Pregenerated sensors for MUC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042784Ensembl transcript IDs: ENSMUST00000041142.4
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCCACCACTAACTaGCCCAGTGTCCCCCAGGGCAGGGCTGGGCTTCACCAGGCTTAC | + |
|
Preference number: 1 (lower is better) Translates to: CLQFSRPVLLRATTN*PSVPQGRAGLHQAY Trigger: GTAAGCCTGGTGAAGCCCAGCCCTGCCCTGGGGGACACTGGGGCAGTTAGTGGTGGCTCTCAGAAGGACTGGCCTGGAAAACTGGAGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| 3UTR GCA 90 bp | ATGAACAGCCTACCAGAAGTCCTGGCTCACCAGCCCAGATCAGAGTaGAGGGGTCTGGCAGTGACCACTGAGGGAGCAGACCGCCAAAGC | + |
|
Preference number: 1 (lower is better) Translates to: MNSLPEVLAHQPRSE*RGLAVTTEGADRQS Trigger: GCTTTGGCGGTCTGCTCCCTCAGTGGTCACTGCCAGACCCCTGCACTCTGATCTGGGCTGGTGAGCCAGGACTTCTGGTAGGCTGTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| 3UTR-3UTR TCA 90 bp | TCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCCACCACTAACGCAGGGGTCTGGCAGTaGCCACTGAGGGAGCAGACC | + |
|
Preference number: 2 (lower is better) Translates to: SHPCLQFSRPVLLRATTNAGVWQ*PLREQT Trigger: GGTCTGCTCCCTCAGTGGTCACTGCCAGACCCCTGC...GTTAGTGGTGGCTCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCAGAGCCACCACTAACTaGCCCAGTGTCCCCCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: FSYVWVPIPVSSFPGQSFRATTN*PSVPQG Trigger: GCCCTGGGGGACACTGGGGCAGTTAGTGGTGGCTCT...GAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCGCCTACCAGAAGTCCTaGCTCACCAGCCCAGATCAG | + |
|
Preference number: 2 (lower is better) Translates to: FSYVWVPIPVSSFPGQSFAYQKS*LTSPDQ Trigger: CTGATCTGGGCTGGTGAGCCAGGACTTCTGGTAGGC...GAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCTTCTGAGAGCCACCACTAACTGCCCCAGTGTCCCCCAGGGCAGGGCTGAAGAGGTGTCACCATaGGCTACTGGAGAGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PVLLRATTNCPSVPQGRAEEVSP*ATGELA Trigger: CGCCAGCTCTCCAGTAGCCCATGGTGACACCTCTTC...AGCCCTGCCCTGGGGGACACTGGGGCAGTTAGTGGTGGCTCTCAGAAGGACTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGGCATGAACAGCCTACCAGAAGTCCTGGCTCACCAGCCCAGATCAGAGTGGGCAATGCCCCAGCCTaGTACCCCCGGCCGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KGHEQPTRSPGSPAQIRVGNAPA*YPRPGL Trigger: CAGTCCCGGCCGGGGGTACCAGGCTGGGGCATTGCC...CACTCTGATCTGGGCTGGTGAGCCAGGACTTCTGGTAGGCTGTTCATGCCCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCCCCAGGGCAGGGCTGGGCTTCACCAGGCTTACGTAGTTGAGGCGCTTTGGCTGGGTCTGAGTTaGTGCTGTGGACTGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVPQGRAGLHQAYVVEALWLGLS*CCGLEW Trigger: CCACTCCAGTCCACAGCAGCAACTCAGACCCAGCCA...AAGCGCCTCAACTACGTAAGCCTGGTGAAGCCCAGCCCTGCCCTGGGGGACACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR GCA 90 bp | TCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCCACCACTAACGCACCAGCAGGGCAATaGCCCAGCCTGGTACCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SHPCLQFSRPVLLRATTNAPAGQ*PSLVPP Trigger: CGGGGGTACCAGGCTGGGGCATTGCCCTGCTGGTGC...GTTAGTGGTGGCTCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR TCA 90 bp | GGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCCACCACTGTCTGGACTGGTGGCTaGGCCCAGTGCAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSHPCLQFSRPVLLRATTVWTGG*AQCRAG Trigger: ACCAGCTCTGCACTGGGCTCAGCCACCAGTCCAGAC...AGTGGTGGCTCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | GGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCCACCACTGGACTGGAGAGCTGGTaGAGTCCCCTGGAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHPCLQFSRPVLLRATTGLESW*SPLEVW Trigger: CCAGACCTCCAGGGGACTCCACCAGCTCTCCAGTCC...AGTGGTGGCTCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCTTCTGAGAGCCACCACTAACTGCCCCAGTGTCCCCCAGGGCAGGGCTGCCACTGTGGACTACTaGAGAGCTGTTGGAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLLRATTNCPSVPQGRAATVDY*RAVGVF Trigger: AAAGACTCCAACAGCTCTCCAGTAGTCCACAGTGGC...AGCCCTGCCCTGGGGGACACTGGGGCAGTTAGTGGTGGCTCTCAGAAGGACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCGCTGGTGGAGTCCCCTaGAGGGCTGGTGGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSYVWVPIPVSSFPGQSFAGGVP*RAGGWG Trigger: TCCCCAGCCACCAGCCCTCCAGGGGACTCCACCAGC...GAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | GGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCCACCACTCCCTTAGAGGGCTGGTaGCTGGAGAAGAGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSHPCLQFSRPVLLRATTPLEGW*LEKRCH Trigger: GTGGCACCTCTTCTCCAGCCACCAGCCCTCTAAGGG...AGTGGTGGCTCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCTTCTGAGAGCCACCACTAACTGCCCCAGTGTCCCCCAGGGCAGGGCTACCGAGGAGCCATTGTaGTCTGGAATGATAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVLLRATTNCPSVPQGRATEEPL*SGMIAE Trigger: CTCAGCTATCATTCCAGACCACAATGGCTCCTCGGT...AGCCCTGCCCTGGGGGACACTGGGGCAGTTAGTGGTGGCTCTCAGAAGGACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGGCATGAACAGCCTACCAGAAGTCCTGGCTCACCAGCCCAGATCAGAGTGTGTGGTCTGGACTGGTaGCTGAGCCCAGTGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGHEQPTRSPGSPAQIRVCGLDW*LSPVQS Trigger: GCTCTGCACTGGGCTCAGCCACCAGTCCAGACCACA...CACTCTGATCTGGGCTGGTGAGCCAGGACTTCTGGTAGGCTGTTCATGCCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCCACCACTAACCACTGTGGTCTGGACTaGTGGCTGAGCCCAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHPCLQFSRPVLLRATTNHCGLD*WLSPVQ Trigger: CTGCACTGGGCTCAGCCACCAGTCCAGACCACAGTG...GTTAGTGGTGGCTCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | GCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGGGTGCTACTCTGGACTaGAGAGCTGGTGGAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AMFGFPSLSPVFQASPSEGATLD*RAGGVP Trigger: GGGGACTCCACCAGCTCTCCAGTCCAGAGTAGCACC...CTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCCCACTGGAGCTGTGGTaGCCGGAGCTGAAGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSYVWVPIPVSSFPGQSFPLELW*PELKRC Trigger: GCACCTCTTCAGCTCCGGCCACCACAGCTCCAGTGG...GAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGGCATGAACAGCCTACCAGAAGTCCTGGCTCACCAGCCCAGATCAGAGTGAATCCACTGGAGCTGTaGTGGCCGGAGCTGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGHEQPTRSPGSPAQIRVNPLEL*WPELKR Trigger: CCTCTTCAGCTCCGGCCACCACAGCTCCAGTGGATT...CACTCTGATCTGGGCTGGTGAGCCAGGACTTCTGGTAGGCTGTTCATGCCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | CTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCTGGTGGAATCCACTaGAGCTGTGGTGGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLGSHPCLQFSRPVLLRAGGIH*SCGGRS Trigger: GCTCCGGCCACCACAGCTCCAGTGGATTCCACCAGC...TCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCCACCACTAACCTTCGGGAGCTCTGGTaGCTGGAGAAGAGGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SHPCLQFSRPVLLRATTNLRELW*LEKRCY Trigger: GTAGCACCTCTTCTCCAGCCACCAGAGCTCCCGAAG...GTTAGTGGTGGCTCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | GGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCCACCACTGTCATCATGGGCTACTaGAGAGCTGGTGGAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSHPCLQFSRPVLLRATTVIMGY*RAGGVH Trigger: GTGGACTCCACCAGCTCTCCAGTAGCCCATGATGAC...AGTGGTGGCTCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | CATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCACCCCCGGCCGGGACTaGGCAGAGGGAGGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLFSYVWVPIPVSSFPGTPGRD*AEGGNC Trigger: GCAGTTCCCTCCCTCTGCCCAGTCCCGGCCGGGGGT...GCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR GCA 90 bp | GGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCCACCACTTGGCTGGAGAAGAGGTaGTACTATGGTCTGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSHPCLQFSRPVLLRATTWLEKR*YYGLES Trigger: GCTCTCCAGACCATAGTAGCACCTCTTCTCCAGCCA...AGTGGTGGCTCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGGCATGAACAGCCTACCAGAAGTCCTGGCTCACCAGCCCAGATCAGAGTGGAAGAGGTGCTACTCTaGACTGGAGAGCTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGHEQPTRSPGSPAQIRVEEVLL*TGELVE Trigger: CTCCACCAGCTCTCCAGTCCAGAGTAGCACCTCTTC...CACTCTGATCTGGGCTGGTGAGCCAGGACTTCTGGTAGGCTGTTCATGCCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGGCATGAACAGCCTACCAGAAGTCCTGGCTCACCAGCCCAGATCAGAGTGAGGAGCTCTGGTGGCTaGAGAAGAGGTGCTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGHEQPTRSPGSPAQIRVRSSGG*RRGATL Trigger: CAGAGTAGCACCTCTTCTCCAGCCACCAGAGCTCCT...CACTCTGATCTGGGCTGGTGAGCCAGGACTTCTGGTAGGCTGTTCATGCCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTGAAGAGGTGCCACCGTaGGCTACTGGAGAGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YSAMFGFPSLSPVFQASPEEVPP*ATGELA Trigger: CGCCAGCTCTCCAGTAGCCCACGGTGGCACCTCTTC...AGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCCCCAGGGCAGGGCTGGGCTTCACCAGGCTTACGTAGTTGAGGCGCTTGTAGTCTTGATGTTTTaGATGGAGGCACTACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVPQGRAGLHQAYVVEALVVLMF*MEALLW Trigger: CCACAGTAGTGCCTCCATCCAAAACATCAAGACTAC...AAGCGCCTCAACTACGTAAGCCTGGTGAAGCCCAGCCCTGCCCTGGGGGACACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGGCATGAACAGCCTACCAGAAGTCCTGGCTCACCAGCCCAGATCAGAGTGGAAGAGGTGCCACTGTaGACTACTGGAGAGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGHEQPTRSPGSPAQIRVEEVPL*TTGELL Trigger: CAACAGCTCTCCAGTAGTCCACAGTGGCACCTCTTC...CACTCTGATCTGGGCTGGTGAGCCAGGACTTCTGGTAGGCTGTTCATGCCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | CATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCCCCTGGAGGTCTGGTaGCTGGGTCTGAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLFSYVWVPIPVSSFPGPLEVW*LGLSCC Trigger: GCAGCAACTCAGACCCAGCCACCAGACCTCCAGGGG...GCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | CCATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGGCTGGTGGAGTCCACTaGAGCTGTGGTGGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSFIQLCLGSHPCLQFSRAGGVH*SCGGWG Trigger: TCCCCAGCCACCACAGCTCCAGTGGACTCCACCAGC...CCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR TCA 90 bp | CTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCTGGTGTCCTGAGATaGGGTGACACTGTTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCLGSHPCLQFSRPVLLRAGVLR*GDTVFL Trigger: GAGGAAAACAGTGTCACCTCATCTCAGGACACCAGC...TCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR TCA 90 bp | ATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCTCTGGTGGCTGGGTCTaGGTTGCTGCTGTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFYSAMFGFPSLSPVFQASGGWV*VAAVDW Trigger: CCAGTCCACAGCAGCAACTCAGACCCAGCCACCAGA...GGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAAGTCCCCTGGAGGTCTaGTGGCTGGGTCTGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFIQLCLGSHPCLQFSRPSPLEV*WLGLSC Trigger: GCAACTCAGACCCAGCCACCAGACCTCCAGGGGACT...TGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | ATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTTCACTGGAGCTGTaGTGGCTGGGGAGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFYSAMFGFPSLSPVFQASSLEL*WLGRRC Trigger: GCACCTCCTCCCCAGCCACCACAGCTCCAGTGAACT...GGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTCTACTGGAGAGCTGGTaGAATCCACTGGAGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSAMFGFPSLSPVFQASPLLESW*NPLELW Trigger: CCACAGCTCCAGTGGATTCCACCAGCTCTCCAGTAG...AGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTGGCACTACTGTGGACTaGAGAACTGGTGGAGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSAMFGFPSLSPVFQASPGTTVD*RTGGVP Trigger: AGGGACTCCACCAGTTCTCCAGTCCACAGTAGTGCC...AGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGCCACCACTAACTGTAAACTGGAGTGGTaGCCAAGACTGATTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHPCLQFSRPVLLRATTNCKLEW*PRLIQS Trigger: GCTCTGAATCAGTCTTGGCCACCACTCCAGTTTACA...GTTAGTGGTGGCTCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | ATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCCATAGGGGCTACGCTTaGTACTGCCAGGGGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: IFYSAMFGFPSLSPVFQAHRGYA*YCQGAR Trigger: ACGTGCCCCCTGGCAGTACCAAGCGTAGCCCCTATG...GGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR TCA 90 bp | GCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAACAGACAACTGGGGTaGACTGTTACTGGAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AMFGFPSLSPVFQASPSENRQLG*TVTGEG Trigger: ACCTTCTCCAGTAACAGTTCACCCCAGTTGTCTGTT...CTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCACCATGGGCTACTaGAGAGCTGGCGGAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFIQLCLGSHPCLQFSRPVTMGY*RAGGVH Trigger: GTGAACTCCGCCAGCTCTCCAGTAGCCCATGGTGAC...TGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | ATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCCTTAGAGGGCTaGTGGCTGGAGAAGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFYSAMFGFPSLSPVFQASPLEG*WLEKRC Trigger: GCACCTCTTCTCCAGCCACCAGCCCTCTAAGGGACT...GGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | ATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCCTGGCAATAGTGCTGTaGCTGGAGGTGGTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IFYSAMFGFPSLSPVFQALAIVL*LEVVAM Trigger: CATGGCCACCACCTCCAGCCACAGCACTATTGCCAG...GGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | CTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAGTTCTTGGTAGTAGTTaGAGCTGGGGTCTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCLGSHPCLQFSRPVLLRVLGSS*SWGLPE Trigger: CTCTGGAAGACCCCAGCTCCAACTACTACCAAGAAC...TCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR TCA 90 bp | TTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGTCCTGAGATGAGGTaGCACTGTTTTCCTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSYVWVPIPVSSFPGQSFCPEMR*HCFPHL Trigger: CAAGTGAGGAAAACAGTGTCACCTCATCTCAGGACA...GAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR TCA 90 bp | CTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAAGTGGTGGCCAAGACTaGTTCAGAGCTGTTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCLGSHPCLQFSRPVLLRSGGQD*FRAVSC Trigger: ACAACTAACAGCTCTGAATCAGTCTTGGCCACCACT...TCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR GCA 90 bp | TCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCATGGCTGGAGAAGAGGTaGTACTCTGGACTGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFIQLCLGSHPCLQFSRPWLEKR*YSGLES Trigger: GCTCTCCAGTCCAGAGTAGCACCTCTTCTCCAGCCA...TGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | ATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCCTTCAGGAGCTCTGGTaGCTGGAGAAGAGGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: IFYSAMFGFPSLSPVFQALQELW*LEKRCY Trigger: GTAGCACCTCTTCTCCAGCCACCAGAGCTCCTGAAG...GGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | CTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGAAGTGGTCACCACAGCTaGGTTGGTATAAGAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LCLGSHPCLQFSRPVLLRSGHHS*VGIRET Trigger: AGTCTCTCTTATACCAACCCAGCTGTGGTGACCACT...TCTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTGGTAGTAGTTGGAGCTaGGGTCTTCCAGAGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSAMFGFPSLSPVFQASPGSSWS*GLPEKN Trigger: ATTCTTCTCTGGAAGACCCCAGCTCCAACTACTACC...AGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAACAAGTTGGCAGAAGTaGTCACCACAGCTGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFIQLCLGSHPCLQFSRPTSWQK*SPQLGW Trigger: CCAACCCAGCTGTGGTGACCACTTCTGCCAACTTGT...TGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR GCA 90 bp | AAAGGGCATGAACAGCCTACCAGAAGTCCTGGCTCACCAGCCCAGATCAGAGTGCAGATTATAGTCATCTaGCTCCTTCTTATGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KGHEQPTRSPGSPAQIRVQIIVI*LLLMLY Trigger: ATACAGCATAAGAAGGAGGCAGATGACTATAATCTG...CACTCTGATCTGGGCTGGTGAGCCAGGACTTCTGGTAGGCTGTTCATGCCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR GCA 90 bp | TATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGCCTCCTTCTTATaGTGTATAAGCTGTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSAMFGFPSLSPVFQASPSASFL*CISCDF Trigger: GAAGTCACAGCTTATACAGCATAAGAAGGAGGCAGA...AGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | CATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCAGTGCCATTGCTGACTaGAGTTGTAGCTATTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLLFSYVWVPIPVSSFPGSAIAD*SCSYCR Trigger: TCTGCAATAGCTACAACTCCAGTCAGCAATGGCACT...GCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTCTCCGTTAAAAATCTaGAGAAACAATCCAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: FSYVWVPIPVSSFPGQSFSPLKI*RNNPEM Trigger: CATTTCTGGATTGTTTCTGCAGATTTTTAACGGAGA...GAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CCA 90 bp | TCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCATTTGGTAGTAGAGAATaGCATGCTACTGTAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFIQLCLGSHPCLQFSRPFGSRE*HATVNW Trigger: CCAGTTTACAGTAGCATGCCATTCTCTACTACCAAA...TGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | GTGGAGTCCCCTGGAGGGCTGGTGGCTGGGGACGAGGTACCACCGTaGACTACTGGAGAGCTGGTGGAATCCACTGGAGCTGTGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VESPGGLVAGDEVPP*TTGELVESTGAVVA Trigger: GGCCACCACAGCTCCAGTGGATTCCACCAGCTCTCCAGTAGTCCACGGTGGTACCTCGTCCCCAGCCACCAGCCCTCCAGGGGACTCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | TGGTGGCTGGGGACGAGGTACCACCGTGGACTACTGGAGAGCTGGTaGAATCCACTGGAGCTGTGGTGGCCGGAGCTGAAGAGGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WWLGTRYHRGLLESW*NPLELWWPELKRCH Trigger: GTGGCACCTCTTCAGCTCCGGCCACCACAGCTCCAGTGGATTCCACCAGCTCTCCAGTAGTCCACGGTGGTACCTCGTCCCCAGCCACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | AGGTGCTACTATGGTCTGGAGAGCTGGTGGAGTCCCCTGGAGGGCTaGTGGCTGGGGACGAGGTACCACCGTGGACTACTGGAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RCYYGLESWWSPLEG*WLGTRYHRGLLESW Trigger: CCAGCTCTCCAGTAGTCCACGGTGGTACCTCGTCCCCAGCCACCAGCCCTCCAGGGGACTCCACCAGCTCTCCAGACCATAGTAGCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | GAGCTCTGGTGGCTGGAGAAGAGGTGCTACTCTGGACTGGAGAGCTaGTGGAGTCCCCTGGAGGTCTGGTGGCTGGGTCTGAGTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ELWWLEKRCYSGLES*WSPLEVWWLGLSCC Trigger: GCAGCAACTCAGACCCAGCCACCAGACCTCCAGGGGACTCCACCAGCTCTCCAGTCCAGAGTAGCACCTCTTCTCCAGCCACCAGAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | ACTATGGTCTGGAGAGCTGGTGGAGTCCCCTGGAGGGCTGGTGGCTaGGGACGAGGTACCACCGTGGACTACTGGAGAGCTGGTGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: TMVWRAGGVPWRAGG*GRGTTVDYWRAGGI Trigger: GATTCCACCAGCTCTCCAGTAGTCCACGGTGGTACCTCGTCCCCAGCCACCAGCCCTCCAGGGGACTCCACCAGCTCTCCAGACCATAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | TGGAGAAGAGGTGCTACTATGGTCTGGAGAGCTGGTGGAGTCCCCTaGAGGGCTGGTGGCTGGGGACGAGGTACCACCGTGGACTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: WRRGATMVWRAGGVP*RAGGWGRGTTVDYW Trigger: CCAGTAGTCCACGGTGGTACCTCGTCCCCAGCCACCAGCCCTCCAGGGGACTCCACCAGCTCTCCAGACCATAGTAGCACCTCTTCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | CTCTGGTGGCTGGAGAAGAGGTGCTACTCTGGACTGGAGAGCTGGTaGAGTCCCCTGGAGGTCTGGTGGCTGGGTCTGAGTTGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LWWLEKRCYSGLESW*SPLEVWWLGLSCCC Trigger: ACAGCAGCAACTCAGACCCAGCCACCAGACCTCCAGGGGACTCCACCAGCTCTCCAGTCCAGAGTAGCACCTCTTCTCCAGCCACCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | GTAGAGTCTTCAGGAGCTCTGGTGGCTGGAGAAGAGGTGCTACTCTaGACTGGAGAGCTGGTGGAGTCCCCTGGAGGTCTGGTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VESSGALVAGEEVLL*TGELVESPGGLVAG Trigger: CCCAGCCACCAGACCTCCAGGGGACTCCACCAGCTCTCCAGTCCAGAGTAGCACCTCTTCTCCAGCCACCAGAGCTCCTGAAGACTCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | AGCACCAGCAGGGCAATGCCCCAGCCTGGTACCCCCGGCCGGGACTaGGCAGAGGGAGGGAACTGCATCTCATTCACTTTGACTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: STSRAMPQPGTPGRD*AEGGNCISFTLTSE Trigger: TTCAGAAGTCAAAGTGAATGAGATGCAGTTCCCTCCCTCTGCCCAGTCCCGGCCGGGGGTACCAGGCTGGGGCATTGCCCTGCTGGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | TACCACCGTGGACTACTGGAGAGCTGGTGGAATCCACTGGAGCTGTaGTGGCCGGAGCTGAAGAGGTGCCACTGTGGACTACTGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YHRGLLESWWNPLEL*WPELKRCHCGLLES Trigger: GCTCTCCAGTAGTCCACAGTGGCACCTCTTCAGCTCCGGCCACCACAGCTCCAGTGGATTCCACCAGCTCTCCAGTAGTCCACGGTGGTA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CAA 90 bp | CCAGTCCTTCTGAGAGCCACCACTAACTGCCCCAGTGTCCCCCAGGGCAGGGCTGTTCCTCTTCAGTTCTaGGTAGTAGTTGGAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVLLRATTNCPSVPQGRAVPLQF*VVVGAG Trigger: CCCAGCTCCAACTACTACCAAGAACTGAAGAGGAAC...AGCCCTGCCCTGGGGGACACTGGGGCAGTTAGTGGTGGCTCTCAGAAGGACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 90 bp | AGCTGGTGGAATCCACTGGAGCTGTGGTGGCCGGAGCTGAAGAGGTaGCACTGTGGACTACTGGAGAGCTGTTGGAGTCTTTTGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SWWNPLELWWPELKR*HCGLLESCWSLLKG Trigger: GCCTTTCAAAAGACTCCAACAGCTCTCCAGTAGTCCACAGTGGCACCTCTTCAGCTCCGGCCACCACAGCTCCAGTGGATTCCACCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 90 bp | CACCACAGCTGGGTTGGTATAAGAGAGACTGCTACTGCCATTACCTaGCGAAACCTCCTCATAGGGGCTACGCTTGGTACTGCCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HHSWVGIRETATAIT*RNLLIGATLGTARG Trigger: CCCCCTGGCAGTACCAAGCGTAGCCCCTATGAGGAGGTTTCGGCAGGTAATGGCAGTAGCAGTCTCTCTTATACCAACCCAGCTGTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | TTGGAGTCTTTTGAAAGGCTAGTGGCTGGGGAAGAGGTGTCACCATaGGCTACTGGAGAGCTGGCGGAGTTCACTGGAGCTGTGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LESFERLVAGEEVSP*ATGELAEFTGAVVA Trigger: AGCCACCACAGCTCCAGTGAACTCCGCCAGCTCTCCAGTAGCCCATGGTGACACCTCTTCCCCAGCCACTAGCCTTTCAAAAGACTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CAA 90 bp | GCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCTGAGGTGACTGAGGTGCCATaGTGGTCTGGAGTGCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AMFGFPSLSPVFQASPSEVTEVP*WSGVLA Trigger: AGCTAGCACTCCAGACCACAATGGCACCTCAGTCAC...CTCAGAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 90 bp | AGTTGGCAGAAGTGGTCACCACAGCTGGGTTGGTATAAGAGAGACTaGTACTGCCATTACCTGCCGAAACCTCCTCATAGGGGCTACGCT | + |
|
Preference number: 5 (lower is better) Translates to: SWQKWSPQLGWYKRD*YCHYLPKPPHRGYA Trigger: AGCGTAGCCCCTATGAGGAGGTTTCGGCAGGTAATGGCAGTAGCAGTCTCTCTTATACCAACCCAGCTGTGGTGACCACTTCTGCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | GCCAAGACTGATTCAGAGCTGTTAGTTGTAGTTGAGGTACCACTGTaGTCTGGACTGGTGGCTGAGCCCAGTGCAGAGCTGGTAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AKTDSELLVVVEVPL*SGLVAEPSAELVVV Trigger: CACAACTACCAGCTCTGCACTGGGCTCAGCCACCAGTCCAGACCACAGTGGTACCTCAACTACAACTAACAGCTCTGAATCAGTCTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 90 bp | GCTAAGTCTGATGTAGTCTTGATGTTTTGGATGGAGGCACTACTGTaGACTGGAGAACTGGTGGAGTCCCTTAGAGGGCTGGTGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AKSDVVLMFWMEALL*TGELVESLRGLVAG Trigger: TCCAGCCACCAGCCCTCTAAGGGACTCCACCAGTTCTCCAGTCCACAGTAGTGCCTCCATCCAAAACATCAAGACTACATCAGACTTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CAA 90 bp | CCATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGGTGGCTGGGTCTGAGTaGCTGCTGTGGACTGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSFIQLCLGSHPCLQFSRVAGSE*LLWTGV Trigger: CACTCCAGTCCACAGCAGCAACTCAGACCCAGCCAC...CCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 90 bp | AAAGATGTCCAGCTGCCCATAGCTCTTTCGGCGGCACTGGCACACTaGCAGGGCAAGGAAATAGACGATAGCCAAAGCAACCAAAATACA | + |
|
Preference number: 5 (lower is better) Translates to: KDVQLPIALSAALAH*QGKEIDDSQSNQNT Trigger: TGTATTTTGGTTGCTTTGGCTATCGTCTATTTCCTTGCCCTGGCAGTGTGCCAGTGCCGCCGAAAGAGCTATGGGCAGCTGGACATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CAA 90 bp | TTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTTCAAACAGGGTATTGACTaGGCACTGAAGGCTGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSYVWVPIPVSSFPGQSFKQGID*ALKAEC Trigger: GCACTCAGCCTTCAGTGCCAAGTCAATACCCTGTTT...GAAGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CAA 90 bp | TCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGAGCCTGACCTGAACTaGATGCTAGAGATCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFIQLCLGSHPCLQFSRPEPDLN*MLEIPR Trigger: TCTGGGGATCTCTAGCATCAAGTTCAGGTCAGGCTC...TGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGGCATGAACAGCCTACCAGAAGTCCTGGCTCACCAGCCCAGATCAGAGTGTGCATCTCATTCACTTaGACTTCTGAAATAGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGHEQPTRSPGSPAQIRVCISFT*TSEIVR Trigger: TCTGACTATTTCAGAAGTCAAAGTGAATGAGATGCA...CACTCTGATCTGGGCTGGTGAGCCAGGACTTCTGGTAGGCTGTTCATGCCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CAA 90 bp | TATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCAGTCCTAAGTCTGATGTAGTCTaGATGTTTTGGATGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YSAMFGFPSLSPVFQASPKSDVV*MFWMEA Trigger: TGCCTCCATCCAAAACATCAAGACTACATCAGACTT...AGGACTGGCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS TCA 90 bp | AGTCAGATTATAGTCATCTGCCTCCTTCTTATGCTGTATAAGCTGTaGCTTCACGTCAGAGGCACTAAAAGTACCCTCCCGGAAAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQIIVICLLLMLYKL*LHVRGTKSTLPENH Trigger: GTGGTTTTCCGGGAGGGTACTTTTAGTGCCTCTGACGTGAAGTCACAGCTTATACAGCATAAGAAGGAGGCAGATGACTATAATCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS-3UTR CAA 90 bp | CATCTTTTATTCAGCTATGTTTGGGTTCCCATCCCTGTCTCCAGTTTTCCAGGCCACTGTTTTCCTCACTaGGAAGGGCAAGAAAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: HLLFSYVWVPIPVSSFPGHCFPH*EGQENL Trigger: AAGGTTTTCTTGCCCTTCCAAGTGAGGAAAACAGTG...GCCTGGAAAACTGGAGACAGGGATGGGAACCCAAACATAGCTGAATAAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS TCA 90 bp | GGACTGGGCAGAGGGAGGGAACTGCATCTCATTCACTTTGACTTCTaGAATAGTCAGATTATAGTCATCTGCCTCCTTCTTATGCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GLGRGRELHLIHFDF*NSQIIVICLLLMLY Trigger: ATACAGCATAAGAAGGAGGCAGATGACTATAATCTGACTATTTCAGAAGTCAAAGTGAATGAGATGCAGTTCCCTCCCTCTGCCCAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | AATACAGACCAGCACCAGCAGGGCAATGCCCCAGCCTaGTACCCCCGGCCGGGACTGGGCAGAGGGAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: NTDQHQQGNAPA*YPRPGLGRGRE Trigger: TTCCCTCCCTCTGCCCAGTCCCGGCCGGGGGTACCAGGCTGGGGCATTGCCCTGCTGGTGCTGGTCTGTATT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 72 bp | AAGCAACCAAAATACAGACCAGCACCAGCAGGGCAATaGCCCAGCCTGGTACCCCCGGCCGGGACTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KQPKYRPAPAGQ*PSLVPPAGTGQ Trigger: CTGCCCAGTCCCGGCCGGGGGTACCAGGCTGGGGCATTGCCCTGCTGGTGCTGGTCTGTATTTTGGTTGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | GTCACCATGGGCTACTGGAGAGCTGGCGGAGTTCACTaGAGCTGTGGTGGCTGGGGAGGAGGTGCCACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VTMGYWRAGGVH*SCGGWGGGATE Trigger: CTCAGTGGCACCTCCTCCCCAGCCACCACAGCTCCAGTGAACTCCGCCAGCTCTCCAGTAGCCCATGGTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | CTGGGGAAGAGGTGTCACCATGGGCTACTGGAGAGCTaGCGGAGTTCACTGGAGCTGTGGTGGCTGGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGKRCHHGLLES*RSSLELWWLGR Trigger: CCTCCCCAGCCACCACAGCTCCAGTGAACTCCGCCAGCTCTCCAGTAGCCCATGGTGACACCTCTTCCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | CTGGGGACGAGGTACCACCGTGGACTACTGGAGAGCTaGTGGAATCCACTGGAGCTGTGGTGGCCGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGTRYHRGLLES*WNPLELWWPEL Trigger: CAGCTCCGGCCACCACAGCTCCAGTGGATTCCACCAGCTCTCCAGTAGTCCACGGTGGTACCTCGTCCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | GCTGGTGGCTGGGGACGAGGTACCACCGTGGACTACTaGAGAGCTGGTGGAATCCACTGGAGCTGTGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGGWGRGTTVDY*RAGGIHWSCGG Trigger: GCCACCACAGCTCCAGTGGATTCCACCAGCTCTCCAGTAGTCCACGGTGGTACCTCGTCCCCAGCCACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | CCTGGAGGGCTGGTGGCTGGGGACGAGGTACCACCGTaGACTACTGGAGAGCTGGTGGAATCCACTGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGGLVAGDEVPP*TTGELVESTGA Trigger: AGCTCCAGTGGATTCCACCAGCTCTCCAGTAGTCCACGGTGGTACCTCGTCCCCAGCCACCAGCCCTCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | TATGGTCTGGAGAGCTGGTGGAGTCCCCTGGAGGGCTaGTGGCTGGGGACGAGGTACCACCGTGGACTACTG | + |
|
Preference number: 6 (lower is better) Translates to: YGLESWWSPLEG*WLGTRYHRGLL Trigger: CAGTAGTCCACGGTGGTACCTCGTCCCCAGCCACCAGCCCTCCAGGGGACTCCACCAGCTCTCCAGACCATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | AGGGCAATGCCCCAGCCTGGTACCCCCGGCCGGGACTaGGCAGAGGGAGGGAACTGCATCTCATTCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RAMPQPGTPGRD*AEGGNCISFTL Trigger: CAAAGTGAATGAGATGCAGTTCCCTCCCTCTGCCCAGTCCCGGCCGGGGGTACCAGGCTGGGGCATTGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 72 bp | TGGAGTCCCTTAGAGGGCTGGTGGCTGGAGAAGAGGTaGCACCGTGGGCTACTGGAGAGCTGGCGGAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: WSPLEGWWLEKR*HRGLLESWRSL Trigger: AAGACTCCGCCAGCTCTCCAGTAGCCCACGGTGGCACCTCTTCTCCAGCCACCAGCCCTCTAAGGGACTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 72 bp | CTGCCGAAACCTCCTCATAGGGGCTACGCTTGGTACTaGCAGGGGGCACGTAGCGTCCGTGAGTGTGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPKPPHRGYAWY*QGARSVRECGR Trigger: CCTACCACACTCACGGACGCTACGTGCCCCCTGGCAGTACCAAGCGTAGCCCCTATGAGGAGGTTTCGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | TGGCTGGAGAAGAGGTGCTACTCTGGACTGGAGAGCTaGTGGAGTCCCCTGGAGGTCTGGTGGCTGGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WLEKRCYSGLES*WSPLEVWWLGL Trigger: CAGACCCAGCCACCAGACCTCCAGGGGACTCCACCAGCTCTCCAGTCCAGAGTAGCACCTCTTCTCCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | GGGACGAGGTACCACCGTGGACTACTGGAGAGCTGGTaGAATCCACTGGAGCTGTGGTGGCCGGAGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GTRYHRGLLESW*NPLELWWPELK Trigger: CTTCAGCTCCGGCCACCACAGCTCCAGTGGATTCCACCAGCTCTCCAGTAGTCCACGGTGGTACCTCGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | GGGAAGAGGTGTCATCATGGGCTACTGGAGAGCTGGTaGAGTCCACTGGAGCTGTGGTGGCTGGGGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GKRCHHGLLESW*SPLELWWLGRR Trigger: CCTCCTCCCCAGCCACCACAGCTCCAGTGGACTCCACCAGCTCTCCAGTAGCCCATGATGACACCTCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | CTGGGGAAGAGGTGTCATCATGGGCTACTGGAGAGCTaGTGGAGTCCACTGGAGCTGTGGTGGCTGGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGKRCHHGLLES*WSPLELWWLGR Trigger: CCTCCCCAGCCACCACAGCTCCAGTGGACTCCACCAGCTCTCCAGTAGCCCATGATGACACCTCTTCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | CTGGAGAAGAGGTGCTACTCTGGACTGGAGAGCTGGTaGAGTCCCCTGGAGGTCTGGTGGCTGGGTCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LEKRCYSGLESW*SPLEVWWLGLS Trigger: ACTCAGACCCAGCCACCAGACCTCCAGGGGACTCCACCAGCTCTCCAGTCCAGAGTAGCACCTCTTCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | TCAGGAGCTCTGGTGGCTGGAGAAGAGGTGCTACTCTaGACTGGAGAGCTGGTGGAGTCCCCTGGAGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGALVAGEEVLL*TGELVESPGGL Trigger: CAGACCTCCAGGGGACTCCACCAGCTCTCCAGTCCAGAGTAGCACCTCTTCTCCAGCCACCAGAGCTCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | GCTAGTGGCTGGGGAAGAGGTGTCATCATGGGCTACTaGAGAGCTGGTGGAGTCCACTGGAGCTGTGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASGWGRGVIMGY*RAGGVHWSCGG Trigger: GCCACCACAGCTCCAGTGGACTCCACCAGCTCTCCAGTAGCCCATGATGACACCTCTTCCCCAGCCACTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | GGACTACTGGAGAGCTGGTGGAATCCACTGGAGCTGTaGTGGCCGGAGCTGAAGAGGTGCCACTGTGGACTA | + |
|
Preference number: 6 (lower is better) Translates to: GLLESWWNPLEL*WPELKRCHCGL Trigger: TAGTCCACAGTGGCACCTCTTCAGCTCCGGCCACCACAGCTCCAGTGGATTCCACCAGCTCTCCAGTAGTCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | CATTACCTGCCGAAACCTCCTCATAGGGGCTACGCTTaGTACTGCCAGGGGGCACGTAGCGTCCGTGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HYLPKPPHRGYA*YCQGARSVREC Trigger: ACACTCACGGACGCTACGTGCCCCCTGGCAGTACCAAGCGTAGCCCCTATGAGGAGGTTTCGGCAGGTAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CAA 72 bp | GTGGAGTCCCCTGGAGGTCTGGTGGCTGGGTCTGAGTaGCTGCTGTGGACTGGAGTGGTAGTCGATGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: VESPGGLVAGSE*LLWTGVVVDAK Trigger: CTTAGCATCGACTACCACTCCAGTCCACAGCAGCAACTCAGACCCAGCCACCAGACCTCCAGGGGACTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | CCTGGAGGTCTGGTGGCTGGGTCTGAGTTGCTGCTGTaGACTGGAGTGGTAGTCGATGCTAAGGAACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGGLVAGSELLL*TGVVVDAKELL Trigger: CAGCAGTTCCTTAGCATCGACTACCACTCCAGTCCACAGCAGCAACTCAGACCCAGCCACCAGACCTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CAA 90 bp | GTGGCCGGAGCTGAAGAGGTGCCACTGTGGACTACTGGAGAGCTGTaGGAGTCTTTTGAAAGGCTAGTGGCTGGGGAAGAGGTGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: VAGAEEVPLWTTGEL*ESFERLVAGEEVSP Trigger: TGGTGACACCTCTTCCCCAGCCACTAGCCTTTCAAAAGACTCCAACAGCTCTCCAGTAGTCCACAGTGGCACCTCTTCAGCTCCGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 72 bp | AATCCACTGGAGCTGTGGTGGCCGGAGCTGAAGAGGTaGCACTGTGGACTACTGGAGAGCTGTTGGAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: NPLELWWPELKR*HCGLLESCWSL Trigger: AAGACTCCAACAGCTCTCCAGTAGTCCACAGTGGCACCTCTTCAGCTCCGGCCACCACAGCTCCAGTGGATT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 72 bp | CAGCTGCCCATAGCTCTTTCGGCGGCACTGGCACACTaGCAGGGCAAGGAAATAGACGATAGCCAAAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: QLPIALSAALAH*QGKEIDDSQSN Trigger: GTTGCTTTGGCTATCGTCTATTTCCTTGCCCTGGCAGTGTGCCAGTGCCGCCGAAAGAGCTATGGGCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | TCTGAAAGGCTAGTGGCTGGGGAAGAGGTGTCATCATaGGCTACTGGAGAGCTGGTGGAGTCCACTGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SERLVAGEEVSS*ATGELVESTGA Trigger: AGCTCCAGTGGACTCCACCAGCTCTCCAGTAGCCCATGATGACACCTCTTCCCCAGCCACTAGCCTTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | TTTGGATGGAGGCACTACTGTGGACTGGAGAACTGGTaGAGTCCCTTAGAGGGCTGGTGGCTGGAGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FGWRHYCGLENW*SPLEGWWLEKR Trigger: CCTCTTCTCCAGCCACCAGCCCTCTAAGGGACTCCACCAGTTCTCCAGTCCACAGTAGTGCCTCCATCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 72 bp | GGTACCCCCGGCCGGGACTGGGCAGAGGGAGGGAACTaGATCTCATTCACTTTGACTTCTGAAATAGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GTPGRDWAEGGN*ISFTLTSEIVR Trigger: TCTGACTATTTCAGAAGTCAAAGTGAATGAGATGCAGTTCCCTCCCTCTGCCCAGTCCCGGCCGGGGGTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | GATTCAGAGCTGTTAGTTGTAGTTGAGGTACCACTGTaGTCTGGACTGGTGGCTGAGCCCAGTGCAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DSELLVVVEVPL*SGLVAEPSAEL Trigger: CAGCTCTGCACTGGGCTCAGCCACCAGTCCAGACCACAGTGGTACCTCAACTACAACTAACAGCTCTGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CAA 72 bp | CCCAACACAGAACTGGTAGGTAGCACCGAGGAGCCATaGTGGTCTGGAATGATAGCTGAGCCTGACGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: PNTELVGSTEEP*WSGMIAEPDVT Trigger: AGTGACGTCAGGCTCAGCTATCATTCCAGACCACAATGGCTCCTCGGTGCTACCTACCAGTTCTGTGTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 72 bp | TCACCACAGCTGGGTTGGTATAAGAGAGACTGCTACTaGCATTACCTGCCGAAACCTCCTCATAGGGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: SPQLGWYKRDCY*HYLPKPPHRGY Trigger: GTAGCCCCTATGAGGAGGTTTCGGCAGGTAATGGCAGTAGCAGTCTCTCTTATACCAACCCAGCTGTGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CAA 72 bp | CCCAGTGCAGAGCTGGTAGTTGTGACTGAGGTGCCATaGTGGTCTGGAGTGCTAGCTAAGTCTGATGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PSAELVVVTEVP*WSGVLAKSDVV Trigger: GACTACATCAGACTTAGCTAGCACTCCAGACCACAATGGCACCTCAGTCACAACTACCAGCTCTGCACTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CAA 90 bp | GTAGCTGAGCCCAACACAGAACTGGTAGGTAGCACCGAGGAGCCATaGTGGTCTGGAATGATAGCTGAGCCTGACGTCACTTTGGTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: VAEPNTELVGSTEEP*WSGMIAEPDVTLVV Trigger: TACTACCAAAGTGACGTCAGGCTCAGCTATCATTCCAGACCACAATGGCTCCTCGGTGCTACCTACCAGTTCTGTGTTGGGCTCAGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CAA 90 bp | GTGGCTGAGCCCAGTGCAGAGCTGGTAGTTGTGACTGAGGTGCCATaGTGGTCTGGAGTGCTAGCTAAGTCTGATGTAGTCTTGATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VAEPSAELVVVTEVP*WSGVLAKSDVVLMF Trigger: AAACATCAAGACTACATCAGACTTAGCTAGCACTCCAGACCACAATGGCACCTCAGTCACAACTACCAGCTCTGCACTGGGCTCAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS TCA 72 bp | GGAGTGGTAGTCGATGCTAAGGAACTGCTGGTGTCCTaGGATGAGGTGACACTGTTTTCCTCACTTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVVVDAKELLVS*DEVTLFSSLGR Trigger: CCTTCCAAGTGAGGAAAACAGTGTCACCTCATCTCAGGACACCAGCAGTTCCTTAGCATCGACTACCACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 72 bp | TGGGTTGGTATAAGAGAGACTGCTACTGCCATTACCTaGCGAAACCTCCTCATAGGGGCTACGCTTGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: WVGIRETATAIT*RNLLIGATLGT Trigger: AGTACCAAGCGTAGCCCCTATGAGGAGGTTTCGGCAGGTAATGGCAGTAGCAGTCTCTCTTATACCAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS GCA 72 bp | AAGTGGTCACCACAGCTGGGTTGGTATAAGAGAGACTaGTACTGCCATTACCTGCCGAAACCTCCTCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: KWSPQLGWYKRD*YCHYLPKPPHR Trigger: CCTATGAGGAGGTTTCGGCAGGTAATGGCAGTAGCAGTCTCTCTTATACCAACCCAGCTGTGGTGACCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | GATGTAGTCTTGATGTTTTGGATGGAGGCACTACTGTaGACTGGAGAACTGGTGGAGTCCCTTAGAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DVVLMFWMEALL*TGELVESLRGL Trigger: CAGCCCTCTAAGGGACTCCACCAGTTCTCCAGTCCACAGTAGTGCCTCCATCCAAAACATCAAGACTACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS TCA 72 bp | TCGATGCTAAGGAACTGCTGGTGTCCTGAGATGAGGTaGCACTGTTTTCCTCACTTGGAAGGGCAAGAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SMLRNCWCPEMR*HCFPHLEGQEN Trigger: GTTTTCTTGCCCTTCCAAGTGAGGAAAACAGTGTCACCTCATCTCAGGACACCAGCAGTTCCTTAGCATCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | GGAGTGCTAGCTAAGTCTGATGTAGTCTTGATGTTTTaGATGGAGGCACTACTGTGGACTGGAGAACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GVLAKSDVVLMF*MEALLWTGELV Trigger: CACCAGTTCTCCAGTCCACAGTAGTGCCTCCATCCAAAACATCAAGACTACATCAGACTTAGCTAGCACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS TCA 72 bp | ATAGTCATCTGCCTCCTTCTTATGCTGTATAAGCTGTaGCTTCACGTCAGAGGCACTAAAAGTACCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: IVICLLLMLYKL*LHVRGTKSTLP Trigger: CGGGAGGGTACTTTTAGTGCCTCTGACGTGAAGTCACAGCTTATACAGCATAAGAAGGAGGCAGATGACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CAA 72 bp | TTGTGGTCTGGAGTGCTAGCTAAGTCTGATGTAGTCTaGATGTTTTGGATGGAGGCACTACTGTGGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LWSGVLAKSDVV*MFWMEALLWTG Trigger: TCCAGTCCACAGTAGTGCCTCCATCCAAAACATCAAGACTACATCAGACTTAGCTAGCACTCCAGACCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CAA 72 bp | TTTCCTCACTTGGAAGGGCAAGAAAACCTTTTAGACTaGCTAGAAGTAGCAGCAGGAAGAAAGGAGCCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: FPHLEGQENLLD*LEVAAGRKEPE Trigger: TTCGGGCTCCTTTCTTCCTGCTGCTACTTCTAGCAAGTCTAAAAGGTTTTCTTGCCCTTCCAAGTGAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CAA 72 bp | CTGCAGAAACAATCCAGAAATGTTCCTCTTCAGTTCTaGGTAGTAGTTGGAGCTGGGGTCTTCCAGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LQKQSRNVPLQF*VVVGAGVFQRR Trigger: TCTTCTCTGGAAGACCCCAGCTCCAACTACTACCAAGAACTGAAGAGGAACATTTCTGGATTGTTTCTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CCA 72 bp | AAAGACAAGAAGAAGAAGGAGACCCCAACAGACAACTaGGGTGAACTGTTACTGGAGAAGGTAGAAAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: KDKKKKETPTDN*GELLLEKVENG Trigger: ACCATTTTCTACCTTCTCCAGTAACAGTTCACCCCAGTTGTCTGTTGGGGTCTCCTTCTTCTTCTTGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||
| CDS CAA 90 bp | GTTAAAAATCTGCAGAAACAATCCAGAAATGTTCCTCTTCAGTTCTaGGTAGTAGTTGGAGCTGGGGTCTTCCAGAGAAGAATTAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: VKNLQKQSRNVPLQF*VVVGAGVFQRRIKW Trigger: CCATTTAATTCTTCTCTGGAAGACCCCAGCTCCAACTACTACCAAGAACTGAAGAGGAACATTTCTGGATTGTTTCTGCAGATTTTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041142.4 |
||