Pregenerated sensors for MTX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021704Ensembl transcript IDs: ENSMUST00000076169.4, ENSMUST00000224368.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGGGCATAATCCCTGTTCCCATGCTGGCTGCTACCACCACCTCTaGAACCCATGGCTCACAGTGTTTGGTCAGGGCTGTGGACCATTT | + |
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Preference number: 1 (lower is better) Translates to: NGHNPCSHAGCYHHL*NPWLTVFGQGCGPF Trigger: AAATGGTCCACAGCCCTGACCAAACACTGTGAGCCATGGGTTTCAGAGGTGGTGGTAGCAGCCAGCATGGGAACAGGGATTATGCCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR TCA 90 bp | ACAGACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCCAATaGCTCTCAGAGGCTGATGCAAACTCTGGCAGGGCACTTCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: TDQRTSSQNGLLLLQ*LSEADANSGRALPV Trigger: CACTGGAAGTGCCCTGCCAGAGTTTGCATCAGCCTCTGAGAGTCATTGGAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR TCA 90 bp | TCAGAGGGAAAGGGATACGAGAGGCAAACCACGGCTTTGTCACGGTaGAGTAGTTCTCATTCTCCACCCAGAAGGTGTGAAGCACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SEGKGYERQTTALSR*SSSHSPPRRCEAQQ Trigger: CTGCTGTGCTTCACACCTTCTGGGTGGAGAATGAGAACTACTTCACCGTGACAAAGCCGTGGTTTGCCTCTCGTATCCCTTTCCCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224368.2 |
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| 3UTR GCA 90 bp | CACAGTAACTCCCTGGTTGAAGTCTGGAGTCGTCTGAACATGGCCTaGTGCATTCTTCTATCATGTAAGCCCCTGCTCCTTCCTCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: HSNSLVEVWSRLNMA*CILLSCKPLLLPQQ Trigger: CTGCTGAGGAAGGAGCAGGGGCTTACATGATAGAAGAATGCAGCAGGCCATGTTCAGACGACTCCAGACTTCAACCAGGGAGTTACTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR CCA 90 bp | AAAACCGAAGCGTCAGGACTAAGGTCCAAGAGCTTTTCCTGTGGTTaGTTGCTCACCATTACTCCAGCACCCAAACCGCACGGCAAGTTG | + |
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Preference number: 1 (lower is better) Translates to: KTEASGLRSKSFSCG*LLTITPAPKPHGKL Trigger: CAACTTGCCGTGCGGTTTGGGTGCTGGAGTAATGGTGAGCAACCAACCACAGGAAAAGCTCTTGGACCTTAGTCCTGACGCTTCGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR GCA 90 bp | AGTAACTCCCTGGTTGAAGTCTGGAGTCGTCTGAACATGGCCTGCTaGATTCTTCTATCATGTAAGCCCCTGCTCCTTCCTCAGCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: SNSLVEVWSRLNMAC*ILLSCKPLLLPQQN Trigger: GTTCTGCTGAGGAAGGAGCAGGGGCTTACATGATAGAAGAATGCAGCAGGCCATGTTCAGACGACTCCAGACTTCAACCAGGGAGTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR GCA 90 bp | ACAACAGCACTGAGTGCCAAACAAGCATCCTGGGGTCCCAGCGATTaGAACACCAACAGCAACTTCCACACTAACAAAGAACCAAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: TTALSAKQASWGPSD*NTNSNFHTNKEPKA Trigger: GGCCTTTGGTTCTTTGTTAGTGTGGAAGTTGCTGTTGGTGTTGCAATCGCTGGGACCCCAGGATGCTTGTTTGGCACTCAGTGCTGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR CCA 90 bp | AGCTCCGCTCTGCTCGCAGTAGCCGAGTCTCTAGACAACACAGCCTaGTTTCTGCAGAACTTGGCAACATTTTCTGAGCACCACAGTAAT | + |
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Preference number: 1 (lower is better) Translates to: SSALLAVAESLDNTA*FLQNLATFSEHHSN Trigger: ATTACTGTGGTGCTCAGAAAATGTTGCCAAGTTCTGCAGAAACCAGGCTGTGTTGTCTAGAGACTCGGCTACTGCGAGCAGAGCGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR CCA 90 bp | TCCAGTCTGAGGAACTACCTCCTTCTAAGAGCTTCTCAGTGTGCCTaGTCCCTGAAGTATTCTATGCTCAGTTACAGCTTCCTCCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SSLRNYLLLRASQCA*SLKYSMLSYSFLLS Trigger: GGACAGGAGGAAGCTGTAACTGAGCATAGAATACTTCAGGGACCAGGCACACTGAGAAGCTCTTAGAAGGAGGTAGTTCCTCAGACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR TCA 90 bp | CTTTTAAATTCCCAGAGTCCTCATTTGCTTTGGACACAACAGCACTaGGTGCCAAACAAGCATCCTGGGGTCCCAGCGATTGCAACACCA | + |
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Preference number: 1 (lower is better) Translates to: LLNSQSPHLLWTQQH*VPNKHPGVPAIATP Trigger: TGGTGTTGCAATCGCTGGGACCCCAGGATGCTTGTTTGGCACTCAGTGCTGTTGTGTCCAAAGCAAATGAGGACTCTGGGAATTTAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR GCA 90 bp | TTTGTCCAGTCTGAGGAACTACCTCCTTCTAAGAGCTTCTCAGTGTaGCTGGTCCCTGAAGTATTCTATGCTCAGTTACAGCTTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: FVQSEELPPSKSFSV*LVPEVFYAQLQLPP Trigger: AGGAGGAAGCTGTAACTGAGCATAGAATACTTCAGGGACCAGGCACACTGAGAAGCTCTTAGAAGGAGGTAGTTCCTCAGACTGGACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR CCA 90 bp | AAAGATCTGCCAAGGTTAAGGCAGGATTTTTATATACAGTACCATTaGCTTGTCCTGCCCACCCACCCACCCAGTTCGCTTAGCATTCAC | + |
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Preference number: 1 (lower is better) Translates to: KDLPRLRQDFYIQYH*LVLPTHPPSSLSIH Trigger: GTGAATGCTAAGCGAACTGGGTGGGTGGGTGGGCAGGACAAGCCAATGGTACTGTATATAAAAATCCTGCCTTAACCTTGGCAGATCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR TCA 90 bp | AGAAAGTGTGACTACATGATATGCGTATTAGGAAACAAACTGCTTTaGGTCAAATGGATCACGGAGACCCGACACACGGGAGCAGATCTG | + |
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Preference number: 1 (lower is better) Translates to: RKCDYMICVLGNKLL*VKWITETRHTGADL Trigger: CAGATCTGCTCCCGTGTGTCGGGTCTCCGTGATCCATTTGACTCAAAGCAGTTTGTTTCCTAATACGCATATCATGTAGTCACACTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR TCA 90 bp | CACACACACAAACACCCTTTGTTAAAGCATCTCTGTGAAACTCGTTaGGTACATGTCCTAAATGCAAATGCACTCACAGAGGTGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: HTHKHPLLKHLCETR*VHVLNANALTEVDG Trigger: CCCATCCACCTCTGTGAGTGCATTTGCATTTAGGACATGTACTCAACGAGTTTCACAGAGATGCTTTAACAAAGGGTGTTTGTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR GCA 90 bp | GATCGCCAAAGATCTGGGATATGTAAACTACATGATTACAGGCATTaGTCTAATCTTCGAGTGGAAAACCGAAGCGTCAGGACTAAGGTC | + |
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Preference number: 1 (lower is better) Translates to: DRQRSGICKLHDYRH*SNLRVENRSVRTKV Trigger: GACCTTAGTCCTGACGCTTCGGTTTTCCACTCGAAGATTAGAGCAATGCCTGTAATCATGTAGTTTACATATCCCAGATCTTTGGCGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR CCA 90 bp | GGATATGTAAACTACATGATTACAGGCATTGCTCTAATCTTCGAGTaGAAAACCGAAGCGTCAGGACTAAGGTCCAAGAGCTTTTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: GYVNYMITGIALIFE*KTEASGLRSKSFSC Trigger: ACAGGAAAAGCTCTTGGACCTTAGTCCTGACGCTTCGGTTTTCCACTCGAAGATTAGAGCAATGCCTGTAATCATGTAGTTTACATATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR TCA 90 bp | TCTGAAGCTAGAAACCAAAAACACACATTTACACATCAAAGGCTCTaGAAAGCCTACAGCAAGTCAGCTCTGCACAATACAGCATTTTCC | + |
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Preference number: 1 (lower is better) Translates to: SEARNQKHTFTHQRL*KAYSKSALHNTAFS Trigger: GGAAAATGCTGTATTGTGCAGAGCTGACTTGCTGTAGGCTTTTCAGAGCCTTTGATGTGTAAATGTGTGTTTTTGGTTTCTAGCTTCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR GCA 90 bp | AATAATAGCTTTCCTAATTTAAAAAGAGTCAGATACAGCTCCCTCTaGTCTAGTCTTAAACCTATTACAGCATTCTTTGAGTCTCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: NNSFPNLKRVRYSSL*SSLKPITAFFESLC Trigger: GCACAGAGACTCAAAGAATGCTGTAATAGGTTTAAGACTAGAGCAGAGGGAGCTGTATCTGACTCTTTTTAAATTAGGAAAGCTATTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR GCA 90 bp | CGCCAGCAGCCCACAGACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCGTGTGCGTGCGTGCATaGGCATGTGCGCTATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RQQPTDQRTSSQNGLLLLVCVRA*ACALSG Trigger: CCCTGATAGCGCACATGCGCATGCACGCACGCACAC...GAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGTCTGTGGGCTGCTGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR TCA 90 bp | CGCCAGCAGCCCACAGACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCGCAGGGCACTTCCAGTaGTCGCCAAAGATCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: RQQPTDQRTSSQNGLLLLAGHFQ*SPKIWD Trigger: ATCCCAGATCTTTGGCGATCACTGGAAGTGCCCTGC...GAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGTCTGTGGGCTGCTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGGAGACAATGAGTCCCCCTGGGGGATGAGTATGCGCCTGCGCGCAGCCTTGCTGAACATGGCCTGCTaGATTCTTCTATCATGTAAG | + |
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Preference number: 2 (lower is better) Translates to: TGDNESPWGMSMRLRAALLNMAC*ILLSCK Trigger: CTTACATGATAGAAGAATGCAGCAGGCCATGTTCAG...CAAGGCTGCGCGCAGGCGCATACTCATCCCCCAGGGGGACTCATTGTCTCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR CAA 90 bp | ATGCTGGCTGCTACCACCACCTCTGAAACCCATGGCTCACAGTGTTaGGTCAGGGCTGTGGACCATTTTCTCCAGCAAACTCACGCACAT | + |
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Preference number: 2 (lower is better) Translates to: MLAATTTSETHGSQC*VRAVDHFLQQTHAH Trigger: ATGTGCGTGAGTTTGCTGGAGAAAATGGTCCACAGCCCTGACCAAACACTGTGAGCCATGGGTTTCAGAGGTGGTGGTAGCAGCCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR CCA 90 bp | ACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCCAATGACTCTCAGAGGGAACCAAAGGCCCCCTaGCCTTCTCATCATGACGGG | + |
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Preference number: 2 (lower is better) Translates to: TKEQAARMAFSFSNDSQREPKAP*PSHHDG Trigger: CCCGTCATGATGAGAAGGCCAGGGGGCCTTTGGTTC...CCTCTGAGAGTCATTGGAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTTTGGACACAACAGCACTGAGTGCCAAACAAGCATCCTGGGGTCCCAGCTGTGTGTGGGTGGGGTaGGTACAGGAACATTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: FALDTTALSAKQASWGPSCVWVG*VQEHFE Trigger: CTCAAAATGTTCCTGTACCCACCCCACCCACACACA...GCTGGGACCCCAGGATGCTTGTTTGGCACTCAGTGCTGTTGTGTCCAAAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR GCA 90 bp | GAGTCTCTAGACAACACAGCCTGGTTTCTGCAGAACTTGGCAACATTTTCTGAGACCATTGGCTTGTCCTaGCCACCCACCCACCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: ESLDNTAWFLQNLATFSETIGLS*PPTHPV Trigger: AACTGGGTGGGTGGGTGGGCAGGACAAGCCAATGGT...CTCAGAAAATGTTGCCAAGTTCTGCAGAAACCAGGCTGTGTTGTCTAGAGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR GCA 90 bp | CGCCAGCAGCCCACAGACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCTTAGGAAGAGTTTGGTaGACACACAGCACAGTAACT | + |
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Preference number: 2 (lower is better) Translates to: RQQPTDQRTSSQNGLLLLLGRVW*THSTVT Trigger: AGTTACTGTGCTGTGTGTGCACCAAACTCTTCCTAA...GAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGTCTGTGGGCTGCTGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGGAGACAATGAGTCCCCCTGGGGGATGAGTATGCGCCTGCGCGCAGCCTTGCCTTCCATCACATGGTaGTGTTTAAGAATGTTAATT | + |
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Preference number: 2 (lower is better) Translates to: TGDNESPWGMSMRLRAALPSITW*CLRMLI Trigger: AATTAACATTCTTAAACAGCACCATGTGATGGAAGG...CAAGGCTGCGCGCAGGCGCATACTCATCCCCCAGGGGGACTCATTGTCTCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR CCA 90 bp | TTCCCCTTTGAAAGAAGCTGCTTATTCTGTTGGCACGATCCTCTATCACAACGCTCCCTGTTCCCATGCTaGCTGCTACCACCACCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FPFERSCLFCWHDPLSQRSLFPC*LLPPPL Trigger: CAGAGGTGGTGGTAGCAGCCAGCATGGGAACAGGGA...GCGTTGTGATAGAGGATCGTGCCAACAGAATAAGCAGCTTCTTTCAAAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR TCA 90 bp | TTCCCCTTTGAAAGAAGCTGCTTATTCTGTTGGCACGATCCTCTATCACAACGCTGCTACCACCACCTCTaGAACCCATGGCTCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: FPFERSCLFCWHDPLSQRCYHHL*NPWLTV Trigger: CACTGTGAGCCATGGGTTTCAGAGGTGGTGGTAGCA...GCGTTGTGATAGAGGATCGTGCCAACAGAATAAGCAGCTTCTTTCAAAGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGACCATTTTCTCCAGCAAACTCACGCACATACATCCTGACAGGGTCACCTATCATGTAAGCCCCTaGTCCTTCCTCAGCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: LWTIFSSKLTHIHPDRVTYHVSP*SFLSRT Trigger: AGTTCTGCTGAGGAAGGAGCAGGGGCTTACATGATA...GGTGACCCTGTCAGGATGTATGTGCGTGAGTTTGCTGGAGAAAATGGTCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR CAA 90 bp | ATGGCCTCACTGGTGAGCTGGTTTAGACTCTGGGAGAAATGGAGCTaGTTTAGTCGCCCTTACCATCACCAGAGAAACACTCAAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: MASLVSWFRLWEKWS*FSRPYHHQRNTQSR Trigger: TCTGCTTTGAGTGTTTCTCTGGTGATGGTAAGGGCGACTAAACAAGCTCCATTTCTCCCAGAGTCTAAACCAGCTCACCAGTGAGGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR TCA 90 bp | TTCCCCTTTGAAAGAAGCTGCTTATTCTGTTGGCACGATCCTCTATCACAACGCCGTTCTCTCAAGTACTaGGCCATCCATTCAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: FPFERSCLFCWHDPLSQRRSLKY*AIHSAP Trigger: GGGAGCTGAATGGATGGCTCAGTACTTGAGAGAACG...GCGTTGTGATAGAGGATCGTGCCAACAGAATAAGCAGCTTCTTTCAAAGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR TCA 90 bp | AGTAACTCCCTGGTTGAAGTCTGGAGTCGTCTGAACATGGCCTGCTGCATTCTTCACACAACAAATCCTTaGACGGCTCATTCACAACCA | + |
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Preference number: 2 (lower is better) Translates to: SNSLVEVWSRLNMACCILHTTNP*TAHSQP Trigger: TGGTTGTGAATGAGCCGTTCAAGGATTTGTTGTGTG...AAGAATGCAGCAGGCCATGTTCAGACGACTCCAGACTTCAACCAGGGAGTTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR TCA 90 bp | GCATTCTTCTATCATGTAAGCCCCTGCTCCTTCCTCAGCAGAACTTACCTCAGAACATCACCCACAGAGTaGGGTCTCGTTCTGTTGATA | + |
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Preference number: 2 (lower is better) Translates to: AFFYHVSPCSFLSRTYLRTSPTE*GLVLLI Trigger: TATCAACAGAACGAGACCTCACTCTGTGGGTGATGT...TCTGAGGTAAGTTCTGCTGAGGAAGGAGCAGGGGCTTACATGATAGAAGAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCAAACAAGCATCCTGGGGTCCCAGCGATTGCAACACCAACAGCAACTTCCAATAACAGAAGCACGTTaGCCACTAAAATCAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: CQTSILGSQRLQHQQQLPITEAR*PLKSAS Trigger: ACTTGCTGATTTTAGTGGCCAACGTGCTTCTGTTAT...TGGAAGTTGCTGTTGGTGTTGCAATCGCTGGGACCCCAGGATGCTTGTTTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR CAA 90 bp | GAGACTGCCTTGGGAGACGGAGCCAATAAACATCATATGCAGCTCTaGTCCCTTCCTCTGTTGATCTTCCAGAAAGCTAAAGTGAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: ETALGDGANKHHMQL*SLPLLIFQKAKVKL Trigger: TAGCTTCACTTTAGCTTTCTGGAAGATCAACAGAGGAAGGGACAAGAGCTGCATATGATGTTTATTGGCTCCGTCTCCCAAGGCAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCCAATGACTCTCAGAGGTATTACAGCATTCTTTaGGTCTCTGTGCACTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: TKEQAARMAFSFSNDSQRYYSIL*VSVHLA Trigger: TGCCAAGTGCACAGAGACTCAAAGAATGCTGTAATA...CCTCTGAGAGTCATTGGAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR CCA 90 bp | GCATTCTTCTATCATGTAAGCCCCTGCTCCTTCCTCAGCAGAACTTACCTCAGAGGTTTCTGCAGAACTTaGCAACATTTTCTGAGCACC | + |
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Preference number: 2 (lower is better) Translates to: AFFYHVSPCSFLSRTYLRGFCRT*QHFLST Trigger: GGTGCTCAGAAAATGTTGCCAAGTTCTGCAGAAACC...TCTGAGGTAAGTTCTGCTGAGGAAGGAGCAGGGGCTTACATGATAGAAGAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR CAA 90 bp | ATAAGACGTAAGAGAAACCCAAATCATCTTTATGCATTTAAAGGCTaGTATACACCCGTCCGCCATCAGATCAAGACGCCAGCAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: IRRKRNPNHLYAFKG*YTPVRHQIKTPAAH Trigger: GTGGGCTGCTGGCGTCTTGATCTGATGGCGGACGGGTGTATACAAGCCTTTAAATGCATAAAGATGATTTGGGTTTCTCTTACGTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCCAATGACTCTCAGAGGAGATACAGCTCCCTCTaGTCTAGTCTTAAACCTATT | + |
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Preference number: 2 (lower is better) Translates to: TKEQAARMAFSFSNDSQRRYSSL*SSLKPI Trigger: AATAGGTTTAAGACTAGAGCAGAGGGAGCTGTATCT...CCTCTGAGAGTCATTGGAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR GCA 90 bp | TTCCCCTTTGAAAGAAGCTGCTTATTCTGTTGGCACGATCCTCTATCACAACGCACACAGCCTGGTTTCTaGAGAACTTGGCAACATTTT | + |
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Preference number: 2 (lower is better) Translates to: FPFERSCLFCWHDPLSQRTQPGF*RTWQHF Trigger: AAAATGTTGCCAAGTTCTGCAGAAACCAGGCTGTGT...GCGTTGTGATAGAGGATCGTGCCAACAGAATAAGCAGCTTCTTTCAAAGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR CAA 90 bp | GATACAGCTCCCTCTGCTCTAGTCTTAAACCTATTACAGCATTCTTaGAGTCTCTGTGCACTTGGCATCAGCAATGACTGCAACAATCAT | + |
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Preference number: 2 (lower is better) Translates to: DTAPSALVLNLLQHS*SLCALGISNDCNNH Trigger: ATGATTGTTGCAGTCATTGCTGATGCCAAGTGCACAGAGACTCAAAGAATGCTGTAATAGGTTTAAGACTAGAGCAGAGGGAGCTGTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR CAA 90 bp | GACGGAGCCAATAAACATCATATGCAGCTCTTGTCCCTTCCTCTGTaGATCTTCCAGAAAGCTAAAGTGAAGCTACAAAACCTCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: DGANKHHMQLLSLPL*IFQKAKVKLQNLSF Trigger: GAAACTGAGGTTTTGTAGCTTCACTTTAGCTTTCTGGAAGATCAACAGAGGAAGGGACAAGAGCTGCATATGATGTTTATTGGCTCCGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR GCA 90 bp | AAACTTAGTAGAACAACATATTCTGCCAAATTCCCTCTTAGAATCTACTCTTGCTCACACTGGCTTGTGTaGGTGCGTGCATGCGCATGT | + |
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Preference number: 2 (lower is better) Translates to: KLSRTTYSAKFPLRIYSCSHWLV*VRACAC Trigger: ACATGCGCATGCACGCACGCACACAAGCCAGTGTGA...GCAAGAGTAGATTCTAAGAGGGAATTTGGCAGAATATGTTGTTCTACTAAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTCCTCAGCAGAACTTACCTCAGAATCACCTTCTAACATCACCCACAGAGTGTGACTACATGATATaGGTATTAGGAAACAAACTG | + |
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Preference number: 2 (lower is better) Translates to: LLPQQNLPQNHLLTSPTECDYMI*VLGNKL Trigger: CAGTTTGTTTCCTAATACGCATATCATGTAGTCACA...CTCTGTGGGTGATGTTAGAAGGTGATTCTGAGGTAAGTTCTGCTGAGGAAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR CCA 90 bp | TATCCAGTTTCTCATTTGTCAGAATACATTCTTAACAGTGACCATCATTTCCACAACAAGCAGCCAGAATaGCCTTCTCCTTCTCCAATG | + |
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Preference number: 2 (lower is better) Translates to: YPVSHLSEYILNSDHHFHNKQPE*PSPSPM Trigger: CATTGGAGAAGGAGAAGGCCATTCTGGCTGCTTGTT...GTGGAAATGATGGTCACTGTTAAGAATGTATTCTGACAAATGAGAAACTGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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| 3UTR-3UTR GCA 90 bp | TATCCAGTTTCTCATTTGTCAGAATACATTCTTAACAGTGACCATCATTTCCACACATCGCACACTCTATaGACACACATACACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: YPVSHLSEYILNSDHHFHTSHTL*THIHTH Trigger: GTGTGTGTGTATGTGTGTGCATAGAGTGTGCGATGT...GTGGAAATGATGGTCACTGTTAAGAATGTATTCTGACAAATGAGAAACTGGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR GCA 90 bp | AAACTTAGTAGAACAACATATTCTGCCAAATTCCCTCTTAGAATCTACTCTTGCCGTCTGAACATGGCCTaGTGCATTCTTCTATCATGT | + |
|
Preference number: 2 (lower is better) Translates to: KLSRTTYSAKFPLRIYSCRLNMA*CILLSC Trigger: ACATGATAGAAGAATGCAGCAGGCCATGTTCAGACG...GCAAGAGTAGATTCTAAGAGGGAATTTGGCAGAATATGTTGTTCTACTAAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR TCA 90 bp | AAACTTAGTAGAACAACATATTCTGCCAAATTCCCTCTTAGAATCTACTCTTGCTATTGTTGTGGCTGTTaGAAAACTGTTGACCCTACC | + |
|
Preference number: 2 (lower is better) Translates to: KLSRTTYSAKFPLRIYSCYCCGC*KTVDPT Trigger: GGTAGGGTCAACAGTTTTTCAACAGCCACAACAATA...GCAAGAGTAGATTCTAAGAGGGAATTTGGCAGAATATGTTGTTCTACTAAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CCA 90 bp | TTCACAACCAATAACTGTAAATCGTCTGAGAAACCTGCTATTGACTCATTCCTTGAGACACGTAAGCAATaGTGTACTAAATACACAGGT | + |
|
Preference number: 2 (lower is better) Translates to: FTTNNCKSSEKPAIDSFLETRKQ*CTKYTG Trigger: ACCTGTGTATTTAGTACACCATTGCTTACGTGTCTC...AAGGAATGAGTCAATAGCAGGTTTCTCAGACGATTTACAGTTATTGGTTGTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CCA 90 bp | TATCCAGTTTCTCATTTGTCAGAATACATTCTTAACAGTGACCATCATTTCCACATGGAAAATCCGTTTTaGTGTGAGGTTGTTAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: YPVSHLSEYILNSDHHFHMENPF*CEVVRN Trigger: GTTTCTAACAACCTCACACCAAAACGGATTTTCCAT...GTGGAAATGATGGTCACTGTTAAGAATGTATTCTGACAAATGAGAAACTGGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR GCA 90 bp | AAACTTAGTAGAACAACATATTCTGCCAAATTCCCTCTTAGAATCTACTCTTGCACCACCTTTAACATTTaGATATGTAGCAGTAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: KLSRTTYSAKFPLRIYSCTTFNI*ICSSKL Trigger: CAGTTTACTGCTACATATGCAAATGTTAAAGGTGGT...GCAAGAGTAGATTCTAAGAGGGAATTTGGCAGAATATGTTGTTCTACTAAGTTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CCA 90 bp | TATCCAGTTTCTCATTTGTCAGAATACATTCTTAACAGTGACCATCATTTCCACAAAGCATTACAAAAATaGAAGGAGATATTCCATGGC | + |
|
Preference number: 2 (lower is better) Translates to: YPVSHLSEYILNSDHHFHKALQK*KEIFHG Trigger: GCCATGGAATATCTCCTTCCATTTTTGTAATGCTTT...GTGGAAATGATGGTCACTGTTAAGAATGTATTCTGACAAATGAGAAACTGGATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CAA 90 bp | CGCCAGCAGCCCACAGACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCTACAGTACCATTGGCTaGTCCTGCCCACCCACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RQQPTDQRTSSQNGLLLLYSTIG*SCPPTH Trigger: GTGGGTGGGTGGGCAGGACAAGCCAATGGTACTGTA...GAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGTCTGTGGGCTGCTGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGAGACAATGAGTCCCCCTGGGGGATGAGTATGCGCCTGCGCGCAGCCTTGTGGTTTCTGCAGAACTaGGCAACATTTTCTGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: TGDNESPWGMSMRLRAALWFLQN*ATFSEH Trigger: GTGCTCAGAAAATGTTGCCAAGTTCTGCAGAAACCA...CAAGGCTGCGCGCAGGCGCATACTCATCCCCCAGGGGGACTCATTGTCTCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR TCA 72 bp | AATCCCTGTTCCCATGCTGGCTGCTACCACCACCTCTaGAACCCATGGCTCACAGTGTTTGGTCAGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: NPCSHAGCYHHL*NPWLTVFGQGC Trigger: ACAGCCCTGACCAAACACTGTGAGCCATGGGTTTCAGAGGTGGTGGTAGCAGCCAGCATGGGAACAGGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTTTGGACACAACAGCACTGAGTGCCAAACAAGCATCCTGGGGTCCCAGCGGTCACCAAGGCCCTTaGTCCAGTCTGAGGAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: FALDTTALSAKQASWGPSGHQGP*SSLRNY Trigger: GTAGTTCCTCAGACTGGACAAAGGGCCTTGGTGACC...GCTGGGACCCCAGGATGCTTGTTTGGCACTCAGTGCTGTTGTGTCCAAAGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR GCA 72 bp | TCCTGGGAACTGAACCCACGTCCTCAGCAAGAGCAGTaGGTTCTCTCAAGTACTGAGCCATCCATTCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SWELNPRPQQEQ*VLSSTEPSIQL Trigger: GAGCTGAATGGATGGCTCAGTACTTGAGAGAACGCACTGCTCTTGCTGAGGACGTGGGTTCAGTTCCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CCA 72 bp | AGCAACTTCCACACTAACAAAGAACCAAAGGCCCCCTaGCCTTCTCATCATGACGGGCAGCACTCTCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SNFHTNKEPKAP*PSHHDGQHSQA Trigger: GGCTTGAGAGTGCTGCCCGTCATGATGAGAAGGCCAGGGGGCCTTTGGTTCTTTGTTAGTGTGGAAGTTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGAGACAATGAGTCCCCCTGGGGGATGAGTATGCGCCTGCGCGCAGCCTTGACACACAAACACCCTTaGTTAAAGCATCTCTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TGDNESPWGMSMRLRAALTHKHP*LKHLCE Trigger: TTCACAGAGATGCTTTAACAAAGGGTGTTTGTGTGT...CAAGGCTGCGCGCAGGCGCATACTCATCCCCCAGGGGGACTCATTGTCTCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR TCA 72 bp | TCCCAGAGTCCTCATTTGCTTTGGACACAACAGCACTaGGTGCCAAACAAGCATCCTGGGGTCCCAGCGATT | + |
|
Preference number: 3 (lower is better) Translates to: SQSPHLLWTQQH*VPNKHPGVPAI Trigger: AATCGCTGGGACCCCAGGATGCTTGTTTGGCACTCAGTGCTGTTGTGTCCAAAGCAAATGAGGACTCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR TCA 72 bp | AGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCCAATaGCTCTCAGAGGCTGATGCAAACTCTGGCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RTSSQNGLLLLQ*LSEADANSGRA Trigger: TGCCCTGCCAGAGTTTGCATCAGCCTCTGAGAGTCATTGGAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CCA 72 bp | CTACCACCACCTCTGAAACCCATGGCTCACAGTGTTTaGTCAGGGCTGTGGACCATTTTCTCCAGCAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: LPPPLKPMAHSV*SGLWTIFSSKL Trigger: GAGTTTGCTGGAGAAAATGGTCCACAGCCCTGACCAAACACTGTGAGCCATGGGTTTCAGAGGTGGTGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCCAATGACTCTCAGAGGCTGGGGTCCCAGCGATaGCAACACCAACAGCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: TKEQAARMAFSFSNDSQRLGSQR*QHQQQL Trigger: AAGTTGCTGTTGGTGTTGCAATCGCTGGGACCCCAG...CCTCTGAGAGTCATTGGAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CAA 90 bp | CGCCAGCAGCCCACAGACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCAGGAAACAAACTGCTTaGAGTCAAATGGATCACGGA | + |
|
Preference number: 3 (lower is better) Translates to: RQQPTDQRTSSQNGLLLLRKQTA*SQMDHG Trigger: TCCGTGATCCATTTGACTCAAAGCAGTTTGTTTCCT...GAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGTCTGTGGGCTGCTGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR GCA 72 bp | GGCAGGATTTTTATATACAGTACCATTGGCTTGTCCTaGCCACCCACCCACCCAGTTCGCTTAGCATTCACC | + |
|
Preference number: 3 (lower is better) Translates to: GRIFIYSTIGLS*PPTHPVRLAFT Trigger: GGTGAATGCTAAGCGAACTGGGTGGGTGGGTGGGCAGGACAAGCCAATGGTACTGTATATAAAAATCCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR GCA 72 bp | CTGGTTGAAGTCTGGAGTCGTCTGAACATGGCCTGCTaGATTCTTCTATCATGTAAGCCCCTGCTCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LVEVWSRLNMAC*ILLSCKPLLLP Trigger: AGGAAGGAGCAGGGGCTTACATGATAGAAGAATGCAGCAGGCCATGTTCAGACGACTCCAGACTTCAACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CCA 72 bp | CTGCTCGCAGTAGCCGAGTCTCTAGACAACACAGCCTaGTTTCTGCAGAACTTGGCAACATTTTCTGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLAVAESLDNTA*FLQNLATFSEH Trigger: GTGCTCAGAAAATGTTGCCAAGTTCTGCAGAAACCAGGCTGTGTTGTCTAGAGACTCGGCTACTGCGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR TCA 72 bp | AAGGGATACGAGAGGCAAACCACGGCTTTGTCACGGTaGAGTAGTTCTCATTCTCCACCCAGAAGGTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KGYERQTTALSR*SSSHSPPRRCE Trigger: TTCACACCTTCTGGGTGGAGAATGAGAACTACTTCACCGTGACAAAGCCGTGGTTTGCCTCTCGTATCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224368.2 |
||
| 3UTR GCA 72 bp | TATCAGCAAGTACTTAGTCACACTGGCTTGTGTGCGTaGGTGCATGCGCATGTGCGCTATCAGGGGTATTAT | + |
|
Preference number: 3 (lower is better) Translates to: YQQVLSHTGLCA*VHAHVRYQGYY Trigger: ATAATACCCCTGATAGCGCACATGCGCATGCACGCACGCACACAAGCCAGTGTGACTAAGTACTTGCTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR GCA 72 bp | ACATGGCCTGCTGCATTCTTCTATCATGTAAGCCCCTaGTCCTTCCTCAGCAGAACTTACCTCAGAATCACC | + |
|
Preference number: 3 (lower is better) Translates to: TWPAAFFYHVSP*SFLSRTYLRIT Trigger: GGTGATTCTGAGGTAAGTTCTGCTGAGGAAGGAGCAGGGGCTTACATGATAGAAGAATGCAGCAGGCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR GCA 72 bp | CTGAGTGCCAAACAAGCATCCTGGGGTCCCAGCGATTaGAACACCAACAGCAACTTCCACACTAACAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSAKQASWGPSD*NTNSNFHTNKE Trigger: TTCTTTGTTAGTGTGGAAGTTGCTGTTGGTGTTGCAATCGCTGGGACCCCAGGATGCTTGTTTGGCACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CCA 72 bp | CCAAGGTTAAGGCAGGATTTTTATATACAGTACCATTaGCTTGTCCTGCCCACCCACCCACCCAGTTCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PRLRQDFYIQYH*LVLPTHPPSSL Trigger: AAGCGAACTGGGTGGGTGGGTGGGCAGGACAAGCCAATGGTACTGTATATAAAAATCCTGCCTTAACCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CCA 72 bp | GACCTAAGACTTACATCTACCAAAAACAGAGCAACCTaGGGCGATGTAGGTCAAATGCAGCTGAGCTCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: DLRLTSTKNRAT*GDVGQMQLSSA Trigger: AGCGGAGCTCAGCTGCATTTGACCTACATCGCCCCAGGTTGCTCTGTTTTTGGTAGATGTAAGTCTTAGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CCA 72 bp | CTGAAACCCATGGCTCACAGTGTTTGGTCAGGGCTGTaGACCATTTTCTCCAGCAAACTCACGCACATACAT | + |
|
Preference number: 3 (lower is better) Translates to: LKPMAHSVWSGL*TIFSSKLTHIH Trigger: ATGTATGTGCGTGAGTTTGCTGGAGAAAATGGTCCACAGCCCTGACCAAACACTGTGAGCCATGGGTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CCA 72 bp | CAGATGCTTACGTTGTTTCCCATCCAGAGACTGCCTTaGGAGACGGAGCCAATAAACATCATATGCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMLTLFPIQRLP*ETEPINIICSS Trigger: AGAGCTGCATATGATGTTTATTGGCTCCGTCTCCCAAGGCAGTCTCTGGATGGGAAACAACGTAAGCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR TCA 72 bp | GCATTCTTTGAGTCTCTGTGCACTTGGCATCAGCAATaGCTGCAACAATCATTAGACCAGCTGCAACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AFFESLCTWHQQ*LQQSLDQLQLA Trigger: AGCCAGTTGCAGCTGGTCTAATGATTGTTGCAGTCATTGCTGATGCCAAGTGCACAGAGACTCAAAGAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR GCA 72 bp | CTTCTAATGTACATCCAAACCCTGGAGCATCGAGCCTaGGACTGTGTATATATGCTGCAGAGGCTGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLMYIQTLEHRA*DCVYMLQRLTK Trigger: TTTTGTCAGCCTCTGCAGCATATATACACAGTCGCAGGCTCGATGCTCCAGGGTTTGGATGTACATTAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CCA 72 bp | AGGAACTACCTCCTTCTAAGAGCTTCTCAGTGTGCCTaGTCCCTGAAGTATTCTATGCTCAGTTACAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RNYLLLRASQCA*SLKYSMLSYSF Trigger: GAAGCTGTAACTGAGCATAGAATACTTCAGGGACCAGGCACACTGAGAAGCTCTTAGAAGGAGGTAGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CCA 72 bp | GCCTGTTTCCCCTTTGAAAGAAGCTGCTTATTCTGTTaGCACGATCCTCTATCACAACGCACCTTCACTACT | + |
|
Preference number: 3 (lower is better) Translates to: ACFPFERSCLFC*HDPLSQRTFTT Trigger: AGTAGTGAAGGTGCGTTGTGATAGAGGATCGTGCCAACAGAATAAGCAGCTTCTTTCAAAGGGGAAACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCTCTAGACAACACAGCCTGGTTTCTGCAGAACTTGGCAACATTTTCTGAGCTGAGAAACCTGCTATaGACTCATTCCTTTGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: ESLDNTAWFLQNLATFSELRNLL*THSFGS Trigger: GGATCCAAAGGAATGAGTCAATAGCAGGTTTCTCAG...CTCAGAAAATGTTGCCAAGTTCTGCAGAAACCAGGCTGTGTTGTCTAGAGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR TCA 72 bp | GACTACATGATATGCGTATTAGGAAACAAACTGCTTTaGGTCAAATGGATCACGGAGACCCGACACACGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DYMICVLGNKLL*VKWITETRHTG Trigger: TCCCGTGTGTCGGGTCTCCGTGATCCATTTGACTCAAAGCAGTTTGTTTCCTAATACGCATATCATGTAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCCTTTGAAAGAAGCTGCTTATTCTGTTGGCACGATCCTCTATCACAACGCGCCTTTGAGTGGTTATaGTTGTGGCTGTTGAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: FPFERSCLFCWHDPLSQRAFEWL*LWLLKN Trigger: GTTTTTCAACAGCCACAACAATAACCACTCAAAGGC...GCGTTGTGATAGAGGATCGTGCCAACAGAATAAGCAGCTTCTTTCAAAGGGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR TCA 72 bp | AACGAGGGCATAAAAACAACTAGCCTGTTTCCCCTTTaGAAGAAGCTGCTTATTCTGTTGGCACGATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NEGIKTTSLFPL*KKLLILLARSS Trigger: AGAGGATCGTGCCAACAGAATAAGCAGCTTCTTTCAAAGGGGAAACAGGCTAGTTGTTTTTATGCCCTCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTTCCTCAGCAGAACTTACCTCAGAATCACCTTCTAACATCACCCACAGAGAGCTTTCAAGAAGAATaGTCCTACTCTTACATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLPQQNLPQNHLLTSPTESFQEE*SYSYMH Trigger: ATGCATGTAAGAGTAGGACAATTCTTCTTGAAAGCT...CTCTGTGGGTGATGTTAGAAGGTGATTCTGAGGTAAGTTCTGCTGAGGAAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR GCA 72 bp | AGATCTGGGATATGTAAACTACATGATTACAGGCATTaGTCTAATCTTCGAGTGGAAAACCGAAGCGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RSGICKLHDYRH*SNLRVENRSVR Trigger: CCTGACGCTTCGGTTTTCCACTCGAAGATTAGAGCAATGCCTGTAATCATGTAGTTTACATATCCCAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CAA 90 bp | TATCCAGTTTCTCATTTGTCAGAATACATTCTTAACAGTGACCATCATTTCCACCATCATATGCAGCTCTaGTCCCTTCCTCTGTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: YPVSHLSEYILNSDHHFHHHMQL*SLPLLI Trigger: GATCAACAGAGGAAGGGACAAGAGCTGCATATGATG...GTGGAAATGATGGTCACTGTTAAGAATGTATTCTGACAAATGAGAAACTGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR TCA 72 bp | AAACACCCTTTGTTAAAGCATCTCTGTGAAACTCGTTaGGTACATGTCCTAAATGCAAATGCACTCACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KHPLLKHLCETR*VHVLNANALTE Trigger: CTCTGTGAGTGCATTTGCATTTAGGACATGTACTCAACGAGTTTCACAGAGATGCTTTAACAAAGGGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR GCA 72 bp | ATCAAAGGCTCTGAAAAGCCTACAGCAAGTCAGCTCTaGACAATACAGCATTTTCCAAACTTAGTAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: IKGSEKPTASQL*TIQHFPNLVEQ Trigger: TTGTTCTACTAAGTTTGGAAAATGCTGTATTGTGCAGAGCTGACTTGCTGTAGGCTTTTCAGAGCCTTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR GCA 72 bp | GTAAAATACATTCACAGTAGGCAAGGCTATGGTATTTaGACACTAGAACAGATGCTTACGTTGTTTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: VKYIHSRQGYGI*TLEQMLTLFPI Trigger: GATGGGAAACAACGTAAGCATCTGTTCTAGTGTGCAAATACCATAGCCTTGCCTACTGTGAATGTATTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR-3UTR CAA 90 bp | AAACTTAGTAGAACAACATATTCTGCCAAATTCCCTCTTAGAATCTACTCTTGCAATAACAGAAGCACGTaGGCCACTAAAATCAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KLSRTTYSAKFPLRIYSCNNRST*ATKISK Trigger: CTTGCTGATTTTAGTGGCCAACGTGCTTCTGTTATT...GCAAGAGTAGATTCTAAGAGGGAATTTGGCAGAATATGTTGTTCTACTAAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR GCA 72 bp | TTTCCTAATTTAAAAAGAGTCAGATACAGCTCCCTCTaGTCTAGTCTTAAACCTATTACAGCATTCTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: FPNLKRVRYSSL*SSLKPITAFFE Trigger: CTCAAAGAATGCTGTAATAGGTTTAAGACTAGAGCAGAGGGAGCTGTATCTGACTCTTTTTAAATTAGGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGACAATGAGTCCCCCTGGGGGATGAGTATGCGCCTGCGCGCAGCCTTGCATAGGCGTCCAAGGTaGAAGGCGTGTCACCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGDNESPWGMSMRLRAALHRRPR*KACHQR Trigger: TCTTTGGTGACACGCCTTCCACCTTGGACGCCTATG...CAAGGCTGCGCGCAGGCGCATACTCATCCCCCAGGGGGACTCATTGTCTCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR TCA 90 bp | GCATTCTTCTATCATGTAAGCCCCTGCTCCTTCCTCAGCAGAACTTACCTCAGACTCCTCCCCAGCAGCTaGGCTCCATGGGGGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFFYHVSPCSFLSRTYLRLLPSS*APWGPP Trigger: TGGCGGCCCCCATGGAGCTCAGCTGCTGGGGAGGAG...TCTGAGGTAAGTTCTGCTGAGGAAGGAGCAGGGGCTTACATGATAGAAGAATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CAA 72 bp | TCAGGACTAAGGTCCAAGAGCTTTTCCTGTGGTTGGTaGCTCACCATTACTCCAGCACCCAAACCGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGLRSKSFSCGW*LTITPAPKPHG Trigger: GCCGTGCGGTTTGGGTGCTGGAGTAATGGTGAGCAACCAACCACAGGAAAAGCTCTTGGACCTTAGTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CAA 72 bp | GCTACCACCACCTCTGAAACCCATGGCTCACAGTGTTaGGTCAGGGCTGTGGACCATTTTCTCCAGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ATTTSETHGSQC*VRAVDHFLQQT Trigger: AGTTTGCTGGAGAAAATGGTCCACAGCCCTGACCAAACACTGTGAGCCATGGGTTTCAGAGGTGGTGGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CAA 72 bp | AGCGTCAGGACTAAGGTCCAAGAGCTTTTCCTGTGGTaGGTTGCTCACCATTACTCCAGCACCCAAACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVRTKVQELFLW*VAHHYSSTQTA Trigger: TGCGGTTTGGGTGCTGGAGTAATGGTGAGCAACCAACCACAGGAAAAGCTCTTGGACCTTAGTCCTGACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR TCA 90 bp | GAAGGTGTGAAGCACAGCAGGGAGAAGTTTCTCTTCCAGGAGAGCGATGTAAGCTGGTACATCACCTCTTaGCCCTCTCCAGGTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: EGVKHSREKFLFQESDVSWYITS*PSPGVI Trigger: GATAACACCTGGAGAGGGTCAAGAGGTGATGTACCA...GCTTACATCGCTCTCCTGGAAGAGAAACTTCTCCCTGCTGTGCTTCACACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224368.2 |
||
| CDS-3UTR TCA 90 bp | GCATTCTTCTATCATGTAAGCCCCTGCTCCTTCCTCAGCAGAACTTACCTCAGATCCACCCAGAAGGTGTaGAGCACAGCAGGGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AFFYHVSPCSFLSRTYLRSTQKV*STAGRS Trigger: ACTTCTCCCTGCTGTGCTTCACACCTTCTGGGTGGA...TCTGAGGTAAGTTCTGCTGAGGAAGGAGCAGGGGCTTACATGATAGAAGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR TCA 90 bp | TGCCAAACAAGCATCCTGGGGTCCCAGCGATTGCAACACCAACAGCAACTTCCAACGGCTTTGTCACGGTaGAGTAGTTCTCATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CQTSILGSQRLQHQQQLPTALSR*SSSHSP Trigger: TGGAGAATGAGAACTACTTCACCGTGACAAAGCCGT...TGGAAGTTGCTGTTGGTGTTGCAATCGCTGGGACCCCAGGATGCTTGTTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CAA 72 bp | GCCAAGGTTAAGGCAGGATTTTTATATACAGTACCATaGGCTTGTCCTGCCCACCCACCCACCCAGTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKVKAGFLYTVP*ACPAHPPTQFA Trigger: AGCGAACTGGGTGGGTGGGTGGGCAGGACAAGCCAATGGTACTGTATATAAAAATCCTGCCTTAACCTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR TCA 90 bp | ACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCCAATGACTCTCAGAGGTGGTACATCACCTCTTaGCCCTCTCCAGGTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: TKEQAARMAFSFSNDSQRWYITS*PSPGVI Trigger: GATAACACCTGGAGAGGGTCAAGAGGTGATGTACCA...CCTCTGAGAGTCATTGGAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR GCA 90 bp | TTTGCTTTGGACACAACAGCACTGAGTGCCAAACAAGCATCCTGGGGTCCCAGCATTACTCTCCTCTTCTaGTGGAGTCAGTTTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FALDTTALSAKQASWGPSITLLF*WSQFEG Trigger: ACCCTCAAACTGACTCCAGCAGAAGAGGAGAGTAAT...GCTGGGACCCCAGGATGCTTGTTTGGCACTCAGTGCTGTTGTGTCCAAAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CAA 72 bp | ACAGATGCTTACGTTGTTTCCCATCCAGAGACTGCCTaGGGAGACGGAGCCAATAAACATCATATGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDAYVVSHPETA*GDGANKHHMQL Trigger: GAGCTGCATATGATGTTTATTGGCTCCGTCTCCCAAGGCAGTCTCTGGATGGGAAACAACGTAAGCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTTTGAAAGAAGCTGCTTATTCTGTTGGCACGATCCTCTATCACAACGCTGCCCCTTGTTTTGCTaGGAGCTCACAGTCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FPFERSCLFCWHDPLSQRCPLFC*ELTVSI Trigger: AATGCTGACTGTGAGCTCTCAGCAAAACAAGGGGCA...GCGTTGTGATAGAGGATCGTGCCAACAGAATAAGCAGCTTCTTTCAAAGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCTAGACAACACAGCCTGGTTTCTGCAGAACTTGGCAACATTTTCTGAGCAGGGTGACAGCAGCTaGAAGGAATTACTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESLDNTAWFLQNLATFSEQGDSS*KELLSS Trigger: AGAGGAGAGTAATTCCTTGCAGCTGCTGTCACCCTG...CTCAGAAAATGTTGCCAAGTTCTGCAGAAACCAGGCTGTGTTGTCTAGAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR GCA 90 bp | TTCCCCTTTGAAAGAAGCTGCTTATTCTGTTGGCACGATCCTCTATCACAACGCAGCTGCGTGAGCTTCTaGAGGTTTGCATCTACCATT | + |
|
Preference number: 4 (lower is better) Translates to: FPFERSCLFCWHDPLSQRSCVSF*RFASTI Trigger: AATGGTAGATGCAAACCTGCAGAAGCTCACGCAGCT...GCGTTGTGATAGAGGATCGTGCCAACAGAATAAGCAGCTTCTTTCAAAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR TCA 90 bp | ACCAAAGAACAAGCAGCCAGAATGGCCTTCTCCTTCTCCAATGACTCTCAGAGGAGATGCTTCTGTAAGTaGACTTTGGGAAAACTCACT | + |
|
Preference number: 4 (lower is better) Translates to: TKEQAARMAFSFSNDSQRRCFCK*TLGKLT Trigger: AGTGAGTTTTCCCAAAGTTCACTTACAGAAGCATCT...CCTCTGAGAGTCATTGGAGAAGGAGAAGGCCATTCTGGCTGCTTGTTCTTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CCA 90 bp | AGATACAGCTCCCTCTGCTCTAGTCTTAAACCTATTACAGCATTCTTTGAGTCTACTCTCCTCTTCTGCTaGAGTCAGTTTGAGGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RYSSLCSSLKPITAFFESTLLFC*SQFEGR Trigger: CCGACCCTCAAACTGACTCCAGCAGAAGAGGAGAGT...AGACTCAAAGAATGCTGTAATAGGTTTAAGACTAGAGCAGAGGGAGCTGTATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CAA 72 bp | CCCTCTGCTCTAGTCTTAAACCTATTACAGCATTCTTaGAGTCTCTGTGCACTTGGCATCAGCAATGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSALVLNLLQHS*SLCALGISNDC Trigger: GCAGTCATTGCTGATGCCAAGTGCACAGAGACTCAAAGAATGCTGTAATAGGTTTAAGACTAGAGCAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CAA 72 bp | TTGGGAGACGGAGCCAATAAACATCATATGCAGCTCTaGTCCCTTCCTCTGTTGATCTTCCAGAAAGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGDGANKHHMQL*SLPLLIFQKAK Trigger: TTTAGCTTTCTGGAAGATCAACAGAGGAAGGGACAAGAGCTGCATATGATGTTTATTGGCTCCGTCTCCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CCA 90 bp | AAACTTAGTAGAACAACATATTCTGCCAAATTCCCTCTTAGAATCTACTCTTGCGCGCGCCAGAAAACTTaGCATAAGCCAGCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KLSRTTYSAKFPLRIYSCARQKT*HKPAPP Trigger: TGGTGGTGCTGGCTTATGCCAAGTTTTCTGGCGCGC...GCAAGAGTAGATTCTAAGAGGGAATTTGGCAGAATATGTTGTTCTACTAAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CAA 72 bp | TTTAAGCCTTTTAAATTCCCAGAGTCCTCATTTGCTTaGGACACAACAGCACTGAGTGCCAAACAAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FKPFKFPESSFA*DTTALSAKQAS Trigger: GGATGCTTGTTTGGCACTCAGTGCTGTTGTGTCCAAAGCAAATGAGGACTCTGGGAATTTAAAAGGCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CAA 72 bp | AAGAGAAACCCAAATCATCTTTATGCATTTAAAGGCTaGTATACACCCGTCCGCCATCAGATCAAGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRNPNHLYAFKG*YTPVRHQIKTP Trigger: TGGCGTCTTGATCTGATGGCGGACGGGTGTATACAAGCCTTTAAATGCATAAAGATGATTTGGGTTTCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR GCA 90 bp | TATCCAGTTTCTCATTTGTCAGAATACATTCTTAACAGTGACCATCATTTCCACAGAAGCGGCACAGGTTaGAGAGCTGTTTCAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: YPVSHLSEYILNSDHHFHRSGTG*RAVSDA Trigger: AGCATCTGAAACAGCTCTGCAACCTGTGCCGCTTCT...GTGGAAATGATGGTCACTGTTAAGAATGTATTCTGACAAATGAGAAACTGGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR GCA 90 bp | TTCACAACCAATAACTGTAAATCGTCTGAGAAACCTGCTATTGACTCATTCCTTGGCTTTGGCGGAGGTTaGCATCCATCTTCTCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: FTTNNCKSSEKPAIDSFLGFGGG*HPSSQL Trigger: TAATTGAGAAGATGGATGGCAACCTCCGCCAAAGCC...AAGGAATGAGTCAATAGCAGGTTTCTCAGACGATTTACAGTTATTGGTTGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR TCA 90 bp | TTCACAACCAATAACTGTAAATCGTCTGAGAAACCTGCTATTGACTCATTCCTTTATTTACAAGCTGCGTaGGCTTCTGCAGGTTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTTNNCKSSEKPAIDSFLYLQAA*ASAGLH Trigger: ATGCAAACCTGCAGAAGCTCACGCAGCTTGTAAATA...AAGGAATGAGTCAATAGCAGGTTTCTCAGACGATTTACAGTTATTGGTTGTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR GCA 90 bp | CTGGTTCCTAAAATCGGCATCAGACTTCTTAAAAGAATAAGGTCTCAGCCAAAATCCTTATTTACAAGCTaGGTGAGCTTCTGCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVPKIGIRLLKRIRSQPKSLFTS*VSFCRF Trigger: AAACCTGCAGAAGCTCACGCAGCTTGTAAATAAGGA...TTTTGGCTGAGACCTTATTCTTTTAAGAAGTCTGATGCCGATTTTAGGAACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| 3UTR CAA 72 bp | AATAAACATCATATGCAGCTCTTGTCCCTTCCTCTGTaGATCTTCCAGAAAGCTAAAGTGAAGCTACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NKHHMQLLSLPL*IFQKAKVKLQN Trigger: GTTTTGTAGCTTCACTTTAGCTTTCTGGAAGATCAACAGAGGAAGGGACAAGAGCTGCATATGATGTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR GCA 90 bp | TATCCAGTTTCTCATTTGTCAGAATACATTCTTAACAGTGACCATCATTTCCACATCTCTATATATCTGTaGTTCCACTTCTTGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: YPVSHLSEYILNSDHHFHISIYL*FHFLDM Trigger: CATGTCCAAGAAGTGGAAGCACAGATATATAGAGAT...GTGGAAATGATGGTCACTGTTAAGAATGTATTCTGACAAATGAGAAACTGGATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CAA 90 bp | ACTGGAGACAATGAGTCCCCCTGGGGGATGAGTATGCGCCTGCGCGCAGCCTTGTTGGTACATCACCTCTaGACCCTCTCCAGGTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: TGDNESPWGMSMRLRAALLVHHL*TLSRCY Trigger: ATAACACCTGGAGAGGGTCAAGAGGTGATGTACCAA...CAAGGCTGCGCGCAGGCGCATACTCATCCCCCAGGGGGACTCATTGTCTCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS CCA 90 bp | CTGCGTGAGCTTCTGCAGGTTTGCATCTACCATTTCTTGTCCAGCTaGGGAGACACCTCCAGGGCCTGGCCTAAAGTAGCTGTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRELLQVCIYHFLSS*GDTSRAWPKVAVQD Trigger: ATCCTGGACAGCTACTTTAGGCCAGGCCCTGGAGGTGTCTCCCCAGCTGGACAAGAAATGGTAGATGCAAACCTGCAGAAGCTCACGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CAA 90 bp | GGATTTTTATATACAGTACCATTGGCTTGTCCTGCCCACCCACCCACCCAGTTCTCTGCTGGAGTCAGTTaGAGGGTCGGCAGCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GFLYTVPLACPAHPPTQFSAGVS*RVGSFR Trigger: TCGGAAGCTGCCGACCCTCAAACTGACTCCAGCAGA...GAACTGGGTGGGTGGGTGGGCAGGACAAGCCAATGGTACTGTATATAAAAATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CAA 90 bp | TTTGCTTTGGACACAACAGCACTGAGTGCCAAACAAGCATCCTGGGGTCCCAGCGGGGAGGTTCTCCCCTaGTCAAGAGAATCCTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: FALDTTALSAKQASWGPSGEVLP*SRESYS Trigger: TGAATAGGATTCTCTTGACAAGGGGAGAACCTCCCC...GCTGGGACCCCAGGATGCTTGTTTGGCACTCAGTGCTGTTGTGTCCAAAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CAA 90 bp | GGATTTTTATATACAGTACCATTGGCTTGTCCTGCCCACCCACCCACCCAGTTCAAGAAGCTGAGGGCTTaGGCGGAGGTTGCCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GFLYTVPLACPAHPPTQFKKLRA*AEVAIH Trigger: ATGGATGGCAACCTCCGCCAAAGCCCTCAGCTTCTT...GAACTGGGTGGGTGGGTGGGCAGGACAAGCCAATGGTACTGTATATAAAAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CAA 90 bp | GAAGGTGTGAAGCACAGCAGGGAGAAGTTTCTCTTCCAGGAGAGCGATGTAAGCTTGGTACATCACCTCTaGACCCTCTCCAGGTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: EGVKHSREKFLFQESDVSLVHHL*TLSRCY Trigger: ATAACACCTGGAGAGGGTCAAGAGGTGATGTACCAA...GCTTACATCGCTCTCCTGGAAGAGAAACTTCTCCCTGCTGTGCTTCACACCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224368.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTTTGAAAGAAGCTGCTTATTCTGTTGGCACGATCCTCTATCACAACGCTGCATCTACCATTTCTaGTCCAGCTGGGGAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: FPFERSCLFCWHDPLSQRCIYHF*SSWGDT Trigger: GGTGTCTCCCCAGCTGGACAAGAAATGGTAGATGCA...GCGTTGTGATAGAGGATCGTGCCAACAGAATAAGCAGCTTCTTTCAAAGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCCGGCAGGATTAAACTCAGAGGGAAAGGGATACGAGAGGCAAACCACGGTGTTATCTATAATATaGATTTTCAAGGGCGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFPAGLNSEGKGYERQTTVLSII*IFKGAP Trigger: TGGCGCGCCCTTGAAAATCAATATTATAGATAACAC...CGTGGTTTGCCTCTCGTATCCCTTTCCCTCTGAGTTTAATCCTGCCGGGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224368.2 |
||
| CDS-3UTR CAA 90 bp | GGATTTTTATATACAGTACCATTGGCTTGTCCTGCCCACCCACCCACCCAGTTCATGTTCCCAATCGGTTaGATAGGAGATTTAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GFLYTVPLACPAHPPTQFMFPIG*IGDLGT Trigger: AGTGCCTAAATCTCCTATCAAACCGATTGGGAACAT...GAACTGGGTGGGTGGGTGGGCAGGACAAGCCAATGGTACTGTATATAAAAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CAA 90 bp | GTCCTGCCCACCCACCCACCCAGTTCGCTTAGCATTCACCTTTATTTAAAATGCGTGTTATCTATAATATaGATTTTCAAGGGCGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLPTHPPSSLSIHLYLKCVLSII*IFKGAP Trigger: TGGCGCGCCCTTGAAAATCAATATTATAGATAACAC...GCATTTTAAATAAAGGTGAATGCTAAGCGAACTGGGTGGGTGGGTGGGCAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CAA 90 bp | TATCCAGTTTCTCATTTGTCAGAATACATTCTTAACAGTGACCATCATTTCCACGGGCTTTGGCGGAGGTaGCCATCCATCTTCTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: YPVSHLSEYILNSDHHFHGLWRR*PSIFSI Trigger: AATTGAGAAGATGGATGGCAACCTCCGCCAAAGCCC...GTGGAAATGATGGTCACTGTTAAGAATGTATTCTGACAAATGAGAAACTGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTTCCTAAAATCGGCATCAGACTTCTTAAAAGAATAAGGTCTCAGCCAAAACAATGCTGTCTTCAGTaGTCAAAATTGGTACATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVPKIGIRLLKRIRSQPKQCCLQ*SKLVHH Trigger: GTGATGTACCAATTTTGACAACTGAAGACAGCATTG...TTTTGGCTGAGACCTTATTCTTTTAAGAAGTCTGATGCCGATTTTAGGAACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS CCA 72 bp | CATTTCTTGTCCAGCTGGGGAGACACCTCCAGGGCCTaGCCTAAAGTAGCTGTCCAGGATGTCATCACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HFLSSWGDTSRA*PKVAVQDVITE Trigger: TTCTGTGATGACATCCTGGACAGCTACTTTAGGCCAGGCCCTGGAGGTGTCTCCCCAGCTGGACAAGAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS CCA 72 bp | CTTCTGCAGGTTTGCATCTACCATTTCTTGTCCAGCTaGGGAGACACCTCCAGGGCCTGGCCTAAAGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLQVCIYHFLSS*GDTSRAWPKVA Trigger: AGCTACTTTAGGCCAGGCCCTGGAGGTGTCTCCCCAGCTGGACAAGAAATGGTAGATGCAAACCTGCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
||
| CDS GCA 72 bp | AGCTGTCCAGGATGTCATCACAGAAGCGGCACAGGTTaGAGAGCTGTTTCAGATGCTTCTGTAAGTGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: SCPGCHHRSGTG*RAVSDASVSEL Trigger: AAGTTCACTTACAGAAGCATCTGAAACAGCTCTGCAACCTGTGCCGCTTCTGTGATGACATCCTGGACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076169.4 |
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