCACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR TCA 90 bp | TCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTCGTTCAAGGTGGTGACCACCACTaGGAGACTGCTGCTGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: SATLISQRGGASCPGVVQGGDHH*ETAAVE Trigger: CTCGACAGCAGCAGTCTCTCAGTGGTGGTCACCACC...TTGAACGACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR CCA 90 bp | GTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTGATCAGGTTGGTGGTCTaGAAAGCTCTCTCTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VWASVASPFFWHRGHAWLIRLVV*KALSEL Trigger: CAGCTCAGAGAGAGCTTTCCAGACCACCAACCTGAT...CAACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS-3UTR TCA 90 bp | GGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGAGAAGTGATCAGAGATaGTGGTGCAGGGGAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GLLVAFGPRWHHRSSGTERSDQR*WCRGSG Trigger: ACCACTTCCCCTGCACCATCATCTCTGATCACTTCT...CTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS-3UTR TCA 90 bp | GGGCTCTCGAGCCAGCTGGCCTTCATGAGAAACTTTGGAGTCCATAGCACAGAAGAGGGTGGCTCTCTGTaGGGAAGGAGCTGTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLSSQLAFMRNFGVHSTEEGGSL*GRSCWL Trigger: CAACCAACAGCTCCTTCCTCACAGAGAGCCACCCTC...TTCTGTGCTATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | GGTCAGCCCCTCCCCTTGCACATACACTCAGGCATAAGTGGACCAAGGTCTTGTTGCCAGTTTGGACAGTaGTCATCCCAGTTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQPLPLHIHSGISGPRSCCQFGQ*SSQFWG Trigger: GCCCCAGAACTGGGATGAGCACTGTCCAAACTGGCA...ACAAGACCTTGGTCCACTTATGCCTGAGTGTATGTGCAAGGGGAGGGGCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | GTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTGTTCGCTTTCTGTGATTaGACTAGTGGAGACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VWASVASPFFWHRGHAWLFAFCD*TSGDCP Trigger: GGGACAGTCTCCACTAGTGCAATCACAGAAAGCGAA...CAACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGCCCCTCCCCTTGCACATACACTCAGGCATAAGTGGACCAAGGTCTTGTGCTCATCCCAGTTCTaGGGCTGTTGCTTGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSAPPLAHTLRHKWTKVLCSSQF*GCCLVP Trigger: TGGCACCAAGCAACAGCCCCAGAACTGGGATGAGCA...CAAGACCTTGGTCCACTTATGCCTGAGTGTATGTGCAAGGGGAGGGGCTGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGTGGGAAGTGGATCTTGAAAGGGTCTCCCAGGGACCTTGCAGTAGCTTACTGCTCATCCCAGTTCTaGGGCTGTTGCTTGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGKWILKGSPRDLAVAYCSSQF*GCCLVP Trigger: TGGCACCAAGCAACAGCCCCAGAACTGGGATGAGCA...GTAAGCTACTGCAAGGTCCCTGGGAGACCCTTTCAAGATCCACTTCCCACTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTCGAGCCAGCTGGCCTTCATGAGAAACTTTGGAGTCCATAGCACAGAAAGGCAACCAACCCCTTaGCTGGAGTTGCACTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GLSSQLAFMRNFGVHSTERQPTP*LELHCR Trigger: CCGACAGTGCAACTCCAGCCAAGGGGTTGGTTGCCT...TTCTGTGCTATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | AGAAACTTTGGAGTCCATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTGCTGAGGCTCGCGCCTaGGGCCCCAGAGATGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RNFGVHSTELWLWSVGSVAEARA*GPRDGD Trigger: ATCACCATCTCTGGGGCCCCAGGCGCGAGCCTCAGC...AACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTCCAAAGTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | TTCGTCTCACATGTTCCCCTGGCAACATTATGGCAGAAGGGAAGAATGCCACATGCTGAGGCTCGCGCCTaGGGCCCCAGAGATGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FVSHVPLATLWQKGRMPHAEARA*GPRDGD Trigger: ATCACCATCTCTGGGGCCCCAGGCGCGAGCCTCAGC...ATGTGGCATTCTTCCCTTCTGCCATAATGTTGCCAGGGGAACATGTGAGACGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | AATAACCAGGCAGAGGATGTGAGGGACATCTCTGAAAAGAGGTCAGCCCCTCCCCTCAGGAAGGACATGTaGACAAGTGGCATGCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NNQAEDVRDISEKRSAPPLRKDM*TSGMRA Trigger: CGCCCGCATGCCACTTGTCCACATGTCCTTCCTGAG...GGGAGGGGCTGACCTCTTTTCAGAGATGTCCCTCACATCCTCTGCCTGGTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| 3UTR CAA 72 bp | TTGGAGTCCATAGCACAGAACTGTGGCTGTGGTCTGTaGGTAGCGTTTGGGCCTCGGTGGCATCACCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LESIAQNCGCGL*VAFGPRWHHRS Trigger: AGAACGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR TCA 90 bp | TGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGTCTAGAGGTACATACTaGATCAGGTTGGTGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLWSVGSVWASVASPFFWSRGTY*IRLVVW Trigger: CCAGACCACCAACCTGATTCAGTATGTACCTCTAGA...CCAGAAGAACGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCGAGCCAGCTGGCCTTCATGAGAAACTTTGGAGTCCATAGCACAGAACTGTGCTGTCGAGAGCCGTaGAACTCACGAAGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSQLAFMRNFGVHSTELCCREP*NSRRRL Trigger: CAGCCTCCTTCGTGAGTTTCACGGCTCTCGACAGCA...CAGTTCTGTGCTATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | AGCACAGCCCTCGAGCAAGTCCATTCATCACTGGAAGGTCACCTCCCACTTCAATGCCAGTTTGGACAGTaGTCATCCCAGTTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: STALEQVHSSLEGHLPLQCQFGQ*SSQFWG Trigger: GCCCCAGAACTGGGATGAGCACTGTCCAAACTGGCA...TTGAAGTGGGAGGTGACCTTCCAGTGATGAATGGACTTGCTCGAGGGCTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGTGGGAAGTGGATCTTGAAAGGGTCTCCCAGGGACCTTGCAGTAGCTTACTGGAGTCCCACACTGTaGCAGTTTGGACAGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGKWILKGSPRDLAVAYWSPTL*QFGQCS Trigger: TGAGCACTGTCCAAACTGGCACAGTGTGGGACTCCA...GTAAGCTACTGCAAGGTCCCTGGGAGACCCTTTCAAGATCCACTTCCCACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTGTATCCAAGCAGTGGATaGAGATGTTGTAGGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VWASVASPFFWHRGHAWLYPSSG*RCCRMR Trigger: ACGCATCCTACAACATCTGCATCCACTGCTTGGATA...CAACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGTTTGTGTTTGGTACATATGAGGGTGGACTGGGATCAGAGATGGAGCAGATGGAGGCCTTCCTCCTaGAGGCTCGGCAGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSLCLVHMRVDWDQRWSRWRPSS*RLGRRG Trigger: GCCTCTCCTGCCGAGCCTGCAGGAGGAAGGCCTCCA...TCTGCTCCATCTCTGATCCCAGTCCACCCTCATATGTACCAAACACAAACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | CGTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTATGATACAGGAAAAATaGTCTGAGCATCCAGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: RLGLGGITVLLAQRPCLVMIQEK*SEHPGT Trigger: CGTCCCTGGATGCTCAGACCATTTTTCCTGTATCAT...AACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | CGTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTCCGTTACAGTGGAAATaGTTTGGGTCTTTAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLGLGGITVLLAQRPCLVPLQWK*FGSLGS Trigger: TGACCCTAAAGACCCAAACCATTTCCACTGTAACGG...AACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | ACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCACCGATAGAAAAAGGAGGGTaGCTCTCTGTGAGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TELWLWSVGSVWASVASPIEKGG*LSVRKE Trigger: CTCCTTCCTCACAGAGAGCCACCCTCCTTTTTCTAT...CGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR TCA 90 bp | AACTTTGGAGTCCATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGCTGGGCCTGTCCCTTTaGGTGAAGGTGGACACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NFGVHSTELWLWSVGSVWLGLSL*VKVDTS Trigger: GGAAGTGTCCACCTTCACTCAAAGGGACAGGCCCAG...CCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTCCAAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR TCA 90 bp | CGTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTTTAATATCTCAGAAGTaGACAAAGCTGCCGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLGLGGITVLLAQRPCLVLISQK*TKLPSL Trigger: AAGCGACGGCAGCTTTGTTCACTTCTGAGATATTAA...AACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTAGCGTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCTCAATAGAGAGTGTTaGAGTGTTTTCCAGGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVAFGPRWHHRSSGTEAMLNREC*SVFQGV Trigger: AACCCCCTGGAAAACACTTCAACACTCTCTATTGAG...CATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAACGCTACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | ACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCACCGAACTGTGATCTTCCTTaGCTCTTCAGAGCTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TELWLWSVGSVWASVASPNCDLP*LFRAVI Trigger: GATGACAGCTCTGAAGAGGCAAGGAAGATCACAGTT...CGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCGAGCAAGTCCATTCATCACTGGAAGGTCACCTCCCACTTCAAGTACCGTTTCTCTCTGGCGTTGTaGTCAGTGAGGTCCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSKSIHHWKVTSHFKYRFSLAL*SVRSLG Trigger: CCCTAAGGACCTCACTGAGCACAACGCCAGAGAGAA...ACGGTACTTGAAGTGGGAGGTGACCTTCCAGTGATGAATGGACTTGCTCGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | CTGACGTCAACGCCTCGGTCAGTGCTGGGCTCCCAGTGGGAAGTGGATCTTGAAATGATACAGGAAAAATaGTCTGAGCATCCAGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LTSTPRSVLGSQWEVDLEMIQEK*SEHPGT Trigger: CGTCCCTGGATGCTCAGACCATTTTTCCTGTATCAT...TTCAAGATCCACTTCCCACTGGGAGCCCAGCACTGACCGAGGCGTTGACGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGATAGGTGAGATGGTCTaGGTATCTAGGGATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: WLWSVGSVWASVASPFFWIGEMV*VSRDDG Trigger: ACCATCATCCCTAGATACCCAGACCATCTCACCTAT...CCAGAAGAACGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR TCA 90 bp | ACATCCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTAGAAGTGATCAGAGATaGTGGTGCAGGGGAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSFSYLNFPKRGSLLPRGRSDQR*WCRGSG Trigger: ACCACTTCCCCTGCACCATCATCTCTGATCACTTCT...ACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR TCA 90 bp | CTCGTCTATATCCCCATTAAGCAAAGTAGCCAGATTGGTGAATGGCAGGACCTCGAGGGTGGCTCTCTGTaGGGAAGGAGCTGTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVYIPIKQSSQIGEWQDLEGGSL*GRSCWL Trigger: CAACCAACAGCTCCTTCCTCACAGAGAGCCACCCTC...GAGGTCCTGCCATTCACCAATCTGGCTACTTTGCTTAATGGGGATATAGACGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCACCGGGTGCTAGCTGTAGTTaGATAGATAGAAAAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TELWLWSVGSVWASVASPGASCS*IDRKRR Trigger: CCTCCTTTTTCTATCTATTCAACTACAGCTAGCACC...CGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | GGTCAGCCCCTCCCCTTGCACATACACTCAGGCATAAGTGGACCAAGGTCTTGTTGTCAGAGGAAGAGCTaGTCTCTGAAGACAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GQPLPLHIHSGISGPRSCCQRKS*SLKTGT Trigger: AGTACCTGTCTTCAGAGAGCAGCTCTTCCTCTGACA...ACAAGACCTTGGTCCACTTATGCCTGAGTGTATGTGCAAGGGGAGGGGCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGTGGGAAGTGGATCTTGAAAGGGTCTCCCAGGGACCTTGCAGTAGCTTACTTCGCTTTCTGTGATTaGACTAGTGGAGACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSGKWILKGSPRDLAVAYFAFCD*TSGDCP Trigger: GGGACAGTCTCCACTAGTGCAATCACAGAAAGCGAA...GTAAGCTACTGCAAGGTCCCTGGGAGACCCTTTCAAGATCCACTTCCCACTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGCCCCTCCCCTTGCACATACACTCAGGCATAAGTGGACCAAGGTCTTGATGGTTCAGGGGAAGTaGTTTGGGTATCCAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RSAPPLAHTLRHKWTKVLMVQGK*FGYPGM Trigger: CATTCCTGGATACCCAAACCACTTCCCCTGAACCAT...CAAGACCTTGGTCCACTTATGCCTGAGTGTATGTGCAAGGGGAGGGGCTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGGGGGAGCCTCTTGCCCAGGGGTCGTTCAAGGGCCTAGGATGCCAGGAAACAGTGGAAATGGTTTaGGTCTTTAGGGTCAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KEGEPLAQGSFKGLGCQETVEMV*VFRVNS Trigger: TGAATTGACCCTAAAGACCCAAACCATTTCCACTGT...TTCCTGGCATCCTAGGCCCTTGAACGACCCCTGGGCAAGAGGCTCCCCCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACTTTGGAGTCCATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTGGAAGTGGTCAGAGATaGTGGTGCAGGGGAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RNFGVHSTELWLWSVGSVGSGQR*WCRGSG Trigger: ACCACTTCCCCTGCACCATCATCTCTGACCACTTCC...AACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTCCAAAGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR TCA 90 bp | CTGACGTCAACGCCTCGGTCAGTGCTGGGCTCCCAGTGGGAAGTGGATCTTGAATTGCTGAGTTTAATATaGGTGATGTTGAAGGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LTSTPRSVLGSQWEVDLELLSLI*VMLKAT Trigger: GGTTGCCTTCAACATCACTCATATTAAACTCAGCAA...TTCAAGATCCACTTCCCACTGGGAGCCCAGCACTGACCGAGGCGTTGACGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR TCA 90 bp | AACTTTGGAGTCCATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGTGCTTCTCCCATTGTTaGTCCAGCAACCATGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NFGVHSTELWLWSVGSVWCFSHC*SSNHGD Trigger: GTCCCCATGGTTGCTGGATCAACAATGGGAGAAGCA...CCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTCCAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | GAGCACAGCCCTCGAGCAAGTCCATTCATCACTGGAAGGTCACCTCCCACTTCATATCCAAGCAGTGGATaGAGATGTTGTAGGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EHSPRASPFITGRSPPTSYPSSG*RCCRMR Trigger: ACGCATCCTACAACATCTGCATCCACTGCTTGGATA...TGAAGTGGGAGGTGACCTTCCAGTGATGAATGGACTTGCTCGAGGGCTGTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTCGTTCAATCAGGGGAAGTGGTTTaGGTATCCAGGAATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SATLISQRGGASCPGVVQSGEVV*VSRNDG Trigger: ACCATCATTCCTGGATACCCAAACCACTTCCCCTGA...TTGAACGACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | ACATCCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTATGGTTCAGGGGAAGTaGTTTGGGTATCCAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: TSFSYLNFPKRGSLLPRGMVQGK*FGYPGM Trigger: CATTCCTGGATACCCAAACCACTTCCCCTGAACCAT...ACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCACCGTTCACAGTGGAAATGGTTTaGGTCTTTAGGGTCAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELWLWSVGSVWASVASPFTVEMV*VFRVNS Trigger: TGAATTGACCCTAAAGACCCAAACCATTTCCACTGT...GAACGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTCGAGCCAGCTGGCCTTCATGAGAAACTTTGGAGTCCATAGCACAGAACCCAAGACCTCAGTGTaGCTTTGTGTCTCAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLSSQLAFMRNFGVHSTEPKTSV*LCVSIE Trigger: CTCTATTGAGACACAAAGCCACACTGAGGTCTTGGG...TTCTGTGCTATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | ACATCCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTCCCAAGACCTCAGTGTaGCTTTGTGTCTCAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSFSYLNFPKRGSLLPRGPKTSV*LCVSIE Trigger: CTCTATTGAGACACAAAGCCACACTGAGGTCTTGGG...ACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | CTGACGTCAACGCCTCGGTCAGTGCTGGGCTCCCAGTGGGAAGTGGATCTTGAACTGGATCATGTTTTGTaGTTTTCCTTATCCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSTPRSVLGSQWEVDLELDHVL*FSLSKQ Trigger: CTGCTTGGATAAGGAAAACCACAAAACATGATCCAG...TTCAAGATCCACTTCCCACTGGGAGCCCAGCACTGACCGAGGCGTTGACGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR TCA 90 bp | GAGCACAGCCCTCGAGCAAGTCCATTCATCACTGGAAGGTCACCTCCCACTTCATTAATATCTCAGAAGTaGACAAAGCTGCCGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EHSPRASPFITGRSPPTSLISQK*TKLPSL Trigger: AAGCGACGGCAGCTTTGTTCACTTCTGAGATATTAA...TGAAGTGGGAGGTGACCTTCCAGTGATGAATGGACTTGCTCGAGGGCTGTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR TCA 90 bp | TTCGTCTCACATGTTCCCCTGGCAACATTATGGCAGAAGGGAAGAATGCCACATTGCTTCTCCCATTGTTaGTCCAGCAACCATGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FVSHVPLATLWQKGRMPHCFSHC*SSNHGD Trigger: GTCCCCATGGTTGCTGGATCAACAATGGGAGAAGCA...ATGTGGCATTCTTCCCTTCTGCCATAATGTTGCCAGGGGAACATGTGAGACGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGTGGGAAGTGGATCTTGAAAGGGTCTCCCAGGGACCTTGCAGTAGCTTACGGTGCTAGCTGTAGTTaGATAGATAGAAAAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGKWILKGSPRDLAVAYGASCS*IDRKRR Trigger: CCTCCTTTTTCTATCTATTCAACTACAGCTAGCACC...GTAAGCTACTGCAAGGTCCCTGGGAGACCCTTTCAAGATCCACTTCCCACTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGAGTCCATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTGGTCTTGGTTAAGGTaGTGTTTGGGTTTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FGVHSTELWLWSVGSVWAWSWLR*CLGFCW Trigger: CCAGCAAAAACCCAAACATCACCTTAACCAAGACCA...GGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR TCA 90 bp | AGCACAGCCCTCGAGCAAGTCCATTCATCACTGGAAGGTCACCTCCCACTTCAATGGTCTTGGTTAAGGTaGTGTTTGGGTTTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STALEQVHSSLEGHLPLQWSWLR*CLGFCW Trigger: CCAGCAAAAACCCAAACATCACCTTAACCAAGACCA...TTGAAGTGGGAGGTGACCTTCCAGTGATGAATGGACTTGCTCGAGGGCTGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTAAGGACCATCGTGCTCTCTCTCAGGGAGGATGAAAATGCCTCCGCCGCTTTGTTACAAAAGAGGTaGTCTGAGTGTCTCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLRTIVLSLREDENASAALLQKR*SECLWN Trigger: ATTCCAGAGACACTCAGACCACCTCTTTTGTAACAA...AGCGGCGGAGGCATTTTCATCCTCCCTGAGAGAGAGCACGATGGTCCTTAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | ACATCCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTATAGGTGAGATGGTCTaGGTATCTAGGGATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSFSYLNFPKRGSLLPRGIGEMV*VSRDDG Trigger: ACCATCATCCCTAGATACCCAGACCATCTCACCTAT...ACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR CCA 90 bp | CCCTCGAGCAAGTCCATTCATCACTGGAAGGTCACCTCCCACTTCAAGTACCGTCCGTTACAGTGGAAATaGTTTGGGTCTTTAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSSKSIHHWKVTSHFKYRPLQWK*FGSLGS Trigger: TGACCCTAAAGACCCAAACCATTTCCACTGTAACGG...ACGGTACTTGAAGTGGGAGGTGACCTTCCAGTGATGAATGGACTTGCTCGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR TCA 90 bp | TCTATATCCCCATTAAGCAAAGTAGCCAGATTGGTGAATGGCAGGACCTCTAGAGGAAGTGGTCAGAGATaGTGGTGCAGGGGAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SISPLSKVARLVNGRTSRGSGQR*WCRGSG Trigger: ACCACTTCCCCTGCACCATCATCTCTGACCACTTCC...TCTAGAGGTCCTGCCATTCACCAATCTGGCTACTTTGCTTAATGGGGATATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTCGAGCCAGCTGGCCTTCATGAGAAACTTTGGAGTCCATAGCACAGAAAGAAGGTATTCTTATTaGAACCGTTCTGGTCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSSQLAFMRNFGVHSTERRYSY*NRSGLR Trigger: ACGGAGACCAGAACGGTTTCAATAAGAATACCTTCT...TTCTGTGCTATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR TCA 90 bp | CTCGTCTATATCCCCATTAAGCAAAGTAGCCAGATTGGTGAATGGCAGGACCTCTCAGGAGGTCAACTGTaGTCTTCCTTGCCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVYIPIKQSSQIGEWQDLSGGQL*SSLPLQ Trigger: CTGAAGAGGCAAGGAAGATCACAGTTGACCTCCTGA...GAGGTCCTGCCATTCACCAATCTGGCTACTTTGCTTAATGGGGATATAGACGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR TCA 90 bp | AAATACAATAACCAGGCAGAGGATGTGAGGGACATCTCTGAAAAGAGGTCAGCCGGAAGAGCTGCTCTCTaGAGACAGGTACTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYNNQAEDVRDISEKRSAGRAAL*RQVLHF Trigger: GAAGTGGAGTACCTGTCTTCAGAGAGCAGCTCTTCC...GGCTGACCTCTTTTCAGAGATGTCCCTCACATCCTCTGCCTGGTTATTGTATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | TTTGGAGTCCATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCAGCTGTTGGTTGTATTaGCTGTGGTTAAAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FGVHSTELWLWSVGSVWASCWLY*LWLKSL Trigger: CAGAGACTTTAACCACAGGCAATACAACCAACAGCT...GGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | AGCACAGCCCTCGAGCAAGTCCATTCATCACTGGAAGGTCACCTCCCACTTCAAAGCTGTTGGTTGTATTaGCTGTGGTTAAAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STALEQVHSSLEGHLPLQSCWLY*LWLKSL Trigger: CAGAGACTTTAACCACAGGCAATACAACCAACAGCT...TTGAAGTGGGAGGTGACCTTCCAGTGATGAATGGACTTGCTCGAGGGCTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | ATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATTTGTTACAAAAGAGGTaGTCTGAGTGTCTCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IAQNCGCGLLVAFGPRWHLLQKR*SECLWN Trigger: ATTCCAGAGACACTCAGACCACCTCTTTTGTAACAA...ATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | AATAACCAGGCAGAGGATGTGAGGGACATCTCTGAAAAGAGGTCAGCCCCTCCCTGGTCTCCGTTACAGTaGAAATGGTTTGGGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NNQAEDVRDISEKRSAPPWSPLQ*KWFGSL Trigger: TAAAGACCCAAACCATTTCCACTGTAACGGAGACCA...GGGAGGGGCTGACCTCTTTTCAGAGATGTCCCTCACATCCTCTGCCTGGTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCATGATTCGCACTCTCTGGCTGCTATATGGCAGAAGTCACCTCCTCCCTGGTCTCCGTTACAGTaGAAATGGTTTGGGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TPHDSHSLAAIWQKSPPPWSPLQ*KWFGSL Trigger: TAAAGACCCAAACCATTTCCACTGTAACGGAGACCA...GGGAGGAGGTGACTTCTGCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | ATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCTGGATCATGTTTTGTaGTTTTCCTTATCCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IAQNCGCGLLVAFGPRWHLDHVL*FSLSKQ Trigger: CTGCTTGGATAAGGAAAACCACAAAACATGATCCAG...ATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS-3UTR TCA 90 bp | GGGCTCTCGAGCCAGCTGGCCTTCATGAGAAACTTTGGAGTCCATAGCACAGAATTGCTGAGTTTAATATaGGTGATGTTGAAGGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GLSSQLAFMRNFGVHSTELLSLI*VMLKAT Trigger: GGTTGCCTTCAACATCACTCATATTAAACTCAGCAA...TTCTGTGCTATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR GCA 90 bp | TTACCGAAATACAATAACCAGGCAGAGGATGTGAGGGACATCTCTGAAAAGAGGTGGAGTCCCACACTGTaGCAGTTTGGACAGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPKYNNQAEDVRDISEKRWSPTL*QFGQCS Trigger: TGAGCACTGTCCAAACTGGCACAGTGTGGGACTCCA...CCTCTTTTCAGAGATGTCCCTCACATCCTCTGCCTGGTTATTGTATTTCGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS-3UTR GCA 90 bp | CTCGTCTATATCCCCATTAAGCAAAGTAGCCAGATTGGTGAATGGCAGGACCTCTGTCAGAGGAAGAGCTaGTCTCTGAAGACAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LVYIPIKQSSQIGEWQDLCQRKS*SLKTGT Trigger: AGTACCTGTCTTCAGAGAGCAGCTCTTCCTCTGACA...GAGGTCCTGCCATTCACCAATCTGGCTACTTTGCTTAATGGGGATATAGACGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCGAGCCAGCTGGCCTTCATGAGAAACTTTGGAGTCCATAGCACAGAACTGCAGGGACGATGCTATTaGGGAGGTAATCTGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: LSSQLAFMRNFGVHSTELQGRCY*GGNLNI Trigger: AATATTCAGATTACCTCCCCAATAGCATCGTCCCTG...CAGTTCTGTGCTATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CCA 90 bp | GTACTCCTCATGATTCGCACTCTCTGGCTGCTATATGGCAGAAGTCACCTCCTCTTGGTTTTGCCTCAGTaGGTGGAGGCAAAGTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: VLLMIRTLWLLYGRSHLLLVLPQ*VEAKLI Trigger: TATTAACTTTGCCTCCACCCACTGAGGCAAAACCAA...GAGGAGGTGACTTCTGCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CCA 90 bp | TTCGTCTCACATGTTCCCCTGGCAACATTATGGCAGAAGGGAAGAATGCCACATATAGAAAAAGGAGGGTaGCTCTCTGTGAGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FVSHVPLATLWQKGRMPHIEKGG*LSVRKE Trigger: CTCCTTCCTCACAGAGAGCCACCCTCCTTTTTCTAT...ATGTGGCATTCTTCCCTTCTGCCATAATGTTGCCAGGGGAACATGTGAGACGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR TCA 90 bp | GATGGGTCTTCTTTATCTCCAGAGCTTCCCTTAAGGACCATCGTGCTCTCTCTCAGAAGGTATTCTTATTaGAACCGTTCTGGTCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: DGSSLSPELPLRTIVLSLRRYSY*NRSGLR Trigger: ACGGAGACCAGAACGGTTTCAATAAGAATACCTTCT...GAGAGAGAGCACGATGGTCCTTAAGGGAAGCTCTGGAGATAAAGAAGACCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR TCA 90 bp | TTACCGAAATACAATAACCAGGCAGAGGATGTGAGGGACATCTCTGAAAAGAGGTCAGGAGGTCAACTGTaGTCTTCCTTGCCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPKYNNQAEDVRDISEKRSGGQL*SSLPLQ Trigger: CTGAAGAGGCAAGGAAGATCACAGTTGACCTCCTGA...CCTCTTTTCAGAGATGTCCCTCACATCCTCTGCCTGGTTATTGTATTTCGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS-3UTR TCA 90 bp | CTCGTCTATATCCCCATTAAGCAAAGTAGCCAGATTGGTGAATGGCAGGACCTCCTCAATAGAGAGTGTTaGAGTGTTTTCCAGGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVYIPIKQSSQIGEWQDLLNREC*SVFQGV Trigger: AACCCCCTGGAAAACACTTCAACACTCTCTATTGAG...GAGGTCCTGCCATTCACCAATCTGGCTACTTTGCTTAATGGGGATATAGACGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR CCA 90 bp | TCTATATCCCCATTAAGCAAAGTAGCCAGATTGGTGAATGGCAGGACCTCTAGAATCAGGTTGGTGGTCTaGAAAGCTCTCTCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SISPLSKVARLVNGRTSRIRLVV*KALSEL Trigger: CAGCTCAGAGAGAGCTTTCCAGACCACCAACCTGAT...TCTAGAGGTCCTGCCATTCACCAATCTGGCTACTTTGCTTAATGGGGATATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR CCA 90 bp | CTCGTCTATATCCCCATTAAGCAAAGTAGCCAGATTGGTGAATGGCAGGACCTCTCCCAGATAAGCTTGTaGTCTCGGGGAAAATTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVYIPIKQSSQIGEWQDLSQISL*SRGKLV Trigger: AACCAATTTTCCCCGAGACCACAAGCTTATCTGGGA...GAGGTCCTGCCATTCACCAATCTGGCTACTTTGCTTAATGGGGATATAGACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR TCA 90 bp | TCTATATCCCCATTAAGCAAAGTAGCCAGATTGGTGAATGGCAGGACCTCTAGATCTAGAGGTACATACTaGATCAGGTTGGTGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SISPLSKVARLVNGRTSRSRGTY*IRLVVW Trigger: CCAGACCACCAACCTGATTCAGTATGTACCTCTAGA...TCTAGAGGTCCTGCCATTCACCAATCTGGCTACTTTGCTTAATGGGGATATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR CCA 90 bp | TTACCGAAATACAATAACCAGGCAGAGGATGTGAGGGACATCTCTGAAAAGAGGTCAGGGGAAGTGGTTTaGGTATCCAGGAATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPKYNNQAEDVRDISEKRSGEVV*VSRNDG Trigger: ACCATCATTCCTGGATACCCAAACCACTTCCCCTGA...CCTCTTTTCAGAGATGTCCCTCACATCCTCTGCCTGGTTATTGTATTTCGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| 3UTR CAA 72 bp | ACCTCGTCTATATCCCCATTAAGCAAAGTAGCCAGATaGGTGAATGGCAGGACCTCTAGACTCCTATACACA | + |
|
Preference number: 4 (lower is better) Translates to: TSSISPLSKVAR*VNGRTSRLLYT Trigger: TGTGTATAGGAGTCTAGAGGTCCTGCCATTCACCAATCTGGCTACTTTGCTTAATGGGGATATAGACGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR CCA 90 bp | TTACCGAAATACAATAACCAGGCAGAGGATGTGAGGGACATCTCTGAAAAGAGGTCCCAGATAAGCTTGTaGTCTCGGGGAAAATTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPKYNNQAEDVRDISEKRSQISL*SRGKLV Trigger: AACCAATTTTCCCCGAGACCACAAGCTTATCTGGGA...CCTCTTTTCAGAGATGTCCCTCACATCCTCTGCCTGGTTATTGTATTTCGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| 3UTR CAA 72 bp | CAACGAATCAGGTCTGATGACATTCATCTGCTGCCCTaGACCAAAGGCTCTTTGGATATAACAGGTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: QRIRSDDIHLLP*TKGSLDITGDI Trigger: AATGTCACCTGTTATATCCAAAGAGCCTTTGGTCAAGGGCAGCAGATGAATGTCATCAGACCTGATTCGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR CCA 90 bp | TTACCGAAATACAATAACCAGGCAGAGGATGTGAGGGACATCTCTGAAAAGAGGTTGGTTTTGCCTCAGTaGGTGGAGGCAAAGTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LPKYNNQAEDVRDISEKRLVLPQ*VEAKLI Trigger: TATTAACTTTGCCTCCACCCACTGAGGCAAAACCAA...CCTCTTTTCAGAGATGTCCCTCACATCCTCTGCCTGGTTATTGTATTTCGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS TCA 90 bp | CCTTGGCTGGAGTTGCACTGTCGGGTCCCAGGACTCGTGAGCTGCTaGGGACCCCAGCTGAACTGTCAGAGGAAGAGCTGCTCTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PWLELHCRVPGLVSC*GPQLNCQRKSCSLK Trigger: CTTCAGAGAGCAGCTCTTCCTCTGACAGTTCAGCTGGGGTCCTCAGCAGCTCACGAGTCCTGGGACCCGACAGTGCAACTCCAGCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS GCA 90 bp | TGCAGTTCACGGCGGAGCTGGTTCATCAGCTTCTCTCTGGCGTTGTaGTCAGTGAGGTCCTTAGGGGAGGCCACGGTCAGCCGTACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSSRRSWFISFSLAL*SVRSLGEATVSRTR Trigger: CCTTGTACGGCTGACCGTGGCCTCCCCTAAGGACCTCACTGAGCACAACGCCAGAGAGAAGCTGATGAACCAGCTCCGCCGTGAACTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CAA 90 bp | CGTTTGGGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTGCTGGGCCTGTCCCTTaGAGTGAAGGTGGACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLGLGGITVLLAQRPCLVAGPVP*SEGGHF Trigger: GAAGTGTCCACCTTCACTCAAAGGGACAGGCCCAGC...AACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCCCAAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CAA 90 bp | GGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTGCAGCTCCACACTGTGCCAGTTaGGACAGTGCTCATCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLGGITVLLAQRPCLVAAPHCAS*DSAHPS Trigger: ACTGGGATGAGCACTGTCCAAACTGGCACAGTGTGG...AGCTGCAACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CAA 90 bp | GGCCTCGGTGGCATCACCGTTCTTCTGGCACAGAGGCCATGCCTGGTTGCAGCTCGGGGAAAATTGGTTTaGCCTCAGTGGGTGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLGGITVLLAQRPCLVAARGKLV*PQWVEA Trigger: TGCCTCCACCCACTGAGGCAAAACCAATTTTCCCCG...AGCTGCAACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCACCGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CAA 90 bp | ATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATGATGCGTCGGGGGCTTaGGTGAGGCTGTGGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: IAQNCGCGLLVAFGPRWHDASGA*VRLWSW Trigger: CCAAGACCACAGCCTCACCAAAGCCCCCGACGCATC...ATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CAA 90 bp | CTGACGTCAACGCCTCGGTCAGTGCTGGGCTCCCAGTGGGAAGTGGATCTTGAACCAGTTCTGGGGCTGTaGCTTGGTGCCAATGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTSTPRSVLGSQWEVDLEPVLGL*LGANVS Trigger: AGAGACATTGGCACCAAGCAACAGCCCCAGAACTGG...TTCAAGATCCACTTCCCACTGGGAGCCCAGCACTGACCGAGGCGTTGACGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCTCATGATTCGCACTCTCTGGCTGCTATATGGCAGAAGTCACCTCCTCCCGATGCGTCGGGGGCTTaGGTGAGGCTGTGGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TPHDSHSLAAIWQKSPPPDASGA*VRLWSW Trigger: CCAAGACCACAGCCTCACCAAAGCCCCCGACGCATC...GGGAGGAGGTGACTTCTGCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS GCA 90 bp | AACAGAGGTAAGAGTCTGGGCCACTGCTGTTTCGCTTTCTGTGATTaGACTAGTGGAGACTGTCCCCTCAAGGGTGGTGGCAAGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: NRGKSLGHCCFAFCD*TSGDCPLKGGGKGR Trigger: CCGGCCCTTGCCACCACCCTTGAGGGGACAGTCTCCACTAGTGCAATCACAGAAAGCGAAACAGCAGTGGCCCAGACTCTTACCTCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTCGTTGCTGGGCCTGTCCCTTaGAGTGAAGGTGGACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSATLISQRGGASCPGVVAGPVP*SEGGHF Trigger: GAAGTGTCCACCTTCACTCAAAGGGACAGGCCCAGC...AACGACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS TCA 90 bp | GTCGAGAGCCGTGAAACTCACGAAGGAGGCTGCTTCTCCCATTGTTaGTCCAGCAACCATGGGGACTGTGATGGTGCCCAAGACCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VESRETHEGGCFSHC*SSNHGDCDGAQDLS Trigger: ACTGAGGTCTTGGGCACCATCACAGTCCCCATGGTTGCTGGATCAACAATGGGAGAAGCAGCCTCCTTCGTGAGTTTCACGGCTCTCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS-3UTR CAA 90 bp | GAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCACCGTTCGTGAGGAAGGAGCTGTaGGTTGTATTGCCTGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ELWLWSVGSVWASVASPFVRKEL*VVLPVV Trigger: AACCACAGGCAATACAACCAACAGCTCCTTCCTCAC...GAACGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS TCA 90 bp | CTTCTTCCCCATCTCGAGGGCAGATGTCCAGGACCAGATGGCTCGTaGGTCACTATCTGGTTCATCAGCTTCTCTCTGGCGTTGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLPHLEGRCPGPDGS*VTIWFISFSLALCS Trigger: TGAGCACAACGCCAGAGAGAAGCTGATGAACCAGATAGTGACTCACGAGCCATCTGGTCCTGGACATCTGCCCTCGAGATGGGGAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS GCA 90 bp | GCCAGTTTGGACAGTGCTCATCCCAGTTCTGGGGCTGTTGCTTGGTaGCAATGTCTCTGTAGGGATGGTGTGCATAACCGTGAGGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASLDSAHPSSGAVAW*QCLCRDGVHNREVR Trigger: TCTGACCTCACGGTTATGCACACCATCCCTACAGAGACATTGGCACCAAGCAACAGCCCCAGAACTGGGATGAGCACTGTCCAAACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS GCA 90 bp | CAAAGACGGCTTCTATGGAGTCCCACACTGTGCCAGTTTGGACAGTaGTCATCCCAGTTCTGGGGCTGTTGCTTGGTGCCAATGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRRLLWSPTLCQFGQ*SSQFWGCCLVPMSL Trigger: CAGAGACATTGGCACCAAGCAACAGCCCCAGAACTGGGATGAGCACTGTCCAAACTGGCACAGTGTGGGACTCCATAGAAGCCGTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS CCA 90 bp | GGTGCAGGGGAAGTGGTCAGAGATGATGGTTCAGGGGAAGTGGTTTaGGTATCCAGGAATGATGGTGCAGGAGAAGTGGTCTGGGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: GAGEVVRDDGSGEVV*VSRNDGAGEVVWVL Trigger: GAGTACCCAGACCACTTCTCCTGCACCATCATTCCTGGATACCCAAACCACTTCCCCTGAACCATCATCTCTGACCACTTCCCCTGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS CCA 90 bp | AGGGTGTCAAAGACGGCTTCTATGGAGTCCCACACTGTGCCAGTTTaGACAGTGCTCATCCCAGTTCTGGGGCTGTTGCTTGGTGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RVSKTASMESHTVPV*TVLIPVLGLLLGAN Trigger: ATTGGCACCAAGCAACAGCCCCAGAACTGGGATGAGCACTGTCCAAACTGGCACAGTGTGGGACTCCATAGAAGCCGTCTTTGACACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS CCA 90 bp | ATGATGGTGCAGGGGAAGTGGTCAGAGATGATGGTTCAGGGGAAGTaGTTTGGGTATCCAGGAATGATGGTGCAGGAGAAGTGGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MMVQGKWSEMMVQGK*FGYPGMMVQEKWSG Trigger: CCCAGACCACTTCTCCTGCACCATCATTCCTGGATACCCAAACCACTTCCCCTGAACCATCATCTCTGACCACTTCCCCTGCACCATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGTGGCATCACCGCTTCCATGTTGTTGGTaGTCACCAAAGGAACTGATC | + |
|
Preference number: 5 (lower is better) Translates to: TELWLWSVGSVWASVASPLPCCW*SPKELI Trigger: GATCAGTTCCTTTGGTGACAACCAACAACATGGAAG...CGGTGATGCCACCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CAA 90 bp | CTCTCGAGCCAGCTGGCCTTCATGAGAAACTTTGGAGTCCATAGCACAGAACTGCCAGTTCTGGGGCTGTaGCTTGGTGCCAATGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSQLAFMRNFGVHSTELPVLGL*LGANVS Trigger: AGAGACATTGGCACCAAGCAACAGCCCCAGAACTGG...CAGTTCTGTGCTATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CAA 90 bp | GTACTCCTCATGATTCGCACTCTCTGGCTGCTATATGGCAGAAGTCACCTCCTCCCACACTGTGCCAGTTaGGACAGTGCTCATCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VLLMIRTLWLLYGRSHLLPHCAS*DSAHPS Trigger: ACTGGGATGAGCACTGTCCAAACTGGCACAGTGTGG...GAGGAGGTGACTTCTGCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCCATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGGACCTCAGTGTGGCTTaGTGTCTCAATAGAGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ESIAQNCGCGLLVAFGPRDLSVA*CLNREC Trigger: ACACTCTCTATTGAGACACAAAGCCACACTGAGGTC...CCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CAA 90 bp | GGGCTCTCGAGCCAGCTGGCCTTCATGAGAAACTTTGGAGTCCATAGCACAGAAGGTGAGGCTGTGGTCTaGGTTAAGGTGATGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLSSQLAFMRNFGVHSTEGEAVV*VKVMFG Trigger: CCCAAACATCACCTTAACCAAGACCACAGCCTCACC...TTCTGTGCTATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS TCA 90 bp | TGGTGGTCTGGAAAGCTCTCTCTGAGCTGGGCCTGTCCCTTTGAGTaGAGGTGGACACTTCCATGTTGTTGGTTGTCACCAAAGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: WWSGKLSLSWACPFE*RWTLPCCWLSPKEL Trigger: CAGTTCCTTTGGTGACAACCAACAACATGGAAGTGTCCACCTTCACTCAAAGGGACAGGCCCAGCTCAGAGAGAGCTTTCCAGACCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS TCA 90 bp | AGGTTGGTGGTCTGGAAAGCTCTCTCTGAGCTGGGCCTGTCCCTTTaGGTGAAGGTGGACACTTCCATGTTGTTGGTTGTCACCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLVVWKALSELGLSL*VKVDTSMLLVVTKG Trigger: TCCTTTGGTGACAACCAACAACATGGAAGTGTCCACCTTCACTCAAAGGGACAGGCCCAGCTCAGAGAGAGCTTTCCAGACCACCAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS CCA 90 bp | GATCCAGCAACCATGGGGACTGTGATGGTGCCCAAGACCTCAGTGTaGCTTTGTGTCTCAATAGAGAGTGTTGAAGTGTTTTCCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DPATMGTVMVPKTSV*LCVSIESVEVFSRG Trigger: CCCCCTGGAAAACACTTCAACACTCTCTATTGAGACACAAAGCCACACTGAGGTCTTGGGCACCATCACAGTCCCCATGGTTGCTGGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS CCA 90 bp | GGAGGCCACGGTCAGCCGTACAAGGAGGAAGCCTCCATCTTCACCTaGATCATGTTTTGTGGTTTTCCTTATCCAAGCAGTGGATGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GGHGQPYKEEASIFT*IMFCGFPYPSSGCR Trigger: TCTGCATCCACTGCTTGGATAAGGAAAACCACAAAACATGATCCAGGTGAAGATGGAGGCTTCCTCCTTGTACGGCTGACCGTGGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCCATAGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGGCCTCGGGACACTTCCATGTTGTaGGTTGTCACCAAAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: ESIAQNCGCGLLVAFGPRDTSML*VVTKGT Trigger: AGTTCCTTTGGTGACAACCAACAACATGGAAGTGTC...CCGAGGCCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCTATGGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CAA 90 bp | CCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTCGTTGACACTTCCATGTTGTaGGTTGTCACCAAAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: PSATLISQRGGASCPGVVDTSML*VVTKGT Trigger: AGTTCCTTTGGTGACAACCAACAACATGGAAGTGTC...AACGACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTCTCGAGCCAGCTGGCCTTCATGAGAAACTTTGGAGTCCATAGCACAGAAGTGGACACTTCCATGTaGTTGGTTGTCACCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLSSQLAFMRNFGVHSTEVDTSM*LVVTKG Trigger: TCCTTTGGTGACAACCAACAACATGGAAGTGTCCAC...TTCTGTGCTATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS-3UTR CAA 90 bp | TTCGTCTCACATGTTCCCCTGGCAACATTATGGCAGAAGGGAAGAATGCCACATCGGGGAAAATTGGTTTaGCCTCAGTGGGTGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FVSHVPLATLWQKGRMPHRGKLV*PQWVEA Trigger: TGCCTCCACCCACTGAGGCAAAACCAATTTTCCCCG...ATGTGGCATTCTTCCCTTCTGCCATAATGTTGCCAGGGGAACATGTGAGACGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS-3UTR CAA 90 bp | GATGGGTCTTCTTTATCTCCAGAGCTTCCCTTAAGGACCATCGTGCTCTCTCTCGGTGAGGCTGTGGTCTaGGTTAAGGTGATGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DGSSLSPELPLRTIVLSLGEAVV*VKVMFG Trigger: CCCAAACATCACCTTAACCAAGACCACAGCCTCACC...GAGAGAGAGCACGATGGTCCTTAAGGGAAGCTCTGGAGATAAAGAAGACCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS TCA 90 bp | AGTGAAGGTGGACACTTCCATGTTGTTGGTTGTCACCAAAGGAACTaGTCTGCTAATGTCGAGACCTGGAGAGCTCACACTGACGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SEGGHFHVVGCHQRN*SANVETWRAHTDAN Trigger: GTTGGCGTCAGTGTGAGCTCTCCAGGTCTCGACATTAGCAGATCAGTTCCTTTGGTGACAACCAACAACATGGAAGTGTCCACCTTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS GCA 90 bp | TTTGTGGTTTTCCTTATCCAAGCAGTGGATGCAGATGTTGTAGGATaGGTCGGGGGCTTTGGTGAGGCTGTGGTCTTGGTTAAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FVVFLIQAVDADVVG*VGGFGEAVVLVKVM Trigger: CATCACCTTAACCAAGACCACAGCCTCACCAAAGCCCCCGACGCATCCTACAACATCTGCATCCACTGCTTGGATAAGGAAAACCACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS-3UTR CAA 90 bp | ACATCCTTCAGCTACCTTAATTTCCCAAAGAGGGGGAGCCTCTTGCCCAGGGGTGTGTCTTCCTGGTCTTaGTTACAAAAGAGGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSFSYLNFPKRGSLLPRGVSSWS*LQKRWS Trigger: AGACCACCTCTTTTGTAACAAAGACCAGGAAGACAC...ACCCCTGGGCAAGAGGCTCCCCCTCTTTGGGAAATTAAGGTAGCTGAAGGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS-3UTR CAA 90 bp | GTACTCCTCATGATTCGCACTCTCTGGCTGCTATATGGCAGAAGTCACCTCCTCGACCTCAGTGTGGCTTaGTGTCTCAATAGAGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLLMIRTLWLLYGRSHLLDLSVA*CLNREC Trigger: ACACTCTCTATTGAGACACAAAGCCACACTGAGGTC...GAGGAGGTGACTTCTGCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGTAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS GCA 90 bp | GTTCTGGGGCTGTTGCTTGGTGCCAATGTCTCTGTAGGGATGGTGTaGATAACCGTGAGGTCAGAAGGTATTCTTATTGAAACCGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLGLLLGANVSVGMV*ITVRSEGILIETVL Trigger: CAGAACGGTTTCAATAAGAATACCTTCTGACCTCACGGTTATGCACACCATCCCTACAGAGACATTGGCACCAAGCAACAGCCCCAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS-3UTR CAA 90 bp | GTACTCCTCATGATTCGCACTCTCTGGCTGCTATATGGCAGAAGTCACCTCCTCCTTCCATGTTGTTGGTaGTCACCAAAGGAACTGATC | + |
|
Preference number: 5 (lower is better) Translates to: VLLMIRTLWLLYGRSHLLLPCCW*SPKELI Trigger: GATCAGTTCCTTTGGTGACAACCAACAACATGGAAG...GAGGAGGTGACTTCTGCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS CCA 90 bp | GAAATGGTTTGGGTCTTTAGGGTCAATTCAATAGGTGAGATGGTCTaGGTATCTAGGGATGATGGTGCAGGGGAAGTGGTCAGAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: EMVWVFRVNSIGEMV*VSRDDGAGEVVRDD Trigger: ATCATCTCTGACCACTTCCCCTGCACCATCATCCCTAGATACCCAGACCATCTCACCTATTGAATTGACCCTAAAGACCCAAACCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS-3UTR CAA 90 bp | GATACCATGACCTCGTCTATATCCCCATTAAGCAAAGTAGCCAGATTGGTGAATGTGAGGAAGGAGCTGTaGGTTGTATTGCCTGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DTMTSSISPLSKVARLVNVRKEL*VVLPVV Trigger: AACCACAGGCAATACAACCAACAGCTCCTTCCTCAC...ATTCACCAATCTGGCTACTTTGCTTAATGGGGATATAGACGAGGTCATGGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
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| CDS TCA 90 bp | GTGATGGTTGTTTCTATTTCTGTGATGCAGTTGCTGAGTTTAATATaGGTGATGTTGAAGGCAACCAACCCCTTGGCTGGAGTTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VMVVSISVMQLLSLI*VMLKATNPLAGVAL Trigger: CAGTGCAACTCCAGCCAAGGGGTTGGTTGCCTTCAACATCACTCATATTAAACTCAGCAACTGCATCACAGAAATAGAAACAACCATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS-3UTR CAA 90 bp | TTACCGAAATACAATAACCAGGCAGAGGATGTGAGGGACATCTCTGAAAAGAGGGTGTCTTCCTGGTCTTaGTTACAAAAGAGGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPKYNNQAEDVRDISEKRVSSWS*LQKRWS Trigger: AGACCACCTCTTTTGTAACAAAGACCAGGAAGACAC...CCTCTTTTCAGAGATGTCCCTCACATCCTCTGCCTGGTTATTGTATTTCGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS TCA 90 bp | GTGGTAGTATGTGTCTTCCTGGTCTTTGTTACAAAAGAGGTGGTCTaGGTGTCTCTGGAATTGACCTCTGAACTGATACTAGTTGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: VVVCVFLVFVTKEVV*VSLELTSELILVAL Trigger: AAGTGCAACTAGTATCAGTTCAGAGGTCAATTCCAGAGACACTCAGACCACCTCTTTTGTAACAAAGACCAGGAAGACACATACTACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS GCA 72 bp | CGGCGGAGCTGGTTCATCAGCTTCTCTCTGGCGTTGTaGTCAGTGAGGTCCTTAGGGGAGGCCACGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRSWFISFSLAL*SVRSLGEATVS Trigger: GCTGACCGTGGCCTCCCCTAAGGACCTCACTGAGCACAACGCCAGAGAGAAGCTGATGAACCAGCTCCGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS CAA 72 bp | CCTCAAGGGTGGTGGCAAGGGCCGGGGTGCCAGCAGTaGACAGGATCCCAGATAAGCTTGTGGTCTCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PQGWWQGPGCQQ*TGSQISLWSRG Trigger: TCCCCGAGACCACAAGCTTATCTGGGATCCTGTCAACTGCTGGCACCCCGGCCCTTGCCACCACCCTTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS TCA 72 bp | GAGTTGCACTGTCGGGTCCCAGGACTCGTGAGCTGCTaGGGACCCCAGCTGAACTGTCAGAGGAAGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ELHCRVPGLVSC*GPQLNCQRKSC Trigger: GCAGCTCTTCCTCTGACAGTTCAGCTGGGGTCCTCAGCAGCTCACGAGTCCTGGGACCCGACAGTGCAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS CCA 72 bp | ACCCCTCCTGATGCTCAGGAAGGACATGTGGACAAGTaGCATGCGGGCGTGCAGTTCACGGCGGAGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TPPDAQEGHVDK*HAGVQFTAELV Trigger: AACCAGCTCCGCCGTGAACTGCACGCCCGCATGCCACTTGTCCACATGTCCTTCCTGAGCATCAGGAGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
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| CDS CCA 72 bp | AGCTGCCGTCGCTTCTGTAGGGCTGAGGCTCGCGCCTaGGGCCCCAGAGATGGTGATGGTTGTTTCTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: SCRRFCRAEARA*GPRDGDGCFYF Trigger: GAAATAGAAACAACCATCACCATCTCTGGGGCCCCAGGCGCGAGCCTCAGCCCTACAGAAGCGACGGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS GCA 72 bp | CTCAGGAAGGACATGTGGACAAGTGGCATGCGGGCGTaGAGTTCACGGCGGAGCTGGTTCATCAGCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LRKDMWTSGMRA*SSRRSWFISFS Trigger: AGAGAAGCTGATGAACCAGCTCCGCCGTGAACTGCACGCCCGCATGCCACTTGTCCACATGTCCTTCCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041123.9 |
||
| CDS GCA 72 bp | GGGTGTCAAAGACGGCTTCTATGGAGTCCCACACTGTaGCAGTTTGGACAGTGCTCATCCCAGTTCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GCQRRLLWSPTL*QFGQCSSQFWG Trigger: GCCCCAGAACTGGGATGAGCACTGTCCAAACTGGCACAGTGTGGGACTCCATAGAAGCCGTCTTTGACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS GCA 72 bp | GTCACTATCTGGTTCATCAGCTTCTCTCTGGCGTTGTaGTCAGTGAGGTCCTTAGGGGAGGCCACGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VTIWFISFSLAL*SVRSLGEATVS Trigger: GCTGACCGTGGCCTCCCCTAAGGACCTCACTGAGCACAACGCCAGAGAGAAGCTGATGAACCAGATAGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS TCA 72 bp | CATCTCGAGGGCAGATGTCCAGGACCAGATGGCTCGTaGGTCACTATCTGGTTCATCAGCTTCTCTCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: HLEGRCPGPDGS*VTIWFISFSLA Trigger: CGCCAGAGAGAAGCTGATGAACCAGATAGTGACTCACGAGCCATCTGGTCCTGGACATCTGCCCTCGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS GCA 72 bp | CTTCTATGGAGTCCCACACTGTGCCAGTTTGGACAGTaGTCATCCCAGTTCTGGGGCTGTTGCTTGGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLWSPTLCQFGQ*SSQFWGCCLVP Trigger: TGGCACCAAGCAACAGCCCCAGAACTGGGATGAGCACTGTCCAAACTGGCACAGTGTGGGACTCCATAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS CAA 72 bp | CCAGTTTGGACAGTGCTCATCCCAGTTCTGGGGCTGTaGCTTGGTGCCAATGTCTCTGTAGGGATGGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PVWTVLIPVLGL*LGANVSVGMVC Trigger: GCACACCATCCCTACAGAGACATTGGCACCAAGCAACAGCCCCAGAACTGGGATGAGCACTGTCCAAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS CAA 90 bp | AAGGGTGTCAAAGACGGCTTCTATGGAGTCCCACACTGTGCCAGTTaGGACAGTGCTCATCCCAGTTCTGGGGCTGTTGCTTGGTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: KGVKDGFYGVPHCAS*DSAHPSSGAVAWCQ Trigger: TTGGCACCAAGCAACAGCCCCAGAACTGGGATGAGCACTGTCCAAACTGGCACAGTGTGGGACTCCATAGAAGCCGTCTTTGACACCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS TCA 72 bp | CGTGAAACTCACGAAGGAGGCTGCTTCTCCCATTGTTaGTCCAGCAACCATGGGGACTGTGATGGTGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RETHEGGCFSHC*SSNHGDCDGAQ Trigger: TTGGGCACCATCACAGTCCCCATGGTTGCTGGATCAACAATGGGAGAAGCAGCCTCCTTCGTGAGTTTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS GCA 72 bp | GACAGTGCTCATCCCAGTTCTGGGGCTGTTGCTTGGTaGCAATGTCTCTGTAGGGATGGTGTGCATAACCGT | + |
|
Preference number: 6 (lower is better) Translates to: DSAHPSSGAVAW*QCLCRDGVHNR Trigger: ACGGTTATGCACACCATCCCTACAGAGACATTGGCACCAAGCAACAGCCCCAGAACTGGGATGAGCACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS CCA 72 bp | AAGACGGCTTCTATGGAGTCCCACACTGTGCCAGTTTaGACAGTGCTCATCCCAGTTCTGGGGCTGTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: KTASMESHTVPV*TVLIPVLGLLL Trigger: AAGCAACAGCCCCAGAACTGGGATGAGCACTGTCCAAACTGGCACAGTGTGGGACTCCATAGAAGCCGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS CCA 72 bp | TCTTCCCCATCTCGAGGGCAGATGTCCAGGACCAGATaGCTCGTGAGTCACTATCTGGTTCATCAGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSPSRGQMSRTR*LVSHYLVHQLL Trigger: GAGAAGCTGATGAACCAGATAGTGACTCACGAGCCATCTGGTCCTGGACATCTGCCCTCGAGATGGGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115116.8 |
||
| CDS CAA 72 bp | AAAGACGGCTTCTATGGAGTCCCACACTGTGCCAGTTaGGACAGTGCTCATCCCAGTTCTGGGGCTGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KDGFYGVPHCAS*DSAHPSSGAVA Trigger: AGCAACAGCCCCAGAACTGGGATGAGCACTGTCCAAACTGGCACAGTGTGGGACTCCATAGAAGCCGTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
||
| CDS TCA 72 bp | GGAAAGCTCTCTCTGAGCTGGGCCTGTCCCTTTGAGTaGAGGTGGACACTTCCATGTTGTTGGTTGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: GKLSLSWACPFE*RWTLPCCWLSP Trigger: TGGTGACAACCAACAACATGGAAGTGTCCACCTTCACTCAAAGGGACAGGCCCAGCTCAGAGAGAGCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS TCA 72 bp | GTCTGGAAAGCTCTCTCTGAGCTGGGCCTGTCCCTTTaGGTGAAGGTGGACACTTCCATGTTGTTGGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: VWKALSELGLSL*VKVDTSMLLVV Trigger: GACAACCAACAACATGGAAGTGTCCACCTTCACTCAAAGGGACAGGCCCAGCTCAGAGAGAGCTTTCCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS TCA 72 bp | CTTCTCCCATTGTTGATCCAGCAACCATGGGGACTGTaGTGGTGCCCAAGACCTCAGTGTGGCTTTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLPLLIQQPWGL*WCPRPQCGFVS Trigger: AGACACAAAGCCACACTGAGGTCTTGGGCACCATCACAGTCCCCATGGTTGCTGGATCAACAATGGGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS CCA 72 bp | TTTGCGTGTCTAGAGGTACATACTGAATCAGGTTGGTaGTCTGGAAAGCTCTCTCTGAGCTGGGCCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: FACLEVHTESGW*SGKLSLSWACP Trigger: GGGACAGGCCCAGCTCAGAGAGAGCTTTCCAGACCACCAACCTGATTCAGTATGTACCTCTAGACACGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS CCA 72 bp | TTGGACAGTGCTCATCCCAGTTCTGGGGCTGTTGCTTaGTGCCAATGTCTCTGTAGGGATGGTGTGCATAAC | + |
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Preference number: 6 (lower is better) Translates to: LDSAHPSSGAVA*CQCLCRDGVHN Trigger: GTTATGCACACCATCCCTACAGAGACATTGGCACCAAGCAACAGCCCCAGAACTGGGATGAGCACTGTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS CAA 72 bp | GGGTGGCTCTCTGTGAGGAAGGAGCTGTTGGTTGTATaGCCTGTGGTTAAAGTCTCTGAGGTAGCAGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: GWLSVRKELLVV*PVVKVSEVAEL Trigger: GAGCTCTGCTACCTCAGAGACTTTAACCACAGGCAATACAACCAACAGCTCCTTCCTCACAGAGAGCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS CCA 72 bp | GAGTTTGCGTGTCTAGAGGTACATACTGAATCAGGTTaGTGGTCTGGAAAGCTCTCTCTGAGCTGGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: EFACLEVHTESG*WSGKLSLSWAC Trigger: ACAGGCCCAGCTCAGAGAGAGCTTTCCAGACCACCAACCTGATTCAGTATGTACCTCTAGACACGCAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS CCA 72 bp | TGGTCTGGGTACTCAGGGATAATGATACAGGAAAAATaGTCTGAGCATCCAGGGACGATGCTATTGGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: WSGYSGIMIQEK*SEHPGTMLLGR Trigger: CCTCCCCAATAGCATCGTCCCTGGATGCTCAGACCATTTTTCCTGTATCATTATCCCTGAGTACCCAGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS TCA 72 bp | TCAGTGCTGAGAGTTTGCGTGTCTAGAGGTACATACTaGATCAGGTTGGTGGTCTGGAAAGCTCTCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SVLRVCVSRGTY*IRLVVWKALSE Trigger: CTCAGAGAGAGCTTTCCAGACCACCAACCTGATTCAGTATGTACCTCTAGACACGCAAACTCTCAGCACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS CCA 72 bp | ACCATGGGGACTGTGATGGTGCCCAAGACCTCAGTGTaGCTTTGTGTCTCAATAGAGAGTGTTGAAGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: TMGTVMVPKTSV*LCVSIESVEVF Trigger: AAACACTTCAACACTCTCTATTGAGACACAAAGCCACACTGAGGTCTTGGGCACCATCACAGTCCCCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS CAA 72 bp | GAAAAAGGAGGGTGGCTCTCTGTGAGGAAGGAGCTGTaGGTTGTATTGCCTGTGGTTAAAGTCTCTGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: EKGGWLSVRKEL*VVLPVVKVSEV Trigger: TACCTCAGAGACTTTAACCACAGGCAATACAACCAACAGCTCCTTCCTCACAGAGAGCCACCCTCCTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS CCA 72 bp | GGAGGAAGCCTCCATCTTCACCTGGATCATGTTTTGTaGTTTTCCTTATCCAAGCAGTGGATGCAGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: GGSLHLHLDHVL*FSLSKQWMQML Trigger: CAACATCTGCATCCACTGCTTGGATAAGGAAAACCACAAAACATGATCCAGGTGAAGATGGAGGCTTCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS TCA 72 bp | GGTGATGTTTGGGTTTTTGCTGGTGCTAGCTGTAGTTaGATAGATAGAAAAAGGAGGGTGGCTCTCTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GDVWVFAGASCS*IDRKRRVALCE Trigger: CTCACAGAGAGCCACCCTCCTTTTTCTATCTATTCAACTACAGCTAGCACCAGCAAAAACCCAAACATCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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| CDS GCA 72 bp | CTGTTGCTTGGTGCCAATGTCTCTGTAGGGATGGTGTaGATAACCGTGAGGTCAGAAGGTATTCTTATTGAA | + |
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Preference number: 6 (lower is better) Translates to: LLLGANVSVGMV*ITVRSEGILIE Trigger: TTCAATAAGAATACCTTCTGACCTCACGGTTATGCACACCATCCCTACAGAGACATTGGCACCAAGCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041123.9 ENSMUST00000115116.8 |
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