RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MUC16 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000109564

Ensembl transcript IDs: ENSMUST00000034653.7, ENSMUST00000207509.2, ENSMUST00000207857.2, ENSMUST00000208663.2

Found 428 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp ATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTGTGGCACCCAGCCAGTaGGAGGAGGCATTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: MWFIYSLNPAREEPSLEGVAPSQ*EEAFSV
Trigger: GACACTGAATGCCTCCTCCCACTGGCTGGGTGCCAC...ACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR TCA 90 bp ATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTACAGTGCCTCAAGAGTaGCCACTGTGGAGCCAGACG +
Preference number: 4 (lower is better)
Translates to: MWFIYSLNPAREEPSLEGTVPQE*PLWSQT
Trigger: CGTCTGGCTCCACAGTGGTCACTCTTGAGGCACTGT...ACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR TCA 90 bp CCAATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAAGGTTGGGATCCAGATaGGAGGAGAACAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PMWFIYSLNPAREEPSLERLGSR*EENSAS
Trigger: TGAGGCACTGTTCTCCTCTCATCTGGATCCCAACCT...TTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR TCA 90 bp CCAATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAATCTTCCTATCCAGTGTaGAGTTCAGCAACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: PMWFIYSLNPAREEPSLESSYPV*SSATGY
Trigger: GTACCCAGTTGCTGAACTTCACACTGGATAGGAAGA...TTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR GCA 90 bp ATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTAACTGGGTACCATTGTaGGTCATTCGAAGGAATTCC +
Preference number: 4 (lower is better)
Translates to: MWFIYSLNPAREEPSLEGNWVPL*VIRRNS
Trigger: GGAATTCCTTCGAATGACGCACAATGGTACCCAGTT...ACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR CCA 90 bp CCAATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGCTGAGAACTGGAACTaGTTGTTGGTATTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PMWFIYSLNPAREEPSLEAENWN*LLVFLL
Trigger: CAGCAGAAATACCAACAACCAGTTCCAGTTCTCAGC...TTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR CCA 90 bp TGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTAGACTTCTTTTGGTTTGCTaGTATTTGGTGGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: WFIYSLNPAREEPSLEGRLLLVC*YLVVLG
Trigger: GCCAAGCACCACCAAATACCAGCAAACCAAAAGAAG...TCTACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR CCA 90 bp CCAATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGAATCTACCCCTGTGTaGTTGTTGTTGTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: PMWFIYSLNPAREEPSLEESTPV*LLLLET
Trigger: TGTCTCCAACAACAACAACCACACAGGGGTAGATTC...TTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR TCA 90 bp CCAATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAATTCAGGTTGAAATGCTaGGAACTGGAACTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: PMWFIYSLNPAREEPSLEFRLKC*ELELVV
Trigger: AACAACCAGTTCCAGTTCTCAGCATTTCAACCTGAA...TTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR GCA 90 bp TGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTAGAGGTTGTTGGTATTTCTaGTGGCAGAAGAATGGATGT +
Preference number: 4 (lower is better)
Translates to: WFIYSLNPAREEPSLEGRGCWYF*WQKNGC
Trigger: ACATCCATTCTTCTGCCAGCAGAAATACCAACAACC...TCTACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR CCA 90 bp ATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTCTGCTGGCAGAAGAATaGATGTCTTCATGTCTATCA +
Preference number: 4 (lower is better)
Translates to: MWFIYSLNPAREEPSLEGLLAEE*MSSCLS
Trigger: TGATAGACATGAAGACATCCATTCTTCTGCCAGCAG...ACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR TCA 90 bp CCAATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAATCATCATCTCTGTTTTaGGAATACCCATCCACAAAG +
Preference number: 4 (lower is better)
Translates to: PMWFIYSLNPAREEPSLESSSLF*EYPSTK
Trigger: CTTTGTGGATGGGTATTCTCAAAACAGAGATGATGA...TTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR CCA 90 bp TGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTAGATGTTGGTATTTCTGCTaGCAGAAGAATGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: WFIYSLNPAREEPSLEGRCWYFC*QKNGCL
Trigger: AAGACATCCATTCTTCTGCCAGCAGAAATACCAACA...TCTACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR TCA 90 bp TGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTAGACTGTTTCTGAAAAGCTaGTTGAGCGCATTTTCAATA +
Preference number: 4 (lower is better)
Translates to: WFIYSLNPAREEPSLEGRLFLKS*LSAFSI
Trigger: TATTGAAAATGCGCTCAATCAGCTTTTCAGAAACAG...TCTACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR GCA 90 bp TGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTAGAATACTTCTTTTGGTTTaGTGGTATTTGGTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: WFIYSLNPAREEPSLEGRILLLV*WYLVVL
Trigger: AAGCACCACCAAATACCAGCAAACCAAAAGAAGTAT...TCTACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS TCA 90 bp GTGGCTACTCTACAGCCTGTGTATAGGGGGCCAAGACTGCTCCTCTaGAACAAAGGGCCGAGCAGGTGCTGCATGAGTGTATCTGTGATA +
Preference number: 5 (lower is better)
Translates to: VATLQPVYRGPRLLL*NKGPSRCCMSVSVI
Trigger: TATCACAGATACACTCATGCAGCACCTGCTCGGCCCTTTGTTTCAGAGGAGCAGTCTTGGCCCCCTATACACAGGCTGTAGAGTAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 90 bp GTGAAGGTTTCCGGCTTGTGCCACATAACTGTGTTGGACTCTGGCTaGAAAGATGTTGTTGGGGAGGGCAAGATAGTGGTGGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: VKVSGLCHITVLDSG*KDVVGEGKIVVAGS
Trigger: AGAGCCAGCCACCACTATCTTGCCCTCCCCAACAACATCTTTGCAGCCAGAGTCCAACACAGTTATGTGGCACAAGCCGGAAACCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp CTTGTGCCACATAACTGTGTTGGACTCTGGCTGCAAAGATGTTGTTaGGGAGGGCAAGATAGTGGTGGCTGGCTCTGGAGTTGTAGGAGG +
Preference number: 5 (lower is better)
Translates to: LVPHNCVGLWLQRCC*GGQDSGGWLWSCRR
Trigger: CCTCCTACAACTCCAGAGCCAGCCACCACTATCTTGCCCTCCCCAACAACATCTTTGCAGCCAGAGTCCAACACAGTTATGTGGCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 90 bp GAACATCCCATTCTTCTCAGGCCTGAGGGAGGTCAGTCTGCAACTTaGGTTGAAGGAGTCATTTTGGAACAAGGGTCCCAGCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: EHPILLRPEGGQSAT*VEGVILEQGSQQAL
Trigger: CAACGCCTGCTGGGACCCTTGTTCCAAAATGACTCCTTCAACTCAAGTTGCAGACTGACCTCCCTCAGGCCTGAGAAGAATGGGATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 90 bp AGTGGGATCAGGGTAGTGAGTGCAGACAGCATCTACTCCTGTGCCTaGACCATCATTTTCAGGTCTGAGCAAGGAGAGTTTGCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: SGIRVVSADSIYSCA*TIIFRSEQGEFAAR
Trigger: TCTGGCTGCAAACTCTCCTTGCTCAGACCTGAAAATGATGGTGCAGGCACAGGAGTAGATGCTGTCTGCACTCACTACCCTGATCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 90 bp GTGATGGTCTTCAGATGGTGCGCTCTAGCTGTGGTGGATTCTGGCTaGACAGATGTCAGTGTAAAAGGCAGGATGGTGGTACTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: VMVFRWCALAVVDSG*TDVSVKGRMVVLGS
Trigger: TGAGCCAAGTACCACCATCCTGCCTTTTACACTGACATCTGTGCAGCCAGAATCCACCACAGCTAGAGCGCACCATCTGAAGACCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 90 bp GAAAGGCACCAGAGGAGAGCCAGGCACTGTAGAGAGTGTAGGTTTTaGAGTGGAGGTCTCAGTGAAAAACAGAGAGGAAGTCACCGGAGT +
Preference number: 5 (lower is better)
Translates to: ERHQRRARHCRECRF*SGGLSEKQRGSHRS
Trigger: ACTCCGGTGACTTCCTCTCTGTTTTTCACTGAGACCTCCACTGCAAAACCTACACTCTCTACAGTGCCTGGCTCTCCTCTGGTGCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207509.2
CDS CCA 90 bp CTCTGGCTGCAAAGATGTTGTTGGGGAGGGCAAGATAGTGGTGGCTaGCTCTGGAGTTGTAGGAGGTACATCTGGACCAGGTTCATTGTA +
Preference number: 5 (lower is better)
Translates to: LWLQRCCWGGQDSGG*LWSCRRYIWTRFIV
Trigger: TACAATGAACCTGGTCCAGATGTACCTCCTACAACTCCAGAGCCAGCCACCACTATCTTGCCCTCCCCAACAACATCTTTGCAGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp GATTGTGAAGGTTTCCGGCTTGTGCCACATAACTGTGTTGGACTCTaGCTGCAAAGATGTTGTTGGGGAGGGCAAGATAGTGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: DCEGFRLVPHNCVGL*LQRCCWGGQDSGGW
Trigger: CCAGCCACCACTATCTTGCCCTCCCCAACAACATCTTTGCAGCCAGAGTCCAACACAGTTATGTGGCACAAGCCGGAAACCTTCACAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 90 bp GTGACATTTGGGAAGCATGAACAGTGTTGGAGCTTGACTGAGAGGTaGTGCTCCAGCTTGGAACGTAAACAGTCACAGGGCCTAAGCTTG +
Preference number: 5 (lower is better)
Translates to: VTFGKHEQCWSLTER*CSSLERKQSQGLSL
Trigger: CAAGCTTAGGCCCTGTGACTGTTTACGTTCCAAGCTGGAGCAGCACCTCTCAGTCAAGCTCCAACACTGTTCATGCTTCCCAAATGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GATGTAGAAGCCAGAGAACCCTTGCCCAGGCCTGCAGTGTCTCCATaGACAGCTCCATTAGATATGTCTGTGTGGTATTGCATGCCATCT +
Preference number: 5 (lower is better)
Translates to: DVEAREPLPRPAVSP*TAPLDMSVWYCMPS
Trigger: AGATGGCATGCAATACCACACAGACATATCTAATGGAGCTGTCCATGGAGACACTGCAGGCCTGGGCAAGGGTTCTCTGGCTTCTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GAAGGGGTTACAGTTAGAGTGGATGTGCTTGTCTCAGTGCCAGTGTaGCCAGAGAGAGAGGCTGCTTCTTCAGAAGCACCAGATGAAAGA +
Preference number: 5 (lower is better)
Translates to: EGVTVRVDVLVSVPV*PEREAASSEAPDER
Trigger: TCTTTCATCTGGTGCTTCTGAAGAAGCAGCCTCTCTCTCTGGCCACACTGGCACTGAGACAAGCACATCCACTCTAACTGTAACCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp CTGCAAAGATGTTGTTGGGGAGGGCAAGATAGTGGTGGCTGGCTCTaGAGTTGTAGGAGGTACATCTGGACCAGGTTCATTGTAGCCATT +
Preference number: 5 (lower is better)
Translates to: LQRCCWGGQDSGGWL*SCRRYIWTRFIVAI
Trigger: AATGGCTACAATGAACCTGGTCCAGATGTACCTCCTACAACTCCAGAGCCAGCCACCACTATCTTGCCCTCCCCAACAACATCTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp GATTGTGATGGTCTTCAGATGGTGCGCTCTAGCTGTGGTGGATTCTaGCTGCACAGATGTCAGTGTAAAAGGCAGGATGGTGGTACTTGG +
Preference number: 5 (lower is better)
Translates to: DCDGLQMVRSSCGGF*LHRCQCKRQDGGTW
Trigger: CCAAGTACCACCATCCTGCCTTTTACACTGACATCTGTGCAGCCAGAATCCACCACAGCTAGAGCGCACCATCTGAAGACCATCACAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp CAATGGAGGCAGAAACAGAAGAGGGCGTACTGTATCTGTCTGCATTaGCAGAAACTGGAGAATGTGAGGGTGCCTCATCTGGAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: QWRQKQKRAYCICLH*QKLENVRVPHLEFL
Trigger: CAAGAACTCCAGATGAGGCACCCTCACATTCTCCAGTTTCTGCCAATGCAGACAGATACAGTACGCCCTCTTCTGTTTCTGCCTCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GGTGGGCCAAGGTGTTGCGGATTCTGTTTGTCCTTGGGAAATATCTaGAGTCGAAAGCATTGCAAAGCTTTCTGTGCCAGGTTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: GGPRCCGFCLSLGNI*SRKHCKAFCARLSD
Trigger: GTCACTCAACCTGGCACAGAAAGCTTTGCAATGCTTTCGACTCCAGATATTTCCCAAGGACAAACAGAATCCGCAACACCTTGGCCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp AGTGTCTTATTCAAGAAGACTTGCTTCACAAGGTTGGGATCCAGATaGGAGGAGAACAGTGCCTCAAGAGTGACCACTGTGGAGCCAGAC +
Preference number: 5 (lower is better)
Translates to: SVLFKKTCFTRLGSR*EENSASRVTTVEPD
Trigger: GTCTGGCTCCACAGTGGTCACTCTTGAGGCACTGTTCTCCTCTCATCTGGATCCCAACCTTGTGAAGCAAGTCTTCTTGAATAAGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 90 bp CCTTCATGCCCAGTATGGGTGATCCATTGGGCTGGGGATTTGGATTaGCTTGAAGAAACTGGCAGAGTGGAAGGCAATGAATGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PSCPVWVIHWAGDLD*LEETGRVEGNEWLS
Trigger: AGAAAGCCATTCATTGCCTTCCACTCTGCCAGTTTCTTCAAGTCAATCCAAATCCCCAGCCCAATGGATCACCCATACTGGGCATGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp GTGATTTGCTGGGGCTGGTTACTGCAGTCTGGTGTGTGTAACCATTaGCATAGAGACTATTCTGGTCAAGGCTATAGGGACCCAGTTGAG +
Preference number: 5 (lower is better)
Translates to: VICWGWLLQSGVCNH*HRDYSGQGYRDPVE
Trigger: CTCAACTGGGTCCCTATAGCCTTGACCAGAATAGTCTCTATGTCAATGGTTACACACACCAGACTGCAGTAACCAGCCCCAGCAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp TGGATGTCTTCATGTCTATCACGTGCAGATCTTTCAACTGGTAGGTaGCACCCAGCCAGTGGGAGGAGGCATTCAGTGTCTTATTCAAGA +
Preference number: 5 (lower is better)
Translates to: WMSSCLSRADLSTGR*HPASGRRHSVSYSR
Trigger: TCTTGAATAAGACACTGAATGCCTCCTCCCACTGGCTGGGTGCCACCTACCAGTTGAAAGATCTGCACGTGATAGACATGAAGACATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp GGGCAAGATAGTGGTGGCTGGCTCTGGAGTTGTAGGAGGTACATCTaGACCAGGTTCATTGTAGCCATTGATGAAAAGGCTGTCTTTATC +
Preference number: 5 (lower is better)
Translates to: GQDSGGWLWSCRRYI*TRFIVAIDEKAVFI
Trigger: GATAAAGACAGCCTTTTCATCAATGGCTACAATGAACCTGGTCCAGATGTACCTCCTACAACTCCAGAGCCAGCCACCACTATCTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 90 bp ATAGTTGCCCAGCTGGGTGATTCCATAGGTAAGATGACTCAGCTCTaGGTACAGTTCCTGGGTGTCAATCCCAGAATTTGCAGCGTTATG +
Preference number: 5 (lower is better)
Translates to: IVAQLGDSIGKMTQL*VQFLGVNPRICSVM
Trigger: CATAACGCTGCAAATTCTGGGATTGACACCCAGGAACTGTACTCAGAGCTGAGTCATCTTACCTATGGAATCACCCAGCTGGGCAACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 90 bp GTGACAGTCTTCAAATGGTACCCCACAGCTGTGGTGGATTCTGTTTaGACAAGTATTGATGGGGAAGGCAGCATAGTAGTGGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: VTVFKWYPTAVVDSV*TSIDGEGSIVVAVS
Trigger: TGAAACAGCCACTACTATGCTGCCTTCCCCATCAATACTTGTGCAAACAGAATCCACCACAGCTGTGGGGTACCATTTGAAGACTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp CAGAGGAAACAGCTGCTGTTGAAAGGGTTGACCTGTCTTTTCCTCTaGAACTGGTGGCTGTGGACACCTTGGAATCTAATTCAACTTGTG +
Preference number: 5 (lower is better)
Translates to: QRKQLLLKGLTCLFL*NWWLWTPWNLIQLV
Trigger: CACAAGTTGAATTAGATTCCAAGGTGTCCACAGCCACCAGTTCCAGAGGAAAAGACAGGTCAACCCTTTCAACAGCAGCTGTTTCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp AGGCAGGATGGTGGTACTTGGCTCAGGAGTTGTAGTAAGTATGTCTaGACCAAGAATGGGGTAACCATTCACATAGAGACTATGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RQDGGTWLRSCSKYV*TKNGVTIHIETMLL
Trigger: GAGGAGCATAGTCTCTATGTGAATGGTTACCCCATTCTTGGTCCAGACATACTTACTACAACTCCTGAGCCAAGTACCACCATCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp GATGGTGAAGTTGATAGTAAAATGCTCCAGGACAGGCCCTGCTGTTaGAGATGTGATAGACTGGATCTGGTGTGTATAACATGGCCACTG +
Preference number: 5 (lower is better)
Translates to: DGEVDSKMLQDRPCC*RCDRLDLVCITWPL
Trigger: CAGTGGCCATGTTATACACACCAGATCCAGTCTATCACATCTCCAACAGCAGGGCCTGTCCTGGAGCATTTTACTATCAACTTCACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207857.2
CDS TCA 90 bp TGTAGACATGGATGCACTGGGATGTCCCTCAGCATTTGTGTCCAATaGTTCTATGGGTTGTGGTTCAGAAGGAGAGTGTTTCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: CRHGCTGMSLSICVQ*FYGLWFRRRVFHRC
Trigger: ACACCTGTGAAACACTCTCCTTCTGAACCACAACCCATAGAATCATTGGACACAAATGCTGAGGGACATCCCAGTGCATCCATGTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 90 bp GCAGTGTCTCCATGGACAGCTCCATTAGATATGTCTGTGTGGTATTaGATGCCATCTTCCATTTCTGAAGGAGTAGTAATCCTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: AVSPWTAPLDMSVWY*MPSSISEGVVILWR
Trigger: CCTCCAGAGGATTACTACTCCTTCAGAAATGGAAGATGGCATGCAATACCACACAGACATATCTAATGGAGCTGTCCATGGAGACACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 90 bp TTTTCCAGAATGGATGACCCACAAGGCTGTGGTCTCTCTTTGATCTaGAGGAACAGACAGAGTTGGAGCAGTTTTATGTGTCTCTACCAC +
Preference number: 5 (lower is better)
Translates to: FSRMDDPQGCGLSLI*RNRQSWSSFMCLYH
Trigger: GTGGTAGAGACACATAAAACTGCTCCAACTCTGTCTGTTCCTGCAGATCAAAGAGAGACCACAGCCTTGTGGGTCATCCATTCTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 90 bp GGAAGATTAGAGATGGTAAAGTTGATTGTGATGGTCTTCAGATGGTaGGCTCTAGCTGTGGTGGATTCTGGCTGCACAGATGTCAGTGTA +
Preference number: 5 (lower is better)
Translates to: GRLEMVKLIVMVFRW*ALAVVDSGCTDVSV
Trigger: TACACTGACATCTGTGCAGCCAGAATCCACCACAGCTAGAGCGCACCATCTGAAGACCATCACAATCAACTTTACCATCTCTAATCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp TGGTATTGCATGCCATCTTCCATTTCTGAAGGAGTAGTAATCCTCTaGAGGGATGAGCTGGCTGCAGTGTCAGTAGTAGTGGAAATAGGA +
Preference number: 5 (lower is better)
Translates to: WYCMPSSISEGVVIL*RDELAAVSVVVEIG
Trigger: TCCTATTTCCACTACTACTGACACTGCAGCCAGCTCATCCCTCCAGAGGATTACTACTCCTTCAGAAATGGAAGATGGCATGCAATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp AGGCCTGCAGTGTCTCCATGGACAGCTCCATTAGATATGTCTGTGTaGTATTGCATGCCATCTTCCATTTCTGAAGGAGTAGTAATCCTC +
Preference number: 5 (lower is better)
Translates to: RPAVSPWTAPLDMSV*YCMPSSISEGVVIL
Trigger: GAGGATTACTACTCCTTCAGAAATGGAAGATGGCATGCAATACCACACAGACATATCTAATGGAGCTGTCCATGGAGACACTGCAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp ACTTTATTGAACTTGGCTGATCCCGGGACCCACATGTCATTCGTGTaGGGTAGGTTAGTGATAGTGAAGTTAAGAGTGCACCTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: TLLNLADPGTHMSFV*GRLVIVKLRVHLSR
Trigger: TCTGCTAAGGTGCACTCTTAACTTCACTATCACTAACCTACCCCACACGAATGACATGTGGGTCCCGGGATCAGCCAAGTTCAATAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS-3UTR CAA 90 bp TGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTAGAACCCCTGTGTGGTTGTaGTTGTTGGAGACAGACCTG +
Preference number: 5 (lower is better)
Translates to: WFIYSLNPAREEPSLEGRTPVWL*LLETDL
Trigger: CAGGTCTGTCTCCAACAACAACAACCACACAGGGGT...TCTACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS TCA 90 bp GTGAATAATGATGGTGTCACTTTCATTATACCTGGAGAGCCACCCTaGGAAGGCACAGATAAACTTGTGTCTTCTCCAGCAAGGGTGAGT +
Preference number: 5 (lower is better)
Translates to: VNNDGVTFIIPGEPP*EGTDKLVSSPARVS
Trigger: ACTCACCCTTGCTGGAGAAGACACAAGTTTATCTGTGCCTTCTCAGGGTGGCTCTCCAGGTATAATGAAAGTGACACCATCATTATTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 90 bp TGTGAACAGCTCCTCACTGAGTTCTCCAGTGGTGGTATTTGGTGCTaGAGCTCCAAAACTATTACCATTTATGTAGAGACTGTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: CEQLLTEFSSGGIWC*SSKTITIYVETVLV
Trigger: GACCAGAACAGTCTCTACATAAATGGTAATAGTTTTGGAGCTGCAGCACCAAATACCACCACTGGAGAACTCAGTGAGGAGCTGTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 90 bp CACTGTGAACAGCTCCTCACTGAGTTCTCCAGTGGTGGTATTTGGTaGTGCAGCTCCAAAACTATTACCATTTATGTAGAGACTGTTCTG +
Preference number: 5 (lower is better)
Translates to: HCEQLLTEFSSGGIW*CSSKTITIYVETVL
Trigger: CAGAACAGTCTCTACATAAATGGTAATAGTTTTGGAGCTGCAGCACCAAATACCACCACTGGAGAACTCAGTGAGGAGCTGTTCACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp GAGGCAGGCAGTGTAGACATATCTGAACTATGTTGTTCTCCATTATaGGTGACCAATGAAGCTGTGGTGTGTGGTCCAGAAGACATAAGT +
Preference number: 5 (lower is better)
Translates to: EAGSVDISELCCSPL*VTNEAVVCGPEDIS
Trigger: ACTTATGTCTTCTGGACCACACACCACAGCTTCATTGGTCACCCATAATGGAGAACAACATAGTTCAGATATGTCTACACTGCCTGCCTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp TATGGAAGATTAGAGATGGTAAAGTTGATTGTGATGGTCTTCAGATaGTGCGCTCTAGCTGTGGTGGATTCTGGCTGCACAGATGTCAGT +
Preference number: 5 (lower is better)
Translates to: YGRLEMVKLIVMVFR*CALAVVDSGCTDVS
Trigger: ACTGACATCTGTGCAGCCAGAATCCACCACAGCTAGAGCGCACCATCTGAAGACCATCACAATCAACTTTACCATCTCTAATCTTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS-3UTR CAA 90 bp ATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTGTGTGGTTGTTGTTGTaGGAGACAGACCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: MWFIYSLNPAREEPSLEGVWLLL*ETDLKA
Trigger: AGCCTTCAGGTCTGTCTCCAACAACAACAACCACAC...ACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR CAA 90 bp TGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTAGACCTGTGTGGTTGTTGTaGTTGGAGACAGACCTGAAG +
Preference number: 5 (lower is better)
Translates to: WFIYSLNPAREEPSLEGRPVWLL*LETDLK
Trigger: CTTCAGGTCTGTCTCCAACAACAACAACCACACAGG...TCTACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS-3UTR CAA 90 bp CCAATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAATCTACCCCTGTGTGGTaGTTGTTGTTGGAGACAGAC +
Preference number: 5 (lower is better)
Translates to: PMWFIYSLNPAREEPSLESTPVW*LLLETD
Trigger: GTCTGTCTCCAACAACAACAACCACACAGGGGTAGA...TTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS TCA 90 bp GGGATACTAATGGAGGTTCCAGAGGAAGTATCTTGCAATGTTGATTaGAGGTCTGAAATGGATATGCTGTCAGCAGACGTAAGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: GILMEVPEEVSCNVD*RSEMDMLSADVSPV
Trigger: GACAGGACTTACGTCTGCTGACAGCATATCCATTTCAGACCTTCAATCAACATTGCAAGATACTTCCTCTGGAACCTCCATTAGTATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp TCACTGAATGGATTTCTGTGCCAGTGTGAGTTTGCTCTGAAGGCATaGTTTCTGTTTTACCTGGAGATGCAGTCAAAGCAGACATGGTTG +
Preference number: 5 (lower is better)
Translates to: SLNGFLCQCEFALKA*FLFYLEMQSKQTWL
Trigger: CAACCATGTCTGCTTTGACTGCATCTCCAGGTAAAACAGAAATCATGCCTTCAGAGCAAACTCACACTGGCACAGAAATCCATTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp GTGAAGAGTGATTGTGTTACTTCTGTTATATCTGGAGTGACATGCTaGGAAGACACAGACAAACTGGGCTTTCCTCCATGGTGGATTTCC +
Preference number: 5 (lower is better)
Translates to: VKSDCVTSVISGVTC*EDTDKLGFPPWWIS
Trigger: GGAAATCCACCATGGAGGAAAGCCCAGTTTGTCTGTGTCTTCTCAGCATGTCACTCCAGATATAACAGAAGTAACACAATCACTCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp CTGGGCTGTTCTCCAGCATGGGTGATCTGTGTATCAGAAGAAGTTTaGTTCTTAGTTAATGAATTCACCATCTCAGGAGCACTGGTTGAG +
Preference number: 5 (lower is better)
Translates to: LGCSPAWVICVSEEV*FLVNEFTISGALVE
Trigger: CTCAACCAGTGCTCCTGAGATGGTGAATTCATTAACTAAGAATCAAACTTCTTCTGATACACAGATCACCCATGCTGGAGAACAGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp AAAGAGTTGTGGCTGAGCTGGTCTCTACCTCAGATACTGAGGAAGTaGTGTCATTATAAGAAAATGTGGAAGTTATTGTGGGGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: KELWLSWSLPQILRK*CHYKKMWKLLWGVG
Trigger: CCCCACACCCCACAATAACTTCCACATTTTCTTATAATGACATCACTTCCTCAGTATCTGAGGTAGAGACCAGCTCAGCCACAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 90 bp TATGGAGTTTGGGGGCCCAGTGGGCATTCCAGTGGAGATTTCTTCTaGTTTGATTACCTGGTTAGTGATTGGATAGGAAATGCTGTTATT +
Preference number: 5 (lower is better)
Translates to: YGVWGPSGHSSGDFF*FDYLVSDWIGNAVI
Trigger: AATAACAGCATTTCCTATCCAATCACTAACCAGGTAATCAAAGCAGAAGAAATCTCCACTGGAATGCCCACTGGGCCCCCAAACTCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 90 bp GGAAGGTTGGATATGGTGAAGTTGATTGTAAGAATCTTTAGATGGTaGCCTGTGGTAGGTTCTGGATGCAAAGCTGTAGATGGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: GRLDMVKLIVRIFRW*PVVGSGCKAVDGEG
Trigger: ACCTTCTCCATCTACAGCTTTGCATCCAGAACCTACCACAGGGCACCATCTAAAGATTCTTACAATCAACTTCACCATATCCAACCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp GGCACTGAAACAGATGTGGTGGTGTATTTGAATTCAGGTACAGAATaGCTGTCTCCCATGTTAGACCCTGATGTGACTGAGGAAAATGTA +
Preference number: 5 (lower is better)
Translates to: GTETDVVVYLNSGTE*LSPMLDPDVTEENV
Trigger: TACATTTTCCTCAGTCACATCAGGGTCTAACATGGGAGACAGCCATTCTGTACCTGAATTCAAATACACCACCACATCTGTTTCAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GATGGTGAAGTTGATAGTAAAATGCTCCAGGACAGGCCCTGCTGTTaGAGATGTGATAGACTGGATCTGGTGTGTATAACCATTGATGTA +
Preference number: 5 (lower is better)
Translates to: DGEVDSKMLQDRPCC*RCDRLDLVCITIDV
Trigger: TACATCAATGGTTATACACACCAGATCCAGTCTATCACATCTCCAACAGCAGGGCCTGTCCTGGAGCATTTTACTATCAACTTCACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GTTCACTGTGAACAGCTCCTCACTGAGTTCTCCAGTGGTGGTATTTaGTGCTGCAGCTCCAAAACTATTACCATTTATGTAGAGACTGTT +
Preference number: 5 (lower is better)
Translates to: VHCEQLLTEFSSGGI*CCSSKTITIYVETV
Trigger: AACAGTCTCTACATAAATGGTAATAGTTTTGGAGCTGCAGCACCAAATACCACCACTGGAGAACTCAGTGAGGAGCTGTTCACAGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS-3UTR CAA 90 bp ATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTGAGAACTGGAACTGGTaGTTGGTATTTCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: MWFIYSLNPAREEPSLEGENWNW*LVFLLA
Trigger: TGCCAGCAGAAATACCAACAACCAGTTCCAGTTCTC...ACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS TCA 90 bp TGTTTTGAGAATACCCATCCACAAAGACACTCTTCCTATCCAGTGTaGAGTTCAGCAACTGGGTACCATTGTGCGTCATTCGAAGGAATT +
Preference number: 5 (lower is better)
Translates to: CFENTHPQRHSSYPV*SSATGYHCASFEGI
Trigger: AATTCCTTCGAATGACGCACAATGGTACCCAGTTGCTGAACTTCACACTGGATAGGAAGAGTGTCTTTGTGGATGGGTATTCTCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 90 bp GAAACATCCAGAGTTGAAGTCACTGAATGGATTTCTGTGCCAGTGTaGGTTTGCTCTGAAGGCATGATTTCTGTTTTACCTGGAGATGCA +
Preference number: 5 (lower is better)
Translates to: ETSRVEVTEWISVPV*VCSEGMISVLPGDA
Trigger: TGCATCTCCAGGTAAAACAGAAATCATGCCTTCAGAGCAAACTCACACTGGCACAGAAATCCATTCAGTGACTTCAACTCTGGATGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp CTGGGCTGTTCTCCAGCATGGGTGATCTGTGTATCAGAAGAAGTTTaGTTCTTAGTTACTGAATTCATTTTCTCAGGTGCACTGGTTGAG +
Preference number: 5 (lower is better)
Translates to: LGCSPAWVICVSEEV*FLVTEFIFSGALVE
Trigger: CTCAACCAGTGCACCTGAGAAAATGAATTCAGTAACTAAGAATCAAACTTCTTCTGATACACAGATCACCCATGCTGGAGAACAGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp TTTCCTCTTCCAGTATGGGCAGACCATGTGGTTGTAGATCCTGCTTaGTCTATGGAAATAACCTGTGTAGAAGTTGCTGAATGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: FPLPVWADHVVVDPA*SMEITCVEVAEWLS
Trigger: AGAAAGCCATTCAGCAACTTCTACACAGGTTATTTCCATAGATCAAGCAGGATCTACAACCACATGGTCTGCCCATACTGGAAGAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 90 bp AAACTGGACTGTGTCCCAGCATGGGTAACCAGTGATGTTATGGTGTaGACATTCGAAGAAGTATGGTTCCAAGATTTTGAGATCATCATG +
Preference number: 5 (lower is better)
Translates to: KLDCVPAWVTSDVMV*TFEEVWFQDFEIIM
Trigger: CATGATGATCTCAAAATCTTGGAACCATACTTCTTCGAATGTGCACACCATAACATCACTGGTTACCCATGCTGGGACACAGTCCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp CACTGTGTTGGGTCTCTGTGTTTGAAGAAGTGGTTGATAGATCTTTaGAAGTTACCATGTTTGATGTCACCACAGTATGTTCTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: HCVGSLCLKKWLIDL*KLPCLMSPQYVLCG
Trigger: GCCACAGAGAACATACTGTGGTGACATCAAACATGGTAACTTCCAAAGATCTATCAACCACTTCTTCAAACACAGAGACCCAACACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GGTATATTCACAGCAGTAGCAACATCAGTCTCAGAACTTGGCAAGTaGAGAGTGGATTCAAGAGGTGAAGGTTTGTTTGTTTGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: GIFTAVATSVSELGK*RVDSRGEGLFVCRD
Trigger: ATCCCTACAAACAAACAAACCTTCACCTCTTGAATCCACTCTCCACTTGCCAAGTTCTGAGACTGATGTTGCTACTGCTGTGAATATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp AGGTCATCCCTCTGGGAGAAAGTGTTGCTGTTGTGTCAATCAAAGTaGTTTCAGCTGAAGGCAGTATATCAGTTCTTGGAACATGGATAT +
Preference number: 5 (lower is better)
Translates to: RSSLWEKVLLLCQSK*FQLKAVYQFLEHGY
Trigger: ATATCCATGTTCCAAGAACTGATATACTGCCTTCAGCTGAAACCACTTTGATTGACACAACAGCAACACTTTCTCCCAGAGGGATGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GAGACATGTAAAGTAGACATGGATGAAGTGGATGGCCCCACAACATaGGTGACTAATGGAACTTTAGTAGGTGGTTCTGAAGGAATAACT +
Preference number: 5 (lower is better)
Translates to: ETCKVDMDEVDGPTT*VTNGTLVGGSEGIT
Trigger: AGTTATTCCTTCAGAACCACCTACTAAAGTTCCATTAGTCACCCATGTTGTGGGGCCATCCACTTCATCCATGTCTACTTTACATGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp GAAATATCTGGAGTCGAAAGCATTGCAAAGCTTTCTGTGCCAGGTTaGGTGACCACTGATGGTTTGATTTTTGTTCTACCTGTAGAGGTT +
Preference number: 5 (lower is better)
Translates to: EISGVESIAKLSVPG*VTTDGLIFVLPVEV
Trigger: AACCTCTACAGGTAGAACAAAAATCAAACCATCAGTGGTCACTCAACCTGGCACAGAAAGCTTTGCAATGCTTTCGACTCCAGATATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp TGGAGATTCCAGTGGAAGTGTCCTCTGATATTGAATGGTGTAACTTaGAAAGGAATGTACTGCCAGCAGATATATCTTTTGCCACAGATG +
Preference number: 5 (lower is better)
Translates to: WRFQWKCPLILNGVT*KGMYCQQIYLLPQM
Trigger: CATCTGTGGCAAAAGATATATCTGCTGGCAGTACATTCCTTTCCAAGTTACACCATTCAATATCAGAGGACACTTCCACTGGAATCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp CCTGTCCTAGATTCTAAAGGAGAAGGGCTAGTGGAAAGTTCAGTATaGCTAGTGCTGTATTCTGTGCTTGTGTTTATCTGTTCAGATGTA +
Preference number: 5 (lower is better)
Translates to: PVLDSKGEGLVESSV*LVLYSVLVFICSDV
Trigger: TACATCTGAACAGATAAACACAAGCACAGAATACAGCACTAGCCATACTGAACTTTCCACTAGCCCTTCTCCTTTAGAATCTAGGACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp ATTTCTGTTATTCTTGATGGAACTGAATTAACTAGGACAGTGCCTTaGGGATGCATTGCAGGACTATCAGTTTCTACTCTTGTTGCCGGA +
Preference number: 5 (lower is better)
Translates to: ISVILDGTELTRTVP*GCIAGLSVSTLVAG
Trigger: TCCGGCAACAAGAGTAGAAACTGATAGTCCTGCAATGCATCCCCAAGGCACTGTCCTAGTTAATTCAGTTCCATCAAGAATAACAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GAGACATGTAAAGTAGACATGGATGAAGTGGATGGCCCCACAACATaGGTAACTAATGGAACTTTAGTAGGTGGTTCTGAAGGAATAACT +
Preference number: 5 (lower is better)
Translates to: ETCKVDMDEVDGPTT*VTNGTLVGGSEGIT
Trigger: AGTTATTCCTTCAGAACCACCTACTAAAGTTCCATTAGTTACCCATGTTGTGGGGCCATCCACTTCATCCATGTCTACTTTACATGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp TATGGAAGATTGGAAATAGTGAAGCTGACTGTGACAGTCTTCAAATaGTACCCCACAGCTGTGGTGGATTCTGTTTGCACAAGTATTGAT +
Preference number: 5 (lower is better)
Translates to: YGRLEIVKLTVTVFK*YPTAVVDSVCTSID
Trigger: ATCAATACTTGTGCAAACAGAATCCACCACAGCTGTGGGGTACCATTTGAAGACTGTCACAGTCAGCTTCACTATTTCCAATCTTCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp TATGGAAGGTTGGATATGGTGAAGTTGATTGTAAGAATCTTTAGATaGTGCCCTGTGGTAGGTTCTGGATGCAAAGCTGTAGATGGAGAA +
Preference number: 5 (lower is better)
Translates to: YGRLDMVKLIVRIFR*CPVVGSGCKAVDGE
Trigger: TTCTCCATCTACAGCTTTGCATCCAGAACCTACCACAGGGCACCATCTAAAGATTCTTACAATCAACTTCACCATATCCAACCTTCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 90 bp TTATATGAAGAACCTGGAGTTGAAAGCCCTATAGTATCCAGGCTTTaGATTGAGTTGCTCCCAGAAGTTGCACTTGTGTCTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: LYEEPGVESPIVSRL*IELLPEVALVSCPF
Trigger: AAATGGACAAGACACAAGTGCAACTTCTGGGAGCAACTCAATTCAAAGCCTGGATACTATAGGGCTTTCAACTCCAGGTTCTTCATATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp AGTCGAAAGCATTGCAAAGCTTTCTGTGCCAGGTTGAGTGACCACTaGTGGTTTGATTTTTGTTCTACCTGTAGAGGTTTGCAGAATATA +
Preference number: 5 (lower is better)
Translates to: SRKHCKAFCARLSDH*WFDFCSTCRGLQNI
Trigger: TATATTCTGCAAACCTCTACAGGTAGAACAAAAATCAAACCATCAGTGGTCACTCAACCTGGCACAGAAAGCTTTGCAATGCTTTCGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp TCAGAATTACTGTTCCATGGTGTAATGGTCCCATTAGTTTCTGCTTaGCCTGGTGAAGCAGGCAAAGTTGAAGTCATTGCAAACCTTTTT +
Preference number: 5 (lower is better)
Translates to: SELLFHGVMVPLVSA*PGEAGKVEVIANLF
Trigger: AAAAAGGTTTGCAATGACTTCAACTTTGCCTGCTTCACCAGGTCAAGCAGAAACTAATGGGACCATTACACCATGGAACAGTAATTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 90 bp CTGTATGGTTATATTCAGTGGCACATAGCCACTAGATGTAGTTTCTaGAGTCTGGTGAGTGTAACCATTGACATAGATACTATTCTGGTC +
Preference number: 5 (lower is better)
Translates to: LYGYIQWHIATRCSF*SLVSVTIDIDTILV
Trigger: GACCAGAATAGTATCTATGTCAATGGTTACACTCACCAGACTGCAGAAACTACATCTAGTGGCTATGTGCCACTGAATATAACCATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 90 bp GAGTACTTGGTGGAGATTCCAGTGGAAGTGTCCTCTGATATTGAATaGTGTAACTTGGAAAGGAATGTACTGCCAGCAGATATATCTTTT +
Preference number: 5 (lower is better)
Translates to: EYLVEIPVEVSSDIE*CNLERNVLPADISF
Trigger: AAAAGATATATCTGCTGGCAGTACATTCCTTTCCAAGTTACACCATTCAATATCAGAGGACACTTCCACTGGAATCTCCACCAAGTACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp AGTTTGATCTCTGTGGTAATAGAGGAGAAGCAGAAGCAGAAATCTTaGTTGGTATTATCAACAAGGAAGAGGCAGTACTATCTGCCGAAA +
Preference number: 5 (lower is better)
Translates to: SLISVVIEEKQKQKS*LVLSTRKRQYYLPK
Trigger: TTTCGGCAGATAGTACTGCCTCTTCCTTGTTGATAATACCAACCAAGATTTCTGCTTCTGCTTCTCCTCTATTACCACAGAGATCAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GTTCAGAAGGATTATGAGTTTTTGAGGCCATCAAGTCTGGAATACTaGGAGAGATGTCTGTTCTTAGAATACTTGAGGTGGCTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: VQKDYEFLRPSSLEY*ERCLFLEYLRWLLF
Trigger: AAAGAGAAGCCACCTCAAGTATTCTAAGAACAGACATCTCTCCCAGTATTCCAGACTTGATGGCCTCAAAAACTCATAATCCTTCTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS-3UTR CAA 90 bp ATGTGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTAATACTTCTTTTGGTTaGCTGGTATTTGGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: MWFIYSLNPAREEPSLEGNTSFG*LVFGGA
Trigger: AGCACCACCAAATACCAGCAAACCAAAAGAAGTATT...ACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS TCA 90 bp TTCAAAAGAGTGGTGATGTTGGATGATTCCTCAACATTAACTACTTaGCTGATGTCAGTCCTTGGAAAGAAAAGTGTAGAGCTACTGGAG +
Preference number: 5 (lower is better)
Translates to: FKRVVMLDDSSTLTT*LMSVLGKKSVELLE
Trigger: CTCCAGTAGCTCTACACTTTTCTTTCCAAGGACTGACATCAGTCAAGTAGTTAATGTTGAGGAATCATCCAACATCACCACTCTTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp CTTTCTTTCTCTGATTGGGTTACCCATGCAGTTGTTAATTCTTCTTaGCCTGCAGAAACATCCAGAGTTGAAGTCACTGAATGGATTTCT +
Preference number: 5 (lower is better)
Translates to: LSFSDWVTHAVVNSS*PAETSRVEVTEWIS
Trigger: AGAAATCCATTCAGTGACTTCAACTCTGGATGTTTCTGCAGGTCAAGAAGAATTAACAACTGCATGGGTAACCCAATCAGAGAAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp AGTAGGAATCACTGTGTTTCTTTCATAGCCCAAGTTGGTGAAGAGTaGTTGTGTTACTTCTGTTATATCTGGAGTGACATGCTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: SRNHCVSFIAQVGEE*LCYFCYIWSDMLRR
Trigger: TCTTCTCAGCATGTCACTCCAGATATAACAGAAGTAACACAATCACTCTTCACCAACTTGGGCTATGAAAGAAACACAGTGATTCCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp GTTTGTTGTTCTGAAGGAAATACAGATGGTGAGGTCATCATTTCCTaGACACCAGGTAAAATAGTTGTAGATAAAGGCCCAGAAGTAGCT +
Preference number: 5 (lower is better)
Translates to: VCCSEGNTDGEVIIS*TPGKIVVDKGPEVA
Trigger: AGCTACTTCTGGGCCTTTATCTACAACTATTTTACCTGGTGTTCAGGAAATGATGACCTCACCATCTGTATTTCCTTCAGAACAACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GGCTCACTTCAGTTTTGGTGGAATTATAAGATTTTTGTGAGGTTCTaGTGTCCTTTGAAATTGCTAGTTCACTATTGCTCCAGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: GSLQFWWNYKIFVRF*CPLKLLVHYCSSLE
Trigger: TTCCAAGCTGGAGCAATAGTGAACTAGCAATTTCAAAGGACACCAGAACCTCACAAAAATCTTATAATTCCACCAAAACTGAAGTGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS-3UTR CAA 90 bp TGGTTTATTTATTCTTTGAACCCTGCTAGGGAAGAGCCATCACTGGAAGGTAGAATCATCATCTCTGTTTaGAGAATACCCATCCACAAA +
Preference number: 5 (lower is better)
Translates to: WFIYSLNPAREEPSLEGRIIISV*RIPIHK
Trigger: TTTGTGGATGGGTATTCTCAAAACAGAGATGATGAT...TCTACCTTCCAGTGATGGCTCTTCCCTAGCAGGGTTCAAAGAATAAATAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034653.7
CDS TCA 90 bp TCTCTAGATGACTCAGAGAGTGTTGATACAGAGGAACTTAGTTCATaGCCCACAGTAATAGTATTCACATTGGTTACTGTGAAACTTGAG +
Preference number: 5 (lower is better)
Translates to: SLDDSESVDTEELSS*PTVIVFTLVTVKLE
Trigger: CTCAAGTTTCACAGTAACCAATGTGAATACTATTACTGTGGGTCATGAACTAAGTTCCTCTGTATCAACACTCTCTGAGTCATCTAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp GCCTGGATGACATATGGTGTTATGGTCTTTGTTTCAGAAGAAGTTTaGTTCTTTGTTATTGAAGTCATCATCTCTGGAGCACTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: AWMTYGVMVFVSEEV*FFVIEVIISGALVE
Trigger: CTCAACAAGTGCTCCAGAGATGATGACTTCAATAACAAAGAATCAAACTTCTTCTGAAACAAAGACCATAACACCATATGTCATCCAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp AGGGTTCTGCCAGCTCTAATGGATTCTGAAACAGAAAATTTGGGTTaGGGTATAGAACTGCTGACTTCTGTAATTATTTCTGAGTTAACA +
Preference number: 5 (lower is better)
Translates to: RVLPALMDSETENLG*GIELLTSVIISELT
Trigger: TGTTAACTCAGAAATAATTACAGAAGTCAGCAGTTCTATACCCCAACCCAAATTTTCTGTTTCAGAATCCATTAGAGCTGGCAGAACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GAGATTATTGTAGATACAGTCCCTGAAGTGCTTTCTTCTCCAGGATaGGTAATGAATGATGTTATAGCCTCTGTTTCAGAAGAATTTGGA +
Preference number: 5 (lower is better)
Translates to: EIIVDTVPEVLSSPG*VMNDVIASVSEEFG
Trigger: TCCAAATTCTTCTGAAACAGAGGCTATAACATCATTCATTACCCATCCTGGAGAAGAAAGCACTTCAGGGACTGTATCTACAATAATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp GTCTGTAGTTTAGAAGGATTTGCAGATTTTGAGGTTTCCACCTCTTaGTTATTAGGTGATATTGTTGTAGTTAACACCCTTGAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: VCSLEGFADFEVSTS*LLGDIVVVNTLEVA
Trigger: AGCCACTTCAAGGGTGTTAACTACAACAATATCACCTAATAATCAAGAGGTGGAAACCTCAAAATCTGCAAATCCTTCTAAACTACAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp GTATGTGGTTCAGAAGGAATAACAGTTGGTGAGATCATCATTTGTTaGACACTAGTTGAAGTGGTGATAGATAAGACGTCTGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: VCGSEGITVGEIIIC*TLVEVVIDKTSEMV
Trigger: AACCATTTCAGACGTCTTATCTATCACCACTTCAACTAGTGTTCAACAAATGATGATCTCACCAACTGTTATTCCTTCTGAACCACATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp CATTCCAGTGGAGATTTCTTCTGCTTTGATTACCTGGTTAGTGATTaGATAGGAAATGCTGTTATTTGTAGATTCTGTTCTGGATACAAG +
Preference number: 5 (lower is better)
Translates to: HSSGDFFCFDYLVSD*IGNAVICRFCSGYK
Trigger: CTTGTATCCAGAACAGAATCTACAAATAACAGCATTTCCTATCCAATCACTAACCAGGTAATCAAAGCAGAAGAAATCTCCACTGGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp CCCAGCATGAGAGATAAGAGAAATTGTATTATATGGCTCAGAAGGTaGATGAGTCAGAATTGGTTTAGATGTTCCTATATCTTCCTTAGA +
Preference number: 5 (lower is better)
Translates to: PSMRDKRNCIIWLRR*MSQNWFRCSYIFLR
Trigger: TCTAAGGAAGATATAGGAACATCTAAACCAATTCTGACTCATTCACCTTCTGAGCCATATAATACAATTTCTCTTATCTCTCATGCTGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 90 bp GTCAAATGGGAAAATGAATCAGTATTAGATCTTGTTGTTTCTAAATaGTTAGGCAATGATGTGAGTATAGTAGTCACCCATACAGAGGGA +
Preference number: 5 (lower is better)
Translates to: VKWENESVLDLVVSK*LGNDVSIVVTHTEG
Trigger: TCCCTCTGTATGGGTGACTACTATACTCACATCATTGCCTAACCATTTAGAAACAACAAGATCTAATACTGATTCATTTTCCCATTTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 90 bp GATACTGCTTTATTTACAGAAGTATCCTTAATTGAAGTCACTGAATaGCTTTGTATACCAGAGCTAGAGACCAGTGATGGCATATTTTCT +
Preference number: 5 (lower is better)
Translates to: DTALFTEVSLIEVTE*LCIPELETSDGIFS
Trigger: AGAAAATATGCCATCACTGGTCTCTAGCTCTGGTATACAAAGTCATTCAGTGACTTCAATTAAGGATACTTCTGTAAATAAAGCAGTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp TGGCTACTCTACAGCCTGTGTATAGGGGGCCAAGACTaGTCCTCTGAAACAAAGGGCCGAGCAGGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: WLLYSLCIGGQD*SSETKGRAGAA
Trigger: TGCAGCACCTGCTCGGCCCTTTGTTTCAGAGGAGCAGTCTTGGCCCCCTATACACAGGCTGTAGAGTAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp CTACAGCCTGTGTATAGGGGGCCAAGACTGCTCCTCTaGAACAAAGGGCCGAGCAGGTGCTGCATGAGTGTA +
Preference number: 6 (lower is better)
Translates to: LQPVYRGPRLLL*NKGPSRCCMSV
Trigger: TACACTCATGCAGCACCTGCTCGGCCCTTTGTTTCAGAGGAGCAGTCTTGGCCCCCTATACACAGGCTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp CGTCTACTCCTGTGGCAGTCCCATTGTGCTCAAGCCTaGGCAAGATCAGTCTGCATCCAGAGTATAAGGGGC +
Preference number: 6 (lower is better)
Translates to: RLLLWQSHCAQA*ARSVCIQSIRG
Trigger: GCCCCTTATACTCTGGATGCAGACTGATCTTGCTCAGGCTTGAGCACAATGGGACTGCCACAGGAGTAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp GGGAAGCATGAACAGTGTTGGAGCTTGACTGAGAGGTaGTGCTCCAGCTTGGAACGTAAACAGTCACAGGGC +
Preference number: 6 (lower is better)
Translates to: GKHEQCWSLTER*CSSLERKQSQG
Trigger: GCCCTGTGACTGTTTACGTTCCAAGCTGGAGCAGCACCTCTCAGTCAAGCTCCAACACTGTTCATGCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp GTACAGATGGCGTCTACTCCTGTGGCAGTCCCATTGTaGTCAAGCCTGAGCAAGATCAGTCTGCATCCAGAG +
Preference number: 6 (lower is better)
Translates to: VQMASTPVAVPL*SSLSKISLHPE
Trigger: CTCTGGATGCAGACTGATCTTGCTCAGGCTTGAGCACAATGGGACTGCCACAGGAGTAGACGCCATCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp GCCAGAGAACCCTTGCCCAGGCCTGCAGTGTCTCCATaGACAGCTCCATTAGATATGTCTGTGTGGTATTGC +
Preference number: 6 (lower is better)
Translates to: AREPLPRPAVSP*TAPLDMSVWYC
Trigger: GCAATACCACACAGACATATCTAATGGAGCTGTCCATGGAGACACTGCAGGCCTGGGCAAGGGTTCTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp CAAAGATGTTGTTGGGGAGGGCAAGATAGTGGTGGCTaGCTCTGGAGTTGTAGGAGGTACATCTGGACCAGG +
Preference number: 6 (lower is better)
Translates to: QRCCWGGQDSGG*LWSCRRYIWTR
Trigger: CCTGGTCCAGATGTACCTCCTACAACTCCAGAGCCAGCCACCACTATCTTGCCCTCCCCAACAACATCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp TCAGGAGGGGTGACCATCAAGGCAGGGGTCTCTAGTTaGCCTGGAGAAGCATGCAGAGTTGAAGACACTGAA +
Preference number: 6 (lower is better)
Translates to: SGGVTIKAGVSS*PGEACRVEDTE
Trigger: TTCAGTGTCTTCAACTCTGCATGCTTCTCCAGGTCAACTAGAGACCCCTGCCTTGATGGTCACCCCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp CTTCACAAGGTTGGGATCCAGATGAGAGGAGAACAGTaGCTCAAGAGTGACCACTGTGGAGCCAGACGTCAT +
Preference number: 6 (lower is better)
Translates to: LHKVGIQMRGEQ*LKSDHCGARRH
Trigger: ATGACGTCTGGCTCCACAGTGGTCACTCTTGAGGCACTGTTCTCCTCTCATCTGGATCCCAACCTTGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp GAGATCGTTGGAGATAGATTCCCTGAAGCCCCTTCATaGCCAGTATGGGTGATCCATTGGGCTGGGGATTTG +
Preference number: 6 (lower is better)
Translates to: EIVGDRFPEAPS*PVWVIHWAGDL
Trigger: CAAATCCCCAGCCCAATGGATCACCCATACTGGGCATGAAGGGGCTTCAGGGAATCTATCTCCAACGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp TCCGGCTTGTGCCACATAACTGTGTTGGACTCTGGCTaGAAAGATGTTGTTGGGGAGGGCAAGATAGTGGTG +
Preference number: 6 (lower is better)
Translates to: SGLCHITVLDSG*KDVVGEGKIVV
Trigger: CACCACTATCTTGCCCTCCCCAACAACATCTTTGCAGCCAGAGTCCAACACAGTTATGTGGCACAAGCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp TCATGTCTATCACGTGCAGATCTTTCAACTGGTAGGTaGCACCCAGCCAGTGGGAGGAGGCATTCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: SCLSRADLSTGR*HPASGRRHSVS
Trigger: AGACACTGAATGCCTCCTCCCACTGGCTGGGTGCCACCTACCAGTTGAAAGATCTGCACGTGATAGACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp ACAGTTAGAGTGGATGTGCTTGTCTCAGTGCCAGTGTaGCCAGAGAGAGAGGCTGCTTCTTCAGAAGCACCA +
Preference number: 6 (lower is better)
Translates to: TVRVDVLVSVPV*PEREAASSEAP
Trigger: TGGTGCTTCTGAAGAAGCAGCCTCTCTCTCTGGCCACACTGGCACTGAGACAAGCACATCCACTCTAACTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TGTTGTTGGGGAGGGCAAGATAGTGGTGGCTGGCTCTaGAGTTGTAGGAGGTACATCTGGACCAGGTTCATT +
Preference number: 6 (lower is better)
Translates to: CCWGGQDSGGWL*SCRRYIWTRFI
Trigger: AATGAACCTGGTCCAGATGTACCTCCTACAACTCCAGAGCCAGCCACCACTATCTTGCCCTCCCCAACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp CATAACTGTGTTGGACTCTGGCTGCAAAGATGTTGTTaGGGAGGGCAAGATAGTGGTGGCTGGCTCTGGAGT +
Preference number: 6 (lower is better)
Translates to: HNCVGLWLQRCC*GGQDSGGWLWS
Trigger: ACTCCAGAGCCAGCCACCACTATCTTGCCCTCCCCAACAACATCTTTGCAGCCAGAGTCCAACACAGTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp CAGCTCCTGAGTGTCAAGCTCAGGATGGTCTGGGTTTaGGTGATAGGAGCAAATAGCATTCACCCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: QLLSVKLRMVWV*VIGANSIHPSG
Trigger: GCCACTGGGGTGAATGCTATTTGCTCCTATCACCAAAACCCAGACCATCCTGAGCTTGACACTCAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp GCCTCAAGAGTGACCACTGTGGAGCCAGACGTCATGTaGGTGACCAGGCAAGACTGGAAGACTTCTTTTAGC +
Preference number: 6 (lower is better)
Translates to: ASRVTTVEPDVM*VTRQDWKTSFS
Trigger: GCTAAAAGAAGTCTTCCAGTCTTGCCTGGTCACCAACATGACGTCTGGCTCCACAGTGGTCACTCTTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp ATCCCATTCTTCTCAGGCCTGAGGGAGGTCAGTCTGCAACTTGAGTaGAAGGAGTCATTTTGGAACAAGGGTCCCAGCAGGCGTTGTAGG +
Preference number: 6 (lower is better)
Translates to: IPFFSGLREVSLQLE*KESFWNKGPSRRCR
Trigger: CCTACAACGCCTGCTGGGACCCTTGTTCCAAAATGACTCCTTCAACTCAAGTTGCAGACTGACCTCCCTCAGGCCTGAGAAGAATGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp GTGCCCTGTGGTAGGTTCTGGATGCAAAGCTGTAGATGGAGAAGGTaGCATAGTGGTGGTTGGTTCAGGAGTTGTAGGAGGTTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: VPCGRFWMQSCRWRR*HSGGWFRSCRRFFW
Trigger: CCAGAAGAACCTCCTACAACTCCTGAACCAACCACCACTATGCAACCTTCTCCATCTACAGCTTTGCATCCAGAACCTACCACAGGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp TTGTGGGGTGTGGGGTGCTGGTCTTGGCAGAAAGTATaGGCCATGTTTCAGTCCTCTCTGAATCACCAGGTA +
Preference number: 6 (lower is better)
Translates to: LWGVGCWSWQKV*AMFQSSLNHQV
Trigger: TACCTGGTGATTCAGAGAGGACTGAAACATGGCTCATACTTTCTGCCAAGACCAGCACCCCACACCCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CATCAACTTCTGTGGCTGCTCTATGATCGTCAGACCTaGGTGAAGCCAATCTGCATCCAGAGTAGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: HQLLWLLYDRQT*VKPICIQSRVG
Trigger: CCCCACTCTACTCTGGATGCAGATTGGCTTCACTCAGGTCTGACGATCATAGAGCAGCCACAGAAGTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp AAGCATGAACAGTGTTGGAGCTTGACTGAGAGGTGCTaGTCCAGCTTGGAACGTAAACAGTCACAGGGCCTA +
Preference number: 6 (lower is better)
Translates to: KHEQCWSLTERC*SSLERKQSQGL
Trigger: TAGGCCCTGTGACTGTTTACGTTCCAAGCTGGAGCAGCACCTCTCAGTCAAGCTCCAACACTGTTCATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp TTCAGATGGTGCGCTCTAGCTGTGGTGGATTCTGGCTaGACAGATGTCAGTGTAAAAGGCAGGATGGTGGTA +
Preference number: 6 (lower is better)
Translates to: FRWCALAVVDSG*TDVSVKGRMVV
Trigger: TACCACCATCCTGCCTTTTACACTGACATCTGTGCAGCCAGAATCCACCACAGCTAGAGCGCACCATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp GGTTTCCGGCTTGTGCCACATAACTGTGTTGGACTCTaGCTGCAAAGATGTTGTTGGGGAGGGCAAGATAGT +
Preference number: 6 (lower is better)
Translates to: GFRLVPHNCVGL*LQRCCWGGQDS
Trigger: ACTATCTTGCCCTCCCCAACAACATCTTTGCAGCCAGAGTCCAACACAGTTATGTGGCACAAGCCGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp GTGCCCTGTGGTAGGTTCTGGATGCAAAGCTGTAGATaGAGAAGGTTGCATAGTGGTGGTTGGTTCAGGAGT +
Preference number: 6 (lower is better)
Translates to: VPCGRFWMQSCR*RRLHSGGWFRS
Trigger: ACTCCTGAACCAACCACCACTATGCAACCTTCTCCATCTACAGCTTTGCATCCAGAACCTACCACAGGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp ATTGTGAAGGTTTCCGGCTTGTGCCACATAACTGTGTaGGACTCTGGCTGCAAAGATGTTGTTGGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: IVKVSGLCHITV*DSGCKDVVGEG
Trigger: GCCCTCCCCAACAACATCTTTGCAGCCAGAGTCCAACACAGTTATGTGGCACAAGCCGGAAACCTTCACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp AAGCATGAACAGTGTTGGAGCTTGACTGAGAGGTGCTGCTCCAGCTaGGAACGTAAACAGTCACAGGGCCTAAGCTTGTGTACGAATCTG +
Preference number: 6 (lower is better)
Translates to: KHEQCWSLTERCCSS*ERKQSQGLSLCTNL
Trigger: CAGATTCGTACACAAGCTTAGGCCCTGTGACTGTTTACGTTCCAAGCTGGAGCAGCACCTCTCAGTCAAGCTCCAACACTGTTCATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TTAACACCCTTGAAGTGGCTTCTGTTCCAGGATGGGTaGTCCATGAGGTGGTCACTGATTGACCTTGGGTTG +
Preference number: 6 (lower is better)
Translates to: LTPLKWLLFQDG*SMRWSLIDLGL
Trigger: CAACCCAAGGTCAATCAGTGACCACCTCATGGATCACCCATCCTGGAACAGAAGCCACTTCAAGGGTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp ATAGATTCCCTGAAGCCCCTTCATGCCCAGTATGGGTaGTCCATTGGGCTGGGGATTTGGATTGACTTGAAG +
Preference number: 6 (lower is better)
Translates to: IDSLKPLHAQYG*SIGLGIWIDLK
Trigger: CTTCAAGTCAATCCAAATCCCCAGCCCAATGGATCACCCATACTGGGCATGAAGGGGCTTCAGGGAATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp ATTCTTCTCAGGCCTGAGGGAGGTCAGTCTGCAACTTaGGTTGAAGGAGTCATTTTGGAACAAGGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: ILLRPEGGQSAT*VEGVILEQGSQ
Trigger: CTGGGACCCTTGTTCCAAAATGACTCCTTCAACTCAAGTTGCAGACTGACCTCCCTCAGGCCTGAGAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp GACTATGCTCCTCCAGTGTGTAGTTTCCCAGCTGGGTaGCTCCATGGCTCAGATGACTCAGTTCTGAGTATA +
Preference number: 6 (lower is better)
Translates to: DYAPPVCSFPAG*LHGSDDSVLSI
Trigger: TATACTCAGAACTGAGTCATCTGAGCCATGGAGTCACCCAGCTGGGAAACTACACACTGGAGGAGCATAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp AGGGTAGTGAGTGCAGACAGCATCTACTCCTGTGCCTaGACCATCATTTTCAGGTCTGAGCAAGGAGAGTTT +
Preference number: 6 (lower is better)
Translates to: RVVSADSIYSCA*TIIFRSEQGEF
Trigger: AAACTCTCCTTGCTCAGACCTGAAAATGATGGTGCAGGCACAGGAGTAGATGCTGTCTGCACTCACTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp CAGAAACAGAAGAGGGCGTACTGTATCTGTCTGCATTaGCAGAAACTGGAGAATGTGAGGGTGCCTCATCTG +
Preference number: 6 (lower is better)
Translates to: QKQKRAYCICLH*QKLENVRVPHL
Trigger: CAGATGAGGCACCCTCACATTCTCCAGTTTCTGCCAATGCAGACAGATACAGTACGCCCTCTTCTGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GCATTCCTTCAGAAACAGTGGCCATCACTGAAGGCCTaGAGGTGGTGGACAGAATCTGTTGTGTATAACCGT +
Preference number: 6 (lower is better)
Translates to: AFLQKQWPSLKA*RWWTESVVYNR
Trigger: ACGGTTATACACAACAGATTCTGTCCACCACCTCCAGGCCTTCAGTGATGGCCACTGTTTCTGAAGGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp AACTTGGCTGATCCCGGGACCCACATGTCATTCGTGTaGGGTAGGTTAGTGATAGTGAAGTTAAGAGTGCAC +
Preference number: 6 (lower is better)
Translates to: NLADPGTHMSFV*GRLVIVKLRVH
Trigger: GTGCACTCTTAACTTCACTATCACTAACCTACCCCACACGAATGACATGTGGGTCCCGGGATCAGCCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp AGTGGTGGCTGGCTCTGGAGTTGTAGGAGGTACATCTaGACCAGGTTCATTGTAGCCATTGATGAAAAGGCT +
Preference number: 6 (lower is better)
Translates to: SGGWLWSCRRYI*TRFIVAIDEKA
Trigger: AGCCTTTTCATCAATGGCTACAATGAACCTGGTCCAGATGTACCTCCTACAACTCCAGAGCCAGCCACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp GAGGTCAGTCTGCAACTTGAGTTGAAGGAGTCATTTTaGAACAAGGGTCCCAGCAGGCGTTGTAGGACATTC +
Preference number: 6 (lower is better)
Translates to: EVSLQLELKESF*NKGPSRRCRTF
Trigger: GAATGTCCTACAACGCCTGCTGGGACCCTTGTTCCAAAATGACTCCTTCAACTCAAGTTGCAGACTGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp GCAGAAACAGAAGAGGGCGTACTGTATCTGTCTGCATaGGCAGAAACTGGAGAATGTGAGGGTGCCTCATCT +
Preference number: 6 (lower is better)
Translates to: AETEEGVLYLSA*AETGECEGASS
Trigger: AGATGAGGCACCCTCACATTCTCCAGTTTCTGCCAATGCAGACAGATACAGTACGCCCTCTTCTGTTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp ACCCTGTATGTCCATTCCAGGATGTGCAGGGTCATTTaGGTAGGTGCAGGTGGTAACCACACCTGTGAACAT +
Preference number: 6 (lower is better)
Translates to: TLYVHSRMCRVI*VGAGGNHTCEH
Trigger: ATGTTCACAGGTGTGGTTACCACCTGCACCTACCAAAATGACCCTGCACATCCTGGAATGGACATACAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp TTCTCAGGCCTTAGGGAGGTCAGTCTACAGCTTGCGTaGAAGGAGTTATTCTGGAACAAGGGTCTAAGCAGG +
Preference number: 6 (lower is better)
Translates to: FSGLREVSLQLA*KELFWNKGLSR
Trigger: CCTGCTTAGACCCTTGTTCCAGAATAACTCCTTCAACGCAAGCTGTAGACTGACCTCCCTAAGGCCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp ACAATGGAGGCAGAAACAGAAGAGGGCGTACTGTATCTGTCTGCATaGGCAGAAACTGGAGAATGTGAGGGTGCCTCATCTGGAGTTCTT +
Preference number: 6 (lower is better)
Translates to: TMEAETEEGVLYLSA*AETGECEGASSGVL
Trigger: AAGAACTCCAGATGAGGCACCCTCACATTCTCCAGTTTCTGCCAATGCAGACAGATACAGTACGCCCTCTTCTGTTTCTGCCTCCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp TGGACCAAGGGTCTAATCAGGTGCTGCAGTATCCTTTCAGTGGAATaGAACATGGCTGAGCCACTACTCATGTCTGTTGAGTATGGGAGG +
Preference number: 6 (lower is better)
Translates to: WTKGLIRCCSILSVE*NMAEPLLMSVEYGR
Trigger: CCTCCCATACTCAACAGACATGAGTAGTGGCTCAGCCATGTTCAATTCCACTGAAAGGATACTGCAGCACCTGATTAGACCCTTGGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp TGGATAGAGTCCCATGGGTCTGCTTTTCATCTCTTCTaGCTCTGCACTGACAGTGGAGGCAGGGATACTAAT +
Preference number: 6 (lower is better)
Translates to: WIESHGSAFHLF*LCTDSGGRDTN
Trigger: ATTAGTATCCCTGCCTCCACTGTCAGTGCAGAGTCAGAAGAGATGAAAAGCAGACCCATGGGACTCTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GTTCCAGGATGGGTGATCCATGAGGTGGTCACTGATTaGCCTTGGGTTGGGTTTCTTGTATGGATTCTTCTC +
Preference number: 6 (lower is better)
Translates to: VPGWVIHEVVTD*PWVGFLVWILL
Trigger: GAGAAGAATCCATACAAGAAACCCAACCCAAGGTCAATCAGTGACCACCTCATGGATCACCCATCCTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GATGGTGTCACTTCTGTTATCCTGGGAGAGACATCCTaGGTAGACACAGATAAACTGGGCTGTTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: DGVTSVILGETS*VDTDKLGCSPA
Trigger: TGCTGGAGAACAGCCCAGTTTATCTGTGTCTACTCAGGATGTCTCTCCCAGGATAACAGAAGTGACACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CCAGTATGGGTGATCCATTGGGCTGGGGATTTGGATTaGCTTGAAGAAACTGGCAGAGTGGAAGGCAATGAA +
Preference number: 6 (lower is better)
Translates to: PVWVIHWAGDLD*LEETGRVEGNE
Trigger: TTCATTGCCTTCCACTCTGCCAGTTTCTTCAAGTCAATCCAAATCCCCAGCCCAATGGATCACCCATACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CCAGAATGGATGACCCACAAGGCTGTGGTCTCTCTTTaGTCTGCAGGAACAGACAGAGTTGGAGCAGTTTTA +
Preference number: 6 (lower is better)
Translates to: PEWMTHKAVVSL*SAGTDRVGAVL
Trigger: TAAAACTGCTCCAACTCTGTCTGTTCCTGCAGATCAAAGAGAGACCACAGCCTTGTGGGTCATCCATTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TGGGGCTGGTTACTGCAGTCTGGTGTGTGTAACCATTaGCATAGAGACTATTCTGGTCAAGGCTATAGGGAC +
Preference number: 6 (lower is better)
Translates to: WGWLLQSGVCNH*HRDYSGQGYRD
Trigger: GTCCCTATAGCCTTGACCAGAATAGTCTCTATGTCAATGGTTACACACACCAGACTGCAGTAACCAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp CAGCTGGGTGATTCCATAGGTAAGATGACTCAGCTCTaGGTACAGTTCCTGGGTGTCAATCCCAGAATTTGC +
Preference number: 6 (lower is better)
Translates to: QLGDSIGKMTQL*VQFLGVNPRIC
Trigger: GCAAATTCTGGGATTGACACCCAGGAACTGTACTCAGAGCTGAGTCATCTTACCTATGGAATCACCCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp GGTGAAGTTGATAGTAAAATGCTCCAGGACAGGCCCTaGTGTTGGAGATGTGATAGACTGGATCTGGTGTGT +
Preference number: 6 (lower is better)
Translates to: GEVDSKMLQDRP*CWRCDRLDLVC
Trigger: ACACACCAGATCCAGTCTATCACATCTCCAACAGCAGGGCCTGTCCTGGAGCATTTTACTATCAACTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp GTAGGTTCTGGATGCAAAGCTGTAGATGGAGAAGGTTaGATAGTGGTGGTTGGTTCAGGAGTTGTAGGAGGT +
Preference number: 6 (lower is better)
Translates to: VGSGCKAVDGEG*IVVVGSGVVGG
Trigger: ACCTCCTACAACTCCTGAACCAACCACCACTATGCAACCTTCTCCATCTACAGCTTTGCATCCAGAACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp TCTCAGAAGTCACAGCTGAAATGCCTGTTGGGTTACTaGTTGTGGCAAAGAAGGTCATCCCTCTGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: SQKSQLKCLLGY*LWQRRSSLWEK
Trigger: TTTCTCCCAGAGGGATGACCTTCTTTGCCACAACCAGTAACCCAACAGGCATTTCAGCTGTGACTTCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp ATGCCATCTTCCATTTCTGAAGGAGTAGTAATCCTCTaGAGGGATGAGCTGGCTGCAGTGTCAGTAGTAGTG +
Preference number: 6 (lower is better)
Translates to: MPSSISEGVVIL*RDELAAVSVVV
Trigger: CACTACTACTGACACTGCAGCCAGCTCATCCCTCCAGAGGATTACTACTCCTTCAGAAATGGAAGATGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp CTAGTTACAGTCTCTGAAGTGCCTTCTCTTCCAGTATaGGTACTTGCTGGGGTTGTGGATTCTGCTTCACCT +
Preference number: 6 (lower is better)
Translates to: LVTVSEVPSLPV*VLAGVVDSASP
Trigger: AGGTGAAGCAGAATCCACAACCCCAGCAAGTACCCATACTGGAAGAGAAGGCACTTCAGAGACTGTAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GTGAATGACCCATGTTGCTTGAGTATCTGGCTGACCTaGGGATACAGGCAGAGTAGGAATCACTGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: VNDPCCLSIWLT*GYRQSRNHCVS
Trigger: AGAAACACAGTGATTCCTACTCTGCCTGTATCCCCAGGTCAGCCAGATACTCAAGCAACATGGGTCATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GGAATATCAGTTGGTGAGGCCTTCGGTTCTGAAACATaGGGTGAAGTGGAGGTAGGTAGAACTCTAGAGGTT +
Preference number: 6 (lower is better)
Translates to: GISVGEAFGSET*GEVEVGRTLEV
Trigger: AACCTCTAGAGTTCTACCTACCTCCACTTCACCCCATGTTTCAGAACCGAAGGCCTCACCAACTGATATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GTTGATGGTGAAAGGCACCAGAGAAGAGAGTGGCATTaGAGATGTGATGGACTGGATCTGGTGTGTATAACC +
Preference number: 6 (lower is better)
Translates to: VDGERHQRREWH*RCDGLDLVCIT
Trigger: GGTTATACACACCAGATCCAGTCCATCACATCTCCAATGCCACTCTCTTCTCTGGTGCCTTTCACCATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TGTATACAGCTCCTGAGTGTCAAGCTCAGGATGGTCTaGGTTTTGGTGATAGGAGCAAATAGCATTCACCCC +
Preference number: 6 (lower is better)
Translates to: CIQLLSVKLRMV*VLVIGANSIHP
Trigger: GGGGTGAATGCTATTTGCTCCTATCACCAAAACCCAGACCATCCTGAGCTTGACACTCAGGAGCTGTATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp TCATGCCTTCCACTGATCCGAGTAAGGAAACAGAGGTaGTCTGTGGGATTTTGGAGAACTGGGTACTGTTGG +
Preference number: 6 (lower is better)
Translates to: SCLPLIRVRKQR*SVGFWRTGYCW
Trigger: CCAACAGTACCCAGTTCTCCAAAATCCCACAGACAACCTCTGTTTCCTTACTCGGATCAGTGGAAGGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp AATGGGAACTCTCAGAAGTCACAGCTGAAATGCCTGTaGGGTTACTGGTTGTGGCAAAGAAGGTCATCCCTC +
Preference number: 6 (lower is better)
Translates to: NGNSQKSQLKCL*GYWLWQRRSSL
Trigger: GAGGGATGACCTTCTTTGCCACAACCAGTAACCCAACAGGCATTTCAGCTGTGACTTCTGAGAGTTCCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp ATGCCAAATCTGGTATGGCAGAGGAAACAGCTGCTGTaGAAAGGGTTGACCTGTCTTTTCCTCTGGAACTGG +
Preference number: 6 (lower is better)
Translates to: MPNLVWQRKQLL*KGLTCLFLWNW
Trigger: CCAGTTCCAGAGGAAAAGACAGGTCAACCCTTTCAACAGCAGCTGTTTCCTCTGCCATACCAGATTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp ATGGGTGGGCCAAGGTGTTGCGGATTCTGTTTGTCCTaGGGAAATATCTGGAGTCGAAAGCATTGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: MGGPRCCGFCLS*GNIWSRKHCKA
Trigger: AGCTTTGCAATGCTTTCGACTCCAGATATTTCCCAAGGACAAACAGAATCCGCAACACCTTGGCCCACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TCCAGAATGGATGACCCACAAGGCTGTGGTCTCTCTTaGATCTGCAGGAACAGACAGAGTTGGAGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: SRMDDPQGCGLS*ICRNRQSWSSF
Trigger: AAAACTGCTCCAACTCTGTCTGTTCCTGCAGATCAAAGAGAGACCACAGCCTTGTGGGTCATCCATTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TACAGACTGTCCTTTTCTAAAGTGAAGGATCCTAGCTaGGTGACACCCTGGGTGTTATGGCTCAGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: YRLSFSKVKDPS*VTPWVLWLSSQ
Trigger: CTGGGAACTGAGCCATAACACCCAGGGTGTCACCAAGCTAGGATCCTTCACTTTAGAAAAGGACAGTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000207509.2
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp GGAACCAGCCCAGAACCTGCTGTAGGACTGGGAGAGTaGTTTATCATCCCCATAGAAGCAATGGTCATCATT +
Preference number: 6 (lower is better)
Translates to: GTSPEPAVGLGE*FIIPIEAMVII
Trigger: AATGATGACCATTGCTTCTATGGGGATGATAAACAACTCTCCCAGTCCTACAGCAGGTTCTGGGCTGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp GTTAGATCTTTATGGTTAGCAGATGATGTAGAAGCCAGAGAACCCTaGCCCAGGCCTGCAGTGTCTCCATGGACAGCTCCATTAGATATG +
Preference number: 6 (lower is better)
Translates to: VRSLWLADDVEAREP*PRPAVSPWTAPLDM
Trigger: CATATCTAATGGAGCTGTCCATGGAGACACTGCAGGCCTGGGCAAGGGTTCTCTGGCTTCTACATCATCTGCTAACCATAAAGATCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp CTTTGTATACAGCTCCTGAGTGTCAAGCTCAGGATGGTCTGGGTTTaGGTGATAGGAGCAAATAGCATTCACCCCAGTGGCTGTTCCATT +
Preference number: 6 (lower is better)
Translates to: LCIQLLSVKLRMVWV*VIGANSIHPSGCSI
Trigger: AATGGAACAGCCACTGGGGTGAATGCTATTTGCTCCTATCACCAAAACCCAGACCATCCTGAGCTTGACACTCAGGAGCTGTATACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp ATGTATTCATCTGTGACATTTGGGAAGCATGAACAGTGTTGGAGCTaGACTGAGAGGTGCTGCTCCAGCTTGGAACGTAAACAGTCACAG +
Preference number: 6 (lower is better)
Translates to: MYSSVTFGKHEQCWS*TERCCSSLERKQSQ
Trigger: CTGTGACTGTTTACGTTCCAAGCTGGAGCAGCACCTCTCAGTCAAGCTCCAACACTGTTCATGCTTCCCAAATGTCACAGATGAATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp CCATTGATGTACAGACTGTCCTTTTCTAAAGTGAAGGATCCTAGCTaGGTGACACCCTGGGTGTTATGGCTCAGTTCCCAGTACATCTTC +
Preference number: 6 (lower is better)
Translates to: PLMYRLSFSKVKDPS*VTPWVLWLSSQYIF
Trigger: GAAGATGTACTGGGAACTGAGCCATAACACCCAGGGTGTCACCAAGCTAGGATCCTTCACTTTAGAAAAGGACAGTCTGTACATCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207509.2
ENSMUST00000208663.2
CDS TCA 72 bp GTGGAAATGTATGTGTCCCACTGGAGTGGGTACCCTTaGCAGAGACAGTGCTTGATGAATCTGGATAAGTCA +
Preference number: 6 (lower is better)
Translates to: VEMYVSHWSGYP*QRQCLMNLDKS
Trigger: TGACTTATCCAGATTCATCAAGCACTGTCTCTGTCAAGGGTACCCACTCCAGTGGGACACATACATTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GGATGCACTGGGATGTCCCTCAGCATTTGTGTCCAATaGTTCTATGGGTTGTGGTTCAGAAGGAGAGTGTTT +
Preference number: 6 (lower is better)
Translates to: GCTGMSLSICVQ*FYGLWFRRRVF
Trigger: AAACACTCTCCTTCTGAACCACAACCCATAGAATCATTGGACACAAATGCTGAGGGACATCCCAGTGCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GATGGTGTCACTTTCATTATACCTGGAGAGCCACCCTaGGAAGGCACAGATAAACTTGTGTCTTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: DGVTFIIPGEPP*EGTDKLVSSPA
Trigger: TGCTGGAGAAGACACAAGTTTATCTGTGCCTTCTCAGGGTGGCTCTCCAGGTATAATGAAAGTGACACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CTTTCCTCCATGGTGGATTTCCATGGAATCCACCAGTaGTTCCATGATCTGTGTATTAGAGGCAGAGTGCCT +
Preference number: 6 (lower is better)
Translates to: LSSMVDFHGIHQ*FHDLCIRGRVP
Trigger: AGGCACTCTGCCTCTAATACACAGATCATGGAATCACTGGTGGATTCCATGGAAATCCACCATGGAGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GGTGATAGTGAAGTTGAAGGTAAATATCTCCAAGGGTaGTTTGCTGGGGCTGGTTACTGCAGTCTGGTGTGT +
Preference number: 6 (lower is better)
Translates to: GDSEVEGKYLQG*FAGAGYCSLVC
Trigger: ACACACCAGACTGCAGTAACCAGCCCCAGCAAATCACCCTTGGAGATATTTACCTTCAACTTCACTATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp CTCCAGGACTCATGGAGTAAGAGTGGAAGTTACAGATaGCATCAACTTCTGTGGCTGCTCTATGATCGTCAG +
Preference number: 6 (lower is better)
Translates to: LQDSWSKSGSYR*HQLLWLLYDRQ
Trigger: CTGACGATCATAGAGCAGCCACAGAAGTTGATGTCATCTGTAACTTCCACTCTTACTCCATGAGTCCTGGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp TGGGGGCCCAGTGGGCATTCCAGTGGAGATTTCTTCTaGTTTGATTACCTGGTTAGTGATTGGATAGGAAAT +
Preference number: 6 (lower is better)
Translates to: WGPSGHSSGDFF*FDYLVSDWIGN
Trigger: ATTTCCTATCCAATCACTAACCAGGTAATCAAAGCAGAAGAAATCTCCACTGGAATGCCCACTGGGCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp ATGGATGACCCACAAGGCTGTGGTCTCTCTTTGATCTaGAGGAACAGACAGAGTTGGAGCAGTTTTATGTGT +
Preference number: 6 (lower is better)
Translates to: MDDPQGCGLSLI*RNRQSWSSFMC
Trigger: ACACATAAAACTGCTCCAACTCTGTCTGTTCCTGCAGATCAAAGAGAGACCACAGCCTTGTGGGTCATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp AGTGAAGTTGATGGTAAAAGGAACCAGCCCAGAACCTaGTGTAGGACTGGGAGAGTTGTTTATCATCCCCAT +
Preference number: 6 (lower is better)
Translates to: SEVDGKRNQPRT*CRTGRVVYHPH
Trigger: ATGGGGATGATAAACAACTCTCCCAGTCCTACAGCAGGTTCTGGGCTGGTTCCTTTTACCATCAACTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp TTCAAATGGTACCCCACAGCTGTGGTGGATTCTGTTTaGACAAGTATTGATGGGGAAGGCAGCATAGTAGTG +
Preference number: 6 (lower is better)
Translates to: FKWYPTAVVDSV*TSIDGEGSIVV
Trigger: CACTACTATGCTGCCTTCCCCATCAATACTTGTGCAAACAGAATCCACCACAGCTGTGGGGTACCATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp AGAATCTTTAGATGGTGCCCTGTGGTAGGTTCTGGATaGAAAGCTGTAGATGGAGAAGGTTGCATAGTGGTG +
Preference number: 6 (lower is better)
Translates to: RIFRWCPVVGSG*KAVDGEGCIVV
Trigger: CACCACTATGCAACCTTCTCCATCTACAGCTTTGCATCCAGAACCTACCACAGGGCACCATCTAAAGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp AGGGATTCATTCTGGACCAAGGGTCTAATCAGGTGCTaGAGTATCCTTTCAGTGGAATTGAACATGGCTGAG +
Preference number: 6 (lower is better)
Translates to: RDSFWTKGLIRC*SILSVELNMAE
Trigger: CTCAGCCATGTTCAATTCCACTGAAAGGATACTGCAGCACCTGATTAGACCCTTGGTCCAGAATGAATCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp CTGACTAGTGGTAATTTCTTTGCTGATTATGGAGTTTaGGGGCCCAGTGGGCATTCCAGTGGAGATTTCTTC +
Preference number: 6 (lower is better)
Translates to: LTSGNFFADYGV*GPSGHSSGDFF
Trigger: GAAGAAATCTCCACTGGAATGCCCACTGGGCCCCCAAACTCCATAATCAGCAAAGAAATTACCACTAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TTGGGAGGATCCATGGCTTCTGGATGTGGAAATGTTTaGACCCTACTGGAGTTAGTGACATTGATTGAGGCA +
Preference number: 6 (lower is better)
Translates to: LGGSMASGCGNV*TLLELVTLIEA
Trigger: TGCCTCAATCAATGTCACTAACTCCAGTAGGGTCCAAACATTTCCACATCCAGAAGCCATGGATCCTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp AAGGAAACAGAGGTTGTCTGTGGGATTTTGGAGAACTaGGTACTGTTGGAGCTTGGTATTGAAGGGGTCACT +
Preference number: 6 (lower is better)
Translates to: KETEVVCGILEN*VLLELGIEGVT
Trigger: AGTGACCCCTTCAATACCAAGCTCCAACAGTACCCAGTTCTCCAAAATCCCACAGACAACCTCTGTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp AGGTGTTGCGGATTCTGTTTGTCCTTGGGAAATATCTaGAGTCGAAAGCATTGCAAAGCTTTCTGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: RCCGFCLSLGNI*SRKHCKAFCAR
Trigger: CCTGGCACAGAAAGCTTTGCAATGCTTTCGACTCCAGATATTTCCCAAGGACAAACAGAATCCGCAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GTTGATAGTAAAATGCTCCAGGACAGGCCCTGCTGTTaGAGATGTGATAGACTGGATCTGGTGTGTATAACC +
Preference number: 6 (lower is better)
Translates to: VDSKMLQDRPCC*RCDRLDLVCIT
Trigger: GGTTATACACACCAGATCCAGTCTATCACATCTCCAACAGCAGGGCCTGTCCTGGAGCATTTTACTATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GAATCCAGTCTGCAACTGGAGTTGAAAGAACCATTATaGAGCAAGGGTTCCAGCAGATGCTTCAGAACAGTC +
Preference number: 6 (lower is better)
Translates to: ESSLQLELKEPL*SKGSSRCFRTV
Trigger: GACTGTTCTGAAGCATCTGCTGGAACCCTTGCTCCATAATGGTTCTTTCAACTCCAGTTGCAGACTGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp ACAGGAAGACTAGAGGACATAGTCAGAGTATATTCTTaGGAAGGGCTGGAAGGCTGTAAGCCTGTGGTTCCT +
Preference number: 6 (lower is better)
Translates to: TGRLEDIVRVYS*EGLEGCKPVVP
Trigger: AGGAACCACAGGCTTACAGCCTTCCAGCCCTTCCAAAGAATATACTCTGACTATGTCCTCTAGTCTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp CAAGATCCTCTCTGTGCTGTTGAATATTTCAGATCCTaGAGATGCCATGCCCTCTGTATGGTGCAGGTTGGT +
Preference number: 6 (lower is better)
Translates to: QDPLCAVEYFRS*RCHALCMVQVG
Trigger: ACCAACCTGCACCATACAGAGGGCATGGCATCTCAAGGATCTGAAATATTCAACAGCACAGAGAGGATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207509.2
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp TTGGAGATGGTGAAGTTGATTGTGAAGGTTTCCGGCTaGTGCCACATAACTGTGTTGGACTCTGGCTGCAAA +
Preference number: 6 (lower is better)
Translates to: LEMVKLIVKVSG*CHITVLDSGCK
Trigger: TTTGCAGCCAGAGTCCAACACAGTTATGTGGCACAAGCCGGAAACCTTCACAATCAACTTCACCATCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp GCTGAGCCACTGATCATGTCTACTGAATATGGAAGGTaGGAGATGGTGAAGTTGATTGTGAAGGTTTCCGGC +
Preference number: 6 (lower is better)
Translates to: AEPLIMSTEYGR*EMVKLIVKVSG
Trigger: GCCGGAAACCTTCACAATCAACTTCACCATCTCCAACCTTCCATATTCAGTAGACATGATCAGTGGCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp TTTTCAGGCCTGAGTGAATCCAGTCTGCAACTGGAGTaGAAAGAACCATTATGGAGCAAGGGTTCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: FSGLSESSLQLE*KEPLWSKGSSR
Trigger: TCTGCTGGAACCCTTGCTCCATAATGGTTCTTTCAACTCCAGTTGCAGACTGGATTCACTCAGGCCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp GGTCTAATCAGGTGCTGCAGTATCCTTTCAGTGGAATaGAACATGGCTGAGCCACTACTCATGTCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: GLIRCCSILSVE*NMAEPLLMSVE
Trigger: CTCAACAGACATGAGTAGTGGCTCAGCCATGTTCAATTCCACTGAAAGGATACTGCAGCACCTGATTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp GCTTCTGGATGTGGAAATGTTTGGACCCTACTGGAGTTAGTGACATaGATTGAGGCAGAGGTTGATGGGCTTTTAGAAGTCACCATGCTT +
Preference number: 6 (lower is better)
Translates to: ASGCGNVWTLLELVT*IEAEVDGLLEVTML
Trigger: AAGCATGGTGACTTCTAAAAGCCCATCAACCTCTGCCTCAATCAATGTCACTAACTCCAGTAGGGTCCAAACATTTCCACATCCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp ATGGTACCTTTCTCAGGGGTAGGTGTCCATGATGCTGAAGCAAGATaGTTGAAAGGAGCCCTGGATTCTGAATGTGGAAATGTATGTGTC +
Preference number: 6 (lower is better)
Translates to: MVPFSGVGVHDAEAR*LKGALDSECGNVCV
Trigger: GACACATACATTTCCACATTCAGAATCCAGGGCTCCTTTCAACAATCTTGCTTCAGCATCATGGACACCTACCCCTGAGAAAGGTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp GTAGATGTCTCTGTAATTGTGGGGGCTGGACTGAAACTCATGAAATaGTCTGACTCTGATGACATGGTTGACGTTTTTAGGGAGAGGGCA +
Preference number: 6 (lower is better)
Translates to: VDVSVIVGAGLKLMK*SDSDDMVDVFRERA
Trigger: TGCCCTCTCCCTAAAAACGTCAACCATGTCATCAGAGTCAGACAATTTCATGAGTTTCAGTCCAGCCCCCACAATTACAGAGACATCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp GTCTCAGAACTTGGCAAGTGGAGAGTGGATTCAAGAGGTGAAGGTTaGTTTGTTTGTAGGGATATGCTAGTGTCCCTCAATCCAGAAGTC +
Preference number: 6 (lower is better)
Translates to: VSELGKWRVDSRGEG*FVCRDMLVSLNPEV
Trigger: GACTTCTGGATTGAGGGACACTAGCATATCCCTACAAACAAACAAACCTTCACCTCTTGAATCCACTCTCCACTTGCCAAGTTCTGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp AGGGTTGACCTGTCTTTTCCTCTGGAACTGGTGGCTGTGGACACCTaGGAATCTAATTCAACTTGTGAAGCATTTTTGGTTGTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: RVDLSFPLELVAVDT*ESNSTCEAFLVVLA
Trigger: TGCCAAGACAACCAAAAATGCTTCACAAGTTGAATTAGATTCCAAGGTGTCCACAGCCACCAGTTCCAGAGGAAAAGACAGGTCAACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp TTGAATATGGCTGAGCCACTGATCATGTCTACTGAATATGGAAGGTaGGAGATGGTGAAGTTGATTGTGAAGGTTTCCGGCTTGTGCCAC +
Preference number: 6 (lower is better)
Translates to: LNMAEPLIMSTEYGR*EMVKLIVKVSGLCH
Trigger: GTGGCACAAGCCGGAAACCTTCACAATCAACTTCACCATCTCCAACCTTCCATATTCAGTAGACATGATCAGTGGCTCAGCCATATTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp TGGAGCAAGGGTTCCAGCAGATGCTTCAGAACAGTCTCAGTAGAGTaGAACACAGCTGAGCCATTGTTCATATGTGCTGAATATGGAAGA +
Preference number: 6 (lower is better)
Translates to: WSKGSSRCFRTVSVE*NTAEPLFICAEYGR
Trigger: TCTTCCATATTCAGCACATATGAACAATGGCTCAGCTGTGTTCAACTCTACTGAGACTGTTCTGAAGCATCTGCTGGAACCCTTGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp ACATTGATGTACAGACTGTCCTTTTCTAAAGTGAAGGATCCTAGCTaGGTGACACCCTGGGTGTTATGGCTCAGTTCCCAGTACATCTTC +
Preference number: 6 (lower is better)
Translates to: TLMYRLSFSKVKDPS*VTPWVLWLSSQYIF
Trigger: GAAGATGTACTGGGAACTGAGCCATAACACCCAGGGTGTCACCAAGCTAGGATCCTTCACTTTAGAAAAGGACAGTCTGTACATCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207857.2
CDS TCA 72 bp AATACCCATCCACAAAGACACTCTTCCTATCCAGTGTaGAGTTCAGCAACTGGGTACCATTGTGCGTCATTC +
Preference number: 6 (lower is better)
Translates to: NTHPQRHSSYPV*SSATGYHCASF
Trigger: GAATGACGCACAATGGTACCCAGTTGCTGAACTTCACACTGGATAGGAAGAGTGTCTTTGTGGATGGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp CTTTCTTGTGTTTGTCTTGGGTATTGGTCTGAGCACTaGAGTCATAGGTCCACTAGAGCTATGTGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: LSCVCLGYWSEH*SHRSTRAMWLL
Trigger: CAAGAGCCACATAGCTCTAGTGGACCTATGACTTCAGTGCTCAGACCAATACCCAAGACAAACACAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GAGGAAGCAGAGCTTGTCTGTGAAAATTCGGTAGCCTaGGAAGTCTCTTGGCTTGTATGTGTATTAGTGGTC +
Preference number: 6 (lower is better)
Translates to: EEAELVCENSVA*EVSWLVCVLVV
Trigger: GACCACTAATACACATACAAGCCAAGAGACTTCTCAGGCTACCGAATTTTCACAGACAAGCTCTGCTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GCTTCTCGTCAGGGTTCTGCCAGCTCTAATGGATTCTaGAACAGAAAATTTGGGTTGGGGTATAGAACTGCT +
Preference number: 6 (lower is better)
Translates to: ASRQGSASSNGF*NRKFGLGYRTA
Trigger: AGCAGTTCTATACCCCAACCCAAATTTTCTGTTTCAGAATCCATTAGAGCTGGCAGAACCCTGACGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CCCCAAAGTTGCTTCTTTTTCTGCATGAGTCACCAATaGGGCTGTGGACTCTATTTGACCTACAGAAACAGG +
Preference number: 6 (lower is better)
Translates to: PQSCFFFCMSHQ*GCGLYLTYRNR
Trigger: CCTGTTTCTGTAGGTCAAATAGAGTCCACAGCCTCATTGGTGACTCATGCAGAAAAAGAAGCAACTTTGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GGAAAAACTGGACTGTGTCCCAGCATGGGTAACCAGTaGTGTTATGGTGTGCACATTCGAAGAAGTATGGTT +
Preference number: 6 (lower is better)
Translates to: GKTGLCPSMGNQ*CYGVHIRRSMV
Trigger: AACCATACTTCTTCGAATGTGCACACCATAACATCACTGGTTACCCATGCTGGGACACAGTCCAGTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TCAGTATGGGTGTCTCCTGAGGCTGTGGTCTCCAATTaGCCTTGGGAAATATCCATAGTAGAAGTCACTGAA +
Preference number: 6 (lower is better)
Translates to: SVWVSPEAVVSN*PWEISIVEVTE
Trigger: TTCAGTGACTTCTACTATGGATATTTCCCAAGGTCAATTGGAGACCACAGCCTCAGGAGACACCCATACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CTGTTCCATGGTGTAATGGTCCCATTAGTTTCTGCTTaGCCTGGTGAAGCAGGCAAAGTTGAAGTCATTGCA +
Preference number: 6 (lower is better)
Translates to: LFHGVMVPLVSA*PGEAGKVEVIA
Trigger: TGCAATGACTTCAACTTTGCCTGCTTCACCAGGTCAAGCAGAAACTAATGGGACCATTACACCATGGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp AAGATCCTCTCTGTGCTGTTGAATATTTCAGATCCTTaGGATGCCATGCCCTCTGTATGGTGCAGGTTGGTT +
Preference number: 6 (lower is better)
Translates to: KILSVLLNISDP*DAMPSVWCRLV
Trigger: AACCAACCTGCACCATACAGAGGGCATGGCATCTCAAGGATCTGAAATATTCAACAGCACAGAGAGGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207509.2
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp GCCAAAGCAGTCTTTGTAGGATTCTTTCAGTGGCATTaGACTTCCATGATCCAGGGTGATTCATGCCCTCTT +
Preference number: 6 (lower is better)
Translates to: AKAVFVGFFQWH*TSMIQGDSCPL
Trigger: AAGAGGGCATGAATCACCCTGGATCATGGAAGTTCAATGCCACTGAAAGAATCCTACAAAGACTGCTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp AAGTTACAGATGACATCAACTTCTGTGGCTGCTCTATaGTCGTCAGACCTGAGTGAAGCCAATCTGCATCCA +
Preference number: 6 (lower is better)
Translates to: KLQMTSTSVAAL*SSDLSEANLHP
Trigger: TGGATGCAGATTGGCTTCACTCAGGTCTGACGATCATAGAGCAGCCACAGAAGTTGATGTCATCTGTAACTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp GGCTGTCTTTATCCAAGGAGTAAGGACCCAACTTGGTaGTTCCATGAGTCTGCCAGCTTAGGTCATAGAAAA +
Preference number: 6 (lower is better)
Translates to: GCLYPRSKDPTW*FHESASLGHRK
Trigger: TTTTCTATGACCTAAGCTGGCAGACTCATGGAATCACCAAGTTGGGTCCTTACTCCTTGGATAAAGACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp GGATCTGGTGTGTATAACATGGCCACTGCTCACCATTaGTGTAAAGGCTGTTCTTGTCTAAGGTATAAGGGC +
Preference number: 6 (lower is better)
Translates to: GSGVYNMATAHH*CKGCSCLRYKG
Trigger: GCCCTTATACCTTAGACAAGAACAGCCTTTACATCAATGGTGAGCAGTGGCCATGTTATACACACCAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207857.2
CDS GCA 72 bp GATGGAACTGAATTAACTAGGACAGTGCCTTGGGGATaGATTGCAGGACTATCAGTTTCTACTCTTGTTGCC +
Preference number: 6 (lower is better)
Translates to: DGTELTRTVPWG*IAGLSVSTLVA
Trigger: GGCAACAAGAGTAGAAACTGATAGTCCTGCAATGCATCCCCAAGGCACTGTCCTAGTTAATTCAGTTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp CCTCTCTGTGCTGTTGAATATTTCAGATCCTTGAGATaGCATGCCCTCTGTATGGTGCAGGTTGGTTATAGT +
Preference number: 6 (lower is better)
Translates to: PLCAVEYFRSLR*HALCMVQVGYS
Trigger: ACTATAACCAACCTGCACCATACAGAGGGCATGGCATCTCAAGGATCTGAAATATTCAACAGCACAGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000207509.2
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp AAAATTGATGGTGAAAGGTACCAGGACAGGGCTGGTTaGTGTTGGGGTAGAAGAAATGTTTGGCATTCCTTC +
Preference number: 6 (lower is better)
Translates to: KIDGERYQDRAG*CWGRRNVWHSF
Trigger: GAAGGAATGCCAAACATTTCTTCTACCCCAACAGCAACCAGCCCTGTCCTGGTACCTTTCACCATCAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp TCAGTGTCTTATTCAAGAAGACTTGCTTCACAAGGTTaGGATCCAGATGAGAGGAGAACAGTGCCTCAAGAG +
Preference number: 6 (lower is better)
Translates to: SVSYSRRLASQG*DPDERRTVPQE
Trigger: CTCTTGAGGCACTGTTCTCCTCTCATCTGGATCCCAACCTTGTGAAGCAAGTCTTCTTGAATAAGACACTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp GCGCATTTTCAATACTTCTTTTGGTTTGCTGGTATTTaGTGGTGCTTGGCTGGGCTATGTCTTGGGAATAGG +
Preference number: 6 (lower is better)
Translates to: AHFQYFFWFAGI*WCLAGLCLGNR
Trigger: CCTATTCCCAAGACATAGCCCAGCCAAGCACCACCAAATACCAGCAAACCAAAAGAAGTATTGAAAATGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp GTTACCATGTTTGATGTCACCACAGTATGTTCTCTGTaGCTGGTTGCAGTCTGTTCTGATTCTGTGGTGGTT +
Preference number: 6 (lower is better)
Translates to: VTMFDVTTVCSL*LVAVCSDSVVV
Trigger: AACCACCACAGAATCAGAACAGACTGCAACCAGCCACAGAGAACATACTGTGGTGACATCAAACATGGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GATTCTGAATGTGGAAATGTATGTGTCCCACTGGAGTaGGTACCCTTGACAGAGACAGTGCTTGATGAATCT +
Preference number: 6 (lower is better)
Translates to: DSECGNVCVPLE*VPLTETVLDES
Trigger: AGATTCATCAAGCACTGTCTCTGTCAAGGGTACCCACTCCAGTGGGACACATACATTTCCACATTCAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp ACAGATGTGGTGGTGTATTTGAATTCAGGTACAGAATaGCTGTCTCCCATGTTAGACCCTGATGTGACTGAG +
Preference number: 6 (lower is better)
Translates to: TDVVVYLNSGTE*LSPMLDPDVTE
Trigger: CTCAGTCACATCAGGGTCTAACATGGGAGACAGCCATTCTGTACCTGAATTCAAATACACCACCACATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TTGAAAGGGTTGACCTGTCTTTTCCTCTGGAACTGGTaGCTGTGGACACCTTGGAATCTAATTCAACTTGTG +
Preference number: 6 (lower is better)
Translates to: LKGLTCLFLWNW*LWTPWNLIQLV
Trigger: CACAAGTTGAATTAGATTCCAAGGTGTCCACAGCCACCAGTTCCAGAGGAAAAGACAGGTCAACCCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp CTGTTGAAAGGGTTGACCTGTCTTTTCCTCTGGAACTaGTGGCTGTGGACACCTTGGAATCTAATTCAACTT +
Preference number: 6 (lower is better)
Translates to: LLKGLTCLFLWN*WLWTPWNLIQL
Trigger: AAGTTGAATTAGATTCCAAGGTGTCCACAGCCACCAGTTCCAGAGGAAAAGACAGGTCAACCCTTTCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp ATTCAGTCCCTGAAGTGTTTTCTCTTCCAGTATGTGTaGCCCATGTGGTTGTGGATACTGCTTGGTTTACAG +
Preference number: 6 (lower is better)
Translates to: IQSLKCFLFQYV*PMWLWILLGLQ
Trigger: CTGTAAACCAAGCAGTATCCACAACCACATGGGCCACACATACTGGAAGAGAAAACACTTCAGGGACTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TGTGGTCTCTCTTTGATCTGCAGGAACAGACAGAGTTaGAGCAGTTTTATGTGTCTCTACCACAGAGGTAGT +
Preference number: 6 (lower is better)
Translates to: CGLSLICRNRQS*SSFMCLYHRGS
Trigger: ACTACCTCTGTGGTAGAGACACATAAAACTGCTCCAACTCTGTCTGTTCCTGCAGATCAAAGAGAGACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GGTGGTACTTGGCTCAGGAGTTGTAGTAAGTATGTCTaGACCAAGAATGGGGTAACCATTCACATAGAGACT +
Preference number: 6 (lower is better)
Translates to: GGTWLRSCSKYV*TKNGVTIHIET
Trigger: AGTCTCTATGTGAATGGTTACCCCATTCTTGGTCCAGACATACTTACTACAACTCCTGAGCCAAGTACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp GTTGATAGTAAAATGCTCCAGGACAGGCCCTGCTGTTaGAGATGTGATAGACTGGATCTGGTGTGTATAACA +
Preference number: 6 (lower is better)
Translates to: VDSKMLQDRPCC*RCDRLDLVCIT
Trigger: TGTTATACACACCAGATCCAGTCTATCACATCTCCAACAGCAGGGCCTGTCCTGGAGCATTTTACTATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207857.2
CDS CAA 72 bp GGTGAGAAGTTACATAGGGAATCTACCCCTGTGTGGTaGTTGTTGTTGGAGACAGACCTGAAGGCTAATACT +
Preference number: 6 (lower is better)
Translates to: GEKLHRESTPVW*LLLETDLKANT
Trigger: AGTATTAGCCTTCAGGTCTGTCTCCAACAACAACAACCACACAGGGGTAGATTCCCTATGTAACTTCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp TCAGGGGTAGGTGTCCATGATGCTGAAGCAAGATTGTaGAAAGGAGCCCTGGATTCTGAATGTGGAAATGTA +
Preference number: 6 (lower is better)
Translates to: SGVGVHDAEARL*KGALDSECGNV
Trigger: TACATTTCCACATTCAGAATCCAGGGCTCCTTTCAACAATCTTGCTTCAGCATCATGGACACCTACCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TTCTCAGGGGTAGGTGTCCATGATGCTGAAGCAAGATaGTTGAAAGGAGCCCTGGATTCTGAATGTGGAAAT +
Preference number: 6 (lower is better)
Translates to: FSGVGVHDAEAR*LKGALDSECGN
Trigger: ATTTCCACATTCAGAATCCAGGGCTCCTTTCAACAATCTTGCTTCAGCATCATGGACACCTACCCCTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TTGTGGCAAAGAAGGTCATCCCTCTGGGAGAAAGTGTaGCTGTTGTGTCAATCAAAGTGGTTTCAGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LWQRRSSLWEKV*LLCQSKWFQLK
Trigger: CTTCAGCTGAAACCACTTTGATTGACACAACAGCAACACTTTCTCCCAGAGGGATGACCTTCTTTGCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp AAAGGACATCTACTTGGGTCTGGGCACCATTCTTCATaGACCTTAGAGTGGCTACTCTACAGCCTGTGTATA +
Preference number: 6 (lower is better)
Translates to: KGHLLGSGHHSS*TLEWLLYSLCI
Trigger: TATACACAGGCTGTAGAGTAGCCACTCTAAGGTCAATGAAGAATGGTGCCCAGACCCAAGTAGATGTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp GTTTCCTCTTCCAGTTTGGGCAGACCATGTGGTTGTGGATCCTGCTaGATCAATGAAAATACTCATTGTAGAAGCCACAGAAAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: VSSSSLGRPCGCGSC*INENTHCRSHRKAF
Trigger: GAAAGCCTTTCTGTGGCTTCTACAATGAGTATTTTCATTGATCAAGCAGGATCCACAACCACATGGTCTGCCCAAACTGGAAGAGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CTACCCCTGTGTGGTTGTTGTTGTTGGAGACAGACCTaGAGGCTAATACTTGACAGTCAGAAAAGTAACTCT +
Preference number: 6 (lower is better)
Translates to: LPLCGCCCWRQT*RLILDSQKSNS
Trigger: AGAGTTACTTTTCTGACTGTCAAGTATTAGCCTTCAGGTCTGTCTCCAACAACAACAACCACACAGGGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp GCAGCCAGGAAATCAAGGGAGGAGACATTTTGTCCTTaGGAGGTAGAAGTAACAGGTGAAAGTGTAGTTTTC +
Preference number: 6 (lower is better)
Translates to: AARKSREETFCP*EVEVTGESVVF
Trigger: GAAAACTACACTTTCACCTGTTACTTCTACCTCTCAAGGACAAAATGTCTCCTCCCTTGATTTCCTGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GGAGTCGAAAGCATTGCAAAGCTTTCTGTGCCAGGTTaGGTGACCACTGATGGTTTGATTTTTGTTCTACCT +
Preference number: 6 (lower is better)
Translates to: GVESIAKLSVPG*VTTDGLIFVLP
Trigger: AGGTAGAACAAAAATCAAACCATCAGTGGTCACTCAACCTGGCACAGAAAGCTTTGCAATGCTTTCGACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CCAGTATGGGTTGCCCATGTGTTTGTGGATCTTGCTTaGTCTACGAAAATCCCCATTGTAGAAGTCAATGAC +
Preference number: 6 (lower is better)
Translates to: PVWVAHVFVDLA*STKIPIVEVND
Trigger: GTCATTGACTTCTACAATGGGGATTTTCGTAGATCAAGCAAGATCCACAAACACATGGGCAACCCATACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp ATACAGTCCCTGAAGTGCTTTCTCCTCCAGCCTGGATaGCATATGGTGTTATGGTCTTTGTTTCAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: IQSLKCFLLQPG*HMVLWSLFQKK
Trigger: CTTCTTCTGAAACAAAGACCATAACACCATATGTCATCCAGGCTGGAGGAGAAAGCACTTCAGGGACTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CCAGTATGGGCAGACCATGTGGTTGTAGATCCTGCTTaGTCTATGGAAATAACCTGTGTAGAAGTTGCTGAA +
Preference number: 6 (lower is better)
Translates to: PVWADHVVVDPA*SMEITCVEVAE
Trigger: TTCAGCAACTTCTACACAGGTTATTTCCATAGATCAAGCAGGATCTACAACCACATGGTCTGCCCATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GTAGATACAGTCCCTGAAGTGCTTTCTCCTCCAGCATaGGTGATGAATGAAGTTATGGTCTGTGTTTCAGAG +
Preference number: 6 (lower is better)
Translates to: VDTVPEVLSPPA*VMNEVMVCVSE
Trigger: CTCTGAAACACAGACCATAACTTCATTCATCACTCATGCTGGAGGAGAAAGCACTTCAGGGACTGTATCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CCAGTTTGGGCAGACCATGTGGTTGTGGATCCTGCTTaGTCAATGAAAATACTCATTGTAGAAGCCACAGAA +
Preference number: 6 (lower is better)
Translates to: PVWADHVVVDPA*SMKILIVEATE
Trigger: TTCTGTGGCTTCTACAATGAGTATTTTCATTGATCAAGCAGGATCCACAACCACATGGTCTGCCCAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GTGCAACTTGAATTGAAGGAGCCATTCTGGAACAAGTaGCTAAGCAAGTATTGCACGACACTCTCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: VQLELKEPFWNK*LSKYCTTLSVE
Trigger: CTCAACAGAGAGTGTCGTGCAATACTTGCTTAGTCACTTGTTCCAGAATGGCTCCTTCAATTCAAGTTGCAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp TTTCAATACTTCTTTTGGTTTGCTGGTATTTGGTGGTaGTTGGCTGGGCTATGTCTTGGGAATAGGGTAGGT +
Preference number: 6 (lower is better)
Translates to: FQYFFWFAGIWW*LAGLCLGNRVG
Trigger: ACCTACCCTATTCCCAAGACATAGCCCAGCCAAGCACCACCAAATACCAGCAAACCAAAAGAAGTATTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp TGTGTCCCAGCATGGGTAACCAGTGATGTTATGGTGTaGACATTCGAAGAAGTATGGTTCCAAGATTTTGAG +
Preference number: 6 (lower is better)
Translates to: CVPAWVTSDVMV*TFEEVWFQDFE
Trigger: CTCAAAATCTTGGAACCATACTTCTTCGAATGTGCACACCATAACATCACTGGTTACCCATGCTGGGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp TCTTCCAGTATGGGTACTTGCTGGGGTTGTGGATTCTaGTTCACCTGTGAAAATATCCAGAGTAGAAGTTAC +
Preference number: 6 (lower is better)
Translates to: SSSMGTCWGCGF*FTCENIQSRSY
Trigger: GTAACTTCTACTCTGGATATTTTCACAGGTGAAGCAGAATCCACAACCCCAGCAAGTACCCATACTGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp TCTCCCAGTATGGGTTGCCCATGTGTTTGTGGATCTTaGTTGATCTACGAAAATCCCCATTGTAGAAGTCAA +
Preference number: 6 (lower is better)
Translates to: SPSMGCPCVCGS*LIYENPHCRSQ
Trigger: TTGACTTCTACAATGGGGATTTTCGTAGATCAAGCAAGATCCACAAACACATGGGCAACCCATACTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp TCTTCCAGTATGGGCAGACCATGTGGTTGTAGATCCTaGTTGATCTATGGAAATAACCTGTGTAGAAGTTGC +
Preference number: 6 (lower is better)
Translates to: SSSMGRPCGCRS*LIYGNNLCRSC
Trigger: GCAACTTCTACACAGGTTATTTCCATAGATCAAGCAGGATCTACAACCACATGGTCTGCCCATACTGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp CTCCTCACTGAGTTCTCCAGTGGTGGTATTTGGTGCTaGAGCTCCAAAACTATTACCATTTATGTAGAGACT +
Preference number: 6 (lower is better)
Translates to: LLTEFSSGGIWC*SSKTITIYVET
Trigger: AGTCTCTACATAAATGGTAATAGTTTTGGAGCTGCAGCACCAAATACCACCACTGGAGAACTCAGTGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp TTGAAGGAGTTATTCTGGAACAAGGGTCTAAGCAGGTaGTGTAGAACACTCTCAGTAGAGTTGAACATGGCT +
Preference number: 6 (lower is better)
Translates to: LKELFWNKGLSR*CRTLSVELNMA
Trigger: AGCCATGTTCAACTCTACTGAGAGTGTTCTACAGCACCTGCTTAGACCCTTGTTCCAGAATAACTCCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp AATGGTGAGAAGTTACATAGGGAATCTACCCCTGTGTaGTTGTTGTTGTTGGAGACAGACCTGAAGGCTAAT +
Preference number: 6 (lower is better)
Translates to: NGEKLHRESTPV*LLLLETDLKAN
Trigger: ATTAGCCTTCAGGTCTGTCTCCAACAACAACAACCACACAGGGGTAGATTCCCTATGTAACTTCTCACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp ACAGCAGTAGCAACATCAGTCTCAGAACTTGGCAAGTaGAGAGTGGATTCAAGAGGTGAAGGTTTGTTTGTT +
Preference number: 6 (lower is better)
Translates to: TAVATSVSELGK*RVDSRGEGLFV
Trigger: AACAAACAAACCTTCACCTCTTGAATCCACTCTCCACTTGCCAAGTTCTGAGACTGATGTTGCTACTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TCTGCTTTTACTGTCCCCTCTGTGGTTAGATCTTTATaGTTAGCAGATGATGTAGAAGCCAGAGAACCCTTG +
Preference number: 6 (lower is better)
Translates to: SAFTVPSVVRSL*LADDVEAREPL
Trigger: CAAGGGTTCTCTGGCTTCTACATCATCTGCTAACCATAAAGATCTAACCACAGAGGGGACAGTAAAAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TGTCTTAAGACTGGGAATCTGGGGGATTGTAATTTCTaGTTTTCTACTGTAAGAAGATGGGCTTGTCCTGGC +
Preference number: 6 (lower is better)
Translates to: CLKTGNLGDCNF*FSTVRRWACPG
Trigger: GCCAGGACAAGCCCATCTTCTTACAGTAGAAAACCAGAAATTACAATCCCCCAGATTCCCAGTCTTAAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp AAAGCAGACATGGTTGAACTGTGTTGTGCCCCAACATaGGTGACTAATGAAACTGTGGCATGTAGTTCAGAA +
Preference number: 6 (lower is better)
Translates to: KADMVELCCAPT*VTNETVACSSE
Trigger: TTCTGAACTACATGCCACAGTTTCATTAGTCACCCATGTTGGGGCACAACACAGTTCAACCATGTCTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp AGAGCAGACATGGGTGAACTGGAATTTCCCCCAAGTTaGGTTACTAATGAAACTGTGGTATGTGGTTCAGAA +
Preference number: 6 (lower is better)
Translates to: RADMGELEFPPS*VTNETVVCGSE
Trigger: TTCTGAACCACATACCACAGTTTCATTAGTAACCCAACTTGGGGGAAATTCCAGTTCACCCATGTCTGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp CCCAGAAGTAGCTTCCATTTCAGAATTACTGTTCCATaGTGTAATGGTCCCATTAGTTTCTGCTTGACCTGG +
Preference number: 6 (lower is better)
Translates to: PRSSFHFRITVP*CNGPISFCLTW
Trigger: CCAGGTCAAGCAGAAACTAATGGGACCATTACACCATGGAACAGTAATTCTGAAATGGAAGCTACTTCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp AAAGTAGACATGGATGAAGTGGATGGCCCCACAACATaGGTGACTAATGGAACTTTAGTAGGTGGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: KVDMDEVDGPTT*VTNGTLVGGSE
Trigger: TTCAGAACCACCTACTAAAGTTCCATTAGTCACCCATGTTGTGGGGCCATCCACTTCATCCATGTCTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp CTGAAGTGTTTTCTCTTCCAGTATGTGTGGCCCATGTaGTTGTGGATACTGCTTGGTTTACAGAAGTATCCT +
Preference number: 6 (lower is better)
Translates to: LKCFLFQYVWPM*LWILLGLQKYP
Trigger: AGGATACTTCTGTAAACCAAGCAGTATCCACAACCACATGGGCCACACATACTGGAAGAGAAAACACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GTCATTATAAGAAAATGTGGAAGTTATTGTGGGGTGTaGGGTGCTGGTCTTGGCAGAAAGTATGAGCCATGT +
Preference number: 6 (lower is better)
Translates to: VIIRKCGSYCGV*GAGLGRKYEPC
Trigger: ACATGGCTCATACTTTCTGCCAAGACCAGCACCCCACACCCCACAATAACTTCCACATTTTCTTATAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GAACAGCTCCTCACTGAGTTCTCCAGTGGTGGTATTTaGTGCTGCAGCTCCAAAACTATTACCATTTATGTA +
Preference number: 6 (lower is better)
Translates to: EQLLTEFSSGGI*CCSSKTITIYV
Trigger: TACATAAATGGTAATAGTTTTGGAGCTGCAGCACCAAATACCACCACTGGAGAACTCAGTGAGGAGCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp TGTGGAAATGTTTGGACCCTACTGGAGTTAGTGACATaGATTGAGGCAGAGGTTGATGGGCTTTTAGAAGTC +
Preference number: 6 (lower is better)
Translates to: CGNVWTLLELVT*IEAEVDGLLEV
Trigger: GACTTCTAAAAGCCCATCAACCTCTGCCTCAATCAATGTCACTAACTCCAGTAGGGTCCAAACATTTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp ACTTGGTGGAGATTCCAGTGGAAGTGTCCTCTGATATaGAATGGTGTAACTTGGAAAGGAATGTACTGCCAG +
Preference number: 6 (lower is better)
Translates to: TWWRFQWKCPLI*NGVTWKGMYCQ
Trigger: CTGGCAGTACATTCCTTTCCAAGTTACACCATTCAATATCAGAGGACACTTCCACTGGAATCTCCACCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GTAAAGACTGAGACAACAGGACTAGGAGAAGGGGTGTaGTTTTCTCCTGTGGAAGTAACAGAGGATGTTAAG +
Preference number: 6 (lower is better)
Translates to: VKTETTGLGEGV*FSPVEVTEDVK
Trigger: CTTAACATCCTCTGTTACTTCCACAGGAGAAAACAACACCCCTTCTCCTAGTCCTGTTGTCTCAGTCTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp CTTGGCAAGTGGAGAGTGGATTCAAGAGGTGAAGGTTaGTTTGTTTGTAGGGATATGCTAGTGTCCCTCAAT +
Preference number: 6 (lower is better)
Translates to: LGKWRVDSRGEG*FVCRDMLVSLN
Trigger: ATTGAGGGACACTAGCATATCCCTACAAACAAACAAACCTTCACCTCTTGAATCCACTCTCCACTTGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp AATTTTGTTATACTTGGAGAGGCTGCCTTAGTAGACTaGGAAAAACTGGACTGTGTCCCAGCATGGGTAACC +
Preference number: 6 (lower is better)
Translates to: NFVILGEAALVD*EKLDCVPAWVT
Trigger: GGTTACCCATGCTGGGACACAGTCCAGTTTTTCCAAGTCTACTAAGGCAGCCTCTCCAAGTATAACAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GCACTAGTTGAGATGACTGTAGATAGTGTAAGTGAATaGCCTTCTCTTTCAGTATGGGTGTCTCCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: ALVEMTVDSVSE*PSLSVWVSPEA
Trigger: AGCCTCAGGAGACACCCATACTGAAAGAGAAGGCAATTCACTTACACTATCTACAGTCATCTCAACTAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TCCAGTTTGGGCAGACCATGTGGTTGTGGATCCTGCTaGATCAATGAAAATACTCATTGTAGAAGCCACAGA +
Preference number: 6 (lower is better)
Translates to: SSLGRPCGCGSC*INENTHCRSHR
Trigger: TCTGTGGCTTCTACAATGAGTATTTTCATTGATCAAGCAGGATCCACAACCACATGGTCTGCCCAAACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp CCACTGTGTTGGGTCTCTGTGTTTGAAGAAGTGGTTGATAGATCTTaGGAAGTTACCATGTTTGATGTCACCACAGTATGTTCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: PLCWVSVFEEVVDRS*EVTMFDVTTVCSLW
Trigger: CCACAGAGAACATACTGTGGTGACATCAAACATGGTAACTTCCAAAGATCTATCAACCACTTCTTCAAACACAGAGACCCAACACAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp GATGCTGTTAATTTTGTTATACTTGGAGAGGCTGCCTTAGTAGACTaGGAAAAACTGGACTGTGTCCCAGCATGGGTAACCAGTGATGTT +
Preference number: 6 (lower is better)
Translates to: DAVNFVILGEAALVD*EKLDCVPAWVTSDV
Trigger: AACATCACTGGTTACCCATGCTGGGACACAGTCCAGTTTTTCCAAGTCTACTAAGGCAGCCTCTCCAAGTATAACAAAATTAACAGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp ATAATTATGAGAGACACTGGAGTGCATTCCTGCCCCTaGGGTAGTTGCTGGTATACCTTGAGATGCAATAAT +
Preference number: 6 (lower is better)
Translates to: IIMRDTGVHSCP*GSCWYTLRCNN
Trigger: ATTATTGCATCTCAAGGTATACCAGCAACTACCTCAGGGGCAGGAATGCACTCCAGTGTCTCTCATAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CACAGATTCTTCCCAAAGATTATGTGTCTGTGGTCCTaGAGTAATATTTTTGGGAGGATCCATGGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: HRFFPKIMCLWS*SNIFGRIHGFW
Trigger: CCAGAAGCCATGGATCCTCCCAAAAATATTACTTCAGGACCACAGACACATAATCTTTGGGAAGAATCTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp ATGGAGGTTCCAGAGGAAGTATCTTGCAATGTTGATTaGAGGTCTGAAATGGATATGCTGTCAGCAGACGTA +
Preference number: 6 (lower is better)
Translates to: MEVPEEVSCNVD*RSEMDMLSADV
Trigger: TACGTCTGCTGACAGCATATCCATTTCAGACCTTCAATCAACATTGCAAGATACTTCCTCTGGAACCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TCAGAATGTTTGTCCCATGGTGTTCTAGTGTCTGGTTaGCCTGAAAACACAGGCAGAGTTGAAGTTATTGCA +
Preference number: 6 (lower is better)
Translates to: SECLSHGVLVSG*PENTGRVEVIA
Trigger: TGCAATAACTTCAACTCTGCCTGTGTTTTCAGGTCAACCAGACACTAGAACACCATGGGACAAACATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TTGAAGTCATTGCATAGCTTTCTGTGCCTAAGTCAGTaGATAGTGATGGTGTCACTTCTGTTATCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: LKSLHSFLCLSQ*IVMVSLLLSWE
Trigger: CTCCCAGGATAACAGAAGTGACACCATCACTATTCACTGACTTAGGCACAGAAAGCTATGCAATGACTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TGCTTGATCTACGAAAATCCCCATTGTAGAAGTCAATaGCTGGCTTTCTGCTCCATAGCTAGTGTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: CLIYENPHCRSQ*LAFCSIASVQF
Trigger: AAACTGGACACTAGCTATGGAGCAGAAAGCCAGTCATTGACTTCTACAATGGGGATTTTCGTAGATCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp CATTGCAAACCTTTTTGGGCCTATGTCAGTGAACTCTaGTGGTATCACTTCTGTTATCCTGGGAGAGATATC +
Preference number: 6 (lower is better)
Translates to: HCKPFWAYVSEL*WYHFCYPGRDI
Trigger: GATATCTCTCCCAGGATAACAGAAGTGATACCATCAGAGTTCACTGACATAGGCCCAAAAAGGTTTGCAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TTGAAGTCATTGCAAACCTTTTTGGGCCTATGTCAGTaGACTCTGATGGTATCACTTCTGTTATCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: LKSLQTFLGLCQ*TLMVSLLLSWE
Trigger: CTCCCAGGATAACAGAAGTGATACCATCAGAGTTCACTGACATAGGCCCAAAAAGGTTTGCAATGACTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TTTAGGGGTCCAGTACTGATGGTGATAACTTGGCCTTaGAGTCACATTCTCAGGGGACAATGTAGATATTCT +
Preference number: 6 (lower is better)
Translates to: FRGPVLMVITWP*SHILRGQCRYS
Trigger: AGAATATCTACATTGTCCCCTGAGAATGTGACTTCAAGGCCAAGTTATCACCATCAGTACTGGACCCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp ATTCTTCCTAGACCTAAGGGAATCCAGTGTGCAACTTaGATTGAAGGAGCCATTCTGGAACAAGTGACTAAG +
Preference number: 6 (lower is better)
Translates to: ILPRPKGIQCAT*IEGAILEQVTK
Trigger: CTTAGTCACTTGTTCCAGAATGGCTCCTTCAATTCAAGTTGCACACTGGATTCCCTTAGGTCTAGGAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp GAAATGCTGAGAACTGGAACTGGTTGTTGGTATTTCTaGTGGCAGAAGAATGGATGTCTTCATGTCTATCAC +
Preference number: 6 (lower is better)
Translates to: EMLRTGTGCWYF*WQKNGCLHVYH
Trigger: GTGATAGACATGAAGACATCCATTCTTCTGCCAGCAGAAATACCAACAACCAGTTCCAGTTCTCAGCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp CCATGGACAGCTCCATTAGATATGTCTGTGTGGTATTaGATGCCATCTTCCATTTCTGAAGGAGTAGTAATC +
Preference number: 6 (lower is better)
Translates to: PWTAPLDMSVWY*MPSSISEGVVI
Trigger: GATTACTACTCCTTCAGAAATGGAAGATGGCATGCAATACCACACAGACATATCTAATGGAGCTGTCCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp AGTTGGACCAAACAATCTGTCTTCTTGTTCAATAGATaGCAAATCTGGTATGGCAGAGGAAACAGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: SWTKQSVFLFNR*QIWYGRGNSCC
Trigger: ACAGCAGCTGTTTCCTCTGCCATACCAGATTTGGCATCTATTGAACAAGAAGACAGATTGTTTGGTCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp ACTGATGGTTTGATTTTTGTTCTACCTGTAGAGGTTTaGAGAATATACATGGCTGAACTGGACTGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: TDGLIFVLPVEV*RIYMAELDCPP
Trigger: TGGGGGACAGTCCAGTTCAGCCATGTATATTCTGCAAACCTCTACAGGTAGAACAAAAATCAAACCATCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp GTTGTTTATCATCCCCATAGAAGCAATGGTCATCATTaGCATCTGAGTAGTGGTAGCCACAATCTGATGTGT +
Preference number: 6 (lower is better)
Translates to: VVYHPHRSNGHH*HLSSGSHNLMC
Trigger: ACACATCAGATTGTGGCTACCACTACTCAGATGGCAATGATGACCATTGCTTCTATGGGGATGATAAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp CTGTTCCATCTTTCTCAGGCCTCAGCGAGATCAATCTaGAGCCATAATAAAGATGTCCAATACTGCTATTCT +
Preference number: 6 (lower is better)
Translates to: LFHLSQASARSI*SHNKDVQYCYS
Trigger: AGAATAGCAGTATTGGACATCTTTATTATGGCTGCAGATTGATCTCGCTGAGGCCTGAGAAAGATGGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207857.2
CDS CCA 72 bp TGGAACTGGTTGTTGGTATTTCTGCTGGCAGAAGAATaGATGTCTTCATGTCTATCACGTGCAGATCTTTCA +
Preference number: 6 (lower is better)
Translates to: WNWLLVFLLAEE*MSSCLSRADLS
Trigger: TGAAAGATCTGCACGTGATAGACATGAAGACATCCATTCTTCTGCCAGCAGAAATACCAACAACCAGTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp GTTCAGGTTGAAATGCTGAGAACTGGAACTGGTTGTTaGTATTTCTGCTGGCAGAAGAATGGATGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: VQVEMLRTGTGC*YFCWQKNGCLH
Trigger: ATGAAGACATCCATTCTTCTGCCAGCAGAAATACCAACAACCAGTTCCAGTTCTCAGCATTTCAACCTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp CATTTTCAATACTTCTTTTGGTTTGCTGGTATTTGGTaGTGCTTGGCTGGGCTATGTCTTGGGAATAGGGTA +
Preference number: 6 (lower is better)
Translates to: HFQYFFWFAGIW*CLAGLCLGNRV
Trigger: TACCCTATTCCCAAGACATAGCCCAGCCAAGCACCACCAAATACCAGCAAACCAAAAGAAGTATTGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034653.7
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp GTGGAGAGTCTGTCCATGAGAGTAACTCAGAACTGCTaGGATGAGAGATTGAGTCTGAATGTAAAAATGTCT +
Preference number: 6 (lower is better)
Translates to: VESLSMRVTQNC*DERLSLNVKMS
Trigger: AGACATTTTTACATTCAGACTCAATCTCTCATCCCAGCAGTTCTGAGTTACTCTCATGGACAGACTCTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GGTGATATATGTTTCTCTTCCATAATTAGGGGCCTGTaGTATCATCATTTCTCTCATACCTGGAGAGAGAGC +
Preference number: 6 (lower is better)
Translates to: GDICFSSIIRGL*YHHFSHTWRES
Trigger: GCTCTCTCTCCAGGTATGAGAGAAATGATGATACCACAGGCCCCTAATTATGGAAGAGAAACATATATCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp AGTGTAGACATATCTGAACTATGTTGTTCTCCATTATaGGTGACCAATGAAGCTGTGGTGTGTGGTCCAGAA +
Preference number: 6 (lower is better)
Translates to: SVDISELCCSPL*VTNEAVVCGPE
Trigger: TTCTGGACCACACACCACAGCTTCATTGGTCACCCATAATGGAGAACAACATAGTTCAGATATGTCTACACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TTAGATACAGTCCCTGAAGTGCTTTCTCCTCCAGCCTaGATGACATATGGTGTTATGGTCTTTGTTTCAGAA +
Preference number: 6 (lower is better)
Translates to: LDTVPEVLSPPA*MTYGVMVFVSE
Trigger: TTCTGAAACAAAGACCATAACACCATATGTCATCCAGGCTGGAGGAGAAAGCACTTCAGGGACTGTATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TGTTTTCTCTTCCAGTATGTGTGGCCCATGTGGTTGTaGATACTGCTTGGTTTACAGAAGTATCCTGAATTG +
Preference number: 6 (lower is better)
Translates to: CFLFQYVWPMWL*ILLGLQKYPEL
Trigger: CAATTCAGGATACTTCTGTAAACCAAGCAGTATCCACAACCACATGGGCCACACATACTGGAAGAGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp AAAGTAGACATGGATGAAGTGGATGGCCCCACAACATaGGTAACTAATGGAACTTTAGTAGGTGGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: KVDMDEVDGPTT*VTNGTLVGGSE
Trigger: TTCAGAACCACCTACTAAAGTTCCATTAGTTACCCATGTTGTGGGGCCATCCACTTCATCCATGTCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp CCTTCCAGTGGTGATGAATTTGTTCTGGAGGGGACTTaGTCACTTTTGAGAAGAGTGGATGTCTCTAACAAT +
Preference number: 6 (lower is better)
Translates to: PSSGDEFVLEGT*SLLRRVDVSNN
Trigger: ATTGTTAGAGACATCCACTCTTCTCAAAAGTGACAAAGTCCCCTCCAGAACAAATTCATCACCACTGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp AGTTCAGATGGCACTGAAACAGATGTGGTGGTGTATTaGAATTCAGGTACAGAATGGCTGTCTCCCATGTTA +
Preference number: 6 (lower is better)
Translates to: SSDGTETDVVVY*NSGTEWLSPML
Trigger: TAACATGGGAGACAGCCATTCTGTACCTGAATTCAAATACACCACCACATCTGTTTCAGTGCCATCTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TCTGTAATTGTGGGGGCTGGACTGAAACTCATGAAATaGTCTGACTCTGATGACATGGTTGACGTTTTTAGG +
Preference number: 6 (lower is better)
Translates to: SVIVGAGLKLMK*SDSDDMVDVFR
Trigger: CCTAAAAACGTCAACCATGTCATCAGAGTCAGACAATTTCATGAGTTTCAGTCCAGCCCCCACAATTACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp CTGTCTTTTCCTCTGGAACTGGTGGCTGTGGACACCTaGGAATCTAATTCAACTTGTGAAGCATTTTTGGTT +
Preference number: 6 (lower is better)
Translates to: LSFPLELVAVDT*ESNSTCEAFLV
Trigger: AACCAAAAATGCTTCACAAGTTGAATTAGATTCCAAGGTGTCCACAGCCACCAGTTCCAGAGGAAAAGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp AAGTGTTTTCTCTTCCAGTATGTGTGGCCCATGTGGTaGTGGATACTGCTTGGTTTACAGAAGTATCCTGAA +
Preference number: 6 (lower is better)
Translates to: KCFLFQYVWPMW*WILLGLQKYPE
Trigger: TTCAGGATACTTCTGTAAACCAAGCAGTATCCACAACCACATGGGCCACACATACTGGAAGAGAAAACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp ATGTTCTCCACATACTTCAGATTAGTGACAGTGAAGTaGATGGTAAAAGGAACCAGCCCAGAACCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: MFSTYFRLVTVK*MVKGTSPEPAV
Trigger: TACAGCAGGTTCTGGGCTGGTTCCTTTTACCATCAACTTCACTGTCACTAATCTGAAGTATGTGGAGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp ATAGAGACTATTCTGGTCAAGGCTATAGGGACCCAGTaGAGTAATGTTGTGGGTGAGTTGTTCAAGTTCCAA +
Preference number: 6 (lower is better)
Translates to: IETILVKAIGTQ*SNVVGELFKFQ
Trigger: TTGGAACTTGAACAACTCACCCACAACATTACTCAACTGGGTCCCTATAGCCTTGACCAGAATAGTCTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp ATGTTCTCCGTGTACAGTAGATTGGTGATAGTGAAGTaGAAGGTAAATATCTCCAAGGGTGATTTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: MFSVYSRLVIVK*KVNISKGDLLG
Trigger: CCCCAGCAAATCACCCTTGGAGATATTTACCTTCAACTTCACTATCACCAATCTACTGTACACGGAGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp GTGAAGTTGAGAGTAATGGATACCATGACAGTACCGTaGCCTGTGGAATTGTTTGTAGAGTATGGAACCAGA +
Preference number: 6 (lower is better)
Translates to: VKLRVMDTMTVP*PVELFVEYGTR
Trigger: TCTGGTTCCATACTCTACAAACAATTCCACAGGCAACGGTACTGTCATGGTATCCATTACTCTCAACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp TTGATGGTGAAAGGCACCAGAGAAGAGAGTGGCACATaGATGTACAGACTGTCCTTTTCTAAAGTGAAGGAT +
Preference number: 6 (lower is better)
Translates to: LMVKGTREESGT*MYRLSFSKVKD
Trigger: ATCCTTCACTTTAGAAAAGGACAGTCTGTACATCAATGTGCCACTCTCTTCTCTGGTGCCTTTCACCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207857.2
CDS CAA 90 bp CTCGTCAGGGTTCTGCCAGCTCTAATGGATTCTGAAACAGAAAATTaGGGTTGGGGTATAGAACTGCTGACTTCTGTAATTATTTCTGAG +
Preference number: 6 (lower is better)
Translates to: LVRVLPALMDSETEN*GWGIELLTSVIISE
Trigger: CTCAGAAATAATTACAGAAGTCAGCAGTTCTATACCCCAACCCAAATTTTCTGTTTCAGAATCCATTAGAGCTGGCAGAACCCTGACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp TTGATCTCTGTGGTAATAGAGGAGAAGCAGAAGCAGAAATCTTGGTaGGTATTATCAACAAGGAAGAGGCAGTACTATCTGCCGAAAGAG +
Preference number: 6 (lower is better)
Translates to: LISVVIEEKQKQKSW*VLSTRKRQYYLPKE
Trigger: CTCTTTCGGCAGATAGTACTGCCTCTTCCTTGTTGATAATACCAACCAAGATTTCTGCTTCTGCTTCTCCTCTATTACCACAGAGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp GAGTTTGATCTCTGTGGTAATAGAGGAGAAGCAGAAGCAGAAATCTaGGTTGGTATTATCAACAAGGAAGAGGCAGTACTATCTGCCGAA +
Preference number: 6 (lower is better)
Translates to: EFDLCGNRGEAEAEI*VGIINKEEAVLSAE
Trigger: TTCGGCAGATAGTACTGCCTCTTCCTTGTTGATAATACCAACCAAGATTTCTGCTTCTGCTTCTCCTCTATTACCACAGAGATCAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp TTGAACACAGCTGAGCCATTGTTCATATGTGCTGAATATGGAAGATaGGAAATAGTGAAGCTGACTGTGACAGTCTTCAAATGGTACCCC +
Preference number: 6 (lower is better)
Translates to: LNTAEPLFICAEYGR*EIVKLTVTVFKWYP
Trigger: GGGGTACCATTTGAAGACTGTCACAGTCAGCTTCACTATTTCCAATCTTCCATATTCAGCACATATGAACAATGGCTCAGCTGTGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp ATCAGTATCTTCAGACCTGGTGGTTTCCTGTTCTATTaGAGTTATGGGGAAAGCTTTCTGAGTTTCTGCATG +
Preference number: 6 (lower is better)
Translates to: ISIFRPGGFLFY*SYGESFLSFCM
Trigger: CATGCAGAAACTCAGAAAGCTTTCCCCATAACTTCAATAGAACAGGAAACCACCAGGTCTGAAGATACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp AAAGAAAAGTGTAGAGCTACTGGAGGCATTTCCCACTaGGGTGTCTGTTGTCTTTGCAAAGGATACAGAATT +
Preference number: 6 (lower is better)
Translates to: KEKCRATGGISH*GVCCLCKGYRI
Trigger: AATTCTGTATCCTTTGCAAAGACAACAGACACCTCAGTGGGAAATGCCTCCAGTAGCTCTACACTTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp AGAGTTGAAGTCACTGAATGGATTTCTGTGCCAGTGTaGGTTTGCTCTGAAGGCATGATTTCTGTTTTACCT +
Preference number: 6 (lower is better)
Translates to: RVEVTEWISVPV*VCSEGMISVLP
Trigger: AGGTAAAACAGAAATCATGCCTTCAGAGCAAACTCACACTGGCACAGAAATCCATTCAGTGACTTCAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TCTGATTGGGTTACCCATGCAGTTGTTAATTCTTCTTaGCCTGCAGAAACATCCAGAGTTGAAGTCACTGAA +
Preference number: 6 (lower is better)
Translates to: SDWVTHAVVNSS*PAETSRVEVTE
Trigger: TTCAGTGACTTCAACTCTGGATGTTTCTGCAGGTCAAGAAGAATTAACAACTGCATGGGTAACCCAATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp ACTTGGACTGGATTGTCCCCCAACATAGGTGACCGATaGTATTGTGGTATGTTCAGAAGGATTATGAGTTTT +
Preference number: 6 (lower is better)
Translates to: TWTGLSPNIGDR*YCGMFRRIMSF
Trigger: AAAACTCATAATCCTTCTGAACATACCACAATATCATCGGTCACCTATGTTGGGGGACAATCCAGTCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TGGCTGAGCTGGTCTCTACCTCAGATACTGAGGAAGTaGTGTCATTATAAGAAAATGTGGAAGTTATTGTGG +
Preference number: 6 (lower is better)
Translates to: WLSWSLPQILRK*CHYKKMWKLLW
Trigger: CCACAATAACTTCCACATTTTCTTATAATGACATCACTTCCTCAGTATCTGAGGTAGAGACCAGCTCAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp TGTGTTTATCTGTTCAGATGTACTGAAATCTGTCCATaGTGTCCTCAAGGGGAAAGATATACCTCTCTCAGT +
Preference number: 6 (lower is better)
Translates to: CVYLFRCTEICP*CPQGERYTSLS
Trigger: ACTGAGAGAGGTATATCTTTCCCCTTGAGGACAGCATGGACAGATTTCAGTACATCTGAACAGATAAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp ACCAGTGATTCCATGATCTGTGTATTAGAGGCAGAGTaGCTCTTAGTTATTGAGGTCATCATATCTGGTACA +
Preference number: 6 (lower is better)
Translates to: TSDSMICVLEAE*LLVIEVIISGT
Trigger: TGTACCAGATATGATGACCTCAATAACTAAGAGGCACTCTGCCTCTAATACACAGATCATGGAATCACTGGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp CCTCTCTGTGTTGTTGAATATTTCAGATCCTTGAAATaGCATACCCTCTGTATGCTGCAGGTTGGTTATAGT +
Preference number: 6 (lower is better)
Translates to: PLCVVEYFRSLK*HTLCMLQVGYS
Trigger: ACTATAACCAACCTGCAGCATACAGAGGGTATGGCATTTCAAGGATCTGAAATATTCAACAACACAGAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207509.2
ENSMUST00000207857.2
CDS CCA 72 bp GTCACCATGCTTGATGTCACCACAGAATGTCCATTGTaGCTATTTGACAACTGTTGTAATTTCGAAGTGATG +
Preference number: 6 (lower is better)
Translates to: VTMLDVTTECPL*LFDNCCNFEVM
Trigger: CATCACTTCGAAATTACAACAGTTGTCAAATAGCCACAATGGACATTCTGTGGTGACATCAAGCATGGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GTGTTCCACTGTGTTGGGTCTCTGTGTTTGAAGAAGTaGTTGATAGATCTTTGGAAGTTACCATGTTTGATG +
Preference number: 6 (lower is better)
Translates to: VFHCVGSLCLKK*LIDLWKLPCLM
Trigger: CATCAAACATGGTAACTTCCAAAGATCTATCAACCACTTCTTCAAACACAGAGACCCAACACAGTGGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GATTCTAAAGGAGAAGGGCTAGTGGAAAGTTCAGTATaGCTAGTGCTGTATTCTGTGCTTGTGTTTATCTGT +
Preference number: 6 (lower is better)
Translates to: DSKGEGLVESSV*LVLYSVLVFIC
Trigger: ACAGATAAACACAAGCACAGAATACAGCACTAGCCATACTGAACTTTCCACTAGCCCTTCTCCTTTAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp ATTCTTGATGGAACTGAATTAACTAGGACAGTGCCTTaGGGATGCATTGCAGGACTATCAGTTTCTACTCTT +
Preference number: 6 (lower is better)
Translates to: ILDGTELTRTVP*GCIAGLSVSTL
Trigger: AAGAGTAGAAACTGATAGTCCTGCAATGCATCCCCAAGGCACTGTCCTAGTTAATTCAGTTCCATCAAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TTCCTCAACATTAACTACTTGACTGATGTCAGTCCTTaGAAAGAAAAGTGTAGAGCTACTGGAGGCATTTCC +
Preference number: 6 (lower is better)
Translates to: FLNINYLTDVSP*KEKCRATGGIS
Trigger: GGAAATGCCTCCAGTAGCTCTACACTTTTCTTTCCAAGGACTGACATCAGTCAAGTAGTTAATGTTGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp AATGGTAGCTGTTGCTATTGGAATGTCAGTGAACTTTaGAGATGGACTCTGATATGGGGTTGGTATATTCAC +
Preference number: 6 (lower is better)
Translates to: NGSCCYWNVSEL*RWTLIWGWYIH
Trigger: GTGAATATACCAACCCCATATCAGAGTCCATCTCCAAAGTTCACTGACATTCCAATAGCAACAGCTACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp ATGGTAGCAAACAAATGGCTTGACTGTATCATAGAATaGGAACTCTCAGAAGTCACAGCTGAAATGCCTGTT +
Preference number: 6 (lower is better)
Translates to: MVANKWLDCIIE*ELSEVTAEMPV
Trigger: AACAGGCATTTCAGCTGTGACTTCTGAGAGTTCCCATTCTATGATACAGTCAAGCCATTTGTTTGCTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GCTAATGATGTTATGTTCTGTGGTTCAGGAGGAGTATaGTTCAGGTTTATTGTGGTCATCCTGTCTGTAACA +
Preference number: 6 (lower is better)
Translates to: ANDVMFCGSGGV*FRFIVVILSVT
Trigger: TGTTACAGACAGGATGACCACAATAAACCTGAACCATACTCCTCCTGAACCACAGAACATAACATCATTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp AAAGTAGACATTATTGACGTGGGTTGCCCCACATCATaGTTGGATAATGGAACTTTGGTATGTGGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: KVDIIDVGCPTS*LDNGTLVCGSE
Trigger: TTCAGAACCACATACCAAAGTTCCATTATCCAACCATGATGTGGGGCAACCCACGTCAATAATGTCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp CTGAAGTGTTTTCTCTTCCAGTATGTGTGGCCCATGTaGTTGTGGATACTGCTTTATTTACAGAAGTATCCT +
Preference number: 6 (lower is better)
Translates to: LKCFLFQYVWPM*LWILLYLQKYP
Trigger: AGGATACTTCTGTAAATAAAGCAGTATCCACAACCACATGGGCCACACATACTGGAAGAGAAAACACTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp ATTCAGTTCCTGAAGTGTTTTCTCTTCCAGTATGTGTaGCCCATGTGGTTGTGGATACTGCTTTATTTACAG +
Preference number: 6 (lower is better)
Translates to: IQFLKCFLFQYV*PMWLWILLYLQ
Trigger: CTGTAAATAAAGCAGTATCCACAACCACATGGGCCACACATACTGGAAGAGAAAACACTTCAGGAACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GTAGATACAGTCCCTGAAGTGCTTTCTTCTCCAGGATaGGTAATGAATGATGTTATAGCCTCTGTTTCAGAA +
Preference number: 6 (lower is better)
Translates to: VDTVPEVLSSPG*VMNDVIASVSE
Trigger: TTCTGAAACAGAGGCTATAACATCATTCATTACCCATCCTGGAGAAGAAAGCACTTCAGGGACTGTATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GATTATGAGTTTTTGAGGCCATCAAGTCTGGAATACTaGGAGAGATGTCTGTTCTTAGAATACTTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: DYEFLRPSSLEY*ERCLFLEYLRW
Trigger: CCACCTCAAGTATTCTAAGAACAGACATCTCTCCCAGTATTCCAGACTTGATGGCCTCAAAAACTCATAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TTGGATATGGTGAAGTTGATTGTAAGAATCTTTAGATaGTGCCCTGTGGTAGGTTCTGGATGCAAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: LDMVKLIVRIFR*CPVVGSGCKAV
Trigger: TACAGCTTTGCATCCAGAACCTACCACAGGGCACCATCTAAAGATTCTTACAATCAACTTCACCATATCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp TTGTTAAGGTTCCAGTTGATGATGCAGAAGTTTAGCTaGTACTTGCCCTGTATGGTTATATTCAGTGGCACA +
Preference number: 6 (lower is better)
Translates to: LLRFQLMMQKFS*YLPCMVIFSGT
Trigger: TGTGCCACTGAATATAACCATACAGGGCAAGTACCAGCTAAACTTCTGCATCATCAACTGGAACCTTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp CCAGCTTTGAAGGAATGTTACTTCTCCAATGTAAAGTaGAAGCAGTCACTGTTGTGCTTGTGTCCAACTTTC +
Preference number: 6 (lower is better)
Translates to: PALKECYFSNVK*KQSLLCLCPTF
Trigger: GAAAGTTGGACACAAGCACAACAGTGACTGCTTCAACTTTACATTGGAGAAGTAACATTCCTTCAAAGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp ATCCTGGAGAATTGCCCAGTGGGCTTCCTTTTAGAGTaGAAAAGGTTGCAATTGATGGGACTTCATAACTTT +
Preference number: 6 (lower is better)
Translates to: ILENCPVGFLLE*KRLQLMGLHNF
Trigger: AAAGTTATGAAGTCCCATCAATTGCAACCTTTTCAACTCTAAAAGGAAGCCCACTGGGCAATTCTCCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GTGGTAATAGAGGAGAAGCAGAAGCAGAAATCTTGGTaGGTATTATCAACAAGGAAGAGGCAGTACTATCTG +
Preference number: 6 (lower is better)
Translates to: VVIEEKQKQKSW*VLSTRKRQYYL
Trigger: CAGATAGTACTGCCTCTTCCTTGTTGATAATACCAACCAAGATTTCTGCTTCTGCTTCTCCTCTATTACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp CTCTGTGGTAATAGAGGAGAAGCAGAAGCAGAAATCTaGGTTGGTATTATCAACAAGGAAGAGGCAGTACTA +
Preference number: 6 (lower is better)
Translates to: LCGNRGEAEAEI*VGIINKEEAVL
Trigger: TAGTACTGCCTCTTCCTTGTTGATAATACCAACCAAGATTTCTGCTTCTGCTTCTCCTCTATTACCACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GTAATGGATACCATGACAGTACCGTTGCCTGTGGAATaGTTTGTAGAGTATGGAACCAGAGAGGAAGTATTA +
Preference number: 6 (lower is better)
Translates to: VMDTMTVPLPVE*FVEYGTREEVL
Trigger: TAATACTTCCTCTCTGGTTCCATACTCTACAAACAATTCCACAGGCAACGGTACTGTCATGGTATCCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp GTCTCAGTGAAAAACAGAGAGGAAGTCACCGGAGTGTaGAGAGTGGAAGCAGAGGTTTTTATATGTGTAAAA +
Preference number: 6 (lower is better)
Translates to: VSVKNREEVTGV*RVEAEVFICVK
Trigger: TTTTACACATATAAAAACCTCTGCTTCCACTCTCAACACTCCGGTGACTTCCTCTCTGTTTTTCACTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207509.2
CDS CAA 90 bp GGGATAATGGTGTGTTTGAGTTTGGGTGTTGAGCTTCCATTTTTCTaGTTTCCTTTTGTGACTGAGGAAACAGAGGTCATCTGTGAGATT +
Preference number: 6 (lower is better)
Translates to: GIMVCLSLGVELPFF*FPFVTEETEVICEI
Trigger: AATCTCACAGATGACCTCTGTTTCCTCAGTCACAAAAGGAAACAAGAAAAATGGAAGCTCAACACCCAAACTCAAACACACCATTATCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp ATCTTGAGTACTTGGTGGAGATTCCAGTGGAAGTGTCCTCTGATATaGAATGGTGTAACTTGGAAAGGAATGTACTGCCAGCAGATATAT +
Preference number: 6 (lower is better)
Translates to: ILSTWWRFQWKCPLI*NGVTWKGMYCQQIY
Trigger: ATATATCTGCTGGCAGTACATTCCTTTCCAAGTTACACCATTCAATATCAGAGGACACTTCCACTGGAATCTCCACCAAGTACTCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp ATGTCTGTGTTCCACTGTGTTGGGTCTCTGTGTTTGAAGAAGTGGTaGATAGATCTTTGGAAGTTACCATGTTTGATGTCACCACAGTAT +
Preference number: 6 (lower is better)
Translates to: MSVFHCVGSLCLKKW*IDLWKLPCLMSPQY
Trigger: ATACTGTGGTGACATCAAACATGGTAACTTCCAAAGATCTATCAACCACTTCTTCAAACACAGAGACCCAACACAGTGGAACACAGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp GTGGCTGTGGACACCTTGGAATCTAATTCAACTTGTGAAGCATTTTaGGTTGTCTTGGCAATAGCTGAAGTAATCTCTAAAGCATGGGTA +
Preference number: 6 (lower is better)
Translates to: VAVDTLESNSTCEAF*VVLAIAEVISKAWV
Trigger: TACCCATGCTTTAGAGATTACTTCAGCTATTGCCAAGACAACCAAAAATGCTTCACAAGTTGAATTAGATTCCAAGGTGTCCACAGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp ATGCCTAGGGAAACAGCTAGAGTTGTAATGACCGACTGGCTTTCTTaGCCTGTGGTAGTGTCCAGTGATTGTTTTATTTTTGTTATACCT +
Preference number: 6 (lower is better)
Translates to: MPRETARVVMTDWLS*PVVVSSDCFIFVIP
Trigger: AGGTATAACAAAAATAAAACAATCACTGGACACTACCACAGGCAAAGAAAGCCAGTCGGTCATTACAACTCTAGCTGTTTCCCTAGGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp ATGTCCCTCTCTAGGGTAATATATTCTGAAGATGTTGGGTCTGTGTaGTTAAGGTTCCAGTTGATGATGCAGAAGTTTAGCTGGTACTTG +
Preference number: 6 (lower is better)
Translates to: MSLSRVIYSEDVGSV*LRFQLMMQKFSWYL
Trigger: CAAGTACCAGCTAAACTTCTGCATCATCAACTGGAACCTTAACAACACAGACCCAACATCTTCAGAATATATTACCCTAGAGAGGGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp CAGGCTATTCAAGATCCTCTCTGTGTTGTTGAATATTTCAGATCCTaGAAATGCCATACCCTCTGTATGCTGCAGGTTGGTTATAGTGAA +
Preference number: 6 (lower is better)
Translates to: QAIQDPLCVVEYFRS*KCHTLCMLQVGYSE
Trigger: TTCACTATAACCAACCTGCAGCATACAGAGGGTATGGCATTTCAAGGATCTGAAATATTCAACAACACAGAGAGGATCTTGAATAGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207509.2
ENSMUST00000207857.2
CDS CAA 90 bp TTGAAGGAATGTTACTTCTCCAATGTAAAGTTGAAGCAGTCACTGTaGTGCTTGTGTCCAACTTTCTTGTGTTTGTCTTGGGTATTGGTC +
Preference number: 6 (lower is better)
Translates to: LKECYFSNVKLKQSL*CLCPTFLCLSWVLV
Trigger: GACCAATACCCAAGACAAACACAAGAAAGTTGGACACAAGCACAACAGTGACTGCTTCAACTTTACATTGGAGAAGTAACATTCCTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp TCATGTTCAGATGAGATTGGTGTAGGGATAATGGTGTGTTTGAGTTaGGGTGTTGAGCTTCCATTTTTCTTGTTTCCTTTTGTGACTGAG +
Preference number: 6 (lower is better)
Translates to: SCSDEIGVGIMVCLS*GVELPFFLFPFVTE
Trigger: CTCAGTCACAAAAGGAAACAAGAAAAATGGAAGCTCAACACCCAAACTCAAACACACCATTATCCCTACACCAATCTCATCTGAACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp AAGTTGAGAGTAATGGATACCATGACAGTACCGTTGCCTGTGGAATaGTTTGTAGAGTATGGAACCAGAGAGGAAGTATTATGGAAGATA +
Preference number: 6 (lower is better)
Translates to: KLRVMDTMTVPLPVE*FVEYGTREEVLWKI
Trigger: TATCTTCCATAATACTTCCTCTCTGGTTCCATACTCTACAAACAATTCCACAGGCAACGGTACTGTCATGGTATCCATTACTCTCAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS TCA 72 bp TGCAGGGTTGATGTTAGTAGAATTAACCATGGATTCTaGAAGTGTAAATGTCTGTGTTCCACTGTGTTGGGT +
Preference number: 6 (lower is better)
Translates to: CRVDVSRINHGF*KCKCLCSTVLG
Trigger: ACCCAACACAGTGGAACACAGACATTTACACTTTCAGAATCCATGGTTAATTCTACTAACATCAACCCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TGTATTCTGTGCTTGTGTTTATCTGTTCAGATGTACTaGAATCTGTCCATGCTGTCCTCAAGGGGAAAGATA +
Preference number: 6 (lower is better)
Translates to: CILCLCLSVQMY*NLSMLSSRGKI
Trigger: TATCTTTCCCCTTGAGGACAGCATGGACAGATTTCAGTACATCTGAACAGATAAACACAAGCACAGAATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GTTGCACTTGTGTCTTGTCCATTTGAGTTTGTTTCATaGATAGAAGTTACTAGTGCAGCCAGGAAATCAAGG +
Preference number: 6 (lower is better)
Translates to: VALVSCPFEFVS*IEVTSAARKSR
Trigger: CCTTGATTTCCTGGCTGCACTAGTAACTTCTATTCATGAAACAAACTCAAATGGACAAGACACAAGTGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GTGGTGATGTTGGATGATTCCTCAACATTAACTACTTaGCTGATGTCAGTCCTTGGAAAGAAAAGTGTAGAG +
Preference number: 6 (lower is better)
Translates to: VVMLDDSSTLTT*LMSVLGKKSVE
Trigger: CTCTACACTTTTCTTTCCAAGGACTGACATCAGTCAAGTAGTTAATGTTGAGGAATCATCCAACATCACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GATTGTGTCATTTTTGTTATAGCTGAAGACACACCTTaGGTAGACTCAGATAAACTGGTCTGTTCCCCAGTT +
Preference number: 6 (lower is better)
Translates to: DCVIFVIAEDTP*VDSDKLVCSPV
Trigger: AACTGGGGAACAGACCAGTTTATCTGAGTCTACTCAAGGTGTGTCTTCAGCTATAACAAAAATGACACAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TCTCCAGCATGGGTGATCTGTGTATCAGAAGAAGTTTaGTTCTTAGTTAATGAATTCACCATCTCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: SPAWVICVSEEV*FLVNEFTISGA
Trigger: TGCTCCTGAGATGGTGAATTCATTAACTAAGAATCAAACTTCTTCTGATACACAGATCACCCATGCTGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp ATGAAGTCATTGCATAACTTTTTGAGCTTAAGTCAGTaGACTCTGATGGTGTCACTACTGTTATCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: MKSLHNFLSLSQ*TLMVSLLLSWE
Trigger: CTCCCAGGATAACAGTAGTGACACCATCAGAGTTCACTGACTTAAGCTCAAAAAGTTATGCAATGACTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TCAGAATTAGTGTTCCATAATGTCTTAGATTCTGCTTaGCCTGGTGAAGCAGGCAAAGTTGAAGTCATTGCA +
Preference number: 6 (lower is better)
Translates to: SELVFHNVLDSA*PGEAGKVEVIA
Trigger: TGCAATGACTTCAACTTTGCCTGCTTCACCAGGTCAAGCAGAATCTAAGACATTATGGAACACTAATTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TCTGAGGAAATAACTGTTGGTGAGGTCATCATTTCCTaGACAACAGATGAAATGGTAGAAGATAAAGGCCCA +
Preference number: 6 (lower is better)
Translates to: SEEITVGEVIIS*TTDEMVEDKGP
Trigger: TGGGCCTTTATCTTCTACCATTTCATCTGTTGTTCAGGAAATGATGACCTCACCAACAGTTATTTCCTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp AGTTTTGGTTTAAATTCTGGTATACTTGGCAAGACATaGAAAGTAGACATTATTGACGTGGGTTGCCCCACA +
Preference number: 6 (lower is better)
Translates to: SFGLNSGILGKT*KVDIIDVGCPT
Trigger: TGTGGGGCAACCCACGTCAATAATGTCTACTTTGCATGTCTTGCCAAGTATACCAGAATTTAAACCAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS GCA 72 bp TATATTCAGTGGCACATAGCCACTAGATGTAGTTTCTaGAGTCTGGTGAGTGTAACCATTGACATAGATACT +
Preference number: 6 (lower is better)
Translates to: YIQWHIATRCSF*SLVSVTIDIDT
Trigger: AGTATCTATGTCAATGGTTACACTCACCAGACTGCAGAAACTACATCTAGTGGCTATGTGCCACTGAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CCA 72 bp GGGTCTCTGTGTTTGAAGAAGTGGTTGATAGATCTTTaGAAGTTACCATGTTTGATGTCACCACAGTATGTT +
Preference number: 6 (lower is better)
Translates to: GSLCLKKWLIDL*KLPCLMSPQYV
Trigger: AACATACTGTGGTGACATCAAACATGGTAACTTCCAAAGATCTATCAACCACTTCTTCAAACACAGAGACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GATTCTGAAAGTGTAAATGTCTGTGTTCCACTGTGTTaGGTCTCTGTGTTTGAAGAAGTGGTTGATAGATCT +
Preference number: 6 (lower is better)
Translates to: DSESVNVCVPLC*VSVFEEVVDRS
Trigger: AGATCTATCAACCACTTCTTCAAACACAGAGACCCAACACAGTGGAACACAGACATTTACACTTTCAGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp ATAGTTTCTATAGAATTCACAGAGGAAGTTGCTTCATaGAGTGGAGAGTCTGTCCATGAGAGTAACTCAGAA +
Preference number: 6 (lower is better)
Translates to: IVSIEFTEEVAS*SGESVHESNSE
Trigger: TTCTGAGTTACTCTCATGGACAGACTCTCCACTCCATGAAGCAACTTCCTCTGTGAATTCTATAGAAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TCTGTGGTAATAGAGGAGAAGCAGAAGCAGAAATCTTaGTTGGTATTATCAACAAGGAAGAGGCAGTACTAT +
Preference number: 6 (lower is better)
Translates to: SVVIEEKQKQKS*LVLSTRKRQYY
Trigger: ATAGTACTGCCTCTTCCTTGTTGATAATACCAACCAAGATTTCTGCTTCTGCTTCTCCTCTATTACCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp ACCAGTGATGTTATGGTGTGCACATTCGAAGAAGTATaGTTCCAAGATTTTGAGATCATCATGTCTGGAACA +
Preference number: 6 (lower is better)
Translates to: TSDVMVCTFEEV*FQDFEIIMSGT
Trigger: TGTTCCAGACATGATGATCTCAAAATCTTGGAACCATACTTCTTCGAATGTGCACACCATAACATCACTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TTCTCCAATGTAAAGTTGAAGCAGTCACTGTTGTGCTaGTGTCCAACTTTCTTGTGTTTGTCTTGGGTATTG +
Preference number: 6 (lower is better)
Translates to: FSNVKLKQSLLC*CPTFLCLSWVL
Trigger: CAATACCCAAGACAAACACAAGAAAGTTGGACACAAGCACAACAGTGACTGCTTCAACTTTACATTGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TGTTACTTCTCCAATGTAAAGTTGAAGCAGTCACTGTaGTGCTTGTGTCCAACTTTCTTGTGTTTGTCTTGG +
Preference number: 6 (lower is better)
Translates to: CYFSNVKLKQSL*CLCPTFLCLSW
Trigger: CCAAGACAAACACAAGAAAGTTGGACACAAGCACAACAGTGACTGCTTCAACTTTACATTGGAGAAGTAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp CAAAGATTATGTGTCTGTGGTCCTGAAGTAATATTTTaGGGAGGATCCATGGCTTCTGGATGTGGAAATGTT +
Preference number: 6 (lower is better)
Translates to: QRLCVCGPEVIF*GGSMASGCGNV
Trigger: AACATTTCCACATCCAGAAGCCATGGATCCTCCCAAAAATATTACTTCAGGACCACAGACACATAATCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TGGGTCTCTGTGTTTGAAGAAGTGGTTGATAGATCTTaGGAAGTTACCATGTTTGATGTCACCACAGTATGT +
Preference number: 6 (lower is better)
Translates to: WVSVFEEVVDRS*EVTMFDVTTVC
Trigger: ACATACTGTGGTGACATCAAACATGGTAACTTCCAAAGATCTATCAACCACTTCTTCAAACACAGAGACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TTTTCAAGTGAGACTGATATAGGTGTGATAGCATGTTaGAAAGTGCTCTTTTTCATGCCTTCCACTGATCCG +
Preference number: 6 (lower is better)
Translates to: FSSETDIGVIAC*KVLFFMPSTDP
Trigger: CGGATCAGTGGAAGGCATGAAAAAGAGCACTTTCAAACATGCTATCACACCTATATCAGTCTCACTTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp AATTGCCCAGTGGGCTTCCTTTTAGAGTTGAAAAGGTaGCAATTGATGGGACTTCATAACTTTGGCTTACAA +
Preference number: 6 (lower is better)
Translates to: NCPVGFLLELKR*QLMGLHNFGLQ
Trigger: TTGTAAGCCAAAGTTATGAAGTCCCATCAATTGCAACCTTTTCAACTCTAAAAGGAAGCCCACTGGGCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GTTCTGCCAGCTCTAATGGATTCTGAAACAGAAAATTaGGGTTGGGGTATAGAACTGCTGACTTCTGTAATT +
Preference number: 6 (lower is better)
Translates to: VLPALMDSETEN*GWGIELLTSVI
Trigger: AATTACAGAAGTCAGCAGTTCTATACCCCAACCCAAATTTTCTGTTTCAGAATCCATTAGAGCTGGCAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp AATCAGTATCTTCAGACCTGGTGGTTTCCTGTTCTATaGAAGTTATGGGGAAAGCTTTCTGAGTTTCTGCAT +
Preference number: 6 (lower is better)
Translates to: NQYLQTWWFPVL*KLWGKLSEFLH
Trigger: ATGCAGAAACTCAGAAAGCTTTCCCCATAACTTCAATAGAACAGGAAACCACCAGGTCTGAAGATACTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GAAACAGCTAGAGTTGTAATGACCGACTGGCTTTCTTaGCCTGTGGTAGTGTCCAGTGATTGTTTTATTTTT +
Preference number: 6 (lower is better)
Translates to: ETARVVMTDWLS*PVVVSSDCFIF
Trigger: AAAAATAAAACAATCACTGGACACTACCACAGGCAAAGAAAGCCAGTCGGTCATTACAACTCTAGCTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp AAGTTCTTTCTTTCTCTGATTGGGTTACCCATGCAGTaGTTAATTCTTCTTGACCTGCAGAAACATCCAGAG +
Preference number: 6 (lower is better)
Translates to: KFFLSLIGLPMQ*LILLDLQKHPE
Trigger: CTCTGGATGTTTCTGCAGGTCAAGAAGAATTAACAACTGCATGGGTAACCCAATCAGAGAAAGAAAGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TATAAGGGGCCAACACTGGTTTTACTGAATAATGCTTaGAGCAGTTTCTGCAAGATTCTTTCAGTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: YKGPTLVLLNNA*SSFCKILSVVL
Trigger: CAACACCACTGAAAGAATCTTGCAGAAACTGCTCAAAGCATTATTCAGTAAAACCAGTGTTGGCCCCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp GCTGAGCCATTGTTCATATGTGCTGAATATGGAAGATaGGAAATAGTGAAGCTGACTGTGACAGTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: AEPLFICAEYGR*EIVKLTVTVFK
Trigger: TTTGAAGACTGTCACAGTCAGCTTCACTATTTCCAATCTTCCATATTCAGCACATATGAACAATGGCTCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp TTTTCATTAAATCAGTATCTTCAGACCTGGTGGTTTCCTGTTCTATaGAAGTTATGGGGAAAGCTTTCTGAGTTTCTGCATGTACAGGAC +
Preference number: 6 (lower is better)
Translates to: FSLNQYLQTWWFPVL*KLWGKLSEFLHVQD
Trigger: GTCCTGTACATGCAGAAACTCAGAAAGCTTTCCCCATAACTTCAATAGAACAGGAAACCACCAGGTCTGAAGATACTGATTTAATGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp GACACCTTGGAATCTAATTCAACTTGTGAAGCATTTTTGGTTGTCTaGGCAATAGCTGAAGTAATCTCTAAAGCATGGGTAATCCATGAG +
Preference number: 6 (lower is better)
Translates to: DTLESNSTCEAFLVV*AIAEVISKAWVIHE
Trigger: CTCATGGATTACCCATGCTTTAGAGATTACTTCAGCTATTGCCAAGACAACCAAAAATGCTTCACAAGTTGAATTAGATTCCAAGGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp TTGGAGACAAAGACACAGTGGTATGGTGGCTTTCTATACCCAAATTaGTACTCAGTGATGTCAATTTTGGTATACTTGGAGAAAATGCTG +
Preference number: 6 (lower is better)
Translates to: LETKTQWYGGFLYPN*YSVMSILVYLEKML
Trigger: CAGCATTTTCTCCAAGTATACCAAAATTGACATCACTGAGTACAAATTTGGGTATAGAAAGCCACCATACCACTGTGTCTTTGTCTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp CCATTGCTCATATTTGATAAATATGGAAGGTTGGATATGGTGAAGTaGATTGTAAGAATCTTTAGATGGTGCCCTGTGGTAGGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: PLLIFDKYGRLDMVK*IVRIFRWCPVVGSG
Trigger: TCCAGAACCTACCACAGGGCACCATCTAAAGATTCTTACAATCAACTTCACCATATCCAACCTTCCATATTTATCAAATATGAGCAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp AAGTATTGCACGACACTCTCTGTTGAGTTAAACATGGCTGAGCCATaGCTCATATTTGATAAATATGGAAGGTTGGATATGGTGAAGTTG +
Preference number: 6 (lower is better)
Translates to: KYCTTLSVELNMAEP*LIFDKYGRLDMVKL
Trigger: CAACTTCACCATATCCAACCTTCCATATTTATCAAATATGAGCAATGGCTCAGCCATGTTTAACTCAACAGAGAGTGTCGTGCAATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS GCA 72 bp ATTTGTGGAACACCATGTGAAATAGTGGTAGATAAATaGCCAGAAGTGGCTTCCATTTCAGAATTACTGTTC +
Preference number: 6 (lower is better)
Translates to: ICGTPCEIVVDK*PEVASISELLF
Trigger: GAACAGTAATTCTGAAATGGAAGCCACTTCTGGGCATTTATCTACCACTATTTCACATGGTGTTCCACAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GGTTCAAGAAGAGAAAGATTCATGGGCACTTCAGTATaGTTGAGACTATACTCTGTGATTAAATCCACTTCT +
Preference number: 6 (lower is better)
Translates to: GSRRERFMGTSV*LRLYSVIKSTS
Trigger: AGAAGTGGATTTAATCACAGAGTATAGTCTCAACCATACTGAAGTGCCCATGAATCTTTCTCTTCTTGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GATGAGATTGGTGTAGGGATAATGGTGTGTTTGAGTTaGGGTGTTGAGCTTCCATTTTTCTTGTTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: DEIGVGIMVCLS*GVELPFFLFPF
Trigger: AAAAGGAAACAAGAAAAATGGAAGCTCAACACCCAAACTCAAACACACCATTATCCCTACACCAATCTCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GATGTTAAGGAAGATTCATTAAGATATCCTGGAGAATaGCCCAGTGGGCTTCCTTTTAGAGTTGAAAAGGTT +
Preference number: 6 (lower is better)
Translates to: DVKEDSLRYPGE*PSGLPFRVEKV
Trigger: AACCTTTTCAACTCTAAAAGGAAGCCCACTGGGCAATTCTCCAGGATATCTTAATGAATCTTCCTTAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GAGGTTCTGGTGTCCTTTGAAATTGCTAGTTCACTATaGCTCCAGCTTGGAAATGAAGTTTTAAAGAAAGCT +
Preference number: 6 (lower is better)
Translates to: EVLVSFEIASSL*LQLGNEVLKKA
Trigger: AGCTTTCTTTAAAACTTCATTTCCAAGCTGGAGCAATAGTGAACTAGCAATTTCAAAGGACACCAGAACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TGGTGTGCACATTCGAAGAAGTATGGTTCCAAGATTTaGAGATCATCATGTCTGGAACATTTGATGTTGTGT +
Preference number: 6 (lower is better)
Translates to: WCAHSKKYGSKI*RSSCLEHLMLC
Trigger: ACACAACATCAAATGTTCCAGACATGATGATCTCAAAATCTTGGAACCATACTTCTTCGAATGTGCACACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TTCTTAGTTATTGAAGTCATTGTAGCTGGAGAACTGTaGGAGATGGTTGTTGATAGTACTTCTGAAGTCCCT +
Preference number: 6 (lower is better)
Translates to: FLVIEVIVAGEL*EMVVDSTSEVP
Trigger: AGGGACTTCAGAAGTACTATCAACAACCATCTCCAACAGTTCTCCAGCTACAATGACTTCAATAACTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp ATGATATTGTGGTATGTTCAGAAGGATTATGAGTTTTaGAGGCCATCAAGTCTGGAATACTGGGAGAGATGT +
Preference number: 6 (lower is better)
Translates to: MILWYVQKDYEF*RPSSLEYWERC
Trigger: ACATCTCTCCCAGTATTCCAGACTTGATGGCCTCAAAAACTCATAATCCTTCTGAACATACCACAATATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TATACTGGTGTTCTTAAACAAGGATCCAAGCAGGCCTaGCAGGATCTTTTCTATGGTGTTAAATTTCTTGGA +
Preference number: 6 (lower is better)
Translates to: YTGVLKQGSKQA*QDLFYGVKFLG
Trigger: TCCAAGAAATTTAACACCATAGAAAAGATCCTGCAAGGCCTGCTTGGATCCTTGTTTAAGAACACCAGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp AGAACAGTCTCAGTAGAGTTGAACACAGCTGAGCCATaGTTCATATGTGCTGAATATGGAAGATTGGAAATA +
Preference number: 6 (lower is better)
Translates to: RTVSVELNTAEP*FICAEYGRLEI
Trigger: TATTTCCAATCTTCCATATTCAGCACATATGAACAATGGCTCAGCTGTGTTCAACTCTACTGAGACTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 72 bp ACGACACTCTCTGTTGAGTTAAACATGGCTGAGCCATaGCTCATATTTGATAAATATGGAAGGTTGGATATG +
Preference number: 6 (lower is better)
Translates to: TTLSVELNMAEP*LIFDKYGRLDM
Trigger: CATATCCAACCTTCCATATTTATCAAATATGAGCAATGGCTCAGCCATGTTTAACTCAACAGAGAGTGTCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207857.2
ENSMUST00000208663.2
CDS CAA 90 bp TGTACAGGACTAGATAAGGGCATTGATGGGGAAATTGTGTCCCAATaGCTTTGTGAGATCATAATTTCTGTTATTCTTGATGGAACTGAA +
Preference number: 6 (lower is better)
Translates to: CTGLDKGIDGEIVSQ*LCEIIISVILDGTE
Trigger: TTCAGTTCCATCAAGAATAACAGAAATTATGATCTCACAAAGCAATTGGGACACAATTTCCCCATCAATGCCCTTATCTAGTCCTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GAGCAGTTATTGCAACATTTTCTGTGTCTGTGTCTGTaGACAGTGATGCTGTTAATTTTGTTATACTTGGAG +
Preference number: 6 (lower is better)
Translates to: EQLLQHFLCLCL*TVMLLILLYLE
Trigger: CTCCAAGTATAACAAAATTAACAGCATCACTGTTCACAGACACAGACACAGAAAATGTTGCAATAACTGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TCAGAAGGAATAACAGTTGGTGAGATCATCATTTGTTaGACACTAGTTGAAGTGGTGATAGATAAGACGTCT +
Preference number: 6 (lower is better)
Translates to: SEGITVGEIIIC*TLVEVVIDKTS
Trigger: AGACGTCTTATCTATCACCACTTCAACTAGTGTTCAACAAATGATGATCTCACCAACTGTTATTCCTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TTATTTACAGAAGTATCCTTAATTGAAGTCACTGAATaGCTTTGTATACCAGAGCTAGAGACCAGTGATGGC +
Preference number: 6 (lower is better)
Translates to: LFTEVSLIEVTE*LCIPELETSDG
Trigger: GCCATCACTGGTCTCTAGCTCTGGTATACAAAGTCATTCAGTGACTTCAATTAAGGATACTTCTGTAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GATTTTATTTCCAGTATGGTTGGGCCATGGTGTTGTTaGTACTGCTTGATCAATAGAAATATCCTGAGTAGA +
Preference number: 6 (lower is better)
Translates to: DFISSMVGPWCC*YCLINRNILSR
Trigger: TCTACTCAGGATATTTCTATTGATCAAGCAGTATCAACAACACCATGGCCCAACCATACTGGAAATAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp ATGAATGATGTTATGGTCTGTGTTTCAGAAGAAGTTTaGTTCTTAGTTACTGAAGTCATCACATCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: MNDVMVCVSEEV*FLVTEVITSGA
Trigger: GGCTCCTGATGTGATGACTTCAGTAACTAAGAATCAAACTTCTTCTGAAACACAGACCATAACATCATTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GGTATGGTGGCTTTCTATACCCAAATTTGTACTCAGTaGTGTCAATTTTGGTATACTTGGAGAAAATGCTGT +
Preference number: 6 (lower is better)
Translates to: GMVAFYTQICTQ*CQFWYTWRKCC
Trigger: ACAGCATTTTCTCCAAGTATACCAAAATTGACATCACTGAGTACAAATTTGGGTATAGAAAGCCACCATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp GATGTGACAAGAGAAAGAGTTGTGGGTACATTAGTCTaGCTAATTCTGTGTTCTTTTGTTGAATGTATGTCT +
Preference number: 6 (lower is better)
Translates to: DVTRERVVGTLV*LILCSFVECMS
Trigger: AGACATACATTCAACAAAAGAACACAGAATTAGCCAGACTAATGTACCCACAACTCTTTCTCTTGTCACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp CAGTTTTGGTGGAATTATAAGATTTTTGTGAGGTTCTaGTGTCCTTTGAAATTGCTAGTTCACTATTGCTCC +
Preference number: 6 (lower is better)
Translates to: QFWWNYKIFVRF*CPLKLLVHYCS
Trigger: GGAGCAATAGTGAACTAGCAATTTCAAAGGACACCAGAACCTCACAAAAATCTTATAATTCCACCAAAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CCA 72 bp TGCTCCATAGCTAGTGTCCAGTTTTGGTTTAAATTCTaGTATACTTGGCAAGACATGCAAAGTAGACATTAT +
Preference number: 6 (lower is better)
Translates to: CSIASVQFWFKF*YTWQDMQSRHY
Trigger: ATAATGTCTACTTTGCATGTCTTGCCAAGTATACCAGAATTTAAACCAAAACTGGACACTAGCTATGGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TATAAGATTTTTGTGAGGTTCTGGTGTCCTTTGAAATaGCTAGTTCACTATTGCTCCAGCTTGGAAATGAAG +
Preference number: 6 (lower is better)
Translates to: YKIFVRFWCPLK*LVHYCSSLEMK
Trigger: CTTCATTTCCAAGCTGGAGCAATAGTGAACTAGCAATTTCAAAGGACACCAGAACCTCACAAAAATCTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TGGAATTATAAGATTTTTGTGAGGTTCTGGTGTCCTTaGAAATTGCTAGTTCACTATTGCTCCAGCTTGGAA +
Preference number: 6 (lower is better)
Translates to: WNYKIFVRFWCP*KLLVHYCSSLE
Trigger: TTCCAAGCTGGAGCAATAGTGAACTAGCAATTTCAAAGGACACCAGAACCTCACAAAAATCTTATAATTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GGAAAACTAGTAGATGAGGTAATCATTTCTGAAACATaGGTTGTAATGCTAGTAGATAGAACTCCAGGAGTG +
Preference number: 6 (lower is better)
Translates to: GKLVDEVIISET*VVMLVDRTPGV
Trigger: CACTCCTGGAGTTCTATCTACTAGCATTACAACCAATGTTTCAGAAATGATTACCTCATCTACTAGTTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp GATTTTTGTGAGGTTCTGGTGTCCTTTGAAATTGCTAGTTCACTATaGCTCCAGCTTGGAAATGAAGTTTTAAAGAAAGCTAAGTTTGTG +
Preference number: 6 (lower is better)
Translates to: DFCEVLVSFEIASSL*LQLGNEVLKKAKFV
Trigger: CACAAACTTAGCTTTCTTTAAAACTTCATTTCCAAGCTGGAGCAATAGTGAACTAGCAATTTCAAAGGACACCAGAACCTCACAAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp CAGTTTTGGTGGAATTATAAGATTTTTGTGAGGTTCTGGTGTCCTTaGAAATTGCTAGTTCACTATTGCTCCAGCTTGGAAATGAAGTTT +
Preference number: 6 (lower is better)
Translates to: QFWWNYKIFVRFWCP*KLLVHYCSSLEMKF
Trigger: AAACTTCATTTCCAAGCTGGAGCAATAGTGAACTAGCAATTTCAAAGGACACCAGAACCTCACAAAAATCTTATAATTCCACCAAAACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 90 bp TATGGTGGCTTTCTATACCCAAATTTGTACTCAGTGATGTCAATTTaGGTATACTTGGAGAAAATGCTGTGGTGGTCCTATTTAAACTTG +
Preference number: 6 (lower is better)
Translates to: YGGFLYPNLYSVMSI*VYLEKMLWWSYLNL
Trigger: CAAGTTTAAATAGGACCACCACAGCATTTTCTCCAAGTATACCAAAATTGACATCACTGAGTACAAATTTGGGTATAGAAAGCCACCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TCTGGCAAGAATTGTTGTGAAATATTCATGTTCAGATaGGATTGGTGTAGGGATAATGGTGTGTTTGAGTTT +
Preference number: 6 (lower is better)
Translates to: SGKNCCEIFMFR*DWCRDNGVFEF
Trigger: AAACTCAAACACACCATTATCCCTACACCAATCTCATCTGAACATGAATATTTCACAACAATTCTTGCCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp GATAAAGAACTTGTTTGTGACTGTTCCTCAAAACTGTaGGACTCAGATATCCAAGATAAATGTGGAGATGTT +
Preference number: 6 (lower is better)
Translates to: DKELVCDCSSKL*DSDIQDKCGDV
Trigger: AACATCTCCACATTTATCTTGGATATCTGAGTCTCACAGTTTTGAGGAACAGTCACAAACAAGTTCTTTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TTTGAAGTTGCAATACCAAATTTACTAGTTGTAGAATaGTCAGGAAACACAGGAAGACTAGAGGACATAGTC +
Preference number: 6 (lower is better)
Translates to: FEVAIPNLLVVE*SGNTGRLEDIV
Trigger: GACTATGTCCTCTAGTCTTCCTGTGTTTCCTGATCATTCTACAACTAGTAAATTTGGTATTGCAACTTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GAATCTAATTCAACTTGTGAAGCATTTTTGGTTGTCTaGGCAATAGCTGAAGTAATCTCTAAAGCATGGGTA +
Preference number: 6 (lower is better)
Translates to: ESNSTCEAFLVV*AIAEVISKAWV
Trigger: TACCCATGCTTTAGAGATTACTTCAGCTATTGCCAAGACAACCAAAAATGCTTCACAAGTTGAATTAGATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GACACCTTGGAATCTAATTCAACTTGTGAAGCATTTTaGGTTGTCTTGGCAATAGCTGAAGTAATCTCTAAA +
Preference number: 6 (lower is better)
Translates to: DTLESNSTCEAF*VVLAIAEVISK
Trigger: TTTAGAGATTACTTCAGCTATTGCCAAGACAACCAAAAATGCTTCACAAGTTGAATTAGATTCCAAGGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp GTGTTATGGTCTTTGTTTCAGAAGAAGTTTGATTCTTaGTTATTGAAGTCATCATCTCTGGAGCACTTGTTG +
Preference number: 6 (lower is better)
Translates to: VLWSLFQKKFDS*LLKSSSLEHLL
Trigger: CAACAAGTGCTCCAGAGATGATGACTTCAATAACAAAGAATCAAACTTCTTCTGAAACAAAGACCATAACAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp ACAACAGATGAAATGGTAGAAGATAAAGGCCCAGAATaGGTTTCCATTTCAGAATTAGTGTTCCATAATGTC +
Preference number: 6 (lower is better)
Translates to: TTDEMVEDKGPE*VSISELVFHNV
Trigger: GACATTATGGAACACTAATTCTGAAATGGAAACCAATTCTGGGCCTTTATCTTCTACCATTTCATCTGTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp CCAAATTTGTACTCAGTGATGTCAATTTTGGTATACTaGGAGAAAATGCTGTGGTGGTCCTATTTAAACTTG +
Preference number: 6 (lower is better)
Translates to: PNLYSVMSILVY*EKMLWWSYLNL
Trigger: CAAGTTTAAATAGGACCACCACAGCATTTTCTCCAAGTATACCAAAATTGACATCACTGAGTACAAATTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp TTAGAAGGATTTGCAGATTTTGAGGTTTCCACCTCTTaGTTATTAGGTGATATTGTTGTAGTTAACACCCTT +
Preference number: 6 (lower is better)
Translates to: LEGFADFEVSTS*LLGDIVVVNTL
Trigger: AAGGGTGTTAACTACAACAATATCACCTAATAATCAAGAGGTGGAAACCTCAAAATCTGCAAATCCTTCTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS TCA 72 bp AGTAATGATATTATGGTCTGTCTATCAGAAGAAGTTTaGTTCTCATTTGTTGAGGTCATTATGTCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: SNDIMVCLSEEV*FSFVEVIMSGA
Trigger: TGCTCCAGACATAATGACCTCAACAAATGAGAATCAAACTTCTTCTGATAGACAGACCATAATATCATTACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2
CDS CAA 72 bp TGGTCTTTGTTTCAGAAGAAGTTTGATTCTTTGTTATaGAAGTCATCATCTCTGGAGCACTTGTTGAGATTA +
Preference number: 6 (lower is better)
Translates to: WSLFQKKFDSLL*KSSSLEHLLRL
Trigger: TAATCTCAACAAGTGCTCCAGAGATGATGACTTCAATAACAAAGAATCAAACTTCTTCTGAAACAAAGACCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208663.2