Pregenerated sensors for MUC13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022824Ensembl transcript IDs: ENSMUST00000023520.7, ENSMUST00000115044.8
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTTGCTGCCTGAGGAGGGACATCATCAAGGGAGAAGACGCCACCTaGTACCTTCTCCCTCCCTCAGCCTTCCGGCATAGCTTCCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: ICCLRRDIIKGEDAT*YLLPPSAFRHSFLG Trigger: GCCAAGGAAGCTATGCCGGAAGGCTGAGGGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCTTGATGATGTCCCTCCTCAGGCAGCAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR GCA 90 bp | CCAGGATCTATGTCTTGGGGATGGCAGCACCGGAGAGTACCCATTTaGTGCCTGAGGAGGGACATCATCAAGGGAGAAGACGCCACCTGC | + |
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Preference number: 1 (lower is better) Translates to: PGSMSWGWQHRRVPI*CLRRDIIKGEDATC Trigger: GCAGGTGGCGTCTTCTCCCTTGATGATGTCCCTCCTCAGGCAGCAAATGGGTACTCTCCGGTGCTGCCATCCCCAAGACATAGATCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR CCA 90 bp | CCTCTTGGGGTGAGGCCCTATCACAAGCAGCTAGCTGTTCAAGAGTaGCCAGAGTCCAGAGCTCAGGAGTGGCACTGCTCAGGGATGAGT | + |
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Preference number: 1 (lower is better) Translates to: PLGVRPYHKQLAVQE*PESRAQEWHCSGMS Trigger: ACTCATCCCTGAGCAGTGCCACTCCTGAGCTCTGGACTCTGGCCACTCTTGAACAGCTAGCTGCTTGTGATAGGGCCTCACCCCAAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR TCA 90 bp | CTATGTCTTGGGGATGGCAGCACCGGAGAGTACCCATTTGCTGCCTaGGGAGGGACATCATCAAGGGAGAAGACGCCACCTGCTACCTTC | + |
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Preference number: 1 (lower is better) Translates to: LCLGDGSTGEYPFAA*GGTSSREKTPPATF Trigger: GAAGGTAGCAGGTGGCGTCTTCTCCCTTGATGATGTCCCTCCTCAGGCAGCAAATGGGTACTCTCCGGTGCTGCCATCCCCAAGACATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR CCA 90 bp | CTGACTGCTGCTTTTGTGGCTTTCCCAGGATCTATGTCTTGGGGATaGCAGCACCGGAGAGTACCCATTTGCTGCCTGAGGAGGGACATC | + |
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Preference number: 1 (lower is better) Translates to: LTAAFVAFPGSMSWG*QHRRVPICCLRRDI Trigger: GATGTCCCTCCTCAGGCAGCAAATGGGTACTCTCCGGTGCTGCCATCCCCAAGACATAGATCCTGGGAAAGCCACAAAAGCAGCAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR GCA 90 bp | AGTGGACACCAGGCTCCTCTGTCAGAGTTCCAGATAGAAGGCCTGTaGTGTCACAGGGGCTTCACACTGACTGCTGCTTTTGTGGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: SGHQAPLSEFQIEGL*CHRGFTLTAAFVAF Trigger: GAAAGCCACAAAAGCAGCAGTCAGTGTGAAGCCCCTGTGACAGCACAGGCCTTCTATCTGGAACTCTGACAGAGGAGCCTGGTGTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR CCA 90 bp | TTCACACTGACTGCTGCTTTTGTGGCTTTCCCAGGATCTATGTCTTaGGGATGGCAGCACCGGAGAGTACCCATTTGCTGCCTGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: FTLTAAFVAFPGSMS*GWQHRRVPICCLRR Trigger: CCTCCTCAGGCAGCAAATGGGTACTCTCCGGTGCTGCCATCCCCAAGACATAGATCCTGGGAAAGCCACAAAAGCAGCAGTCAGTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR GCA 90 bp | GTTGGCAAACCACGCAGAGGAATGCTGGAGGTCAAACTTTGTCTCTaGCCATTTCTCCTTGTCCTTAAGACCGTAGCTTGGGTGGGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: VGKPRRGMLEVKLCL*PFLLVLKTVAWVGW Trigger: CCAGCCCACCCAAGCTACGGTCTTAAGGACAAGGAGAAATGGGCAGAGACAAAGTTTGACCTCCAGCATTCCTCTGCGTGGTTTGCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR TCA 90 bp | AAGAGTGGCCAGAGTCCAGAGCTCAGGAGTGGCACTGCTCAGGGATaGGTTATGAGGGTGCTCCCTCTAAGATTGGAAACGCTAAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: KSGQSPELRSGTAQG*VMRVLPLRLETLRV Trigger: AACTCTTAGCGTTTCCAATCTTAGAGGGAGCACCCTCATAACTCATCCCTGAGCAGTGCCACTCCTGAGCTCTGGACTCTGGCCACTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR TCA 90 bp | CTGTTTCTCCTCCCTGCTTTCCTACCAACTAACATCTCAAAGACTTaGATGTCCCCACAGAGGACAGAGCCAGTCCAAGCCTTCTTATTG | + |
|
Preference number: 1 (lower is better) Translates to: LFLLPAFLPTNISKT*MSPQRTEPVQAFLL Trigger: CAATAAGAAGGCTTGGACTGGCTCTGTCCTCTGTGGGGACATTCAAGTCTTTGAGATGTTAGTTGGTAGGAAAGCAGGGAGGAGAAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR TCA 90 bp | ATGAGTTATGAGGGTGCTCCCTCTAAGATTGGAAACGCTAAGAGTTaGCCCACCAGGAAAGAAAAGCCCCACACCAATTGCCATAGCATT | + |
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Preference number: 1 (lower is better) Translates to: MSYEGAPSKIGNAKS*PTRKEKPHTNCHSI Trigger: AATGCTATGGCAATTGGTGTGGGGCTTTTCTTTCCTGGTGGGTCAACTCTTAGCGTTTCCAATCTTAGAGGGAGCACCCTCATAACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTCAGCCTTCCGGCATAGCTTCCTTGGCCTCTCTCTACCTCCTATGCTCCGGCACTGCTCAGGGATaGGTTATGAGGGTGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LPQPSGIASLASLYLLCSGTAQG*VMRVLP Trigger: AGGGAGCACCCTCATAACTCATCCCTGAGCAGTGCC...GGAGCATAGGAGGTAGAGAGAGGCCAAGGAAGCTATGCCGGAAGGCTGAGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGAAGACGCCACCTGCTACCTTCTCCCTCCCTCAGCCTTCCGGCATAGCTCACACCCAGAGGGGTTaGCAAACCACGCAGAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: REKTPPATFSLPQPSGIAHTQRG*QTTQRN Trigger: ATTCCTCTGCGTGGTTTGCCAACCCCTCTGGGTGTG...AGCTATGCCGGAAGGCTGAGGGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR CAA 90 bp | CCCAGGATCTATGTCTTGGGGATGGCAGCACCGGAGAGTACCCATTaGCTGCCTGAGGAGGGACATCATCAAGGGAGAAGACGCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: PRIYVLGMAAPESTH*LPEEGHHQGRRRHL Trigger: CAGGTGGCGTCTTCTCCCTTGATGATGTCCCTCCTCAGGCAGCAAATGGGTACTCTCCGGTGCTGCCATCCCCAAGACATAGATCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTCAGCCTTCCGGCATAGCTTCCTTGGCCTCTCTCTACCTCCTATGCTCCTCCAGAGCTCAGGAGTaGCACTGCTCAGGGATGAGT | + |
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Preference number: 2 (lower is better) Translates to: LPQPSGIASLASLYLLCSSRAQE*HCSGMS Trigger: ACTCATCCCTGAGCAGTGCCACTCCTGAGCTCTGGA...GGAGCATAGGAGGTAGAGAGAGGCCAAGGAAGCTATGCCGGAAGGCTGAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGAAGACGCCACCTGCTACCTTCTCCCTCCCTCAGCCTTCCGGCATAGCTCTAGCTGTTCAAGAGTaGCCAGAGTCCAGAGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: REKTPPATFSLPQPSGIALAVQE*PESRAQ Trigger: CTGAGCTCTGGACTCTGGCCACTCTTGAACAGCTAG...AGCTATGCCGGAAGGCTGAGGGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR TCA 90 bp | GACATGCTTCCATCTCTTGCCTGTCCTCTTGGGGTGAGGCCCTATCACAAGCAGGGCACTGCTCAGGGATaGGTTATGAGGGTGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: DMLPSLACPLGVRPYHKQGTAQG*VMRVLP Trigger: AGGGAGCACCCTCATAACTCATCCCTGAGCAGTGCC...CTGCTTGTGATAGGGCCTCACCCCAAGAGGACAGGCAAGAGATGGAAGCATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR GCA 90 bp | CATCATCAAGGGAGAAGACGCCACCTGCTACCTTCTCCCTCCCTCAGCCTTCCGGCTCAGGAGTGGCACTaGTCAGGGATGAGTTATGAG | + |
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Preference number: 2 (lower is better) Translates to: HHQGRRRHLLPSPSLSLPAQEWH*SGMSYE Trigger: CTCATAACTCATCCCTGAGCAGTGCCACTCCTGAGC...CGGAAGGCTGAGGGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCTTGATGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGAAGACGCCACCTGCTACCTTCTCCCTCCCTCAGCCTTCCGGCATAGCTGGAAACGCTAAGAGTTaGCCCACCAGGAAAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: REKTPPATFSLPQPSGIAGNAKS*PTRKEK Trigger: CTTTTCTTTCCTGGTGGGTCAACTCTTAGCGTTTCC...AGCTATGCCGGAAGGCTGAGGGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR CAA 90 bp | TCTTCGGCAAGCTTCGGTCTTCACACAGGTCCACACCCAGAGGGGTaGGCAAACCACGCAGAGGAATGCTGGAGGTCAAACTTTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SSASFGLHTGPHPEG*ANHAEECWRSNFVS Trigger: AGAGACAAAGTTTGACCTCCAGCATTCCTCTGCGTGGTTTGCCAACCCCTCTGGGTGTGGACCTGTGTGAAGACCGAAGCTTGCCGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR CAA 90 bp | CTTCACACTGACTGCTGCTTTTGTGGCTTTCCCAGGATCTATGTCTaGGGGATGGCAGCACCGGAGAGTACCCATTTGCTGCCTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LHTDCCFCGFPRIYV*GMAAPESTHLLPEE Trigger: CTCCTCAGGCAGCAAATGGGTACTCTCCGGTGCTGCCATCCCCAAGACATAGATCCTGGGAAAGCCACAAAAGCAGCAGTCAGTGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR GCA 90 bp | ACACCAGGCTCCTCTGTCAGAGTTCCAGATAGAAGGCCTGTGCTGTCACAGGGGAGAGTACCCATTTGCTaGCTGAGGAGGGACATCATC | + |
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Preference number: 2 (lower is better) Translates to: TPGSSVRVPDRRPVLSQGRVPIC*LRRDII Trigger: GATGATGTCCCTCCTCAGGCAGCAAATGGGTACTCT...CCCCTGTGACAGCACAGGCCTTCTATCTGGAACTCTGACAGAGGAGCCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCATCATGGAGCAGAGGTTCAGTGAAGCATCATTGAGTGGACACCAGGCTGGGCTTCACACTGACTaGTGCTTTTGTGGCTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: ASIMEQRFSEASLSGHQAGLHTD*CFCGFP Trigger: GGGAAAGCCACAAAAGCAGCAGTCAGTGTGAAGCCC...AGCCTGGTGTCCACTCAATGATGCTTCACTGAACCTCTGCTCCATGATGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR TCA 90 bp | GACATGCTTCCATCTCTTGCCTGTCCTCTTGGGGTGAGGCCCTATCACAAGCAGGGAAACGCTAAGAGTTaGCCCACCAGGAAAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: DMLPSLACPLGVRPYHKQGNAKS*PTRKEK Trigger: CTTTTCTTTCCTGGTGGGTCAACTCTTAGCGTTTCC...CTGCTTGTGATAGGGCCTCACCCCAAGAGGACAGGCAAGAGATGGAAGCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTAAGATTGGAAACGCTAAGAGTTGACCCACCAGGAAAGAAAAGCCCCACACACACCCAGAGGGGTTaGCAAACCACGCAGAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: PLRLETLRVDPPGKKSPTHTQRG*QTTQRN Trigger: ATTCCTCTGCGTGGTTTGCCAACCCCTCTGGGTGTG...TGTGGGGCTTTTCTTTCCTGGTGGGTCAACTCTTAGCGTTTCCAATCTTAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCTCCTCCCTGCTTTCCTACCAACTAACATCTCAAAGACTTGAATGTCCCCTTAAGACCGTAGCTTaGGTGGGCTGGGCTAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: CFSSLLSYQLTSQRLECPLKTVA*VGWARE Trigger: CTCCCTAGCCCAGCCCACCCAAGCTACGGTCTTAAG...GGGACATTCAAGTCTTTGAGATGTTAGTTGGTAGGAAAGCAGGGAGGAGAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR TCA 90 bp | GTATTTATATTTATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTGTCCTCTTGGGGTaGGGCCCTATCACAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VFIFIVCVCVCVCVCVCVPVLLG*GPITSS Trigger: GCTGCTTGTGATAGGGCCTCACCCCAAGAGGACAGG...CACACACACACACACACACACACACACACACACACACACGATAAATATAAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCCTGCTTTCCTACCAACTAACATCTCAAAGACTTGAATGTCCCCACAGAGCTCAGGAGTGGCACTaGTCAGGGATGAGTTATGAG | + |
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Preference number: 2 (lower is better) Translates to: SSLLSYQLTSQRLECPHRAQEWH*SGMSYE Trigger: CTCATAACTCATCCCTGAGCAGTGCCACTCCTGAGC...TCTGTGGGGACATTCAAGTCTTTGAGATGTTAGTTGGTAGGAAAGCAGGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGCATTCTGTACTAACTGGAGAAAATCAACTCTTACAAAGGCTCATAGGGTCGTAGCTTGGGTGGGCTaGGCTAGGGAGGGTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: IAFCTNWRKSTLTKAHRVVAWVG*AREGSK Trigger: TTTGGAACCCTCCCTAGCCCAGCCCACCCAAGCTAC...GACCCTATGAGCCTTTGTAAGAGTTGATTTTCTCCAGTTAGTACAGAATGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGCTTTTGTGGCTTTCCCAGGATCTATGTCTTGGGGATGGCAGCACCGGGCATTCTGTACTAACTaGAGAAAATCAACTCTTACA | + |
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Preference number: 2 (lower is better) Translates to: TAAFVAFPGSMSWGWQHRAFCTN*RKSTLT Trigger: TGTAAGAGTTGATTTTCTCCAGTTAGTACAGAATGC...CCGGTGCTGCCATCCCCAAGACATAGATCCTGGGAAAGCCACAAAAGCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR CCA 90 bp | ACACCAATTGCCATAGCATTCTGTACTAACTGGAGAAAATCAACTCTTACAAAGCTTAAGACCGTAGCTTaGGTGGGCTGGGCTAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TPIAIAFCTNWRKSTLTKLKTVA*VGWARE Trigger: CTCCCTAGCCCAGCCCACCCAAGCTACGGTCTTAAG...CTTTGTAAGAGTTGATTTTCTCCAGTTAGTACAGAATGCTATGGCAATTGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGAGGAGGGACATCATCAAGGGAGAAGACGCCACCTGCTACCTTCTCCCTCCCCACACCCAGAGGGGTaGGCAAACCACGCAGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: PEEGHHQGRRRHLLPSPSPHPEG*ANHAEE Trigger: TTCCTCTGCGTGGTTTGCCAACCCCTCTGGGTGTGG...GGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCTTGATGATGTCCCTCCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR TCA 72 bp | GGGGATGGCAGCACCGGAGAGTACCCATTTGCTGCCTaGGGAGGGACATCATCAAGGGAGAAGACGCCACCT | + |
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Preference number: 3 (lower is better) Translates to: GDGSTGEYPFAA*GGTSSREKTPP Trigger: AGGTGGCGTCTTCTCCCTTGATGATGTCCCTCCTCAGGCAGCAAATGGGTACTCTCCGGTGCTGCCATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR GCA 72 bp | CTGAGGAGGGACATCATCAAGGGAGAAGACGCCACCTaGTACCTTCTCCCTCCCTCAGCCTTCCGGCATAGC | + |
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Preference number: 3 (lower is better) Translates to: LRRDIIKGEDAT*YLLPPSAFRHS Trigger: GCTATGCCGGAAGGCTGAGGGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCTTGATGATGTCCCTCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTGGGACATGCTTCCATCTCTTGCCTGTCCTCTTGGGGTGAGGCCCTATCACCCACACCCAGAGGGGTaGGCAAACCACGCAGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SWDMLPSLACPLGVRPYHPHPEG*ANHAEE Trigger: TTCCTCTGCGTGGTTTGCCAACCCCTCTGGGTGTGG...GTGATAGGGCCTCACCCCAAGAGGACAGGCAAGAGATGGAAGCATGTCCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR GCA 72 bp | CAAGAGTGGCCAGAGTCCAGAGCTCAGGAGTGGCACTaGTCAGGGATGAGTTATGAGGGTGCTCCCTCTAAG | + |
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Preference number: 3 (lower is better) Translates to: QEWPESRAQEWH*SGMSYEGAPSK Trigger: CTTAGAGGGAGCACCCTCATAACTCATCCCTGAGCAGTGCCACTCCTGAGCTCTGGACTCTGGCCACTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCCCTCAGCCTTCCGGCATAGCTTCCTTGGCCTCTCTCTACCTCCTATGCGCTGGAGGTCAAACTTaGTCTCTGCCCATTTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SLPQPSGIASLASLYLLCAGGQT*SLPISP Trigger: AGGAGAAATGGGCAGAGACAAAGTTTGACCTCCAGC...GCATAGGAGGTAGAGAGAGGCCAAGGAAGCTATGCCGGAAGGCTGAGGGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR GCA 72 bp | GTCCTCCTGAGAAAGCTGGGACATGCTTCCATCTCTTaGCTGTCCTCTTGGGGTGAGGCCCTATCACAAGCA | + |
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Preference number: 3 (lower is better) Translates to: VLLRKLGHASIS*LSSWGEALSQA Trigger: TGCTTGTGATAGGGCCTCACCCCAAGAGGACAGGCAAGAGATGGAAGCATGTCCCAGCTTTCTCAGGAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR GCA 72 bp | ATGTCTTGGGGATGGCAGCACCGGAGAGTACCCATTTaGTGCCTGAGGAGGGACATCATCAAGGGAGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: MSWGWQHRRVPI*CLRRDIIKGED Trigger: GTCTTCTCCCTTGATGATGTCCCTCCTCAGGCAGCAAATGGGTACTCTCCGGTGCTGCCATCCCCAAGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR GCA 72 bp | AGGCCTGTGCTGTCACAGGGGCTTCACACTGACTGCTaGTTTTGTGGCTTTCCCAGGATCTATGTCTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: RPVLSQGLHTDC*FCGFPRIYVLG Trigger: CCCCAAGACATAGATCCTGGGAAAGCCACAAAAGCAGCAGTCAGTGTGAAGCCCCTGTGACAGCACAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR CCA 72 bp | GCTTTTGTGGCTTTCCCAGGATCTATGTCTTGGGGATaGCAGCACCGGAGAGTACCCATTTGCTGCCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: AFVAFPGSMSWG*QHRRVPICCLR Trigger: CCTCAGGCAGCAAATGGGTACTCTCCGGTGCTGCCATCCCCAAGACATAGATCCTGGGAAAGCCACAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR TCA 72 bp | CAGAGTCCAGAGCTCAGGAGTGGCACTGCTCAGGGATaGGTTATGAGGGTGCTCCCTCTAAGATTGGAAACG | + |
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Preference number: 3 (lower is better) Translates to: QSPELRSGTAQG*VMRVLPLRLET Trigger: CGTTTCCAATCTTAGAGGGAGCACCCTCATAACTCATCCCTGAGCAGTGCCACTCCTGAGCTCTGGACTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR GCA 72 bp | GAGGACAGAGCCAGTCCAAGCCTTCTTATTGTCATTTaGCTGGGTCCCCAAAGTCCTCCTGAGAAAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: EDRASPSLLIVI*LGPQSPPEKAG Trigger: CCCAGCTTTCTCAGGAGGACTTTGGGGACCCAGGCAAATGACAATAAGAAGGCTTGGACTGGCTCTGTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR CCA 72 bp | ACTGCTGCTTTTGTGGCTTTCCCAGGATCTATGTCTTaGGGATGGCAGCACCGGAGAGTACCCATTTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: TAAFVAFPGSMS*GWQHRRVPICC Trigger: GCAGCAAATGGGTACTCTCCGGTGCTGCCATCCCCAAGACATAGATCCTGGGAAAGCCACAAAAGCAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR TCA 72 bp | CCTCCATCATGGAGCAGAGGTTCAGTGAAGCATCATTaGGTGGACACCAGGCTCCTCTGTCAGAGTTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: PPSWSRGSVKHH*VDTRLLCQSSR Trigger: TCTGGAACTCTGACAGAGGAGCCTGGTGTCCACTCAATGATGCTTCACTGAACCTCTGCTCCATGATGGAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| 3UTR CCA 72 bp | CTCTGCCCATTTCTCCTTGTCCTTAAGACCGTAGCTTaGGTGGGCTGGGCTAGGGAGGGTTCCAAATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LCPFLLVLKTVA*VGWAREGSKFL Trigger: TAAGAATTTGGAACCCTCCCTAGCCCAGCCCACCCAAGCTACGGTCTTAAGGACAAGGAGAAATGGGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGCCACTGCTAAGCCTCCATCATGGAGCAGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVCVCV*PLLSLHHGAEV Trigger: AACCTCTGCTCCATGATGGAGGCTTAGCAGTGGCCACACACACACACACACACACACACACACACACACACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| 3UTR TCA 72 bp | GAGGGTGCTCCCTCTAAGATTGGAAACGCTAAGAGTTaGCCCACCAGGAAAGAAAAGCCCCACACCAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: EGAPSKIGNAKS*PTRKEKPHTNC Trigger: GCAATTGGTGTGGGGCTTTTCTTTCCTGGTGGGTCAACTCTTAGCGTTTCCAATCTTAGAGGGAGCACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| 3UTR TCA 72 bp | CTCCCTGCTTTCCTACCAACTAACATCTCAAAGACTTaGATGTCCCCACAGAGGACAGAGCCAGTCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LPAFLPTNISKT*MSPQRTEPVQA Trigger: GGCTTGGACTGGCTCTGTCCTCTGTGGGGACATTCAAGTCTTTGAGATGTTAGTTGGTAGGAAAGCAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| 3UTR CCA 72 bp | ACAGAGCCAGTCCAAGCCTTCTTATTGTCATTTGCCTaGGTCCCCAAAGTCCTCCTGAGAAAGCTGGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: TEPVQAFLLSFA*VPKVLLRKLGH Trigger: ATGTCCCAGCTTTCTCAGGAGGACTTTGGGGACCCAGGCAAATGACAATAAGAAGGCTTGGACTGGCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| 3UTR TCA 72 bp | TCTTATTGTCATTTGCCTGGGTCCCCAAAGTCCTCCTaGGAAAGCTGGGACATGCTTCCATCTCTTGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SYCHLPGSPKSS*ESWDMLPSLAC Trigger: ACAGGCAAGAGATGGAAGCATGTCCCAGCTTTCTCAGGAGGACTTTGGGGACCCAGGCAAATGACAATAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| 3UTR CCA 72 bp | AGCCCCACACCAATTGCCATAGCATTCTGTACTAACTaGAGAAAATCAACTCTTACAAAGGCTCATAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SPTPIAIAFCTN*RKSTLTKAHRV Trigger: GACCCTATGAGCCTTTGTAAGAGTTGATTTTCTCCAGTTAGTACAGAATGCTATGGCAATTGGTGTGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAAGACGCCACCTGCTACCTTCTCCCTCCCTCAGCCTTCCGGCATAGCTCTGTGGTGGGAGGACTaGTGCCACCAGAAGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: REKTPPATFSLPQPSGIALWWED*CHQKTM Trigger: CATCGTCTTCTGGTGGCACCAGTCCTCCCACCACAG...AGCTATGCCGGAAGGCTGAGGGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR TCA 90 bp | CATCATCAAGGGAGAAGACGCCACCTGCTACCTTCTCCCTCCCTCAGCCTTCCGTGGTGCCCACGATGGTaGGGATCAGCTGAAATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HHQGRRRHLLPSPSLSLPWCPRW*GSAEIG Trigger: ACCAATTTCAGCTGATCCTCACCATCGTGGGCACCA...CGGAAGGCTGAGGGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCTTGATGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| 3UTR CAA 72 bp | AGCTTCGGTCTTCACACAGGTCCACACCCAGAGGGGTaGGCAAACCACGCAGAGGAATGCTGGAGGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFGLHTGPHPEG*ANHAEECWRSN Trigger: GTTTGACCTCCAGCATTCCTCTGCGTGGTTTGCCAACCCCTCTGGGTGTGGACCTGTGTGAAGACCGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR TCA 90 bp | ACACCAGGCTCCTCTGTCAGAGTTCCAGATAGAAGGCCTGTGCTGTCACAGGGGTGGTCCGGGCTGAGATaGACTACCTGGAGATTGACT | + |
|
Preference number: 4 (lower is better) Translates to: TPGSSVRVPDRRPVLSQGWSGLR*TTWRLT Trigger: AGTCAATCTCCAGGTAGTTCATCTCAGCCCGGACCA...CCCCTGTGACAGCACAGGCCTTCTATCTGGAACTCTGACAGAGGAGCCTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCATTTCTCCTTGTCCTTAAGACCGTAGCTTGGGTGGGCTGGGCTAGGGAGTGGTGCCCACGATGGTaGGGATCAGCTGAAATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CPFLLVLKTVAWVGWAREWCPRW*GSAEIG Trigger: ACCAATTTCAGCTGATCCTCACCATCGTGGGCACCA...CTCCCTAGCCCAGCCCACCCAAGCTACGGTCTTAAGGACAAGGAGAAATGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCTCAGCCTTCCGGCATAGCTTCCTTGGCCTCTCTCTACCTCCTATGCTCCGAACTACCTGGAGATTaGCTTTGTACTGTGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPQPSGIASLASLYLLCSELPGD*LCTVVG Trigger: TCCCACCACAGTACAAAGTCAATCTCCAGGTAGTTC...GGAGCATAGGAGGTAGAGAGAGGCCAAGGAAGCTATGCCGGAAGGCTGAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| 3UTR CAA 72 bp | TATGTCTTGGGGATGGCAGCACCGGAGAGTACCCATTaGCTGCCTGAGGAGGGACATCATCAAGGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YVLGMAAPESTH*LPEEGHHQGRR Trigger: TCTTCTCCCTTGATGATGTCCCTCCTCAGGCAGCAAATGGGTACTCTCCGGTGCTGCCATCCCCAAGACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| 3UTR CAA 72 bp | GACTGCTGCTTTTGTGGCTTTCCCAGGATCTATGTCTaGGGGATGGCAGCACCGGAGAGTACCCATTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DCCFCGFPRIYV*GMAAPESTHLL Trigger: CAGCAAATGGGTACTCTCCGGTGCTGCCATCCCCAAGACATAGATCCTGGGAAAGCCACAAAAGCAGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| 3UTR CAA 72 bp | GCCTCCATCATGGAGCAGAGGTTCAGTGAAGCATCATaGAGTGGACACCAGGCTCCTCTGTCAGAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASIMEQRFSEAS*SGHQAPLSEFQ Trigger: CTGGAACTCTGACAGAGGAGCCTGGTGTCCACTCAATGATGCTTCACTGAACCTCTGCTCCATGATGGAGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCATTTCTCCTTGTCCTTAAGACCGTAGCTTGGGTGGGCTGGGCTAGGGAGAGTAGAGGCCTGAGATaGACTACCTGGAGATTGACT | + |
|
Preference number: 4 (lower is better) Translates to: CPFLLVLKTVAWVGWARESRGLR*TTWRLT Trigger: AGTCAATCTCCAGGTAGTTCATCTCAGGCCTCTACT...CTCCCTAGCCCAGCCCACCCAAGCTACGGTCTTAAGGACAAGGAGAAATGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGAGGGACATCATCAAGGGAGAAGACGCCACCTGCTACCTTCTCCCTCCGCTGAAATTGGTCTTTaGAATTCATCCCGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEEGHHQGRRRHLLPSPSAEIGL*NSSRCS Trigger: GCTACAGCGGGATGAATTGCAAAGACCAATTTCAGC...GGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCTTGATGATGTCCCTCCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCTCAGCCTTCCGGCATAGCTTCCTTGGCCTCTCTCTACCTCCTATGCTCCTCCTCAATCAGCCTCTaGTCTTCTCCATCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPQPSGIASLASLYLLCSSSISL*SSPSFF Trigger: AAAGAAGGATGGAGAAGAGCAGAGGCTGATTGAGGA...GGAGCATAGGAGGTAGAGAGAGGCCAAGGAAGCTATGCCGGAAGGCTGAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCACTGCTAAGCCTCCATCATGGAACAAAAAGGAACCTGTaGGTTCAGCCTGTCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVWPLLSLHHGTKRNL*VQPVQP Trigger: GGGCTGGACAGGCTGAACCCACAGGTTCCTTTTTGT...TCCATGATGGAGGCTTAGCAGTGGCCACACACACACACACACACACACACACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGCTTTTGTGGCTTTCCCAGGATCTATGTCTTGGGGATGGCAGCACCGGCCCGCTGTAGCCAAATaGACACTCTTCACACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAAFVAFPGSMSWGWQHRPAVAK*TLFTLP Trigger: AGGAAGTGTGAAGAGTGTCCATTTGGCTACAGCGGG...CCGGTGCTGCCATCCCCAAGACATAGATCCTGGGAAAGCCACAAAAGCAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR TCA 90 bp | ACACCAGGCTCCTCTGTCAGAGTTCCAGATAGAAGGCCTGTGCTGTCACAGGGGAGTAGAGACCTGAGATaGACTACCTGGAGATTGACT | + |
|
Preference number: 4 (lower is better) Translates to: TPGSSVRVPDRRPVLSQGSRDLR*TTWRLT Trigger: AGTCAATCTCCAGGTAGTTCATCTCAGGTCTCTACT...CCCCTGTGACAGCACAGGCCTTCTATCTGGAACTCTGACAGAGGAGCCTGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CCA 90 bp | CTGACTGCTGCTTTTGTGGCTTTCCCAGGATCTATGTCTTGGGGATGGCAGCACCCCGCTGTAGCCAAATaGACACTCTTCACACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTAAFVAFPGSMSWGWQHPAVAK*TLFTLP Trigger: AGGAAGTGTGAAGAGTGTCCATTTGGCTACAGCGGG...GTGCTGCCATCCCCAAGACATAGATCCTGGGAAAGCCACAAAAGCAGCAGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCCTTGTCCTTAAGACCGTAGCTTGGGTGGGCTGGGCTAGGGAGGGTTCCATGGTGAGGATCAGCTaGAATTGGTCTTTGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLVLKTVAWVGWAREGSMVRIS*NWSLQF Trigger: GAATTGCAAAGACCAATTTCAGCTGATCCTCACCAT...GGAACCCTCCCTAGCCCAGCCCACCCAAGCTACGGTCTTAAGGACAAGGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCTCAGCCTTCCGGCATAGCTTCCTTGGCCTCTCTCTACCTCCTATGCTCCGCCACTAGTCTTAATTaGAGTTTCGATTGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPQPSGIASLASLYLLCSATSLN*SFDCRR Trigger: TCTTCTGCAATCGAAACTGCAATTAAGACTAGTGGC...GGAGCATAGGAGGTAGAGAGAGGCCAAGGAAGCTATGCCGGAAGGCTGAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTAAGATTGGAAACGCTAAGAGTTGACCCACCAGGAAAGAAAAGCCCCACAACAAAAAGGAACCTGTaGGTTCAGCCTGTCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLRLETLRVDPPGKKSPTTKRNL*VQPVQP Trigger: GGGCTGGACAGGCTGAACCCACAGGTTCCTTTTTGT...TGTGGGGCTTTTCTTTCCTGGTGGGTCAACTCTTAGCGTTTCCAATCTTAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCCCTGCTTTCCTACCAACTAACATCTCAAAGACTTGAATGTCCCCACAGATGGTCCGGGCTGAGATaGACTACCTGGAGATTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSYQLTSQRLECPHRWSGLR*TTWRLT Trigger: AGTCAATCTCCAGGTAGTTCATCTCAGCCCGGACCA...TCTGTGGGGACATTCAAGTCTTTGAGATGTTAGTTGGTAGGAAAGCAGGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCCATCATGGAGCAGAGGTTCAGTGAAGCATCATTGAGTGGACACCAGGCTCAGAAGTGTTTGCTATaGAGCTTAACACAAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASIMEQRFSEASLSGHQAQKCLL*SLTQEA Trigger: TGCTTCTTGTGTTAAGCTGCATAGCAAACACTTCTG...AGCCTGGTGTCCACTCAATGATGCTTCACTGAACCTCTGCTCCATGATGGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR GCA 90 bp | ATAGAAGGCCTGTGCTGTCACAGGGGCTTCACACTGACTGCTGCTTTTGTGGCTGCCACTAGTCTTAATTaGAGTTTCGATTGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IEGLCCHRGFTLTAAFVAATSLN*SFDCRR Trigger: TCTTCTGCAATCGAAACTGCAATTAAGACTAGTGGC...AGCCACAAAAGCAGCAGTCAGTGTGAAGCCCCTGTGACAGCACAGGCCTTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCCCTGCTTTCCTACCAACTAACATCTCAAAGACTTGAATGTCCCCACAGAAGTAGAGGCCTGAGATaGACTACCTGGAGATTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSYQLTSQRLECPHRSRGLR*TTWRLT Trigger: AGTCAATCTCCAGGTAGTTCATCTCAGGCCTCTACT...TCTGTGGGGACATTCAAGTCTTTGAGATGTTAGTTGGTAGGAAAGCAGGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTCTCCTCCCTGCTTTCCTACCAACTAACATCTCAAAGACTTGAATGTCCCGAACTACCTGGAGATTaGCTTTGTACTGTGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CFSSLLSYQLTSQRLECPELPGD*LCTVVG Trigger: TCCCACCACAGTACAAAGTCAATCTCCAGGTAGTTC...GGGACATTCAAGTCTTTGAGATGTTAGTTGGTAGGAAAGCAGGGAGGAGAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR GCA 90 bp | GTATTTATATTTATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTCAATCAGCCTCTaGTCTTCTCCATCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFIFIVCVCVCVCVCVCVSSISL*SSPSFF Trigger: AAAGAAGGATGGAGAAGAGCAGAGGCTGATTGAGGA...CACACACACACACACACACACACACACACACACACACACGATAAATATAAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR GCA 90 bp | GTATTTATATTTATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGAAGTGTTTGCTATaGAGCTTAACACAAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFIFIVCVCVCVCVCVCVQKCLL*SLTQEA Trigger: TGCTTCTTGTGTTAAGCTGCATAGCAAACACTTCTG...CACACACACACACACACACACACACACACACACACACACGATAAATATAAATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCATTTCTCCTTGTCCTTAAGACCGTAGCTTGGGTGGGCTGGGCTAGGGAGTTGTCCGCTCCTAAGTaGGAGAAGCCGGTCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CPFLLVLKTVAWVGWARELSAPK*EKPVCL Trigger: GAGGCAGACCGGCTTCTCCAACTTAGGAGCGGACAA...CTCCCTAGCCCAGCCCACCCAAGCTACGGTCTTAAGGACAAGGAGAAATGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CAA 90 bp | ACACCAGGCTCCTCTGTCAGAGTTCCAGATAGAAGGCCTGTGCTGTCACAGGGGTTGTCCGCTCCTAAGTaGGAGAAGCCGGTCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TPGSSVRVPDRRPVLSQGLSAPK*EKPVCL Trigger: GAGGCAGACCGGCTTCTCCAACTTAGGAGCGGACAA...CCCCTGTGACAGCACAGGCCTTCTATCTGGAACTCTGACAGAGGAGCCTGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CAA 90 bp | CATCATCAAGGGAGAAGACGCCACCTGCTACCTTCTCCCTCCCTCAGCCTTCCGACCTGGAGATTGACTTaGTACTGTGGTGGGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: HHQGRRRHLLPSPSLSLPTWRLT*YCGGRT Trigger: AGTCCTCCCACCACAGTACAAAGTCAATCTCCAGGT...CGGAAGGCTGAGGGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCTTGATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CAA 90 bp | CTGACTGCTGCTTTTGTGGCTTTCCCAGGATCTATGTCTTGGGGATGGCAGCACCACCAGAAGGCTGAGTaGGTCCGGGCTGAGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTAAFVAFPGSMSWGWQHHQKAE*VRAEMN Trigger: GTTCATCTCAGCCCGGACCAACTCAGCCTTCTGGTG...GTGCTGCCATCCCCAAGACATAGATCCTGGGAAAGCCACAAAAGCAGCAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CAA 90 bp | ATAGAAGGCCTGTGCTGTCACAGGGGCTTCACACTGACTGCTGCTTTTGTGGCTCACCAGAAGGCTGAGTaGGTCCGGGCTGAGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IEGLCCHRGFTLTAAFVAHQKAE*VRAEMN Trigger: GTTCATCTCAGCCCGGACCAACTCAGCCTTCTGGTG...AGCCACAAAAGCAGCAGTCAGTGTGAAGCCCCTGTGACAGCACAGGCCTTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGGGACATGCTTCCATCTCTTGCCTGTCCTCTTGGGGTGAGGCCCTATCACACCTGGAGATTGACTTaGTACTGTGGTGGGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SWDMLPSLACPLGVRPYHTWRLT*YCGGRT Trigger: AGTCCTCCCACCACAGTACAAAGTCAATCTCCAGGT...GTGATAGGGCCTCACCCCAAGAGGACAGGCAAGAGATGGAAGCATGTCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGAAGACGCCACCTGCTACCTTCTCCCTCCCTCAGCCTTCCGGCATAGCTTCTCCATCCTTCTTTTaGTTCTTTGACCTCGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: REKTPPATFSLPQPSGIASPSFF*FFDLAE Trigger: CTCTGCGAGGTCAAAGAACAAAAAGAAGGATGGAGA...AGCTATGCCGGAAGGCTGAGGGAGGGAGAAGGTAGCAGGTGGCGTCTTCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS GCA 90 bp | TTGGGGAAGATGCTGTTGTCCGCTCCTAAGTTGGAGAAGCCGGTCTaGCTCAGTCGTAGGTTATGGAAGTCATCCTCAATCAGCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGKMLLSAPKLEKPV*LSRRLWKSSSISLC Trigger: GCAGAGGCTGATTGAGGATGACTTCCATAACCTACGACTGAGGCAGACCGGCTTCTCCAACTTAGGAGCGGACAACAGCATCTTCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCCTCAGCCTTCCGGCATAGCTTCCTTGGCCTCTCTCTACCTCCTATGCGAGGATCAGCTGAAATaGGTCTTTGCAATTCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLPQPSGIASLASLYLLCEDQLK*VFAIHP Trigger: GGGATGAATTGCAAAGACCAATTTCAGCTGATCCTC...GCATAGGAGGTAGAGAGAGGCCAAGGAAGCTATGCCGGAAGGCTGAGGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS TCA 90 bp | AGGACTGGTGCCACCAGAAGACGATGTTGTACTAGAGGCCTGAGATaGACTACCCACGGTCACCAAAAGGAGACTGAGAGAGAGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTGATRRRCCTRGLR*TTHGHQKETEREKQ Trigger: CTGCTTCTCTCTCTCAGTCTCCTTTTGGTGACCGTGGGTAGTTCATCTCAGGCCTCTAGTACAACATCGTCTTCTGGTGGCACCAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCTCAGCCTTCCGGCATAGCTTCCTTGGCCTCTCTCTACCTCCTATGCTCCACTGTTGTACAACTCTaGATAGCCCACAGAGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPQPSGIASLASLYLLCSTVVQL*IAHRVF Trigger: GAAAACTCTGTGGGCTATCAAGAGTTGTACAACAGT...GGAGCATAGGAGGTAGAGAGAGGCCAAGGAAGCTATGCCGGAAGGCTGAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGCTTTTGTGGCTTTCCCAGGATCTATGTCTTGGGGATGGCAGCACCGGGAGGATCAGCTGAAATaGGTCTTTGCAATTCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: TAAFVAFPGSMSWGWQHREDQLK*VFAIHP Trigger: GGGATGAATTGCAAAGACCAATTTCAGCTGATCCTC...CCGGTGCTGCCATCCCCAAGACATAGATCCTGGGAAAGCCACAAAAGCAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS-3UTR CAA 90 bp | GACATGCTTCCATCTCTTGCCTGTCCTCTTGGGGTGAGGCCCTATCACAAGCAGACTGTTGTACAACTCTaGATAGCCCACAGAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: DMLPSLACPLGVRPYHKQTVVQL*IAHRVF Trigger: GAAAACTCTGTGGGCTATCAAGAGTTGTACAACAGT...CTGCTTGTGATAGGGCCTCACCCCAAGAGGACAGGCAAGAGATGGAAGCATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCACTGCTAAGCCTCCATCATGGATCTCCATCCTTCTTTTaGTTCTTTGACCTCGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: VCVCVCVCVWPLLSLHHGSPSFF*FFDLAE Trigger: CTCTGCGAGGTCAAAGAACAAAAAGAAGGATGGAGA...TCCATGATGGAGGCTTAGCAGTGGCCACACACACACACACACACACACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS GCA 90 bp | AAAAAGGAACCTGTGGGTTCAGCCTGTCCAGCCCAGGTTTGCACGTaGATTGTAAAATGTCCTGGCATTTACTGCTGTCATTCCCTACAC | + |
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Preference number: 5 (lower is better) Translates to: KKEPVGSACPAQVCT*IVKCPGIYCCHSLH Trigger: GTGTAGGGAATGACAGCAGTAAATGCCAGGACATTTTACAATGCACGTGCAAACCTGGGCTGGACAGGCTGAACCCACAGGTTCCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS GCA 90 bp | CAACACAAAAAGGAACCTGTGGGTTCAGCCTGTCCAGCCCAGGTTTaGACGTGCATTGTAAAATGTCCTGGCATTTACTGCTGTCATTCC | + |
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Preference number: 5 (lower is better) Translates to: QHKKEPVGSACPAQV*TCIVKCPGIYCCHS Trigger: GGAATGACAGCAGTAAATGCCAGGACATTTTACAATGCACGTGCAAACCTGGGCTGGACAGGCTGAACCCACAGGTTCCTTTTTGTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS GCA 90 bp | GTCTGCCTCAGTCGTAGGTTATGGAAGTCATCCTCAATCAGCCTCTaGTCTTCTCCATCCTTCTTTTTGTTCTTTGACCTCGCAGAGACG | + |
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Preference number: 5 (lower is better) Translates to: VCLSRRLWKSSSISL*SSPSFFLFFDLAET Trigger: CGTCTCTGCGAGGTCAAAGAACAAAAAGAAGGATGGAGAAGAGCAGAGGCTGATTGAGGATGACTTCCATAACCTACGACTGAGGCAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS GCA 90 bp | TTACTCCGTTATCCATCTTTAAGCACTGCTCCTTCTCCTCTGCATTaGAGGGCTGAGAGCACGTTACAGCAACACAAAAAGGAACCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LLRYPSLSTAPSPLH*RAESTLQQHKKEPV Trigger: CACAGGTTCCTTTTTGTGTTGCTGTAACGTGCTCTCAGCCCTGCAATGCAGAGGAGAAGGAGCAGTGCTTAAAGATGGATAACGGAGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS-3UTR CAA 90 bp | GTATTTATATTTATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTACAGGGGTTAGGGTaGCAGAGATCACTGGGACCT | + |
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Preference number: 5 (lower is better) Translates to: VFIFIVCVCVCVCVCVCVLQGLG*QRSLGP Trigger: AGGTCCCAGTGATCTCTGCAACCCTAACCCCTGTAA...CACACACACACACACACACACACACACACACACACACACGATAAATATAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS TCA 90 bp | ATCCTCAATCAGCCTCTGCTCTTCTCCATCCTTCTTTTTGTTCTTTaGCCTCGCAGAGACGATAAAAGCAATCAGCAAGATGAGGATGAG | + |
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Preference number: 5 (lower is better) Translates to: ILNQPLLFSILLFVL*PRRDDKSNQQDEDE Trigger: CTCATCCTCATCTTGCTGATTGCTTTTATCGTCTCTGCGAGGTCAAAGAACAAAAAGAAGGATGGAGAAGAGCAGAGGCTGATTGAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS GCA 90 bp | GACATAGTCTTTCACATTGCCACTAGTCTTAATTGCAGTTTCGATTaGAGAAGATACACTCTTTTCAGTTTCTTTTGTGTCTGCTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: DIVFHIATSLNCSFD*RRYTLFSFFCVCSK Trigger: TTTGGAGCAGACACAAAAGAAACTGAAAAGAGTGTATCTTCTGCAATCGAAACTGCAATTAAGACTAGTGGCAATGTGAAAGACTATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS TCA 72 bp | GGCACCACCAGAAGGCTGAGTTGGTCCGGGCTGAGATaGACTACCTGGAGATTGACTCTGTACCGTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GTTRRLSWSGLR*TTWRLTLYRGG Trigger: CCCACCACGGTACAGAGTCAATCTCCAGGTAGTTCATCTCAGCCCGGACCAACTCAGCCTTCTGGTGGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS CAA 72 bp | GCACGGTGGAAGAGCTGGCACCACCAGAAGGCTGAGTaGGTCCGGGCTGAGATGAACTACCTGGAGATTGAC | + |
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Preference number: 6 (lower is better) Translates to: ARWKSWHHQKAE*VRAEMNYLEID Trigger: GTCAATCTCCAGGTAGTTCATCTCAGCCCGGACCAACTCAGCCTTCTGGTGGTGCCAGCTCTTCCACCGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS CCA 72 bp | CCTGAGATGAACTACCTGGAGATTGACTCTGTACCGTaGTGGGAGGACTGGCGCCACCAGAAGACGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: PEMNYLEIDSVP*WEDWRHQKTML Trigger: CAACATCGTCTTCTGGTGGCGCCAGTCCTCCCACCACGGTACAGAGTCAATCTCCAGGTAGTTCATCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS CCA 72 bp | GCTGAGATGAACTACCTGGAGATTGACTCTGTACCGTaGTGGGAGGACTGGCGCCACCAGAAGACGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: AEMNYLEIDSVP*WEDWRHQKTML Trigger: CAACATCGTCTTCTGGTGGCGCCAGTCCTCCCACCACGGTACAGAGTCAATCTCCAGGTAGTTCATCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS GCA 72 bp | GCCAAATGGACACTCTTCACACTTCCTGTTCCCGTTTaGCCTCTGGTAGCCCGGCATGCACACACAATCCAT | + |
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Preference number: 6 (lower is better) Translates to: AKWTLFTLPVPV*PLVARHAHTIH Trigger: ATGGATTGTGTGTGCATGCCGGGCTACCAGAGGGCAAACGGGAACAGGAAGTGTGAAGAGTGTCCATTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS CCA 72 bp | CTGAGAGCACGTTACAGCAACACAAAAAGGAACCTGTaGGTTCAGCCTGTCCAGCCCAGGTTTGCACGTGCA | + |
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Preference number: 6 (lower is better) Translates to: LRARYSNTKRNL*VQPVQPRFARA Trigger: TGCACGTGCAAACCTGGGCTGGACAGGCTGAACCCACAGGTTCCTTTTTGTGTTGCTGTAACGTGCTCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS CAA 72 bp | AGCCAAATGGACACTCTTCACACTTCCTGTTCCCGTTaGCCCTCTGGTAGCCCGGCATGCACACACAATCCA | + |
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Preference number: 6 (lower is better) Translates to: SQMDTLHTSCSR*PSGSPACTHNP Trigger: TGGATTGTGTGTGCATGCCGGGCTACCAGAGGGCAAACGGGAACAGGAAGTGTGAAGAGTGTCCATTTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS CAA 72 bp | CTGACTTTGGGGAAGATGCTGTTGTCCGCTCCTAAGTaGGAGAAGCCGGTCTGCCTCAGTCGTAGGTTATGG | + |
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Preference number: 6 (lower is better) Translates to: LTLGKMLLSAPK*EKPVCLSRRLW Trigger: CCATAACCTACGACTGAGGCAGACCGGCTTCTCCAACTTAGGAGCGGACAACAGCATCTTCCCCAAAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS TCA 72 bp | GCCACCAGAAGACGATGTTGTAGTAGAGGCCTGAGATaGACTACCTGGAGATTGACTCTGTACCGTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: ATRRRCCSRGLR*TTWRLTLYRGG Trigger: CCCACCACGGTACAGAGTCAATCTCCAGGTAGTTCATCTCAGGCCTCTACTACAACATCGTCTTCTGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS TCA 72 bp | GCCACCAGAAGACGATGTTGTACTAGAGGCCTGAGATaGACTACCCACGGTCACCAAAAGGAGACTGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: ATRRRCCTRGLR*TTHGHQKETER Trigger: TCTCTCAGTCTCCTTTTGGTGACCGTGGGTAGTTCATCTCAGGCCTCTAGTACAACATCGTCTTCTGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS TCA 72 bp | GCCACCAGAAGACGATGTTGTAGTAGAGACCTGAGATaGACTACCTGGAGATTGACTCTGTACCGTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: ATRRRCCSRDLR*TTWRLTLYRGG Trigger: CCCACCACGGTACAGAGTCAATCTCCAGGTAGTTCATCTCAGGTCTCTACTACAACATCGTCTTCTGGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS GCA 72 bp | CCTGTGGGTTCAGCCTGTCCAGCCCAGGTTTGCACGTaGATTGTAAAATGTCCTGGCATTTACTGCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: PVGSACPAQVCT*IVKCPGIYCCH Trigger: ATGACAGCAGTAAATGCCAGGACATTTTACAATGCACGTGCAAACCTGGGCTGGACAGGCTGAACCCACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS GCA 72 bp | AAGGAACCTGTGGGTTCAGCCTGTCCAGCCCAGGTTTaGACGTGCATTGTAAAATGTCCTGGCATTTACTGC | + |
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Preference number: 6 (lower is better) Translates to: KEPVGSACPAQV*TCIVKCPGIYC Trigger: GCAGTAAATGCCAGGACATTTTACAATGCACGTGCAAACCTGGGCTGGACAGGCTGAACCCACAGGTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS GCA 72 bp | ATGCTGTTGTCCGCTCCTAAGTTGGAGAAGCCGGTCTaGCTCAGTCGTAGGTTATGGAAGTCATCCTCAATC | + |
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Preference number: 6 (lower is better) Translates to: MLLSAPKLEKPV*LSRRLWKSSSI Trigger: GATTGAGGATGACTTCCATAACCTACGACTGAGGCAGACCGGCTTCTCCAACTTAGGAGCGGACAACAGCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS CCA 72 bp | CCTGAGATGAACTACCTGGAGATTGACTTTGTACTGTaGTGGGAGGACTGGTGCCACCAGAAGACGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: PEMNYLEIDFVL*WEDWCHQKTML Trigger: CAACATCGTCTTCTGGTGGCACCAGTCCTCCCACCACAGTACAAAGTCAATCTCCAGGTAGTTCATCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS TCA 72 bp | GCCACCAGAAGACGATGTTGTAGTAGAGGCCTGAGATaGACTACCTGGAGATTGACTTTGTACTGTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: ATRRRCCSRGLR*TTWRLTLYCGG Trigger: CCCACCACAGTACAAAGTCAATCTCCAGGTAGTTCATCTCAGGCCTCTACTACAACATCGTCTTCTGGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS CAA 72 bp | TTAACACAAGAAGCAGTTCCTTTACAGGGGTTAGGGTaGCAGAGATCACTGGGACCTGTGCTTCCACCGCTA | + |
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Preference number: 6 (lower is better) Translates to: LTQEAVPLQGLG*QRSLGPVLPPL Trigger: TAGCGGTGGAAGCACAGGTCCCAGTGATCTCTGCAACCCTAACCCCTGTAAAGGAACTGCTTCTTGTGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS CAA 72 bp | AAAGGAACCTGTGGGTTCAGCCTGTCCAGCCCAGGTTaGCACGTGCATTGTAAAATGTCCTGGCATTTACTG | + |
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Preference number: 6 (lower is better) Translates to: KGTCGFSLSSPG*HVHCKMSWHLL Trigger: CAGTAAATGCCAGGACATTTTACAATGCACGTGCAAACCTGGGCTGGACAGGCTGAACCCACAGGTTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS CAA 90 bp | GCAACACAAAAAGGAACCTGTGGGTTCAGCCTGTCCAGCCCAGGTTaGCACGTGCATTGTAAAATGTCCTGGCATTTACTGCTGTCATTC | + |
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Preference number: 6 (lower is better) Translates to: ATQKGTCGFSLSSPG*HVHCKMSWHLLLSF Trigger: GAATGACAGCAGTAAATGCCAGGACATTTTACAATGCACGTGCAAACCTGGGCTGGACAGGCTGAACCCACAGGTTCCTTTTTGTGTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS CCA 72 bp | AAATTGGTCTTTGCAATTCATCCCGCTGTAGCCAAATaGACACTCTTCACACTTCCTGTTCCCGTTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: KLVFAIHPAVAK*TLFTLPVPVCP Trigger: AGGGCAAACGGGAACAGGAAGTGTGAAGAGTGTCCATTTGGCTACAGCGGGATGAATTGCAAAGACCAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS GCA 72 bp | ACTGACATAGTCTTTCACATTGCCACTAGTCTTAATTaGAGTTTCGATTGCAGAAGATACACTCTTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: TDIVFHIATSLN*SFDCRRYTLFS Trigger: ACTGAAAAGAGTGTATCTTCTGCAATCGAAACTGCAATTAAGACTAGTGGCAATGTGAAAGACTATGTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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| CDS GCA 72 bp | TTTCACATTGCCACTAGTCTTAATTGCAGTTTCGATTaGAGAAGATACACTCTTTTCAGTTTCTTTTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: FHIATSLNCSFD*RRYTLFSFFCV Trigger: GACACAAAAGAAACTGAAAAGAGTGTATCTTCTGCAATCGAAACTGCAATTAAGACTAGTGGCAATGTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023520.7 ENSMUST00000115044.8 |
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