Pregenerated sensors for MTUS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029651Ensembl transcript IDs: ENSMUST00000071878.12, ENSMUST00000085554.5, ENSMUST00000085558.11, ENSMUST00000110514.8, ENSMUST00000110515.9, ENSMUST00000146425.2, ENSMUST00000152105.8
Found 555 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTaGCCACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: LPSMRTVQLPSMRTR*PPAPGQHALRWAEA Trigger: GGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| 3UTR CCA 90 bp | CACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTaGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGG | + |
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Preference number: 1 (lower is better) Translates to: HCAATEHAHKVATGT*PARPQMGRSLSSYG Trigger: CCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| 3UTR CCA 90 bp | GACTCTGGCCGGAGAGGAGGGTCCAGAGGAGGAGCCTCTGTACACTaGAGATGTAGGGGAGAGTTTAATCGGGCTGGTTGGGTCCCCCGT | + |
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Preference number: 1 (lower is better) Translates to: DSGRRGGSRGGASVH*RCRGEFNRAGWVPR Trigger: ACGGGGGACCCAACCAGCCCGATTAAACTCTCCCCTACATCTCCAGTGTACAGAGGCTCCTCCTCTGGACCCTCCTCTCCGGCCAGAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
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| 3UTR CCA 90 bp | CCTCCTGACTCCATGAAGAACAGAGCTGTTTGGCAGGTCTGTCTGTaGCAGGAGGGGAGGGCGCAGTTCCCCAGCCTGGGAAGGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: PPDSMKNRAVWQVCL*QEGRAQFPSLGRET Trigger: TGTCTCCCTTCCCAGGCTGGGGAACTGCGCCCTCCCCTCCTGCCACAGACAGACCTGCCAAACAGCTCTGTTCTTCATGGAGTCAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR TCA 90 bp | ACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTaGTGTCATCTAGGTGTGGTACTGACTCTGGCCGGAGAGGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: TPSDGQKPELLWVAG*CHLGVVLTLAGEEG Trigger: ACCCTCCTCTCCGGCCAGAGTCAGTACCACACCTAGATGACATCACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
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| 3UTR CCA 90 bp | GTGGCTGATGGATGCCGGCTGGCCGTTTCACTGCGTTCCCTTGTCTaGGAGAGCCTTCTGGGGCTAAGATGGGACTACTACCAGGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: VADGCRLAVSLRSLV*ESLLGLRWDYYQVQ Trigger: CTGCACCTGGTAGTAGTCCCATCTTAGCCCCAGAAGGCTCTCCCAGACAAGGGAACGCAGTGAAACGGCCAGCCGGCATCCATCAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR GCA 90 bp | ACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGATaGATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGAGC | + |
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Preference number: 1 (lower is better) Translates to: TRMVLHKGQRGRCLR*IVQLPSMRTVQLPS Trigger: GCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| 3UTR CCA 90 bp | CCAGGTGCTGGTATGGAGCCAGCGCAATCTCTAGCTGCTCCTCCGTaGTTTTCCTTAGAGCTTCCTCAAAGCGCCGAGCTCTGTCACGCA | + |
|
Preference number: 1 (lower is better) Translates to: PGAGMEPAQSLAAPP*FSLELPQSAELCHA Trigger: TGCGTGACAGAGCTCGGCGCTTTGAGGAAGCTCTAAGGAAAACCACGGAGGAGCAGCTAGAGATTGCGCTGGCTCCATACCAGCACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR GCA 90 bp | AGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTaGCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: SANTRMVLHKGQRGR*LRCIVQLPSMRTVQ Trigger: CTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| 3UTR CCA 90 bp | GACAGACTCGGGTTTCCATGCCGAGAGGTCCGGATCATAGCAGCATaGAGGCAGAGGAATCATAGCAGCTCTGGCCACCTGGATCTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: DRLGFPCREVRIIAA*RQRNHSSSGHLDLR Trigger: TCTGAGATCCAGGTGGCCAGAGCTGCTATGATTCCTCTGCCTCCATGCTGCTATGATCCGGACCTCTCGGCATGGAAACCCGAGTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR TCA 90 bp | AGAGCTTCCTCAAAGCGCCGAGCTCTGTCACGCAGAGATTGGCTCTaGAAAGTTAGCGTGTCCACCTGGTCCTGTAATGTCAGCCGCAGC | + |
|
Preference number: 1 (lower is better) Translates to: RASSKRRALSRRDWL*KVSVSTWSCNVSRS Trigger: GCTGCGGCTGACATTACAGGACCAGGTGGACACGCTAACTTTTCAGAGCCAATCTCTGCGTGACAGAGCTCGGCGCTTTGAGGAAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR GCA 90 bp | TTCATCTCCAGCACCTGCTTCAGGCTCTGCATGTCTTCTTCCAGGTaGTGGTATGGAGCCAGCGCAATCTCTAGCTGCTCCTCCGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: FISSTCFRLCMSSSR*WYGASAISSCSSVV Trigger: AACCACGGAGGAGCAGCTAGAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGTGCTGGAGATGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR TCA 90 bp | ACTACTACCAGGTGCAGCCCTGGTGACCCTCCAGCAGAAGGGACATaGTCTAGCACCTTTAGAACTGGCTTCCCTCCTTTCCCCAAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: TTTRCSPGDPPAEGT*SSTFRTGFPPFPKR Trigger: TCTCTTGGGGAAAGGAGGGAAGCCAGTTCTAAAGGTGCTAGATCATGTCCCTTCTGCTGGAGGGTCACCAGGGCTGCACCTGGTAGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR TCA 90 bp | TGGTCTAATTTCTACCGTGTTAGAGTCAAAGGCCAGTCCAGTGGCTaGTGGATGCCGGCTGGCCGTTTCACTGCGTTCCCTTGTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: WSNFYRVRVKGQSSG*WMPAGRFTAFPCLG Trigger: TCCCAGACAAGGGAACGCAGTGAAACGGCCAGCCGGCATCCATCAGCCACTGGACTGGCCTTTGACTCTAACACGGTAGAAATTAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR GCA 90 bp | ATGTCTTCTTCCAGGTGCTGGTATGGAGCCAGCGCAATCTCTAGCTaGTCCTCCGTGGTTTTCCTTAGAGCTTCCTCAAAGCGCCGAGCT | + |
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Preference number: 1 (lower is better) Translates to: MSSSRCWYGASAISS*SSVVFLRASSKRRA Trigger: AGCTCGGCGCTTTGAGGAAGCTCTAAGGAAAACCACGGAGGAGCAGCTAGAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR GCA 90 bp | AGGTGGATCTGCTGGTTCTTCATCTCCAGCACCTGCTTCAGGCTCTaGATGTCTTCTTCCAGGTGCTGGTATGGAGCCAGCGCAATCTCT | + |
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Preference number: 1 (lower is better) Translates to: RWICWFFISSTCFRL*MSSSRCWYGASAIS Trigger: AGAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGTGCTGGAGATGAAGAACCAGCAGATCCACCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR GCA 90 bp | AGCCATGGTGGCCCTACCAGACTCCTCTGTCATGAAGATGAGCCATaGATGGTCTTGATCTTCTCCAAGTTCAGGCTCATCCTCGCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: SHGGPTRLLCHEDEP*MVLIFSKFRLILAA Trigger: TGCAGCGAGGATGAGCCTGAACTTGGAGAAGATCAAGACCATGCATGGCTCATCTTCATGACAGAGGAGTCTGGTAGGGCCACCATGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR CCA 90 bp | GGCTGGTTGGGTCCCCCGTTTGGAGCTTCCAAAGTAGTTCTTCGTTaGTTCGGCTCAGTCTCTTCTTTTCCTGGGTCTCTTTCTCCACGT | + |
|
Preference number: 1 (lower is better) Translates to: GWLGPPFGASKVVLR*FGSVSSFPGSLSPR Trigger: ACGTGGAGAAAGAGACCCAGGAAAAGAAGAGACTGAGCCGAACCAACGAAGAACTACTTTGGAAGCTCCAAACGGGGGACCCAACCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
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| 3UTR CCA 90 bp | GGAGATGTAGGGGAGAGTTTAATCGGGCTGGTTGGGTCCCCCGTTTaGAGCTTCCAAAGTAGTTCTTCGTTGGTTCGGCTCAGTCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: GDVGESLIGLVGSPV*SFQSSSSLVRLSLF Trigger: GAAGAGACTGAGCCGAACCAACGAAGAACTACTTTGGAAGCTCCAAACGGGGGACCCAACCAGCCCGATTAAACTCTCCCCTACATCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
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| 3UTR CCA 90 bp | TCGAACTCTGTATTGCTGAGTACCTGCCCTCAGCAGGTACAGCTGTaGAGGCGGGTCCTAACTTGGAGAGCTAAGTGGCCAACCAAACTT | + |
|
Preference number: 1 (lower is better) Translates to: SNSVLLSTCPQQVQL*RRVLTWRAKWPTKL Trigger: AAGTTTGGTTGGCCACTTAGCTCTCCAAGTTAGGACCCGCCTCCACAGCTGTACCTGCTGAGGGCAGGTACTCAGCAATACAGAGTTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR TCA 90 bp | TGGCCACCTGGATCTCAGAACTTAATTCAAGTGGGGTACCATATGTaGTGGGTGTCTGTGATGGAGAAACGAAGCCAGGGCCATGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: WPPGSQNLIQVGYHM*WVSVMEKRSQGHGE Trigger: CTCCCCATGGCCCTGGCTTCGTTTCTCCATCACAGACACCCATCACATATGGTACCCCACTTGAATTAAGTTCTGAGATCCAGGTGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR CCA 90 bp | GTGTATCCTTGGAGAAGCTGTCACCATGCCCAGGCCATTTCTGCTTaGCTCCATTGCTCTTGTCATCTTGGGCATGCTCAAAGACAGGCA | + |
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Preference number: 1 (lower is better) Translates to: VYPWRSCHHAQAISA*LHCSCHLGHAQRQA Trigger: TGCCTGTCTTTGAGCATGCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCTCCAAGGATACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR TCA 90 bp | GCCCTACCAGACTCCTCTGTCATGAAGATGAGCCATGCATGGTCTTaGTCTTCTCCAAGTTCAGGCTCATCCTCGCTGCAAAAGCCACAT | + |
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Preference number: 1 (lower is better) Translates to: ALPDSSVMKMSHAWS*SSPSSGSSSLQKPH Trigger: ATGTGGCTTTTGCAGCGAGGATGAGCCTGAACTTGGAGAAGATCAAGACCATGCATGGCTCATCTTCATGACAGAGGAGTCTGGTAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR TCA 90 bp | CGCCCAACTCAGAGCCATAGAAGGGATACAGACCACATTTGCCTCTaGGTCAGTTATGTGTATCCTTGGAGAAGCTGTCACCATGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: RPTQSHRRDTDHICL*VSYVYPWRSCHHAQ Trigger: CTGGGCATGGTGACAGCTTCTCCAAGGATACACATAACTGACTCAGAGGCAAATGTGGTCTGTATCCCTTCTATGGCTCTGAGTTGGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR GCA 90 bp | GCACCACATTCTATAATCACATCGAACTCTGTATTGCTGAGTACCTaGCCTCAGCAGGTACAGCTGTGGAGGCGGGTCCTAACTTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: APHSIITSNSVLLST*PQQVQLWRRVLTWR Trigger: TCTCCAAGTTAGGACCCGCCTCCACAGCTGTACCTGCTGAGGGCAGGTACTCAGCAATACAGAGTTCGATGTGATTATAGAATGTGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR CCA 90 bp | AAGACCTGTTTCTTCTCTGTGTATCTACCGTGTGTGTCTCCAGAATaGGCAAGACCCATGGAAGCTGGCTACAGTCAGATGCATCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: KTCFFSVYLPCVSPE*ARPMEAGYSQMHPR Trigger: CCTCGGATGCATCTGACTGTAGCCAGCTTCCATGGGTCTTGCCCATTCTGGAGACACACACGGTAGATACACAGAGAAGAAACAGGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR CCA 90 bp | CGGCTCAGTCTCTTCTTTTCCTGGGTCTCTTTCTCCACGTATTCCTaGAGGTTTGCATTTTCCTCCGACAGTTGTCTGGTGACAACTGTG | + |
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Preference number: 1 (lower is better) Translates to: RLSLFFSWVSFSTYS*RFAFSSDSCLVTTV Trigger: CACAGTTGTCACCAGACAACTGTCGGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAAAGAGACCCAGGAAAAGAAGAGACTGAGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
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| 3UTR GCA 90 bp | TTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATaGGGCGGTTGGTACAAGGAGGGTTTCGTGTATTCAAAACGGAGC | + |
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Preference number: 1 (lower is better) Translates to: FGIATVVYPHIWIYT*GGWYKEGFVYSKRS Trigger: GCTCCGTTTTGAATACACGAAACCCTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| 3UTR GCA 90 bp | TTATGTGTATCCTTGGAGAAGCTGTCACCATGCCCAGGCCATTTCTaGTTGGCTCCATTGCTCTTGTCATCTTGGGCATGCTCAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: LCVSLEKLSPCPGHF*LAPLLLSSWACSKT Trigger: TGTCTTTGAGCATGCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCTCCAAGGATACACATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR GCA 90 bp | ATATTCTTTTCCACCAGCTTTTCCAGCTCGATGATCTTCTTCTCCTaGAGGTGGATCTGCTGGTTCTTCATCTCCAGCACCTGCTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: IFFSTSFSSSMIFFS*RWICWFFISSTCFR Trigger: CCTGAAGCAGGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCAGGAGAAGAAGATCATCGAGCTGGAAAAGCTGGTGGAAAAGAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR GCA 90 bp | TCTCTTCTTTTCCTGGGTCTCTTTCTCCACGTATTCCTGGAGGTTTaGATTTTCCTCCGACAGTTGTCTGGTGACAACTGTGTTCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: SLLFLGLFLHVFLEV*IFLRQLSGDNCVLV Trigger: GACCAGAACACAGTTGTCACCAGACAACTGTCGGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAAAGAGACCCAGGAAAAGAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
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| 3UTR GCA 90 bp | GTGTGTGTGTGTGTAACTGACATGGCATGGGCTACTATTATGGAATaGCCAGCTCAGTATCCCAGTATCATGCAGAGCCAAAGGGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: VCVCVTDMAWATIME*PAQYPSIMQSQREK Trigger: CTTTTCCCTTTGGCTCTGCATGATACTGGGATACTGAGCTGGGCATTCCATAATAGTAGCCCATGCCATGTCAGTTACACACACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR GCA 90 bp | ACAACTGTGTTCTGGTCGATCCTCGCTTTGAGGTCTTCATTCTGCTaGTGCAGCACCTGGATCCTTTCTTCCAGGATGATATTCTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: TTVFWSILALRSSFC*CSTWILSSRMIFFS Trigger: GGAAAAGAATATCATCCTGGAAGAAAGGATCCAGGTGCTGCAGCAGCAGAATGAAGACCTCAAAGCGAGGATCGACCAGAACACAGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR GCA 90 bp | GTGACAACTGTGTTCTGGTCGATCCTCGCTTTGAGGTCTTCATTCTaGTGCTGCAGCACCTGGATCCTTTCTTCCAGGATGATATTCTTT | + |
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Preference number: 1 (lower is better) Translates to: VTTVFWSILALRSSF*CCSTWILSSRMIFF Trigger: AAAGAATATCATCCTGGAAGAAAGGATCCAGGTGCTGCAGCAGCAGAATGAAGACCTCAAAGCGAGGATCGACCAGAACACAGTTGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR TCA 90 bp | TCATCTTGGGCATGCTCAAAGACAGGCAGGCCCATGCTTAGAAAGTaGAGGGTCTCTTGTCATATACAGGAAACAAAGGTATCGTTATCG | + |
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Preference number: 1 (lower is better) Translates to: SSWACSKTGRPMLRK*RVSCHIQETKVSLS Trigger: CGATAACGATACCTTTGTTTCCTGTATATGACAAGAGACCCTTCACTTTCTAAGCATGGGCCTGCCTGTCTTTGAGCATGCCCAAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGGAGGGCGCAGTTCCCCAGCCTGGGAAGGGAGACAGACTCGGGTTTCCAGGTTTCTGGAAGCCTTaGCTGGAACCCCTGAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: GGEGAVPQPGKGDRLGFPGFWKP*LEPLSH Trigger: ATGGCTCAGGGGTTCCAGTCAAGGCTTCCAGAAACC...TGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTGGGGAACTGCGCCCTCCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGGTTGGGTCCCCCGTTTaGAGCTTCCAAAGTAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LCSYRACAQGGHRHLASTVGSPV*SFQSSS Trigger: AGAACTACTTTGGAAGCTCCAAACGGGGGACCCAAC...CGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTATGGGTGGCAGGGTGATGTCATCTAGGTGTGGTACTGACTCTGGCCGGCCTCGTGGCTGGCAGTaGTGTCTTCCACCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: APMGGRVMSSRCGTDSGRPRGWQ*CLPPAP Trigger: AGGAGCAGGTGGAAGACATCACTGCCAGCCACGAGG...CCGGCCAGAGTCAGTACCACACCTAGATGACATCACCCTGCCACCCATAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACGTGGACACCAGACTCTaGTGCTTACACCTTCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: RACALCSYRACAQGGHRHVDTRL*CLHLPK Trigger: CTTAGGAAGGTGTAAGCAGCAGAGTCTGGTGTCCAC...GTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| 3UTR-3UTR GCA 90 bp | CCTATGGGTGGCAGGGTGATGTCATCTAGGTGTGGTACTGACTCTGGCCGGAGAGCCTGGAACTGCTGCTaGAGCCGCTCCTGCAACTCC | + |
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Preference number: 2 (lower is better) Translates to: PMGGRVMSSRCGTDSGRRAWNCC*SRSCNS Trigger: GGAGTTGCAGGAGCGGCTGCAGCAGCAGTTCCAGGC...TCTCCGGCCAGAGTCAGTACCACACCTAGATGACATCACCCTGCCACCCATAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGTGGCAGGGTGATGTCATCTAGGTGTGGTACTGACTCTGGCCGGAGAGGATCTTCCACCTGCTCCTaGTGCTGGCAGCGCATGCGC | + |
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Preference number: 2 (lower is better) Translates to: MGGRVMSSRCGTDSGRRGSSTCS*CWQRMR Trigger: GCGCATGCGCTGCCAGCACCAGGAGCAGGTGGAAGA...TCCTCTCCGGCCAGAGTCAGTACCACACCTAGATGACATCACCCTGCCACCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAAGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAGATGGGCAGAAGCCTaGGCTCCTATGGGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PKRQYQDGLAQGSERTLPRWAEA*APMGGR Trigger: CCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCT...AGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| 3UTR-3UTR GCA 90 bp | AGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGATGCAGCTACCGAGCATaGGCACAAGGTGGCCACCGG | + |
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Preference number: 2 (lower is better) Translates to: SANTRMVLHKGQRGRCLRCSYRA*AQGGHR Trigger: CCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCA...TCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGGTCCCCCGTTTGGAGCTTCCAAAGTAGTTCTTCGTTGGTTCGGCTCAGTCTCCTGCACCTCCGCCTaGTGCTGCCAGCCCAACCTC | + |
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Preference number: 2 (lower is better) Translates to: LGPPFGASKVVLRWFGSVSCTSA*CCQPNL Trigger: GAGGTTGGGCTGGCAGCAGCAGGCGGAGGTGCAGGA...GACTGAGCCGAACCAACGAAGAACTACTTTGGAAGCTCCAAACGGGGGACCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGTTCTCCACGTATTCCTaGAGGTTTGCATTTTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LCSYRACAQGGHRHLASTFSTYS*RFAFSS Trigger: GGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAA...CGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| 3UTR-3UTR CCA 90 bp | TGGTATGGAGCCAGCGCAATCTCTAGCTGCTCCTCCGTGGTTTTCCTTAGAGCTACCTGCTCCTGGTGCTaGCAGCGCATGCGCAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: WYGASAISSCSSVVFLRATCSWC*QRMRSS Trigger: GCTGCTGCGCATGCGCTGCCAGCACCAGGAGCAGGT...AGCTCTAAGGAAAACCACGGAGGAGCAGCTAGAGATTGCGCTGGCTCCATACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGGTGGCAGGGTGATGTCATCTAGGTGTGGTACTGACTCTGGCCGGAGAGGAAGCAGGGCAGCCTCGTaGCTGGCAGTGATGTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: MGGRVMSSRCGTDSGRRGSRAAS*LAVMSS Trigger: GGAAGACATCACTGCCAGCCACGAGGCTGCCCTGCT...TCCTCTCCGGCCAGAGTCAGTACCACACCTAGATGACATCACCCTGCCACCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCTTCTTCTCCTGCAGGTGGATCTGCTGGTTCTTCATCTCCAGCACCTGCTTCCGCAGCAGCTGGTCCTaGTGCTCCGCCTGTAGACGC | + |
|
Preference number: 2 (lower is better) Translates to: IFFSCRWICWFFISSTCFRSSWS*CSACRR Trigger: GCGTCTACAGGCGGAGCATCAGGACCAGCTGCTGCG...GAAGCAGGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCAGGAGAAGAAGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGGTGGACACCAGACTCTaGTGCTTACACCTTCCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: IVQLPSMRTVQLPSMRTRVDTRL*CLHLPK Trigger: CTTAGGAAGGTGTAAGCAGCAGAGTCTGGTGTCCAC...CCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGGTGACAACTGTGTTCTaGTCGATCCTCGCTTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: IVQLPSMRTVQLPSMRTRVTTVF*SILALR Trigger: CCTCAAAGCGAGGATCGACCAGAACACAGTTGTCAC...CCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| 3UTR CAA 90 bp | GGGCTGGTTGGGTCCCCCGTTTGGAGCTTCCAAAGTAGTTCTTCGTaGGTTCGGCTCAGTCTCTTCTTTTCCTGGGTCTCTTTCTCCACG | + |
|
Preference number: 2 (lower is better) Translates to: GLVGSPVWSFQSSSS*VRLSLFFSWVSFST Trigger: CGTGGAGAAAGAGACCCAGGAAAAGAAGAGACTGAGCCGAACCAACGAAGAACTACTTTGGAAGCTCCAAACGGGGGACCCAACCAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
||
| 3UTR CAA 90 bp | TTGGAGAAGCTGTCACCATGCCCAGGCCATTTCTGCTTGGCTCCATaGCTCTTGTCATCTTGGGCATGCTCAAAGACAGGCAGGCCCATG | + |
|
Preference number: 2 (lower is better) Translates to: LEKLSPCPGHFCLAP*LLSSWACSKTGRPM Trigger: CATGGGCCTGCCTGTCTTTGAGCATGCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGGTGGATCTGCTGGTTCTTCATCTCCAGCACCTGCTTCAGGCTCTGCATGCCGACAGTTGTCTGGTaGCAACTGTGTTCTGGTCGA | + |
|
Preference number: 2 (lower is better) Translates to: CRWICWFFISSTCFRLCMPTVVW*QLCSGR Trigger: TCGACCAGAACACAGTTGTCACCAGACAACTGTCGG...CATGCAGAGCCTGAAGCAGGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR TCA 90 bp | TCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGTTAGATGGGCAGAAGCCTaGGCTCCTATGGGTGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SESPQLYTHTSGYTHAAVRWAEA*APMGGR Trigger: CCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCT...AACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGGGTGATGTCATCTAGGTGTGGTACTGACTCTGGCCGGAGAGGAGGGTCCGTATTCCTGGAGGTTTaGATTTTCCTCCGACAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: GRVMSSRCGTDSGRRGGSVFLEV*IFLRQL Trigger: CAACTGTCGGAGGAAAATGCAAACCTCCAGGAATAC...GGACCCTCCTCTCCGGCCAGAGTCAGTACCACACCTAGATGACATCACCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGTGGACACCAGACTCTaGTGCTTACACCTTCCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: ERTLPKMHCAATEHAHCAVDTRL*CLHLPK Trigger: CTTAGGAAGGTGTAAGCAGCAGAGTCTGGTGTCCAC...TGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR-3UTR CCA 90 bp | GACATCACAAGAATGCAGTCCCAGCCCAAGGCAACTGAGTTGCTGCAGGCCAGCTGTGTGTCTCCAGAATaGGCAAGACCCATGGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DITRMQSQPKATELLQASCVSPE*ARPMEA Trigger: AGCTTCCATGGGTCTTGCCCATTCTGGAGACACACA...GCTGGCCTGCAGCAACTCAGTTGCCTTGGGCTGGGACTGCATTCTTGTGATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR CAA 90 bp | GACTCTGCTGCTTACACCTTCCTAAGCGCCAATACCAGGATGGTCTaGCACAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: DSAAYTFLSANTRMV*HKGQRGRCLRCIVQ Trigger: CTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTTAGGAAGGTGTAAGCAGCAGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGTCGATCCTCGCTTTGAGGTCTTCATTCTGCTGCTGCAGCACCTGGATCCTTCGCAGAGATTGGCTCTaGAAAGTTAGCGTGTCCACC | + |
|
Preference number: 2 (lower is better) Translates to: WSILALRSSFCCCSTWILRRDWL*KVSVST Trigger: GGTGGACACGCTAACTTTTCAGAGCCAATCTCTGCG...AAGGATCCAGGTGCTGCAGCAGCAGAATGAAGACCTCAAAGCGAGGATCGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTCCCCCGTTTGGAGCTTCCAAAGTAGTTCTTCGTTGGTTCGGCTCAGTCTCTGGTCGATCCTCGCTTTaGGGTCTTCATTCTGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GPPFGASKVVLRWFGSVSGRSSL*GLHSAA Trigger: AGCAGCAGAATGAAGACCTCAAAGCGAGGATCGACC...AGAGACTGAGCCGAACCAACGAAGAACTACTTTGGAAGCTCCAAACGGGGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR CAA 90 bp | GGCCCTACCAGACTCCTCTGTCATGAAGATGAGCCATGCATGGTCTaGATCTTCTCCAAGTTCAGGCTCATCCTCGCTGCAAAAGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: GPTRLLCHEDEPCMV*IFSKFRLILAAKAT Trigger: TGTGGCTTTTGCAGCGAGGATGAGCCTGAACTTGGAGAAGATCAAGACCATGCATGGCTCATCTTCATGACAGAGGAGTCTGGTAGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR CAA 90 bp | TGTGTATCCTTGGAGAAGCTGTCACCATGCCCAGGCCATTTCTGCTaGGCTCCATTGCTCTTGTCATCTTGGGCATGCTCAAAGACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: CVSLEKLSPCPGHFC*APLLLSSWACSKTG Trigger: GCCTGTCTTTGAGCATGCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCTCCAAGGATACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR CAA 90 bp | TCCGACAGTTGTCTGGTGACAACTGTGTTCTGGTCGATCCTCGCTTaGAGGTCTTCATTCTGCTGCTGCAGCACCTGGATCCTTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SDSCLVTTVFWSILA*RSSFCCCSTWILSS Trigger: GGAAGAAAGGATCCAGGTGCTGCAGCAGCAGAATGAAGACCTCAAAGCGAGGATCGACCAGAACACAGTTGTCACCAGACAACTGTCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCCTTGACTGGAACCCCTGAGCCATCTTGTTGTGTGGTGATGGGGTCGAGTACTGACCTAAAGTTCTaGCATGGAAGTTCGTCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: EALTGTPEPSCCVVMGSSTDLKF*HGSSSL Trigger: GAGCGACGAACTTCCATGGCAGAACTTTAGGTCAGT...ACTCGACCCCATCACCACACAACAAGATGGCTCAGGGGTTCCAGTCAAGGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR GCA 90 bp | AGCTCGATGATCTTCTTCTCCTGCAGGTGGATCTGCTGGTTCTTCATCTCCAGCACCTGCTTCAGGCTCTaGATGTCTTCTTCCAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SSMIFFSCRWICWFFISSTCFRL*MSSSRC Trigger: GCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGT...GCTGGAGATGAAGAACCAGCAGATCCACCTGCAGGAGAAGAAGATCATCGAGCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGGCCAGCAGGACCTCCTGACTCCATGAAGAACAGAGCTGTTTGGCAGGTCAGTTATGTGTATCCTTaGAGAAGCTGTCACCATGCC | + |
|
Preference number: 2 (lower is better) Translates to: CRPAGPPDSMKNRAVWQVSYVYP*RSCHHA Trigger: GGCATGGTGACAGCTTCTCCAAGGATACACATAACT...GACCTGCCAAACAGCTCTGTTCTTCATGGAGTCAGGAGGTCCTGCTGGCCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGGTGGATCTGCTGGTTCTTCATCTCCAGCACCTGCTTCAGGCTCTGCATGGTGATGGCGACCGTATaGTTATTTTCCATCTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: CRWICWFFISSTCFRLCMVMATV*LFSISS Trigger: GCTGGAGATGGAAAATAACCATACGGTCGCCATCAC...CATGCAGAGCCTGAAGCAGGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCTGCAGGTGGATCTGCTGGTTCTTCATCTCCAGCACCTGCTTCAGGCTCTTTCTCCACGTATTCCTaGAGGTTTGCATTTTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SPAGGSAGSSSPAPASGSFSTYS*RFAFSS Trigger: GGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAA...AGAGCCTGAAGCAGGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCTTCTTCTCCTGCAGGTGGATCTGCTGGTTCTTCATCTCCAGCACCTGCTTCGTTGGGTCCCCCGTTTaGAGCTTCCAAAGTAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: IFFSCRWICWFFISSTCFVGSPV*SFQSSS Trigger: AGAACTACTTTGGAAGCTCCAAACGGGGGACCCAAC...GAAGCAGGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCAGGAGAAGAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR CAA 90 bp | AAGGGATACAGACCACATTTGCCTCTGAGTCAGTTATGTGTATCCTaGGAGAAGCTGTCACCATGCCCAGGCCATTTCTGCTTGGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KGYRPHLPLSQLCVS*EKLSPCPGHFCLAP Trigger: TGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCTCCAAGGATACACATAACTGACTCAGAGGCAAATGTGGTCTGTATCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR CCA 90 bp | AGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGAAGTCTCTTCTTTTCCTaGGTCTCTTTCTCCACGTAT | + |
|
Preference number: 2 (lower is better) Translates to: SANTRMVLHKGQRGRCLRSLFFS*VSFSTY Trigger: ATACGTGGAGAAAGAGACCCAGGAAAAGAAGAGACT...TCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTTTCCAGCTCGATGATCTTCTTCTCCTGCAGGTGGATCTGCTGGTTCTTCCTAGCTGCTCCTCCGTaGTTTTCCTTAGAGCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SFSSSMIFFSCRWICWFFLAAPP*FSLELP Trigger: AGGAAGCTCTAAGGAAAACCACGGAGGAGCAGCTAG...GAAGAACCAGCAGATCCACCTGCAGGAGAAGAAGATCATCGAGCTGGAAAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTATGGGTGGCAGGGTGATGTCATCTAGGTGTGGTACTGACTCTGGCCGGAGATTCTTCTCAAATTCATaGGTAGACATCAGTTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: PMGGRVMSSRCGTDSGRRFFSNS*VDISSW Trigger: CCAAGAACTGATGTCTACTCATGAATTTGAGAAGAA...TCTCCGGCCAGAGTCAGTACCACACCTAGATGACATCACCCTGCCACCCATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCCTGGGTCTCTTTCTCCACGTATTCCTGGAGGTTTGCATTTTCCTCCGACGTGACAACTGTGTTCTaGTCGATCCTCGCTTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FSWVSFSTYSWRFAFSSDVTTVF*SILALR Trigger: CCTCAAAGCGAGGATCGACCAGAACACAGTTGTCAC...GTCGGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAAAGAGACCCAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCACAGTTAACCGGAGGGGCAGGACAAAGAACACTGTGCCCCCTTCAGCTATACATTTCACCTCCTTaGGATAGGAGAAGTCATAAT | + |
|
Preference number: 2 (lower is better) Translates to: GAQLTGGAGQRTLCPLQLYISPP*DRRSHN Trigger: ATTATGACTTCTCCTATCCCAAGGAGGTGAAATGTA...TAGCTGAAGGGGGCACAGTGTTCTTTGTCCTGCCCCTCCGGTTAACTGTGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGTTGGTACAAGGAGACTGACCTAAAGTTCTaGCATGGAAGTTCGTCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: TVVYPHIWIYTCGGWYKETDLKF*HGSSSL Trigger: GAGCGACGAACTTCCATGGCAGAACTTTAGGTCAGT...CTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR-3UTR GCA 90 bp | CAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCACTGACCTAAAGTTCTaGCATGGAAGTTCGTCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: QFGIATVVYPHIWIYTCGTDLKF*HGSSSL Trigger: GAGCGACGAACTTCCATGGCAGAACTTTAGGTCAGT...GCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTTTCCTGGGTCTCTTTCTCCACGTATTCCTGGAGGTTTGCATTTTCCTCCTCTTCATTCTGCTGCTaGAGCACCTGGATCCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: FFSWVSFSTYSWRFAFSSSSFCC*STWILS Trigger: AGAAAGGATCCAGGTGCTGCAGCAGCAGAATGAAGA...GGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAAAGAGACCCAGGAAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCACTGACCTAAAGTTCTaGCATGGAAGTTCGTCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: MQFGIATVVYPHIWIYTCTDLKF*HGSSSL Trigger: GAGCGACGAACTTCCATGGCAGAACTTTAGGTCAGT...GCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAAAGGGAAAAGACCTGTTTCTTCTCTGTGTATCTACCGTGTGTGTCTCCAGACATGAAGATGAGCCATaGATGGTCTTGATCTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PKGKDLFLLCVSTVCVSRHEDEP*MVLIFS Trigger: GGAGAAGATCAAGACCATGCATGGCTCATCTTCATG...TCTGGAGACACACACGGTAGATACACAGAGAAGAAACAGGTCTTTTCCCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR TCA 72 bp | TCCTGGTGCTGGCAGCGCATGCGCAGCAGCTGGTCCTaGTGCTCCGCCTGTAGACGCGCGCTCTCGGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SWCWQRMRSSWS*CSACRRALSAW Trigger: CCAGGCCGAGAGCGCGCGTCTACAGGCGGAGCATCAGGACCAGCTGCTGCGCATGCGCTGCCAGCACCAGGA 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR CCA 72 bp | GCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTaGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ATEHAHKVATGT*PARPQMGRSLS Trigger: GCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR GCA 72 bp | AGGGCAGCCTCGTGGCTGGCAGTGATGTCTTCCACCTaGTCCTGGTGCTGGCAGCGCATGCGCAGCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RAASWLAVMSST*SWCWQRMRSSW Trigger: CCAGCTGCTGCGCATGCGCTGCCAGCACCAGGAGCAGGTGGAAGACATCACTGCCAGCCACGAGGCTGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR CCA 72 bp | ATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTaGCCACCGGCACCTGGCCAGCACGCCCTCAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: MRTVQLPSMRTR*PPAPGQHALRW Trigger: CCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR TCA 72 bp | GCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTaGGCTCCTATGGGTGGCAGGGTGATGTCATCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: APGQHALRWAEA*APMGGRVMSSR Trigger: CCTAGATGACATCACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| 3UTR TCA 72 bp | TTTCCATCTCCAGCAGGGCAGCCTCGTGGCTGGCAGTaGTGTCTTCCACCTGCTCCTGGTGCTGGCAGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: FPSPAGQPRGWQ*CLPPAPGAGSA Trigger: TGCGCTGCCAGCACCAGGAGCAGGTGGAAGACATCACTGCCAGCCACGAGGCTGCCCTGCTGGAGATGGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR CCA 72 bp | GGATGCCGGCTGGCCGTTTCACTGCGTTCCCTTGTCTaGGAGAGCCTTCTGGGGCTAAGATGGGACTACTAC | + |
|
Preference number: 3 (lower is better) Translates to: GCRLAVSLRSLV*ESLLGLRWDYY Trigger: GTAGTAGTCCCATCTTAGCCCCAGAAGGCTCTCCCAGACAAGGGAACGCAGTGAAACGGCCAGCCGGCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR CAA 90 bp | CTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGCGTATTCCTGGAGGTTaGCATTTTCCTCCGACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LPSMRTVQLPSMRTRWPPRIPGG*HFPPTV Trigger: AACTGTCGGAGGAAAATGCAAACCTCCAGGAATACG...CGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| 3UTR TCA 72 bp | GATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTaGTGTCATCTAGGTGTGGTACTGACTCTGGCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: DGQKPELLWVAG*CHLGVVLTLAG Trigger: TCCGGCCAGAGTCAGTACCACACCTAGATGACATCACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| 3UTR CCA 72 bp | GGGTTTCCATGCCGAGAGGTCCGGATCATAGCAGCATaGAGGCAGAGGAATCATAGCAGCTCTGGCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: GFPCREVRIIAA*RQRNHSSSGHL Trigger: CAGGTGGCCAGAGCTGCTATGATTCCTCTGCCTCCATGCTGCTATGATCCGGACCTCTCGGCATGGAAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR CAA 90 bp | CTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGTCGCTCAAGGACAATaGGAGTTGTTTCTCTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LPSMRTVQLPSMRTRWPPVAQGQ*ELFLFC Trigger: GCAAAAGAGAAACAACTCCAATTGTCCTTGAGCGAC...CGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR TCA 72 bp | CAAACTGAAAATGGGGGTGTTGCCTATGAGAGGCCGTaGTGGGAGCCATGGTGGCCCTACCAGACTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QTENGGVAYERP*WEPWWPYQTPL Trigger: CAGAGGAGTCTGGTAGGGCCACCATGGCTCCCATCACGGCCTCTCATAGGCAACACCCCCATTTTCAGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR TCA 72 bp | TTCTACCGTGTTAGAGTCAAAGGCCAGTCCAGTGGCTaGTGGATGCCGGCTGGCCGTTTCACTGCGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FYRVRVKGQSSG*WMPAGRFTAFP Trigger: AGGGAACGCAGTGAAACGGCCAGCCGGCATCCATCAGCCACTGGACTGGCCTTTGACTCTAACACGGTAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR TCA 72 bp | AGACATCACAAGAATGCAGTCCCAGCCCAAGGCAACTaGGTTGCTGCAGGCCAGCAGGACCTCCTGACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RHHKNAVPAQGN*VAAGQQDLLTP Trigger: TGGAGTCAGGAGGTCCTGCTGGCCTGCAGCAACTCAGTTGCCTTGGGCTGGGACTGCATTCTTGTGATGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR GCA 72 bp | GTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGATaGATTGTGCAGCTACCGAGCATGCGCACTGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLHKGQRGRCLR*IVQLPSMRTVQ Trigger: CTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR GCA 72 bp | ACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTaGCTAAGATGCATTGTGCAGCTACCGAGCATGCGC | + |
|
Preference number: 3 (lower is better) Translates to: TRMVLHKGQRGR*LRCIVQLPSMR Trigger: GCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR GCA 72 bp | TCACAAGAATGCAGTCCCAGCCCAAGGCAACTGAGTTaGTGCAGGCCAGCAGGACCTCCTGACTCCATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQECSPSPRQLS*CRPAGPPDSMK Trigger: CTTCATGGAGTCAGGAGGTCCTGCTGGCCTGCAGCAACTCAGTTGCCTTGGGCTGGGACTGCATTCTTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR GCA 72 bp | ACCTCCAGCCCCAAACCCATCCAGACATCACAAGAATaGAGTCCCAGCCCAAGGCAACTGAGTTGCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSSPKPIQTSQE*SPSPRQLSCCR Trigger: CCTGCAGCAACTCAGTTGCCTTGGGCTGGGACTGCATTCTTGTGATGTCTGGATGGGTTTGGGGCTGGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR CCA 72 bp | GTATTGCTGAGTACCTGCCCTCAGCAGGTACAGCTGTaGAGGCGGGTCCTAACTTGGAGAGCTAAGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLLSTCPQQVQL*RRVLTWRAKWP Trigger: TGGCCACTTAGCTCTCCAAGTTAGGACCCGCCTCCACAGCTGTACCTGCTGAGGGCAGGTACTCAGCAATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR CCA 72 bp | GTATGGTTATTTTCCATCTCCAGCAGGGCAGCCTCGTaGCTGGCAGTGATGTCTTCCACCTGCTCCTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VWLFSISSRAAS*LAVMSSTCSWC Trigger: GCACCAGGAGCAGGTGGAAGACATCACTGCCAGCCACGAGGCTGCCCTGCTGGAGATGGAAAATAACCATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR CCA 72 bp | GGTATGGAGCCAGCGCAATCTCTAGCTGCTCCTCCGTaGTTTTCCTTAGAGCTTCCTCAAAGCGCCGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GMEPAQSLAAPP*FSLELPQSAEL Trigger: GAGCTCGGCGCTTTGAGGAAGCTCTAAGGAAAACCACGGAGGAGCAGCTAGAGATTGCGCTGGCTCCATACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR CCA 72 bp | ACCTGCTTCAGGCTCTGCATGTCTTCTTCCAGGTGCTaGTATGGAGCCAGCGCAATCTCTAGCTGCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TCFRLCMSSSRC*YGASAISSCSS Trigger: GGAGGAGCAGCTAGAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTGGGAAGGGAGACAGACTCGGGTTTCCATGCCGAGAGGTCCGGATCATAGAGCCATGCATGGTCTaGATCTTCTCCAAGTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QPGKGDRLGFPCREVRIIEPCMV*IFSKFR Trigger: CCTGAACTTGGAGAAGATCAAGACCATGCATGGCTC...TATGATCCGGACCTCTCGGCATGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTGGGAAGGGAGACAGACTCGGGTTTCCATGCCGAGAGGTCCGGATCATATTCTGCTTGGCTCCATaGCTCTTGTCATCTTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QPGKGDRLGFPCREVRIIFCLAP*LLSSWA Trigger: TGCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAA...TATGATCCGGACCTCTCGGCATGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR CAA 90 bp | CCTATGGGTGGCAGGGTGATGTCATCTAGGTGTGGTACTGACTCTGGCCGGAGATGGTCGATCCTCGCTTaGAGGTCTTCATTCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PMGGRVMSSRCGTDSGRRWSILA*RSSFCC Trigger: GCAGCAGAATGAAGACCTCAAAGCGAGGATCGACCA...TCTCCGGCCAGAGTCAGTACCACACCTAGATGACATCACCCTGCCACCCATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR TCA 72 bp | AGGTGCAGCCCTGGTGACCCTCCAGCAGAAGGGACATaGTCTAGCACCTTTAGAACTGGCTTCCCTCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RCSPGDPPAEGT*SSTFRTGFPPF Trigger: GAAAGGAGGGAAGCCAGTTCTAAAGGTGCTAGATCATGTCCCTTCTGCTGGAGGGTCACCAGGGCTGCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR CCA 72 bp | GGGGAGAGTTTAATCGGGCTGGTTGGGTCCCCCGTTTaGAGCTTCCAAAGTAGTTCTTCGTTGGTTCGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GESLIGLVGSPV*SFQSSSSLVRL Trigger: GAGCCGAACCAACGAAGAACTACTTTGGAAGCTCCAAACGGGGGACCCAACCAGCCCGATTAAACTCTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
||
| 3UTR CCA 72 bp | CAGCTGTGGAGGCGGGTCCTAACTTGGAGAGCTAAGTaGCCAACCAAACTTATACCTGCAGGTTGTGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QLWRRVLTWRAK*PTKLIPAGCAC Trigger: GCAGGCACAACCTGCAGGTATAAGTTTGGTTGGCCACTTAGCTCTCCAAGTTAGGACCCGCCTCCACAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR GCA 72 bp | TCCTTGGAGAAGCTGTCACCATGCCCAGGCCATTTCTaGTTGGCTCCATTGCTCTTGTCATCTTGGGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: SLEKLSPCPGHF*LAPLLLSSWAC Trigger: GCATGCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCTCCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR GCA 72 bp | TCCAGGTGCTGGTATGGAGCCAGCGCAATCTCTAGCTaGTCCTCCGTGGTTTTCCTTAGAGCTTCCTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SRCWYGASAISS*SSVVFLRASSK Trigger: CTTTGAGGAAGCTCTAAGGAAAACCACGGAGGAGCAGCTAGAGATTGCGCTGGCTCCATACCAGCACCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR GCA 72 bp | TCCAGCTCGATGATCTTCTTCTCCTGCAGGTGGATCTaGTGGTTCTTCATCTCCAGCACCTGCTTCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSSMIFFSCRWI*WFFISSTCFRL Trigger: GAGCCTGAAGCAGGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCAGGAGAAGAAGATCATCGAGCTGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR CCA 72 bp | CCTCAGCAGGTACAGCTGTGGAGGCGGGTCCTAACTTaGAGAGCTAAGTGGCCAACCAAACTTATACCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PQQVQLWRRVLT*RAKWPTKLIPA Trigger: TGCAGGTATAAGTTTGGTTGGCCACTTAGCTCTCCAAGTTAGGACCCGCCTCCACAGCTGTACCTGCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGCTGTCACCATGCCCAGGCCATTTCTGCTTGGCTCCATTGCTCTTGTCATTGGTTTCTGGAAGCCTaGACTGGAACCCCTGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RSCHHAQAISAWLHCSCHWFLEA*TGTPEP Trigger: TGGCTCAGGGGTTCCAGTCAAGGCTTCCAGAAACCA...ATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR GCA 72 bp | TCCACCAGCTTTTCCAGCTCGATGATCTTCTTCTCCTaGAGGTGGATCTGCTGGTTCTTCATCTCCAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: STSFSSSMIFFS*RWICWFFISST Trigger: GGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCAGGAGAAGAAGATCATCGAGCTGGAAAAGCTGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR CCA 72 bp | GGCCATTTCTGCTTGGCTCCATTGCTCTTGTCATCTTaGGCATGCTCAAAGACAGGCAGGCCCATGCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GHFCLAPLLLSS*ACSKTGRPMLR Trigger: TCTAAGCATGGGCCTGCCTGTCTTTGAGCATGCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGTCCCCCGTTTGGAGCTTCCAAAGTAGTTCTTCGTTGGTTCGGCTCAGTCCAAAGTAGTTCTTCGTaGGTTCGGCTCAGTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LGPPFGASKVVLRWFGSVQSSSS*VRLSLF Trigger: GAAGAGACTGAGCCGAACCAACGAAGAACTACTTTG...GACTGAGCCGAACCAACGAAGAACTACTTTGGAAGCTCCAAACGGGGGACCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCAGCTAATCCCAGAGTACCTGACCTCCAGCCCCAAACCCATCCAGACATCGTCGCTCAAGGACAATaGGAGTTGTTTCTCTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PSANPRVPDLQPQTHPDIVAQGQ*ELFLFC Trigger: GCAAAAGAGAAACAACTCCAATTGTCCTTGAGCGAC...GATGTCTGGATGGGTTTGGGGCTGGAGGTCAGGTACTCTGGGATTAGCTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTGGGAAGGGAGACAGACTCGGGTTTCCATGCCGAGAGGTCCGGATCATAAAAACTACTTCTCCTTaGTGGATCATGCCTCTAATC | + |
|
Preference number: 3 (lower is better) Translates to: QPGKGDRLGFPCREVRIIKTTSP*WIMPLI Trigger: GATTAGAGGCATGATCCACAAAGGAGAAGTAGTTTT...TATGATCCGGACCTCTCGGCATGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR TCA 72 bp | CATGGGGAGATTTATTCAAGTGCCCAGGGTCGAGGCTaGTTAGGGCAAAGCTCTAGTCCACCTAATGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: HGEIYSSAQGRG*LGQSSSPPNEG Trigger: ACCCTCATTAGGTGGACTAGAGCTTTGCCCTAATCAGCCTCGACCCTGGGCACTTGAATAAATCTCCCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR GCA 72 bp | GGTCTTGATCTTCTCCAAGTTCAGGCTCATCCTCGCTaGAAAAGCCACATGCTCCCATGTTTTCCTGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GLDLLQVQAHPR*KSHMLPCFPED Trigger: GTCCTCAGGAAAACATGGGAGCATGTGGCTTTTGCAGCGAGGATGAGCCTGAACTTGGAGAAGATCAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR TCA 72 bp | GACTCCTCTGTCATGAAGATGAGCCATGCATGGTCTTaGTCTTCTCCAAGTTCAGGCTCATCCTCGCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: DSSVMKMSHAWS*SSPSSGSSSLQ Trigger: TTGCAGCGAGGATGAGCCTGAACTTGGAGAAGATCAAGACCATGCATGGCTCATCTTCATGACAGAGGAGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR GCA 72 bp | AGTCAGTTATGTGTATCCTTGGAGAAGCTGTCACCATaGCCAGGCCATTTCTGCTTGGCTCCATTGCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SQLCVSLEKLSP*PGHFCLAPLLL Trigger: CAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCTCCAAGGATACACATAACTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR GCA 72 bp | TGGTCGATCCTCGCTTTGAGGTCTTCATTCTGCTGCTaGAGCACCTGGATCCTTTCTTCCAGGATGATATTC | + |
|
Preference number: 3 (lower is better) Translates to: WSILALRSSFCC*STWILSSRMIF Trigger: GAATATCATCCTGGAAGAAAGGATCCAGGTGCTGCAGCAGCAGAATGAAGACCTCAAAGCGAGGATCGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR CCA 72 bp | CAATTCGGAATCGCCACAGTTGTATACCCACACATCTaGATATACACATGCGGCGGTTGGTACAAGGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: QFGIATVVYPHI*IYTCGGWYKEG Trigger: ACCCTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR CCA 72 bp | TTCTTCTCTGTGTATCTACCGTGTGTGTCTCCAGAATaGGCAAGACCCATGGAAGCTGGCTACAGTCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: FFSVYLPCVSPE*ARPMEAGYSQM Trigger: CATCTGACTGTAGCCAGCTTCCATGGGTCTTGCCCATTCTGGAGACACACACGGTAGATACACAGAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGGTTTGCATTTTCCTCCGACAGTTGTCTGGTGACAACTGTGTTCTGGTCCAAAGTAGTTCTTCGTaGGTTCGGCTCAGTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LEVCIFLRQLSGDNCVLVQSSSS*VRLSLF Trigger: GAAGAGACTGAGCCGAACCAACGAAGAACTACTTTG...GACCAGAACACAGTTGTCACCAGACAACTGTCGGAGGAAAATGCAAACCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCGATCCTCGCTTTGAGGTCTTCATTCTGCTGCTGCAGCACCTGGATCCTTAGTAGACATCAGTTCTaGGACTTTGTGATCATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: WSILALRSSFCCCSTWILSRHQF*DFVIMV Trigger: GACCATGATCACAAAGTCCAAGAACTGATGTCTACT...AAGGATCCAGGTGCTGCAGCAGCAGAATGAAGACCTCAAAGCGAGGATCGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| 3UTR TCA 72 bp | GGATCTCAGAACTTAATTCAAGTGGGGTACCATATGTaGTGGGTGTCTGTGATGGAGAAACGAAGCCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GSQNLIQVGYHM*WVSVMEKRSQG Trigger: GCCCTGGCTTCGTTTCTCCATCACAGACACCCATCACATATGGTACCCCACTTGAATTAAGTTCTGAGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR GCA 72 bp | TTCCTGGGTCTCTTTCTCCACGTATTCCTGGAGGTTTaGATTTTCCTCCGACAGTTGTCTGGTGACAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: FLGLFLHVFLEV*IFLRQLSGDNC Trigger: ACAGTTGTCACCAGACAACTGTCGGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAAAGAGACCCAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071878.12 ENSMUST00000146425.2 |
||
| 3UTR GCA 72 bp | TGTCATCTTGGGCATGCTCAAAGACAGGCAGGCCCATaGTTAGAAAGTGAAGGGTCTCTTGTCATATACAGG | + |
|
Preference number: 3 (lower is better) Translates to: CHLGHAQRQAGP*LESEGSLVIYR Trigger: CCTGTATATGACAAGAGACCCTTCACTTTCTAAGCATGGGCCTGCCTGTCTTTGAGCATGCCCAAGATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR TCA 72 bp | CAGAGCCATAGAAGGGATACAGACCACATTTGCCTCTaGGTCAGTTATGTGTATCCTTGGAGAAGCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QSHRRDTDHICL*VSYVYPWRSCH Trigger: GTGACAGCTTCTCCAAGGATACACATAACTGACTCAGAGGCAAATGTGGTCTGTATCCCTTCTATGGCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR TCA 72 bp | GCATGCTCAAAGACAGGCAGGCCCATGCTTAGAAAGTaGAGGGTCTCTTGTCATATACAGGAAACAAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ACSKTGRPMLRK*RVSCHIQETKV Trigger: TACCTTTGTTTCCTGTATATGACAAGAGACCCTTCACTTTCTAAGCATGGGCCTGCCTGTCTTTGAGCATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR GCA 72 bp | TTCAAAACGGAGCTGTTTGTGACTGACCTAAAGTTCTaGCATGGAAGTTCGTCGCTCAAGGACAATTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FKTELFVTDLKF*HGSSSLKDNWS Trigger: ACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAACTTTAGGTCAGTCACAAACAGCTCCGTTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR TCA 72 bp | ATACAGGAAACAAAGGTATCGTTATCGGCACTGTGTTaGCTGTTAAAACTACTTCTCCTTTGTGGATCATGC | + |
|
Preference number: 3 (lower is better) Translates to: IQETKVSLSALC*LLKLLLLCGSC Trigger: GCATGATCCACAAAGGAGAAGTAGTTTTAACAGTCAACACAGTGCCGATAACGATACCTTTGTTTCCTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR GCA 72 bp | CATTGCTACCACTTTGACCACAACAGCCTAACATACTaGACCACATTCTATAATCACATCGAACTCTGTATT | + |
|
Preference number: 3 (lower is better) Translates to: HCYHFDHNSLTY*TTFYNHIELCI Trigger: AATACAGAGTTCGATGTGATTATAGAATGTGGTGCAGTATGTTAGGCTGTTGTGGTCAAAGTGGTAGCAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR CCA 72 bp | AAGTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTaGAGTTGTTTCTCTTTTGCTTCTCACTATACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: KFCHGSSSLKDN*SCFSFASHYTK Trigger: TTTAGTATAGTGAGAAGCAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | TGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCCCTGCCCACCATCCGTaGGGGGCGAGGCCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CALCSYRACAQGGHRHLAPAHHP*GARPLR Trigger: CCTCAGTGGCCTCGCCCCCCACGGATGGTGGGCAGG...GGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | GGCCACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATCCGCTCCTCCCCACTaGCCTCGGAGGGCACGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHRHLASTPSDGQKPELLSAPPH*PRRARS Trigger: AGAGCGTGCCCTCCGAGGTCAGTGGGGAGGAGCGGA...TAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | GCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGCCCTTGCTGCAGCCGCTCCTaGAACTCCTGCACCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AATEHAHKVATGTWPARPCCSRS*NSCTSA Trigger: GGCGGAGGTGCAGGAGTTGCAGGAGCGGCTGCAGCA...AGGGCGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | GGTGGCCACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCGCCTGGAACTGCTGCTaGAGCCGCTCCTGCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGHRHLASTPSDGQKPELAWNCC*SRSCNS Trigger: GGAGTTGCAGGAGCGGCTGCAGCAGCAGTTCCAGGC...GAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCCACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGTCCACCTGCTCCTGGTaGTGGCAGCGCATGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSYRACAQGGHRHLASTSTCSW*WQRMRS Trigger: GCTGCGCATGCGCTGCCAGCACCAGGAGCAGGTGGA...CGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | GCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCATCCACCTGCTCCTGGTaGTGGCAGCGCATGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHCAATEHAHKVATGTWPSTCSW*WQRMRS Trigger: GCTGCGCATGCGCTGCCAGCACCAGGAGCAGGTGGA...TGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | TGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCTCCACCTGCTCCTGGTaGTGGCAGCGCATGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CALCSYRACAQGGHRHLASTCSW*WQRMRS Trigger: GCTGCGCATGCGCTGCCAGCACCAGGAGCAGGTGGA...GGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGCCCTGGTATCCAGCTGCACTaGCTGCAGGTCCGTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AATEHAHKVATGTWPARPGIQLH*LQVRGR Trigger: CCTCCCACGGACCTGCAGCCAGTGCAGCTGGATACC...AGGGCGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGGCTGGTGTCCTTTGTaGCCCCTCCCCACGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVQLPSMRTRWPPAPGQHGWCPL*PLPTRR Trigger: CCTGCGCGTGGGGAGGGGCCACAAAGGACACCAGCC...GTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | GCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGCCCTCCAGACCCAGCTGCCTaGCCTGCCACTCACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AATEHAHKVATGTWPARPPDPAA*PATHTC Trigger: ACAGGTGTGAGTGGCAGGCCAGGCAGCTGGGTCTGG...AGGGCGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | CGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCGCAGCAGCTGGTCCTaGTGCTCCGCCTGTAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: RACALCSYRACAQGGHRHRSSWS*CSACRR Trigger: GCGTCTACAGGCGGAGCATCAGGACCAGCTGCTGCG...GTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | GCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGTAGGGGTGGCTTGCTaGGACCCCTCCACACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHCAATEHAHKVATGTWPVGVAC*DPSTPA Trigger: TGCTGGTGTGGAGGGGTCTCAGCAAGCCACCCCTAC...TGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | CTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGCCCCACGGGGACCAGTaGAGCATCTCCCTGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCSYRACAQGGHRHLASTPHGDQ*SISLTQ Trigger: CTGAGTCAGGGAGATGCTTCACTGGTCCCCGTGGGG...CGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | CGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACTCCTGCACCTCCGCCTaGTGCTGCCAGCCCAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RACALCSYRACAQGGHRHSCTSA*CCQPNL Trigger: GAGGTTGGGCTGGCAGCAGCAGGCGGAGGTGCAGGA...GTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACTCCTGCACCTCCGCCTaGTGCTGCCAGCCCAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVQLPSMRTRWPPAPGQHSCTSA*CCQPNL Trigger: GAGGTTGGGCTGGCAGCAGCAGGCGGAGGTGCAGGA...GTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | ACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGCTGCAGCCGCTCCTaGAACTCCTGCACCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGTWPARPQMGRSLSSYGCCSRS*NSCTSA Trigger: GGCGGAGGTGCAGGAGTTGCAGGAGCGGCTGCAGCA...CCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | GAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTCCACCTGCTCCTGGTaGTGGCAGCGCATGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EHAHCAATEHAHKVATGTSTCSW*WQRMRS Trigger: GCTGCGCATGCGCTGCCAGCACCAGGAGCAGGTGGA...GGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | CACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGACCTGCTCCTGGTGCTaGCAGCGCATGCGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRHLASTPSDGQKPELLWTCSWC*QRMRSS Trigger: GCTGCTGCGCATGCGCTGCCAGCACCAGGAGCAGGT...CCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGCCACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCGTTCACAGTTGTCTCTaGGTGGAGGAGGGGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGHRHLASTPSDGQKPELVHSCL*VEEGRW Trigger: CCAGCGCCCCTCCTCCACCCAGAGACAACTGTGAAC...GAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | CACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCACGCAGCAGCTGGTCCTaGTGCTCCGCCTGTAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: HLASTPSDGQKPELLWVARSSWS*CSACRR Trigger: GCGTCTACAGGCGGAGCATCAGGACCAGCTGCTGCG...TGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGGTGATGTCTTCCACCTaGTCCTGGTGCTGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSYRACAQGGHRHLASTVMSST*SWCWQR Trigger: GCGCTGCCAGCACCAGGAGCAGGTGGAAGACATCAC...CGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAG 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | GCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGTGATGTCTTCCACCTaGTCCTGGTGCTGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AHCAATEHAHKVATGTWPVMSST*SWCWQR Trigger: GCGCTGCCAGCACCAGGAGCAGGTGGAAGACATCAC...TGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGGCCAGTCCAGTGGCTGATGGATGCCGGCTGGCCGTTTCACTGCGTTCCCCCGTGGGAGGGACGCTaGCAGCTGCAGCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRPVQWLMDAGWPFHCVPPWEGR*QLQLSS Trigger: GCTGCTCAGCTGCAGCTGGCAGCGTCCCTCCCACGG...GGGAACGCAGTGAAACGGCCAGCCGGCATCCATCAGCCACTGGACTGGCCTTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR GCA 90 bp | GCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGCCCTCTTCCCAGGGTGGTCTaGGACCTCCTGCAGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: AATEHAHKVATGTWPARPLPRVV*DLLQEL Trigger: AAGTTCCTGCAGGAGGTCGCAGACCACCCTGGGAAG...AGGGCGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | ATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCCTCGTGGCTGGCAGTaGTGTCTTCCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MRTVQLPSMRTRWPPAPGPRGWQ*CLPPAP Trigger: AGGAGCAGGTGGAAGACATCACTGCCAGCCACGAGG...GCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCAGTGATGTCTTCCACCTaGTCCTGGTGCTGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HCAATEHAHKVATGTWPAVMSST*SWCWQR Trigger: GCGCTGCCAGCACCAGGAGCAGGTGGAAGACATCAC...TGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGGGAAGGGAGACAGACTCGGGTTTCCATGCCGAGAGGTCCGGATCATACGCGCGCTCTCGGCCTaGAACTGCTGCTGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QPGKGDRLGFPCREVRIIRALSA*NCCCSR Trigger: GCGGCTGCAGCAGCAGTTCCAGGCCGAGAGCGCGCG...TATGATCCGGACCTCTCGGCATGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CCA 90 bp | ACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTTCTCCCGAGCTTCCTaGGAGGAGGGCGTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGTWPARPQMGRSLSSYGFSRAS*EEGVSL Trigger: CAAGGACACGCCCTCCTCCCAGGAAGCTCGGGAGAA...CCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CCA 90 bp | ACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACACGCTGTCCAGGGATTaGCTGCTGGGCACTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVQLPSMRTRWPPAPGQHTLSRD*LLGTAE Trigger: CTCTGCAGTGCCCAGCAGCCAATCCCTGGACAGCGT...GTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | GCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGCCCTCCTGCAGGTCAGGCTTaGGTGGGAACTCATTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AATEHAHKVATGTWPARPPAGQA*VGTHFE Trigger: CTCGAAATGAGTTCCCACCCAAGCCTGACCTGCAGG...AGGGCGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | TGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTCCTCGTGGCTGGCAGTaGTGTCTTCCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WPARPQMGRSLSSYGWQGPRGWQ*CLPPAP Trigger: AGGAGCAGGTGGAAGACATCACTGCCAGCCACGAGG...ACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTGATGGTGCTGGCAGCGCATaGGCAGCAGCTGGTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PARPQMGRSLSSYGWQGDGAGSA*AAAGPD Trigger: ATCAGGACCAGCTGCTGCGCATGCGCTGCCAGCACC...ATCACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGTGATGTCTTCCACCTaGTCCTGGTGCTGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HLASTPSDGQKPELLWVAVMSST*SWCWQR Trigger: GCGCTGCCAGCACCAGGAGCAGGTGGAAGACATCAC...TGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCACCCAAGGTATCCAGCTaGACTGGCTGCAGGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLASTPSDGQKPELLWVAPKVSS*TGCRSV Trigger: CACGGACCTGCAGCCAGTGCAGCTGGATACCTTGGG...TGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | ACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCCGCGCGCTCTCGGCCTaGAACTGCTGCTGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLPKMHCAATEHAHCAATRALSA*NCCCSR Trigger: GCGGCTGCAGCAGCAGTTCCAGGCCGAGAGCGCGCG...GGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTAGCAGGGCAGCCTCGTaGCTGGCAGTGATGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WPARPQMGRSLSSYGWQGSRAAS*LAVMSS Trigger: GGAAGACATCACTGCCAGCCACGAGGCTGCCCTGCT...ACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | GCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCCTGAGGCCAACAATTTaGTACTGCCCGAGTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ALCSYRACAQGGHRHLASLRPTI*YCPSSR Trigger: GCGGGAACTCGGGCAGTACCAAATTGTTGGCCTCAG...GCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | TACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGGCTTGGGGATCCCACTaGAGCAGGTGGTCCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRACALCSYRACAQGGHRAWGSH*SRWSCQ Trigger: CTGACAGGACCACCTGCTCCAGTGGGATCCCCAAGC...CCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | TGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCGGTCGATCCTCGCTTTaGGGTCTTCATTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CALCSYRACAQGGHRHLAGRSSL*GLHSAA Trigger: AGCAGCAGAATGAAGACCTCAAAGCGAGGATCGACC...GGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGTGCTGCAGCCGCTCCTaGAACTCCTGCACCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RCLRCIVQLPSMRTVQLPCCSRS*NSCTSA Trigger: GGCGGAGGTGCAGGAGTTGCAGGAGCGGCTGCAGCA...CGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | GGCCACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTAATGTCTTCTTCCAGGTaGTGGTATGGAGCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHRHLASTPSDGQKPELLMSSSR*WYGASA Trigger: TGCGCTGGCTCCATACCAGCACCTGGAAGAAGACAT...TAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTTTGGCTGCTGGGCACTaGAGAGATGCTGGAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WPARPQMGRSLSSYGWQGLAAGH*RDAGAP Trigger: AGGAGCTCCAGCATCTCTGCAGTGCCCAGCAGCCAA...ACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | AGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGACGCGCGCTCTCGGCCTaGAACTGCTGCTGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SANTRMVLHKGQRGRCLRRALSA*NCCCSR Trigger: GCGGCTGCAGCAGCAGTTCCAGGCCGAGAGCGCGCG...TCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | GCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCTGCAGGTGGATCTGCTaGTTCTTCATCTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ALCSYRACAQGGHRHLASCRWIC*FFISST Trigger: GGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCA...GCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACCGGAAGCCTCTGGACTaGCTTGACCTACTGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVQLPSMRTRWPPAPGQHRKPLD*LDLLHS Trigger: GGAATGCAGTAGGTCAAGCCAGTCCAGAGGCTTCCG...GTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | AGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTTGGTGTCTGATGGGCTaGACCCCTTGGCTTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMRTVQLPSMRTRWPPAPWCLMG*TPWLLR Trigger: CCTCAGAAGCCAAGGGGTCCAGCCCATCAGACACCA...AGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CCA 90 bp | ACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTCCCACTGGAGCAGGTaGTCCTGTCAGGCACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGTWPARPQMGRSLSSYGSHWSR*SCQALL Trigger: CAAAAGTGCCTGACAGGACCACCTGCTCCAGTGGGA...CCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CCA 90 bp | CACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGAGAAGGGAAGACCCGTaGCTTCTGCAAGTCGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRHLASTPSDGQKPELLWRREDP*LLQVGL Trigger: AAGCCCGACTTGCAGAAGCCACGGGTCTTCCCTTCT...CCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR TCA 90 bp | GAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCACGCAGCAGCTGGTCCTaGTGCTCCGCCTGTAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: ERTLPKMHCAATEHAHCARSSWS*CSACRR Trigger: GCGTCTACAGGCGGAGCATCAGGACCAGCTGCTGCG...TGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | GGCCACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTAGCTTTTCCAGCTCGATaGTCTTCTTCTCCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHRHLASTPSDGQKPELLAFPAR*SSSPAG Trigger: ACCTGCAGGAGAAGAAGATCATCGAGCTGGAAAAGC...TAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR TCA 90 bp | GGAGCACAGTTAACCGGAGGGGCAGGACAAAGAACACTGTGCCCCCTTCAGCTACAAAGGTTGAGCGGGTaGCCGGCCTGCTCTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GAQLTGGAGQRTLCPLQLQRLSG*PACSAP Trigger: CGGAGCAGAGCAGGCCGGTCACCCGCTCAACCTTTG...TAGCTGAAGGGGGCACAGTGTTCTTTGTCCTGCCCCTCCGGTTAACTGTGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR TCA 90 bp | ACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGGTCGATCCTCGCTTTaGGGTCTTCATTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVQLPSMRTRWPPAPGQHGRSSL*GLHSAA Trigger: AGCAGCAGAATGAAGACCTCAAAGCGAGGATCGACC...GTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGGGAGGGCGCAGTTCCCCAGCCTGGGAAGGGAGACAGACTCGGGTTTCCACCGACAGTTGTCTGGTaGCAACTGTGTTCTGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GGEGAVPQPGKGDRLGFPPTVVW*QLCSGR Trigger: TCGACCAGAACACAGTTGTCACCAGACAACTGTCGG...TGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTGGGGAACTGCGCCCTCCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR TCA 90 bp | CGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCCGACAGTTGTCTGGTaGCAACTGTGTTCTGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RACALCSYRACAQGGHRHPTVVW*QLCSGR Trigger: TCGACCAGAACACAGTTGTCACCAGACAACTGTCGG...GTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | ATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCGTCTCCTTCTCCTTCTaGAGCTTCTCACACTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MRTVQLPSMRTRWPPAPGVSFSF*SFSHLA Trigger: CGCCAAGTGTGAGAAGCTGCAGAAGGAGAAGGAGAC...GCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | GAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAACCTCCGCCTGCTGCTaGCAGCCCAACCTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERTLPKMHCAATEHAHCATSACC*QPNLLS Trigger: GCTGAGGAGGTTGGGCTGGCAGCAGCAGGCGGAGGT...TGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | GGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTACCTCCGCCTGCTGCTaGCAGCCCAACCTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQRGRCLRCIVQLPSMRTTSACC*QPNLLS Trigger: GCTGAGGAGGTTGGGCTGGCAGCAGCAGGCGGAGGT...AGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | ACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCTCCTGCACCTCCGCCTaGTGCTGCCAGCCCAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLPKMHCAATEHAHCAATSCTSA*CCQPNL Trigger: GAGGTTGGGCTGGCAGCAGCAGGCGGAGGTGCAGGA...GGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | ACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACACCTGCTTCAGGCTCTaGATGTCTTCTTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVQLPSMRTRWPPAPGQHTCFRL*MSSSRC Trigger: GCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGT...GTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | GCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGATGCTGTTTCCCTTaGCATCCTACCTACACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATEHAHCAATEHAHKVATGCCFP*HPTYTG Trigger: GCCGGTGTAGGTAGGATGGCAAGGGAAACAGCATCC...GGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR GCA 90 bp | CGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACAAGACCCGTGGCTTCTaGAAGTCGGGCTTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RACALCSYRACAQGGHRHKTRGF*KSGFSF Trigger: GAAACTGAAGCCCGACTTGCAGAAGCCACGGGTCTT...GTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CCA 90 bp | TGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCGTTGGGTCCCCCGTTTaGAGCTTCCAAAGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CALCSYRACAQGGHRHLAVGSPV*SFQSSS Trigger: AGAACTACTTTGGAAGCTCCAAACGGGGGACCCAAC...GGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR CCA 90 bp | ACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACTTTAATCGGGCTGGTTaGGTCCCCCGTTTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVQLPSMRTRWPPAPGQHFNRAG*VPRLEL Trigger: AAGCTCCAAACGGGGGACCCAACCAGCCCGATTAAA...GTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR TCA 90 bp | AGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGACGCAGCAGCTGGTCCTaGTGCTCCGCCTGTAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: SANTRMVLHKGQRGRCLRRSSWS*CSACRR Trigger: GCGTCTACAGGCGGAGCATCAGGACCAGCTGCTGCG...TCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR TCA 90 bp | TTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTCCTCGTGGCTGGCAGTaGTGTCTTCCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCSYRACALCSYRACAQGPRGWQ*CLPPAP Trigger: AGGAGCAGGTGGAAGACATCACTGCCAGCCACGAGG...ACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR TCA 90 bp | ACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTCGATCCTCGCTTTaGGGTCTTCATTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWPARPQMGRSLSSYGWQGRSSL*GLHSAA Trigger: AGCAGCAGAATGAAGACCTCAAAGCGAGGATCGACC...CTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR TCA 90 bp | AGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGTCGATCCTCGCTTTaGGGTCTTCATTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SMRTVQLPSMRTRWPPAPGRSSL*GLHSAA Trigger: AGCAGCAGAATGAAGACCTCAAAGCGAGGATCGACC...AGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | TGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTGTCTCCTTCTCCTTCTaGAGCTTCTCACACTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WPARPQMGRSLSSYGWQGVSFSF*SFSHLA Trigger: CGCCAAGTGTGAGAAGCTGCAGAAGGAGAAGGAGAC...ACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | TGCAGGCCAGCAGGACCTCCTGACTCCATGAAGAACAGAGCTGTTTGGCAGGTCGCCTGGAACTGCTGCTaGAGCCGCTCCTGCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRPAGPPDSMKNRAVWQVAWNCC*SRSCNS Trigger: GGAGTTGCAGGAGCGGCTGCAGCAGCAGTTCCAGGC...GACCTGCCAAACAGCTCTGTTCTTCATGGAGTCAGGAGGTCCTGCTGGCCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR GCA 90 bp | CACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAATGTCTTCTTCCAGGTaGTGGTATGGAGCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLASTPSDGQKPELLWVAMSSSR*WYGASA Trigger: TGCGCTGGCTCCATACCAGCACCTGGAAGAAGACAT...TGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | TACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGACCTGCTTCAGGCTCTaGATGTCTTCTTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YRACALCSYRACAQGGHRTCFRL*MSSSRC Trigger: GCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGT...CCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | GCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCGGCACCTCTTTTGACTaGATGTTCTTCACTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALCSYRACAQGGHRHLASGTSFD*MFFTQL Trigger: CAGCTGAGTGAAGAACATGCAGTCAAAAGAGGTGCC...GCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR GCA 90 bp | TGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCTCTTCATTCTGCTGCTaGAGCACCTGGATCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CALCSYRACAQGGHRHLASSFCC*STWILS Trigger: AGAAAGGATCCAGGTGCTGCAGCAGCAGAATGAAGA...GGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR CCA 90 bp | CTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGGTGATGGCGACCGTATaGTTATTTTCCATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSYRACAQGGHRHLASTVMATV*LFSISS Trigger: GCTGGAGATGGAAAATAACCATACGGTCGCCATCAC...CGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR CCA 90 bp | GGCCACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATTCTTCTCCTGCAGGTaGATCTGCTGGTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GHRHLASTPSDGQKPELLFFSCR*ICWFFI Trigger: GATGAAGAACCAGCAGATCCACCTGCAGGAGAAGAA...TAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR CCA 90 bp | TGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGAAAAACCTTTCCCTaGAGAGTGACTGGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CALCSYRACAQGGHRHLARKTFP*RVTGWC Trigger: ACACCAGCCAGTCACTCTCCAGGGAAAGGTTTTTCT...GGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CCA 90 bp | ACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACTCCTCATTCCGGGGTTaGACAGATTTGAGCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TVQLPSMRTRWPPAPGQHSSFRG*TDLSST Trigger: AGTGGAGCTCAAATCTGTCCAACCCCGGAATGAGGA...GTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | ACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGTTGGCAAGTTCGATTaGCAGCTCCTTTTCTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TVQLPSMRTRWPPAPGQHVGKFD*QLLFFR Trigger: GCGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAAC...GTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | AGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTCCTCGTGGCTGGCAGTaGTGTCTTCCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLPKMHCAATEHAHCAAPRGWQ*CLPPAP Trigger: AGGAGCAGGTGGAAGACATCACTGCCAGCCACGAGG...AGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | ACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGCTTTTCCAGCTCGATaGTCTTCTTCTCCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWPARPQMGRSLSSYGWQAFPAR*SSSPAG Trigger: ACCTGCAGGAGAAGAAGATCATCGAGCTGGAAAAGC...CTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCACAGTTAACCGGAGGGGCAGGACAAAGAACACTGTGCCCCCTTCAGCTAGCTGCCAGCTGCAGCTaGGCAGCTGCTTGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GAQLTGGAGQRTLCPLQLAASCS*AAACSL Trigger: AAGAGAGCAAGCAGCTGCTCAGCTGCAGCTGGCAGC...TAGCTGAAGGGGGCACAGTGTTCTTTGTCCTGCCCCTCCGGTTAACTGTGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | CAAGAATGCAGTCCCAGCCCAAGGCAACTGAGTTGCTGCAGGCCAGCAGGACCTGTTTGGGTTTGGGCATaGGGATGGGCTTGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QECSPSPRQLSCCRPAGPVWVWA*GWAWPL Trigger: CAGAGGCCAAGCCCATCCTCATGCCCAAACCCAAAC...AGGTCCTGCTGGCCTGCAGCAACTCAGTTGCCTTGGGCTGGGACTGCATTCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | GAAGCCTTGACTGGAACCCCTGAGCCATCTTGTTGTGTGGTGATGGGGTCGAGTGGTGCTGGCAGCGCATaGGCAGCAGCTGGTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EALTGTPEPSCCVVMGSSGAGSA*AAAGPD Trigger: ATCAGGACCAGCTGCTGCGCATGCGCTGCCAGCACC...ACTCGACCCCATCACCACACAACAAGATGGCTCAGGGGTTCCAGTCAAGGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | ATGGAGAAACGAAGCCAGGGCCATGGGGAGATTTATTCAAGTGCCCAGGGTCGACGAGCCAGACCCAGCTaGCTGGCCTGCCACTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: MEKRSQGHGEIYSSAQGRRARPS*LACHSH Trigger: GTGTGAGTGGCAGGCCAGGCAGCTGGGTCTGGCTCG...TCGACCCTGGGCACTTGAATAAATCTCCCCATGGCCCTGGCTTCGTTTCTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | ACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGAGGTCTTCATTCTGCTaGTGCAGCACCTGGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TWPARPQMGRSLSSYGWQRSSFC*CSTWIL Trigger: AAGGATCCAGGTGCTGCAGCAGCAGAATGAAGACCT...CTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | TCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGTTCGCGCGCTCTCGGCCTaGAACTGCTGCTGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SESPQLYTHTSGYTHAAVRALSA*NCCCSR Trigger: GCGGCTGCAGCAGCAGTTCCAGGCCGAGAGCGCGCG...AACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | GCACAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATTCTTCCACCTGCTCCTaGTGCTGGCAGCGCATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AQGSERTLPKMHCAATEHSSTCS*CWQRMR Trigger: GCGCATGCGCTGCCAGCACCAGGAGCAGGTGGAAGA...ATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | AAGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGTCTTCCACCTGCTCCTaGTGCTGGCAGCGCATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KRQYQDGLAQGSERTLPKSSTCS*CWQRMR Trigger: GCGCATGCGCTGCCAGCACCAGGAGCAGGTGGAAGA...CTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | GCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCCTAGCTGCTCCTCCGTaGTTTTCCTTAGAGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATEHAHCAATEHAHKVATLAAPP*FSLELP Trigger: AGGAAGCTCTAAGGAAAACCACGGAGGAGCAGCTAG...GGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085558.11 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTGTGACAACTGTGTTCTaGTCGATCCTCGCTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WPARPQMGRSLSSYGWQGVTTVF*SILALR Trigger: CCTCAAAGCGAGGATCGACCAGAACACAGTTGTCAC...ACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | TACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGGTTGGGTCCCCCGTTTaGAGCTTCCAAAGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YRACALCSYRACAQGGHRVGSPV*SFQSSS Trigger: AGAACTACTTTGGAAGCTCCAAACGGGGGACCCAAC...CCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTGATTTCCAGGTGCTGGTATaGAGCCAGCGCAATGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PARPQMGRSLSSYGWQGDFQVLV*SQRNVS Trigger: AGACACATTGCGCTGGCTCCATACCAGCACCTGGAA...ATCACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085554.5 |
||
| CDS-3UTR TCA 90 bp | GCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGTTGGCAAGTTCGATTaGCAGCTCCTTTTCTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ATEHAHCAATEHAHKVATVGKFD*QLLFFR Trigger: GCGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAAC...GGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | CGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGACAGTCAGAGAAGCCTaGGACTCCCTCTGGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RCLRCIVQLPSMRTVQLPTVREA*DSLWLV Trigger: TACCAGCCAGAGGGAGTCTCAGGCTTCTCTGACTGT...CGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCCCGTTTGGAGCTTCCAAAGTAGTTCTTCGTTGGTTCGGCTCAGTCTCAGCAGGGCAGCCTCGTaGCTGGCAGTGATGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSPVWSFQSSSSLVRLSLSRAAS*LAVMSS Trigger: GGAAGACATCACTGCCAGCCACGAGGCTGCCCTGCT...GAGACTGAGCCGAACCAACGAAGAACTACTTTGGAAGCTCCAAACGGGGGACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| CDS-3UTR CCA 90 bp | AAGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGAGCAGGGCAGCCTCGTaGCTGGCAGTGATGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRQYQDGLAQGSERTLPKSRAAS*LAVMSS Trigger: GGAAGACATCACTGCCAGCCACGAGGCTGCCCTGCT...CTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGGCCAGCAGGACCTCCTGACTCCATGAAGAACAGAGCTGTTTGGCAGGTCTCCCTGGAGAGTGACTaGCTGGTGTCCTTTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CRPAGPPDSMKNRAVWQVSLESD*LVSFVA Trigger: GGCCACAAAGGACACCAGCCAGTCACTCTCCAGGGA...GACCTGCCAAACAGCTCTGTTCTTCATGGAGTCAGGAGGTCCTGCTGGCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | GGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGGCCCTTCCATCTTaGTGTCTGATGGGCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GQRGRCLRCIVQLPSMRTVALPS*CLMGWT Trigger: GGTCCAGCCCATCAGACACCAAGATGGAAGGGCCAC...AGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | CCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTGATTCAGAATCCTGCTCTTaGTTGATGGGAGACGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PARPQMGRSLSSYGWQGDSESCS*LMGDGT Trigger: TGTCCCGTCTCCCATCAACCAAGAGCAGGATTCTGA...ATCACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | ATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGCTCGCTGAGGACCTCTaGCTTGCGATCAGAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVQLPSMRTVQLPSMRTRLAEDL*LAIRIL Trigger: CAGGATTCTGATCGCAAGCCAGAGGTCCTCAGCGAG...CCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | GCACAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATCGAAGGCCGCCAGCTTaGCTGCAGGGAGTCGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AQGSERTLPKMHCAATEHRRPPA*LQGVVN Trigger: ATTCACGACTCCCTGCAGCCAAGCTGGCGGCCTTCG...ATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | CGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGGCGAGTGAGGTTTGGTaGCAGCAGAAGCTGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCLRCIVQLPSMRTVQLPASEVW*QQKLSS Trigger: AGAGGACAGCTTCTGCTGCCACCAAACCTCACTCGC...CGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | TGCAGGCCAGCAGGACCTCCTGACTCCATGAAGAACAGAGCTGTTTGGCAGGTCCTGGCGAGTGAGGTTTaGTGGCAGCAGAAGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRPAGPPDSMKNRAVWQVLASEV*WQQKLS Trigger: GGACAGCTTCTGCTGCCACCAAACCTCACTCGCCAG...GACCTGCCAAACAGCTCTGTTCTTCATGGAGTCAGGAGGTCCTGCTGGCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGGGAAGGGAGACAGACTCGGGTTTCCATGCCGAGAGGTCCGGATCATAGTTAGCGTGTCCACCTaGTCCTGTAATGTCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QPGKGDRLGFPCREVRIIVSVST*SCNVSR Trigger: GCGGCTGACATTACAGGACCAGGTGGACACGCTAAC...TATGATCCGGACCTCTCGGCATGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | CACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCATTCTCCACGTATTCCTaGAGGTTTGCATTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HCAATEHAHKVATGTWPAFSTYS*RFAFSS Trigger: GGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAA...TGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | GCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAAGTCTCTTCTTTTCCTaGGTCTCTTTCTCCACGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AHCAATEHAHKVATGTWPSLFFS*VSFSTY Trigger: ATACGTGGAGAAAGAGACCCAGGAAAAGAAGAGACT...TGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR TCA 90 bp | AGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTCACACTGTTCCCCTCTaGGGTACCTTCACCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLPKMHCAATEHAHCAAHTVPL*GTFTWR Trigger: TCTCCAGGTGAAGGTACCTCAGAGGGGAACAGTGTG...AGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR GCA 90 bp | TTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTACCTGCTTCAGGCTCTaGATGTCTTCTTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSYRACALCSYRACAQGTCFRL*MSSSRC Trigger: GCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGT...ACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | CCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGGGTGATACTGGGAGTCAATTCTaGATGAGTGATGCGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PARPQMGRSLSSYGWQGDTGSQF*MSDALV Trigger: AACGAGCGCATCACTCATGCAGAATTGACTCCCAGT...ATCACCCTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CCA 90 bp | CGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGTGCAGGTGGATCTGCTaGTTCTTCATCTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RCLRCIVQLPSMRTVQLPCRWIC*FFISST Trigger: GGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCA...CGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGGAAGGGAGACAGACTCGGGTTTCCATGCCGAGAGGTCCGGATCATAGGCTCCTTTTGGAAGTaGCTGTGGTATTGTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPGKGDRLGFPCREVRIIGSFWK*LWYCGL Trigger: CAGGCCACAATACCACAGCCACTTCCAAAAGGAGCC...TATGATCCGGACCTCTCGGCATGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CCA 90 bp | AGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTTTCTCCACGTATTCCTaGAGGTTTGCATTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SMRTVQLPSMRTRWPPAPFSTYS*RFAFSS Trigger: GGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAA...AGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| 3UTR CAA 72 bp | CCATGCCCAGGCCATTTCTGCTTGGCTCCATTGCTCTaGTCATCTTGGGCATGCTCAAAGACAGGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PCPGHFCLAPLL*SSWACSKTGRP Trigger: GGGCCTGCCTGTCTTTGAGCATGCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR TCA 90 bp | TTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGCTTTTCCAGCTCGATaGTCTTCTTCTCCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCSYRACALCSYRACAQGAFPAR*SSSPAG Trigger: ACCTGCAGGAGAAGAAGATCATCGAGCTGGAAAAGC...ACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR TCA 90 bp | CCTAAGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTCTCATTTCGAGGAGCTaGGGTCCTCTGCTTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PKRQYQDGLAQGSERTLPLISRS*GPLLWV Trigger: TACCCAAAGCAGAGGACCTCAGCTCCTCGAAATGAG...AGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | TGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCTTCTTCTCAAATTCATaGGTAGACATCAGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CALCSYRACAQGGHRHLAFFSNS*VDISSW Trigger: CCAAGAACTGATGTCTACTCATGAATTTGAGAAGAA...GGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | ACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCCGCAGAGATTGGCTCTaGAAAGTTAGCGTGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TLPKMHCAATEHAHCAATRRDWL*KVSVST Trigger: GGTGGACACGCTAACTTTTCAGAGCCAATCTCTGCG...GGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085558.11 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | AAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCCCGACAGTTGTCTGGTaGCAACTGTGTTCTGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KGQRGRCLRCIVQLPSMRPTVVW*QLCSGR Trigger: TCGACCAGAACACAGTTGTCACCAGACAACTGTCGG...GCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | CAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCCGACAGTTGTCTGGTaGCAACTGTGTTCTGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QGSERTLPKMHCAATEHAPTVVW*QLCSGR Trigger: TCGACCAGAACACAGTTGTCACCAGACAACTGTCGG...CGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCACCTCCGCCTGCTGCTaGCAGCCCAACCTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QFGIATVVYPHIWIYTCGTSACC*QPNLLS Trigger: GCTGAGGAGGTTGGGCTGGCAGCAGCAGGCGGAGGT...GCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCTGGGTCTCTTTCTCCACGTATTCCTGGAGGTTTGCATTTTCCTCCGATCCTGCACCTCCGCCTaGTGCTGCCAGCCCAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLGLFLHVFLEVCIFLRSCTSA*CCQPNL Trigger: GAGGTTGGGCTGGCAGCAGCAGGCGGAGGTGCAGGA...TCGGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAAAGAGACCCAGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| CDS-3UTR GCA 90 bp | TCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGTTGGTGCTGGCAGCGCATaGGCAGCAGCTGGTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SESPQLYTHTSGYTHAAVGAGSA*AAAGPD Trigger: ATCAGGACCAGCTGCTGCGCATGCGCTGCCAGCACC...AACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCATGTCTTCTTCCAGGTaGTGGTATGGAGCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGQRGRCLRCIVQLPSMRMSSSR*WYGASA Trigger: TGCGCTGGCTCCATACCAGCACCTGGAAGAAGACAT...GCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTATGTCTTCTTCCAGGTaGTGGTATGGAGCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLPKMHCAATEHAHCAAMSSSR*WYGASA Trigger: TGCGCTGGCTCCATACCAGCACCTGGAAGAAGACAT...AGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CCTAAGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTATGTCTTCTTCCAGGTaGTGGTATGGAGCCAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKRQYQDGLAQGSERTLPMSSSR*WYGASA Trigger: TGCGCTGGCTCCATACCAGCACCTGGAAGAAGACAT...AGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGGGAAGGGAGACAGACTCGGGTTTCCATGCCGAGAGGTCCGGATCATAGATGGGCTTGGCCTCTaGCCTTTCTTCCATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPGKGDRLGFPCREVRIIDGLGL*PFFHFL Trigger: GAGAAAATGGAAGAAAGGGCAGAGGCCAAGCCCATC...TATGATCCGGACCTCTCGGCATGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | CGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACGCTTCTGGATCTTTCTaGAATTCTTTCTTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RACALCSYRACAQGGHRHASGSF*NSFFAP Trigger: TGGAGCAAAGAAAGAATTGCAGAAAGATCCAGAAGC...GTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGGAAAAGACCTGTTTCTTCTCTGTGTATCTACCGTGTGTGTCTCCAGACCCAGCTGCCTGGCCTaGCACTCACACCTGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PKGKDLFLLCVSTVCVSRPSCLA*HSHLSR Trigger: GCGGGACAGGTGTGAGTGGCAGGCCAGGCAGCTGGG...TCTGGAGACACACACGGTAGATACACAGAGAAGAAACAGGTCTTTTCCCTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGTTTGCATTTTCCTCCGACAGTTGTCTGGTGACAACTGTGTTCTGGTCTCTTCCACCTGCTCCTaGTGCTGGCAGCGCATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LEVCIFLRQLSGDNCVLVSSTCS*CWQRMR Trigger: GCGCATGCGCTGCCAGCACCAGGAGCAGGTGGAAGA...GACCAGAACACAGTTGTCACCAGACAACTGTCGGAGGAAAATGCAAACCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| CDS-3UTR CCA 90 bp | CGTTTCACTGCGTTCCCTTGTCTGGGAGAGCCTTCTGGGGCTAAGATGGGACTACCAGCTGGAAAGACTTaGTCCCTGAACACACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RFTAFPCLGEPSGAKMGLPAGKT*SLNTLG Trigger: CCCCAGTGTGTTCAGGGACCAAGTCTTTCCAGCTGG...TAGTCCCATCTTAGCCCCAGAAGGCTCTCCCAGACAAGGGAACGCAGTGAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTGTCACCATGCCCAGGCCATTTCTGCTTGGCTCCATTGCTCTTGTCATACAGTTGTCTCTGGGTaGAGGAGGGGCGCTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSCHHAQAISAWLHCSCHTVVSG*RRGAGV Trigger: TACCCCAGCGCCCCTCCTCCACCCAGAGACAACTGT...ATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | GCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCCAGATTTTGGTAGACTaGCCTTTGCAGCATTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATEHAHCAATEHAHKVATQILVD*PLQHWN Trigger: ATTCCAATGCTGCAAAGGCCAGTCTACCAAAATCTG...GGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | CCTTCAGCTAATCCCAGAGTACCTGACCTCCAGCCCCAAACCCATCCAGACATCAGGGCGTCGAAGCCTTaGATGGCTTTCTTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSANPRVPDLQPQTHPDIRASKP*MAFFSS Trigger: GGAGCTGAAGAAAGCCATCCAAGGCTTCGACGCCCT...GATGTCTGGATGGGTTTGGGGCTGGAGGTCAGGTACTCTGGGATTAGCTGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | ACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGAGTCTCTTCTTTTCCTaGGTCTCTTTCTCCACGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TWPARPQMGRSLSSYGWQSLFFS*VSFSTY Trigger: ATACGTGGAGAAAGAGACCCAGGAAAAGAAGAGACT...CTGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | GGAGCACAGTTAACCGGAGGGGCAGGACAAAGAACACTGTGCCCCCTTCAGCTATTTAATCGGGCTGGTTaGGTCCCCCGTTTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GAQLTGGAGQRTLCPLQLFNRAG*VPRLEL Trigger: AAGCTCCAAACGGGGGACCCAACCAGCCCGATTAAA...TAGCTGAAGGGGGCACAGTGTTCTTTGTCCTGCCCCTCCGGTTAACTGTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| 3UTR CAA 72 bp | GGGTCGAGTCATAGAACCAAACTGAAAATGGGGGTGTaGCCTATGAGAGGCCGTGATGGGAGCCATGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSHRTKLKMGV*PMRGRDGSHGG Trigger: GCCACCATGGCTCCCATCACGGCCTCTCATAGGCAACACCCCCATTTTCAGTTTGGTTCTATGACTCGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | CCTAAGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTGCTTTTCCAGCTCGATaGTCTTCTTCTCCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKRQYQDGLAQGSERTLPAFPAR*SSSPAG Trigger: ACCTGCAGGAGAAGAAGATCATCGAGCTGGAAAAGC...AGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | AGCACAGTTAACCGGAGGGGCAGGACAAAGAACACTGTGCCCCCTTCAGCTAATCCTTTCCCTGGAGAGTaGCTGGCTGGTGTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: STVNRRGRTKNTVPPSANPFPGE*LAGVLC Trigger: ACAAAGGACACCAGCCAGTCACTCTCCAGGGAAAGG...ATTAGCTGAAGGGGGCACAGTGTTCTTTGTCCTGCCCCTCCGGTTAACTGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | CCTTCAGCTAATCCCAGAGTACCTGACCTCCAGCCCCAAACCCATCCAGACATCGACTTCCCTGTCCCTTaGCCTAAACACACTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSANPRVPDLQPQTHPDIDFPVP*PKHTSG Trigger: TCCGGAAGTGTGTTTAGGTCAAGGGACAGGGAAGTC...GATGTCTGGATGGGTTTGGGGCTGGAGGTCAGGTACTCTGGGATTAGCTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | GAAGCCTTGACTGGAACCCCTGAGCCATCTTGTTGTGTGGTGATGGGGTCGAGTATACTTCTTTCCTCGTaGCAGCCAGGACCTTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EALTGTPEPSCCVVMGSSILLSS*QPGPCA Trigger: GGCACAAGGTCCTGGCTGTCACGAGGAAAGAAGTAT...ACTCGACCCCATCACCACACAACAAGATGGCTCAGGGGTTCCAGTCAAGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | ATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCTTCTTCTCAAATTCATaGGTAGACATCAGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MRTVQLPSMRTRWPPAPGFFSNS*VDISSW Trigger: CCAAGAACTGATGTCTACTCATGAATTTGAGAAGAA...GCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | CGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACTTCTTCTCAAATTCATaGGTAGACATCAGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RACALCSYRACAQGGHRHFFSNS*VDISSW Trigger: CCAAGAACTGATGTCTACTCATGAATTTGAGAAGAA...GTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CACAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGGTCTCCTTCTCCTTCTaGAGCTTCTCACACTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HKGQRGRCLRCIVQLPSMVSFSF*SFSHLA Trigger: CGCCAAGTGTGAGAAGCTGCAGAAGGAGAAGGAGAC...CATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | CAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCGCCTGGAACTGCTGCTaGAGCCGCTCCTGCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QFGIATVVYPHIWIYTCGAWNCC*SRSCNS Trigger: GGAGTTGCAGGAGCGGCTGCAGCAGCAGTTCCAGGC...GCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | AAGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGACCTGCTTCAGGCTCTaGATGTCTTCTTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRQYQDGLAQGSERTLPKTCFRL*MSSSRC Trigger: GCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGT...CTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCCTTGACTGGAACCCCTGAGCCATCTTGTTGTGTGGTGATGGGGTCGAGTCTGCAGCTGAGCAGCTaGTTGCTCTCTTCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EALTGTPEPSCCVVMGSSLQLSS*LLSSAL Trigger: AAGAGCTGAAGAGAGCAAGCAGCTGCTCAGCTGCAG...ACTCGACCCCATCACCACACAACAAGATGGCTCAGGGGTTCCAGTCAAGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTGTCACCATGCCCAGGCCATTTCTGCTTGGCTCCATTGCTCTTGTCATTGGGAGACGGGACATTaGACCCAATCCCAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSCHHAQAISAWLHCSCHWETGH*TQSQLR Trigger: CCTCAGCTGGGATTGGGTGCAATGTCCCGTCTCCCA...ATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | CAAGAATGCAGTCCCAGCCCAAGGCAACTGAGTTGCTGCAGGCCAGCAGGACCTTGCTTCAGAGGAGCCTaGTCTTCATTGCCAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QECSPSPRQLSCCRPAGPCFRGA*SSLPKV Trigger: AACCTTTGGCAATGAAGAGCAGGCTCCTCTGAAGCA...AGGTCCTGCTGGCCTGCAGCAACTCAGTTGCCTTGGGCTGGGACTGCATTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | GTCACCATGCCCAGGCCATTTCTGCTTGGCTCCATTGCTCTTGTCATCTTGGGCTTAGAAGGCAGAGCCTaGTTCAGAGGAGCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTMPRPFLLGSIALVILGLEGRA*FRGACS Trigger: AGAGCAGGCTCCTCTGAAGCAGGCTCTGCCTTCTAA...GCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | CGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGTCTTCATTCTGCTGCTaGAGCACCTGGATCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCLRCIVQLPSMRTVQLPSSFCC*STWILS Trigger: AGAAAGGATCCAGGTGCTGCAGCAGCAGAATGAAGA...CGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | GAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAAGGTCTTCATTCTGCTaGTGCAGCACCTGGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERTLPKMHCAATEHAHCARSSFC*CSTWIL Trigger: AAGGATCCAGGTGCTGCAGCAGCAGAATGAAGACCT...TGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | AGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTAGGTCTTCATTCTGCTaGTGCAGCACCTGGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTLPKMHCAATEHAHCAARSSFC*CSTWIL Trigger: AAGGATCCAGGTGCTGCAGCAGCAGAATGAAGACCT...AGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR CCA 90 bp | GGGTCCCCCGTTTGGAGCTTCCAAAGTAGTTCTTCGTTGGTTCGGCTCAGTCTCTGCAGGTGGATCTGCTaGTTCTTCATCTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GSPVWSFQSSSSLVRLSLCRWIC*FFISST Trigger: GGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCA...GAGACTGAGCCGAACCAACGAAGAACTACTTTGGAAGCTCCAAACGGGGGACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
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| CDS-3UTR CCA 90 bp | CACAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGTGCAGGTGGATCTGCTaGTTCTTCATCTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: HKGQRGRCLRCIVQLPSMCRWIC*FFISST Trigger: GGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCA...CATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCCTGCATTCCTCCAGCTaGAAAGACTTGGTCCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGQRGRCLRCIVQLPSMRLHSSS*KDLVPE Trigger: TTCAGGGACCAAGTCTTTCCAGCTGGAGGAATGCAG...GCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | GAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCACTAGCTGCTCCTCCGTaGTTTTCCTTAGAGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERTLPKMHCAATEHAHCALAAPP*FSLELP Trigger: AGGAAGCTCTAAGGAAAACCACGGAGGAGCAGCTAG...TGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085558.11 ENSMUST00000110515.9 |
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| CDS-3UTR CCA 90 bp | AGTCCAGTGGCTGATGGATGCCGGCTGGCCGTTTCACTGCGTTCCCTTGTCTGGTTCTCCACGTATTCCTaGAGGTTTGCATTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPVADGCRLAVSLRSLVWFSTYS*RFAFSS Trigger: GGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAA...CCAGACAAGGGAACGCAGTGAAACGGCCAGCCGGCATCCATCAGCCACTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | AAGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGTTTAATCGGGCTGGTTaGGTCCCCCGTTTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRQYQDGLAQGSERTLPKFNRAG*VPRLEL Trigger: AAGCTCCAAACGGGGGACCCAACCAGCCCGATTAAA...CTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR CAA 72 bp | GCTTACACCTTCCTAAGCGCCAATACCAGGATGGTCTaGCACAAGGGTCAGAGAGGACGCTGCCTAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: AYTFLSANTRMV*HKGQRGRCLRC Trigger: GCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTTAGGAAGGTGTAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR CAA 72 bp | CTGTCACCATGCCCAGGCCATTTCTGCTTGGCTCCATaGCTCTTGTCATCTTGGGCATGCTCAAAGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPCPGHFCLAP*LLSSWACSKTG Trigger: GCCTGTCTTTGAGCATGCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | GGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTAGGCAACTTCATCCCTaGTGTTGGCAAGTTCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: GQRGRCLRCIVQLPSMRTRQLHP*CWQVRL Trigger: CAATCGAACTTGCCAACATCAGGGATGAAGTTGCCT...AGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTGGAGTTGTTTCTCTTTTGACCTCCGCCTGCTGCTaGCAGCCCAACCTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSAMEVRRSRTIGVVSLLTSACC*QPNLLS Trigger: GCTGAGGAGGTTGGGCTGGCAGCAGCAGGCGGAGGT...CAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | ACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCTCTTCATTCTGCTGCTaGAGCACCTGGATCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLPKMHCAATEHAHCAATSSFCC*STWILS Trigger: AGAAAGGATCCAGGTGCTGCAGCAGCAGAATGAAGA...GGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCTCTTCATTCTGCTGCTaGAGCACCTGGATCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGQRGRCLRCIVQLPSMRSSFCC*STWILS Trigger: AGAAAGGATCCAGGTGCTGCAGCAGCAGAATGAAGA...GCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | GTCACCATGCCCAGGCCATTTCTGCTTGGCTCCATTGCTCTTGTCATCTTGGGCAGGTCTTCATTCTGCTaGTGCAGCACCTGGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTMPRPFLLGSIALVILGRSSFC*CSTWIL Trigger: AAGGATCCAGGTGCTGCAGCAGCAGAATGAAGACCT...GCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | ATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGGTATTCCTGGAGGTTTaGATTTTCCTCCGACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IVQLPSMRTVQLPSMRTRVFLEV*IFLRQL Trigger: CAACTGTCGGAGGAAAATGCAAACCTCCAGGAATAC...CCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGTTGGTACAAGGAGAGCAGGGCAGCCTCGTaGCTGGCAGTGATGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVVYPHIWIYTCGGWYKESRAAS*LAVMSS Trigger: GGAAGACATCACTGCCAGCCACGAGGCTGCCCTGCT...CTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | CCTAAGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTGTGATGGCGACCGTATaGTTATTTTCCATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKRQYQDGLAQGSERTLPVMATV*LFSISS Trigger: GCTGGAGATGGAAAATAACCATACGGTCGCCATCAC...AGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | ACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCTTCTTCTCCTGCAGGTaGATCTGCTGGTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLPKMHCAATEHAHCAATFFSCR*ICWFFI Trigger: GATGAAGAACCAGCAGATCCACCTGCAGGAGAAGAA...GGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071878.12 ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | GGAGCACAGTTAACCGGAGGGGCAGGACAAAGAACACTGTGCCCCCTTCAGCTATTCTTCTCCTGCAGGTaGATCTGCTGGTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GAQLTGGAGQRTLCPLQLFFSCR*ICWFFI Trigger: GATGAAGAACCAGCAGATCCACCTGCAGGAGAAGAA...TAGCTGAAGGGGGCACAGTGTTCTTTGTCCTGCCCCTCCGGTTAACTGTGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | TGCAGGCCAGCAGGACCTCCTGACTCCATGAAGAACAGAGCTGTTTGGCAGGTCCCTTGGGAATGTGCCTaGGAATCTCAGCATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CRPAGPPDSMKNRAVWQVPWECA*ESQHPF Trigger: AAAAGGATGCTGAGATTCCCAGGCACATTCCCAAGG...GACCTGCCAAACAGCTCTGTTCTTCATGGAGTCAGGAGGTCCTGCTGGCCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | GTCACCATGCCCAGGCCATTTCTGCTTGGCTCCATTGCTCTTGTCATCTTGGGCCCGAACGATAGAAAGTaGGAGGGACTTCATAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTMPRPFLLGSIALVILGPNDRK*EGLHSG Trigger: CCCACTATGAAGTCCCTCCCACTTTCTATCGTTCGG...GCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | AGTCCAGTGGCTGATGGATGCCGGCTGGCCGTTTCACTGCGTTCCCTTGTCTGGAGTCTCTTCTTTTCCTaGGTCTCTTTCTCCACGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SPVADGCRLAVSLRSLVWSLFFS*VSFSTY Trigger: ATACGTGGAGAAAGAGACCCAGGAAAAGAAGAGACT...CCAGACAAGGGAACGCAGTGAAACGGCCAGCCGGCATCCATCAGCCACTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | CTCTGTCACGCAGAGATTGGCTCTGAAAAGTTAGCGTGTCCACCTGGTCCTGTAGTCTCCTTCTCCTTCTaGAGCTTCTCACACTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LCHAEIGSEKLACPPGPVVSFSF*SFSHLA Trigger: CGCCAAGTGTGAGAAGCTGCAGAAGGAGAAGGAGAC...TACAGGACCAGGTGGACACGCTAACTTTTCAGAGCCAATCTCTGCGTGACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
||
| CDS-3UTR GCA 90 bp | ATGCAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGCCTGGAACTGCTGCTaGAGCCGCTCCTGCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: MQFGIATVVYPHIWIYTCAWNCC*SRSCNS Trigger: GGAGTTGCAGGAGCGGCTGCAGCAGCAGTTCCAGGC...GCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | AGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTGTATTCCTGGAGGTTTaGATTTTCCTCCGACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLPKMHCAATEHAHCAAVFLEV*IFLRQL Trigger: CAACTGTCGGAGGAAAATGCAAACCTCCAGGAATAC...AGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | ATGCAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCTCTTCCACCTGCTCCTaGTGCTGGCAGCGCATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: MQFGIATVVYPHIWIYTCSSTCS*CWQRMR Trigger: GCGCATGCGCTGCCAGCACCAGGAGCAGGTGGAAGA...GCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAATGCAGTCCCAGCCCAAGGCAACTGAGTTGCTGCAGGCCAGCAGGACCTTCTCTTTGCCTTTTCTaGCTTCCAAATTGCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QECSPSPRQLSCCRPAGPSLCLF*LPNCYL Trigger: GAGGTAGCAATTTGGAAGCCAGAAAAGGCAAAGAGA...AGGTCCTGCTGGCCTGCAGCAACTCAGTTGCCTTGGGCTGGGACTGCATTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | TTGACTGGAACCCCTGAGCCATCTTGTTGTGTGGTGATGGGGTCGAGTCATAGACGTCGAAGCCTTGGATaGCTTTCTTCAGCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTGTPEPSCCVVMGSSHRRRSLG*LSSAPF Trigger: GAAGGGAGCTGAAGAAAGCCATCCAAGGCTTCGACG...TCTATGACTCGACCCCATCACCACACAACAAGATGGCTCAGGGGTTCCAGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | AGCACAGTTAACCGGAGGGGCAGGACAAAGAACACTGTGCCCCCTTCAGCTAATGTTGGGTCCCCCGTTTaGAGCTTCCAAAGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STVNRRGRTKNTVPPSANVGSPV*SFQSSS Trigger: AGAACTACTTTGGAAGCTCCAAACGGGGGACCCAAC...ATTAGCTGAAGGGGGCACAGTGTTCTTTGTCCTGCCCCTCCGGTTAACTGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | GCACAAGTTAGAAAACTGCTGACCTTCACTAAAATATGTCAGCGTATCGCGTTATGCTGCAGCCGCTCCTaGAACTCCTGCACCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQVRKLLTFTKICQRIALCCSRS*NSCTSA Trigger: GGCGGAGGTGCAGGAGTTGCAGGAGCGGCTGCAGCA...TAACGCGATACGCTGACATATTTTAGTGAAGGTCAGCAGTTTTCTAACTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGTTGGTACAAGGAGTGGTCTGCGACCTCCTaGAGGAACTTCTCGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TVVYPHIWIYTCGGWYKEWSATS*RNFSLI Trigger: GATGAGCGAGAAGTTCCTGCAGGAGGTCGCAGACCA...CTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | AGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGAGTATTCCTGGAGGTTTaGATTTTCCTCCGACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SANTRMVLHKGQRGRCLRVFLEV*IFLRQL Trigger: CAACTGTCGGAGGAAAATGCAAACCTCCAGGAATAC...TCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | TCCTGGAGGTTTGCATTTTCCTCCGACAGTTGTCTGGTGACAACTGTGTTCTGGTTCCAGGTGCTGGTATaGAGCCAGCGCAATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SWRFAFSSDSCLVTTVFWFQVLV*SQRNLG Trigger: TCCAAGATTGCGCTGGCTCCATACCAGCACCTGGAA...CCAGAACACAGTTGTCACCAGACAACTGTCGGAGGAAAATGCAAACCTCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| CDS-3UTR CCA 90 bp | TCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGTTTGCAGGTGGATCTGCTaGTTCTTCATCTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SESPQLYTHTSGYTHAAVCRWIC*FFISST Trigger: GGTGCTGGAGATGAAGAACCAGCAGATCCACCTGCA...AACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCCTTGACTGGAACCCCTGAGCCATCTTGTTGTGTGGTGATGGGGTCGAGTGGAGTGTTGTCAGTTTaGGCTGCATTTTCTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EALTGTPEPSCCVVMGSSGVLSV*AAFSRR Trigger: CCTTCTAGAAAATGCAGCCCAAACTGACAACACTCC...ACTCGACCCCATCACCACACAACAAGATGGCTCAGGGGTTCCAGTCAAGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | CAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCGTTAGCGTGTCCACCTaGTCCTGTAATGTCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QFGIATVVYPHIWIYTCGVSVST*SCNVSR Trigger: GCGGCTGACATTACAGGACCAGGTGGACACGCTAAC...GCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085558.11 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | AAGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGTTCTCCACGTATTCCTaGAGGTTTGCATTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRQYQDGLAQGSERTLPKFSTYS*RFAFSS Trigger: GGAGGAAAATGCAAACCTCCAGGAATACGTGGAGAA...CTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAAGTCTCTTCTTTTCCTaGGTCTCTTTCTCCACGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ERTLPKMHCAATEHAHCASLFFS*VSFSTY Trigger: ATACGTGGAGAAAGAGACCCAGGAAAAGAAGAGACT...TGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | CAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGGGTTGGACAGATTTaGGCTCCACTTTGGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QFGIATVVYPHIWIYTCGGVGQI*APLWTS Trigger: GGAAGTCCAAAGTGGAGCTCAAATCTGTCCAACCCC...GCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | ACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGTTGGTACAAGGAGCCTACCTACACCGGCTaGCATTTTACCGGTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVVYPHIWIYTCGGWYKEPTYTG*HFTGES Trigger: AGACTCACCGGTAAAATGTCAGCCGGTGTAGGTAGG...CTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | TTGACTGGAACCCCTGAGCCATCTTGTTGTGTGGTGATGGGGTCGAGTCATAGAGGCTTTCTTGAGGTCTaGAGGATCAGAACCGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTGTPEPSCCVVMGSSHRGFLEV*RIRTVE Trigger: TTCTACGGTTCTGATCCTTCAGACCTCAAGAAAGCC...TCTATGACTCGACCCCATCACCACACAACAAGATGGCTCAGGGGTTCCAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | GCACAAGTTAGAAAACTGCTGACCTTCACTAAAATATGTCAGCGTATCGCGTTAGGTGCTGGCAGCGCATaGGCAGCAGCTGGTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQVRKLLTFTKICQRIALGAGSA*AAAGPD Trigger: ATCAGGACCAGCTGCTGCGCATGCGCTGCCAGCACC...TAACGCGATACGCTGACATATTTTAGTGAAGGTCAGCAGTTTTCTAACTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | AGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGACAGCTACCATCTCTTTaGCTTTTCTGGCTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SANTRMVLHKGQRGRCLRQLPSL*LFWLPN Trigger: ATTTGGAAGCCAGAAAAGGCAAAGAGATGGTAGCTG...TCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | TACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGTGATGGCGACCGTATaGTTATTTTCCATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YQDGLAQGSERTLPKMHCVMATV*LFSISS Trigger: GCTGGAGATGGAAAATAACCATACGGTCGCCATCAC...ACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | TCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGTTGTGACAACTGTGTTCTaGTCGATCCTCGCTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SESPQLYTHTSGYTHAAVVTTVF*SILALR Trigger: CCTCAAAGCGAGGATCGACCAGAACACAGTTGTCAC...AACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | CAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCTTTAATCGGGCTGGTTaGGTCCCCCGTTTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFGIATVVYPHIWIYTCGFNRAG*VPRLEL Trigger: AAGCTCCAAACGGGGGACCCAACCAGCCCGATTAAA...GCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR CAA 72 bp | AGACTCCTCTGTCATGAAGATGAGCCATGCATGGTCTaGATCTTCTCCAAGTTCAGGCTCATCCTCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLCHEDEPCMV*IFSKFRLILAA Trigger: TGCAGCGAGGATGAGCCTGAACTTGGAGAAGATCAAGACCATGCATGGCTCATCTTCATGACAGAGGAGTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | GTTGTATACCCACACATCTGGATATACACATGCGGCGGTTGGTACAAGGAGGGTGTTGGCAAGTTCGATTaGCAGCTCCTTTTCTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VVYPHIWIYTCGGWYKEGVGKFD*QLLFFR Trigger: GCGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAAC...ACCCTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | CAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCGCTTTTCCAGCTCGATaGTCTTCTTCTCCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QFGIATVVYPHIWIYTCGAFPAR*SSSPAG Trigger: ACCTGCAGGAGAAGAAGATCATCGAGCTGGAAAAGC...GCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGGAAAAGACCTGTTTCTTCTCTGTGTATCTACCGTGTGTGTCTCCAGACGCAGAGATTGGCTCTaGAAAGTTAGCGTGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PKGKDLFLLCVSTVCVSRRRDWL*KVSVST Trigger: GGTGGACACGCTAACTTTTCAGAGCCAATCTCTGCG...TCTGGAGACACACACGGTAGATACACAGAGAAGAAACAGGTCTTTTCCCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | GTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTGGAGTTGTTTCTCTTTTGCGTCTCCTTCTCCTTCTaGAGCTTCTCACACTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLPWKFVAQGQLELFLFCVSFSF*SFSHLA Trigger: CGCCAAGTGTGAGAAGCTGCAGAAGGAGAAGGAGAC...GCAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTTTTCCTGGGTCTCTTTCTCCACGTATTCCTGGAGGTTTGCATTTTCCTCACCTGCTTCAGGCTCTaGATGTCTTCTTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLFLGLFLHVFLEVCIFLTCFRL*MSSSRC Trigger: GCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGT...GAGGAAAATGCAAACCTCCAGGAATACGTGGAGAAAGAGACCCAGGAAAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| CDS-3UTR CCA 90 bp | GTTGTATACCCACACATCTGGATATACACATGCGGCGGTTGGTACAAGGAGGGTTTCTTCTCCTGCAGGTaGATCTGCTGGTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VVYPHIWIYTCGGWYKEGFFSCR*ICWFFI Trigger: GATGAAGAACCAGCAGATCCACCTGCAGGAGAAGAA...ACCCTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CCA 90 bp | CACAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGGGGCTTTTTGGCTTCTaGATCTTTCTGCAATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HKGQRGRCLRCIVQLPSMGLFGF*IFLQFF Trigger: AAAGAATTGCAGAAAGATCCAGAAGCCAAAAAGCCC...CATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTGTCACCATGCCCAGGCCATTTCTGCTTGGCTCCATTGCTCTTGTCATAAACAGCGGGCTTTTTaGCTTCTGGATCTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSCHHAQAISAWLHCSCHKQRAF*LLDLSA Trigger: TGCAGAAAGATCCAGAAGCCAAAAAGCCCGCTGTTT...ATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CCA 90 bp | ACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGTTGGTACAAGGAGGTTGGGTCCCCCGTTTaGAGCTTCCAAAGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVVYPHIWIYTCGGWYKEVGSPV*SFQSSS Trigger: AGAACTACTTTGGAAGCTCCAAACGGGGGACCCAAC...CTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| 3UTR CAA 72 bp | ACTGCACCACATTCTATAATCACATCGAACTCTGTATaGCTGAGTACCTGCCCTCAGCAGGTACAGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAPHSIITSNSV*LSTCPQQVQLW Trigger: CCACAGCTGTACCTGCTGAGGGCAGGTACTCAGCAATACAGAGTTCGATGTGATTATAGAATGTGGTGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGGAAAAGACCTGTTTCTTCTCTGTGTATCTACCGTGTGTGTCTCCAGAGTTGGCAAGTTCGATTaGCAGCTCCTTTTCTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PKGKDLFLLCVSTVCVSRVGKFD*QLLFFR Trigger: GCGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAAC...TCTGGAGACACACACGGTAGATACACAGAGAAGAAACAGGTCTTTTCCCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | ATGCAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCACTGGCTTGACCTACTaGATTCCTCCAGCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MQFGIATVVYPHIWIYTCTGLTY*IPPAGK Trigger: CTTTCCAGCTGGAGGAATGCAGTAGGTCAAGCCAGT...GCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | GTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTGGAGTTGTTTCTCTTTTGCTTTCTTCTAGGCTGCTaGCTCTTCGTACTCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLPWKFVAQGQLELFLFCFLLGC*LFVLQA Trigger: AGCTTGGAGTACGAAGAGGCAGCAGCCTAGAAGAAA...GCAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR GCA 90 bp | TTGTATACCCACACATCTGGATATACACATGCGGCGGTTGGTACAAGGAGGGTTTCATTTCTTCTAGGCTaGTGCCTCTTCGTACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYTHTSGYTHAAVGTRRVSFLLG*CLFVLQ Trigger: TTGGAGTACGAAGAGGCAGCAGCCTAGAAGAAATGA...AACCCTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CCA 90 bp | CCAAAGGGAAAAGACCTGTTTCTTCTCTGTGTATCTACCGTGTGTGTCTCCAGAGTGATGGCGACCGTATaGTTATTTTCCATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKGKDLFLLCVSTVCVSRVMATV*LFSISS Trigger: GCTGGAGATGGAAAATAACCATACGGTCGCCATCAC...TCTGGAGACACACACGGTAGATACACAGAGAAGAAACAGGTCTTTTCCCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CCA 90 bp | GTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTGGAGTTGTTTCTCTTTTGCTTCTTCTCCTGCAGGTaGATCTGCTGGTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VLPWKFVAQGQLELFLFCFFSCR*ICWFFI Trigger: GATGAAGAACCAGCAGATCCACCTGCAGGAGAAGAA...GCAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| 3UTR CAA 72 bp | TGTATACCCACACATCTGGATATACACATGCGGCGGTaGGTACAAGGAGGGTTTCGTGTATTCAAAACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CIPTHLDIHMRR*VQGGFRVFKTE Trigger: CTCCGTTTTGAATACACGAAACCCTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | GTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTGGAGTTGTTTCTCTTTTGCGTATTCCTGGAGGTTTaGATTTTCCTCCGACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLPWKFVAQGQLELFLFCVFLEV*IFLRQL Trigger: CAACTGTCGGAGGAAAATGCAAACCTCCAGGAATAC...GCAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR CCA 90 bp | GTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTGGAGTTGTTTCTCTTTTGCAAAACAGGATTTCTTTaGAGCGAGTGGGACACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLPWKFVAQGQLELFLFCKTGFL*SEWDTH Trigger: ATGAGTGTCCCACTCGCTCCAAAGAAATCCTGTTTT...GCAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CCA 90 bp | GCACAAGTTAGAAAACTGCTGACCTTCACTAAAATATGTCAGCGTATCGCGTTAGTGACAACTGTGTTCTaGTCGATCCTCGCTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQVRKLLTFTKICQRIALVTTVF*SILALR Trigger: CCTCAAAGCGAGGATCGACCAGAACACAGTTGTCAC...TAACGCGATACGCTGACATATTTTAGTGAAGGTCAGCAGTTTTCTAACTTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR GCA 90 bp | AGTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTGGAGTTGTTTCTCTTTTGCTCTTTCCAAAGAAATaGTTAGTAGAGACAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSAMEVRRSRTIGVVSLLLFPKK*LVETAR Trigger: CCTGGCTGTCTCTACTAAGCATTTCTTTGGAAAGAG...CAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| 3UTR CAA 72 bp | ATCGGCACTGTGTTGACTGTTAAAACTACTTCTCCTTaGTGGATCATGCCTCTAATCTTCCATAGCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: IGTVLTVKTTSP*WIMPLIFHSTT Trigger: TGTAGTGCTATGGAAGATTAGAGGCATGATCCACAAAGGAGAAGTAGTTTTAACAGTCAACACAGTGCCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 90 bp | GCAGGCACATGGTCCTGCGGCCCCAAGGTATCCAGCTGCACTGGCTaGAGGTCCGTGGGAGGGACGCTGCCAGCTGCAGCTGAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGTWSCGPKVSSCTG*RSVGGTLPAAAEQL Trigger: CAGCTGCTCAGCTGCAGCTGGCAGCGTCCCTCCCACGGACCTGCAGCCAGTGCAGCTGGATACCTTGGGGCCGCAGGACCATGTGCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 90 bp | CCGGCTGCACGCTGTCCAGGGATTGGCTGCTGGGCACTGCAGAGATaGTGGAGCTCCTCACGAAGCCGAAGGCCGCCAGCTTGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAARCPGIGCWALQR*WSSSRSRRPPAWLQ Trigger: CTGCAGCCAAGCTGGCGGCCTTCGGCTTCGTGAGGAGCTCCAGCATCTCTGCAGTGCCCAGCAGCCAATCCCTGGACAGCGTGCAGCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 90 bp | ATGGCTTTCTTCAGCTCCCTTCGAGCCAGACCCAGCTGCCTGGCCTaGCACTCACACCTGTCCCGCAGTCGCTGGGCCAGCTGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MAFFSSLRARPSCLA*HSHLSRSRWASCRS Trigger: GGAGCGGCAGCTGGCCCAGCGACTGCGGGACAGGTGTGAGTGGCAGGCCAGGCAGCTGGGTCTGGCTCGAAGGGAGCTGAAGAAAGCCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | GGTCCTGCGGCCCCAAGGTATCCAGCTGCACTGGCTGCAGGTCCGTaGGAGGGACGCTGCCAGCTGCAGCTGAGCAGCTGCTTGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPAAPRYPAALAAGP*EGRCQLQLSSCLLS Trigger: AGAGAGCAAGCAGCTGCTCAGCTGCAGCTGGCAGCGTCCCTCCCACGGACCTGCAGCCAGTGCAGCTGGATACCTTGGGGCCGCAGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | CTTGGATGGCTTTCTTCAGCTCCCTTCGAGCCAGACCCAGCTGCCTaGCCTGCCACTCACACCTGTCCCGCAGTCGCTGGGCCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGWLSSAPFEPDPAA*PATHTCPAVAGPAA Trigger: GGCAGCTGGCCCAGCGACTGCGGGACAGGTGTGAGTGGCAGGCCAGGCAGCTGGGTCTGGCTCGAAGGGAGCTGAAGAAAGCCATCCAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | CACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGGGTGTGTAGGAGGCTaGGGGATCCCACTGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRHLASTPSDGQKPELLWGCVGG*GIPLEQ Trigger: CTGCTCCAGTGGGATCCCCAAGCCTCCTACACACCC...CCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | CTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGCTGAGGTCCTCTGCTTaGGGTACCCTGGCGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LCSYRACAQGGHRHLASTLRSSA*GTLASE Trigger: CTCACTCGCCAGGGTACCCAAAGCAGAGGACCTCAG...CGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 90 bp | AAGCCTTGGATGGCTTTCTTCAGCTCCCTTCGAGCCAGACCCAGCTaGCTGGCCTGCCACTCACACCTGTCCCGCAGTCGCTGGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KPWMAFFSSLRARPS*LACHSHLSRSRWAS Trigger: GCTGGCCCAGCGACTGCGGGACAGGTGTGAGTGGCAGGCCAGGCAGCTGGGTCTGGCTCGAAGGGAGCTGAAGAAAGCCATCCAAGGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | GGCCACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTACGGATGCTGTTTCCCTaGCCATCCTACCTACACCGG | + |
|
Preference number: 5 (lower is better) Translates to: GHRHLASTPSDGQKPELLRMLFP*PSYLHR Trigger: CCGGTGTAGGTAGGATGGCAAGGGAAACAGCATCCG...TAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | CACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGGCATGAGGATGGGCTaGGCCTCTGCCCTTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRHLASTPSDGQKPELLWGMRMG*ASALSS Trigger: GGAAGAAAGGGCAGAGGCCAAGCCCATCCTCATGCC...CCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS TCA 90 bp | CCTGCTTCAGAGGAGCCTGCTCTTCATTGCCAAAGGTTGAGCGGGTaGCCGGCCTGCTCTGCTCCGGCTGCACGCTGTCCAGGGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PASEEPALHCQRLSG*PACSAPAARCPGIG Trigger: GCCAATCCCTGGACAGCGTGCAGCCGGAGCAGAGCAGGCCGGTCACCCGCTCAACCTTTGGCAATGAAGAGCAGGCTCCTCTGAAGCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 90 bp | GCCGCCCGGCCGGCTCCCTTGGGTGTGTCCTTAGAAGGCAGAGCCTaGTTCAGAGGAGCCTGCTCTTCATTGCCAAAGGTTGAGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AARPAPLGVSLEGRA*FRGACSSLPKVERV Trigger: CACCCGCTCAACCTTTGGCAATGAAGAGCAGGCTCCTCTGAAGCAGGCTCTGCCTTCTAAGGACACACCCAAGGGAGCCGGCCGGGCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | GCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCACAGCTGAGCAGCTGCTaGCTCTCTTCAGCTCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: AHCAATEHAHKVATGTWPQLSSC*LSSALR Trigger: ACGAAGAGCTGAAGAGAGCAAGCAGCTGCTCAGCTG...TGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | GGAGGGGAGGGCGCAGTTCCCCAGCCTGGGAAGGGAGACAGACTCGGGTTTCCAGATGGGCTGGACCCCTaGGCTTCTGAGGTAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGEGAVPQPGKGDRLGFPDGLDP*ASEVDG Trigger: ACCATCTACCTCAGAAGCCAAGGGGTCCAGCCCATC...TGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTGGGGAACTGCGCCCTCCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | CTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGTTGGGCCTCACGTGTTaGGGTTTGGGCATGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LCSYRACAQGGHRHLASTLGLTC*GLGMRM Trigger: CATCCTCATGCCCAAACCCAAACACGTGAGGCCCAA...CGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | GGAGGGGAGGGCGCAGTTCCCCAGCCTGGGAAGGGAGACAGACTCGGGTTTCCAATGGGAGACGGGACATaGCACCCAATCCCAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGEGAVPQPGKGDRLGFPMGDGT*HPIPAE Trigger: CTCAGCTGGGATTGGGTGCAATGTCCCGTCTCCCAT...TGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTGGGGAACTGCGCCCTCCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | CGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGGCCCGGCCGGCTCCCTaGGGTGTGTCCTTAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RCLRCIVQLPSMRTVQLPARPAP*GVSLEG Trigger: GCCTTCTAAGGACACACCCAAGGGAGCCGGCCGGGC...CGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | GCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACGCCCTTGGTCGATCCTCGCTTaGAGGTCTTCATTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AATEHAHKVATGTWPARPWSILA*RSSFCC Trigger: GCAGCAGAATGAAGACCTCAAAGCGAGGATCGACCA...AGGGCGTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR CAA 90 bp | GGTGGCCACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCTGGTCGATCCTCGCTTaGAGGTCTTCATTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGHRHLASTPSDGQKPELWSILA*RSSFCC Trigger: GCAGCAGAATGAAGACCTCAAAGCGAGGATCGACCA...GAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGTGGCCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS TCA 90 bp | CCTGCCTCTCCAGCGGGAGCGGCGCTCAGTGTAGGGGTGGCTTGCTaGGACCCCTCCACACCAGCACTGACTCCAGTCATTTCTTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PASPAGAALSVGVAC*DPSTPALTPVISSR Trigger: CCTAGAAGAAATGACTGGAGTCAGTGCTGGTGTGGAGGGGTCTCAGCAAGCCACCCCTACACTGAGCGCCGCTCCCGCTGGAGAGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | CACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCATCCAGCTGGAAAGACTaGGTCCCTGAACACACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HCAATEHAHKVATGTWPASSWKD*VPEHTG Trigger: CCCAGTGTGTTCAGGGACCAAGTCTTTCCAGCTGGA...TGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | TGCAGGCCAGCAGGACCTCCTGACTCCATGAAGAACAGAGCTGTTTGGCAGGTCACTGGCTGGTGTCCTTaGTGGCCCCTCCCCACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CRPAGPPDSMKNRAVWQVTGWCP*WPLPTR Trigger: GCGCGTGGGGAGGGGCCACAAAGGACACCAGCCAGT...GACCTGCCAAACAGCTCTGTTCTTCATGGAGTCAGGAGGTCCTGCTGGCCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS TCA 90 bp | CTGCACTGGCTGCAGGTCCGTGGGAGGGACGCTGCCAGCTGCAGCTaGGCAGCTGCTTGCTCTCTTCAGCTCTTCGTTGTCAAGGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LHWLQVRGRDAASCS*AAACSLQLFVVKGL Trigger: AAGACCCTTGACAACGAAGAGCTGAAGAGAGCAAGCAGCTGCTCAGCTGCAGCTGGCAGCGTCCCTCCCACGGACCTGCAGCCAGTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | CTGCAGAGATGCTGGAGCTCCTCACGAAGCCGAAGGCCGCCAGCTTaGCTGCAGGGAGTCGTGAATAGCCAGGAGGACGAAGCCCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: LQRCWSSSRSRRPPA*LQGVVNSQEDEAQI Trigger: AATCTGGGCTTCGTCCTCCTGGCTATTCACGACTCCCTGCAGCCAAGCTGGCGGCCTTCGGCTTCGTGAGGAGCTCCAGCATCTCTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | CAGCACCTGCTTCAGGCTCTGCATGTCTTCTTCCAGGTGCTGGTATaGAGCCAGCGCAATCTGTGCAGGAGCGGGTGCCAGCACCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: QHLLQALHVFFQVLV*SQRNLCRSGCQHLR Trigger: TCGGAGGTGCTGGCACCCGCTCCTGCACAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152105.8 |
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| CDS-3UTR CAA 90 bp | ACCGGCACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGGTGAAGGGGCTCCTTTaGGAAGTGGCTGTGGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: TGTWPARPQMGRSLSSYGVKGLL*EVAVVL Trigger: CAATACCACAGCCACTTCCAAAAGGAGCCCCTTCAC...CCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTGCCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | GAGGAGCTGAGGTCCTCTGCTTTGGGTACCCTGGCGAGTGAGGTTTaGTGGCAGCAGAAGCTGTCCTCTTGGGAGACGAAACAGCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EELRSSALGTLASEV*WQQKLSSWETKQRA Trigger: AGCCCGCTGTTTCGTCTCCCAAGAGGACAGCTTCTGCTGCCACCAAACCTCACTCGCCAGGGTACCCAAAGCAGAGGACCTCAGCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | CAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGGAGGAGGGCGTGTCCTaGGGGTGTGTAGGAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSERTLPKMHCAATEHAEEGVS*GCVGGL Trigger: CAAGCCTCCTACACACCCCAAGGACACGCCCTCCTC...CGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | AGTCCAGTGGCTGATGGATGCCGGCTGGCCGTTTCACTGCGTTCCCTTGTCTGGCAGGGCGTCGAAGCCTaGGATGGCTTTCTTCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPVADGCRLAVSLRSLVWQGVEA*DGFLQL Trigger: GAGCTGAAGAAAGCCATCCAAGGCTTCGACGCCCTG...CCAGACAAGGGAACGCAGTGAAACGGCCAGCCGGCATCCATCAGCCACTGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 90 bp | TTCATCTCCAGCACCTGCTTCAGGCTCTGCATGTCTTCTTCCAGGTaGTGGTATGGAGCCAGCGCAATCTGTGCAGGAGCGGGTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FISSTCFRLCMSSSR*WYGASAICAGAGAS Trigger: GCTGGCACCCGCTCCTGCACAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGTGCTGGAGATGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152105.8 |
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| CDS-3UTR CAA 90 bp | TTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTTGTGGCCCTTCCATCTaGGTGTCTGATGGGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LCSYRACALCSYRACAQGCGPSI*VSDGLD Trigger: GTCCAGCCCATCAGACACCAAGATGGAAGGGCCACA...ACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | AGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGTGACTGCTATTCCCTaGACTTGTGGCTTCTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SMRTVQLPSMRTRWPPAPVTAIP*TCGFSV Trigger: TACCGAGAAGCCACAAGTCAAGGGAATAGCAGTCAC...AGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | GACATCACAAGAATGCAGTCCCAGCCCAAGGCAACTGAGTTGCTGCAGGCCAGCGCGAACAGGAGCTGCTaGTCCGACATCAGGCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DITRMQSQPKATELLQASANRSC*SDIRRS Trigger: ACTGCGCCTGATGTCGGACAAGCAGCTCCTGTTCGC...GCTGGCCTGCAGCAACTCAGTTGCCTTGGGCTGGGACTGCATTCTTGTGATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | CACCTGGCCAGCACGCCCTCAGATGGGCAGAAGCCTGAGCTCCTATGGGTGGCAGAAACAGCGGGCTTTTaGGCTTCTGGATCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLASTPSDGQKPELLWVAETAGF*ASGSFC Trigger: GCAGAAAGATCCAGAAGCCAAAAAGCCCGCTGTTTC...TGCCACCCATAGGAGCTCAGGCTTCTGCCCATCTGAGGGCGTGCTGGCCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | GAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCCGTATTCCTGGAGGTTaGCATTTTCCTCCGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: EHAHCAATEHAHKVATGTRIPGG*HFPPTV Trigger: AACTGTCGGAGGAAAATGCAAACCTCCAGGAATACG...GGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CAA 90 bp | GAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCCAAAGTAGTTCTTCGTaGGTTCGGCTCAGTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EHAHCAATEHAHKVATGTQSSSS*VRLSLF Trigger: GAAGAGACTGAGCCGAACCAACGAAGAACTACTTTG...GGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR CAA 90 bp | ACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCACCAAAGTAGTTCTTCGTaGGTTCGGCTCAGTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVQLPSMRTRWPPAPGQHQSSSS*VRLSLF Trigger: GAAGAGACTGAGCCGAACCAACGAAGAACTACTTTG...GTGCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS TCA 90 bp | TTCCCAGGGTGGTCTGCGACCTCCTGCAGGAACTTCTCGCTCATCTaGCTGAAATGGTGCGCTGGGGGCTTGATCCCAGACACCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FPGWSATSCRNFSLI*LKWCAGGLIPDTIS Trigger: ACTGATGGTGTCTGGGATCAAGCCCCCAGCGCACCATTTCAGTCAGATGAGCGAGAAGTTCCTGCAGGAGGTCGCAGACCACCCTGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | CCCTGTGTCCCCACTGAACACACCGAGCTCCTGAGAACTGCTACCTaGGGGAGTCGGATGATGACTCGAGTTCACAGTTGTCTCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PCVPTEHTELLRTAT*GSRMMTRVHSCLWV Trigger: CACCCAGAGACAACTGTGAACTCGAGTCATCATCCGACTCCCCCAGGTAGCAGTTCTCAGGAGCTCGGTGTGTTCAGTGGGGACACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | GACCTCCTGCAGGAACTTCTCGCTCATCTGACTGAAATGGTGCGCTaGGGGCTTGATCCCAGACACCATCAGTCCAGAAGGGAAGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: DLLQELLAHLTEMVR*GLDPRHHQSRREDP Trigger: CGGGTCTTCCCTTCTGGACTGATGGTGTCTGGGATCAAGCCCCCAGCGCACCATTTCAGTCAGATGAGCGAGAAGTTCCTGCAGGAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | TGGCACTCGCTGAGGACCTCTGGCTTGCGATCAGAATCCTGCTCTTaGTTGATGGGAGACGGGACATTGCACCCAATCCCAGCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WHSLRTSGLRSESCS*LMGDGTLHPIPAEA Trigger: AGCCTCAGCTGGGATTGGGTGCAATGTCCCGTCTCCCATCAACCAAGAGCAGGATTCTGATCGCAAGCCAGAGGTCCTCAGCGAGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | GTTGTTAGTGATCCGGGCGGATGGATGGCACTCGCTGAGGACCTCTaGCTTGCGATCAGAATCCTGCTCTTGGTTGATGGGAGACGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VVSDPGGWMALAEDL*LAIRILLLVDGRRD Trigger: GTCCCGTCTCCCATCAACCAAGAGCAGGATTCTGATCGCAAGCCAGAGGTCCTCAGCGAGTGCCATCCATCCGCCCGGATCACTAACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | TTGATTTTGGTGCTGGAAGTAAACTCCTGCGTGGTGTTGTTGCATTaGAGGAAGACGCAGGAGCCGCCCGGCCGGCTCCCTTGGGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LILVLEVNSCVVLLH*RKTQEPPGRLPWVC Trigger: ACACACCCAAGGGAGCCGGCCGGGCGGCTCCTGCGTCTTCCTCCAATGCAACAACACCACGCAGGAGTTTACTTCCAGCACCAAAATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | GAGCTGAGGTCCTCTGCTTTGGGTACCCTGGCGAGTGAGGTTTGGTaGCAGCAGAAGCTGTCCTCTTGGGAGACGAAACAGCGGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ELRSSALGTLASEVW*QQKLSSWETKQRAF Trigger: AAAAGCCCGCTGTTTCGTCTCCCAAGAGGACAGCTTCTGCTGCCACCAAACCTCACTCGCCAGGGTACCCAAAGCAGAGGACCTCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | AGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTGGAGCCTGCTCTTCATaGCCAAAGGTTGAGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTLPKMHCAATEHAHCAAGACSS*PKVERV Trigger: CACCCGCTCAACCTTTGGCAATGAAGAGCAGGCTCC...AGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | GCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGCACCTGGCCAGCAGTAGACATCAGTTCTaGGACTTTGTGATCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ALCSYRACAQGGHRHLASSRHQF*DFVIMV Trigger: GACCATGATCACAAAGTCCAAGAACTGATGTCTACT...GCTGGCCAGGTGCCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS GCA 90 bp | GGGCCTCACGTGTTTGGGTTTGGGCATGAGGATGGGCTTGGCCTCTaGCCTTTCTTCCATTTTCTCCGTCTCCAGTTTCTCCCGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GPHVFGFGHEDGLGL*PFFHFLRLQFLPSF Trigger: GAAGCTCGGGAGAAACTGGAGACGGAGAAAATGGAAGAAAGGGCAGAGGCCAAGCCCATCCTCATGCCCAAACCCAAACACGTGAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 90 bp | GACCCGTGGCTTCTGCAAGTCGGGCTTCAGTTTCTCGTACATGTTTaGAGACGGTTGAAGGTCACGGCTCGCTGCCTTCTCTTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DPWLLQVGLQFLVHV*RRLKVTARCLLFLG Trigger: CCCCAAGAAGAGAAGGCAGCGAGCCGTGACCTTCAACCGTCTGCAAACATGTACGAGAAACTGAAGCCCGACTTGCAGAAGCCACGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS GCA 90 bp | GATGGATGGCACTCGCTGAGGACCTCTGGCTTGCGATCAGAATCCTaGTCTTGGTTGATGGGAGACGGGACATTGCACCCAATCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DGWHSLRTSGLRSES*SWLMGDGTLHPIPA Trigger: AGCTGGGATTGGGTGCAATGTCCCGTCTCCCATCAACCAAGAGCAGGATTCTGATCGCAAGCCAGAGGTCCTCAGCGAGTGCCATCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | GCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCTGTTGGCAAGTTCGATaGACAGCTCCTTTTCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ATEHAHCAATEHAHKVATCWQVR*TAPFLS Trigger: CGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAACA...GGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CAA 90 bp | GCACAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGACTCGAGTTCACAGTaGTCTCTGGGTGGAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AQGSERTLPKMHCAATEHDSSSQ*SLGGGG Trigger: CCCTCCTCCACCCAGAGACAACTGTGAACTCGAGTC...ATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | CAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCTCACGTGTTTGGGTTaGGGCATGAGGATGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSERTLPKMHCAATEHALTCLG*GMRMGL Trigger: CAAGCCCATCCTCATGCCCAAACCCAAACACGTGAG...CGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | GACATCACAAGAATGCAGTCCCAGCCCAAGGCAACTGAGTTGCTGCAGGCCAGCCTGAGGACCTCTGGCTaGCGATCAGAATCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DITRMQSQPKATELLQASLRTSG*RSESCS Trigger: AGAGCAGGATTCTGATCGCAAGCCAGAGGTCCTCAG...GCTGGCCTGCAGCAACTCAGTTGCCTTGGGCTGGGACTGCATTCTTGTGATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCCCAAACCCATCCAGACATCACAAGAATGCAGTCCCAGCCCAAGGCAAGCCTGCAGGTCAGGCTaGGGTGGGAACTCATTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSPKPIQTSQECSPSPRQACRSG*GGNSFR Trigger: TCGAAATGAGTTCCCACCCAAGCCTGACCTGCAGGC...TTGCCTTGGGCTGGGACTGCATTCTTGTGATGTCTGGATGGGTTTGGGGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | ATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGTCGATCCTCGCTTaGAGGTCTTCATTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IVQLPSMRTVQLPSMRTRWSILA*RSSFCC Trigger: GCAGCAGAATGAAGACCTCAAAGCGAGGATCGACCA...CCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS TCA 90 bp | TCATTTCGAGGAGCTGAGGTCCTCTGCTTTGGGTACCCTGGCGAGTaGGGTTTGGTGGCAGCAGAAGCTGTCCTCTTGGGAGACGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: SFRGAEVLCFGYPGE*GLVAAEAVLLGDET Trigger: TGTTTCGTCTCCCAAGAGGACAGCTTCTGCTGCCACCAAACCTCACTCGCCAGGGTACCCAAAGCAGAGGACCTCAGCTCCTCGAAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 90 bp | CAGTTTCTCGTACATGTTTGCAGACGGTTGAAGGTCACGGCTCGCTaGCTTCTCTTCTTGGGGAAGAGGCATGCCACATGTAGGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QFLVHVCRRLKVTAR*LLFLGKRHATCRRG Trigger: GCCCCTCCTACATGTGGCATGCCTCTTCCCCAAGAAGAGAAGGCAGCGAGCCGTGACCTTCAACCGTCTGCAAACATGTACGAGAAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 90 bp | AACCGTAGAAACTGGCAGCTGTTGTTAGTGATCCGGGCGGATGGATaGCACTCGCTGAGGACCTCTGGCTTGCGATCAGAATCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NRRNWQLLLVIRADG*HSLRTSGLRSESCS Trigger: AGAGCAGGATTCTGATCGCAAGCCAGAGGTCCTCAGCGAGTGCCATCCATCCGCCCGGATCACTAACAACAGCTGCCAGTTTCTACGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | GACATCACAAGAATGCAGTCCCAGCCCAAGGCAACTGAGTTGCTGCAGGCCAGCCGGGGTTGGACAGATTaGAGCTCCACTTTGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: DITRMQSQPKATELLQASRGWTD*SSTLDF Trigger: GAAGTCCAAAGTGGAGCTCAAATCTGTCCAACCCCG...GCTGGCCTGCAGCAACTCAGTTGCCTTGGGCTGGGACTGCATTCTTGTGATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | CGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGCTGGCCTTTGCAGCATaGGAATTGGAGGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RCLRCIVQLPSMRTVQLPLAFAA*ELEAFL Trigger: CAAGAAAGCCTCCAATTCCAATGCTGCAAAGGCCAG...CGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | TACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTGGCCACCGGAGTAGACATCAGTTCTaGGACTTTGTGATCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YRACALCSYRACAQGGHRSRHQF*DFVIMV Trigger: GACCATGATCACAAAGTCCAAGAACTGATGTCTACT...CCGGTGGCCACCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR CAA 90 bp | CAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGTGGTCGATCCTCGCTTaGAGGTCTTCATTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QGSERTLPKMHCAATEHAWSILA*RSSFCC Trigger: GCAGCAGAATGAAGACCTCAAAGCGAGGATCGACCA...CGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS GCA 90 bp | AGGTGGATCTGCTGGTTCTTCATCTCCAGCACCTGCTTCAGGCTCTaGATGTCTTCTTCCAGGTGCTGGTATGGAGCCAGCGCAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RWICWFFISSTCFRL*MSSSRCWYGASAIL Trigger: CAAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGTGCTGGAGATGAAGAACCAGCAGATCCACCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
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| CDS GCA 90 bp | GTGGGTGTAGGGAGGAGAGCAAAATTCTTCCTTCCCAGGGTGGTCTaGGACCTCCTGCAGGAACTTCTCGCTCATCTGACTGAAATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGVGRRAKFFLPRVV*DLLQELLAHLTEMV Trigger: CACCATTTCAGTCAGATGAGCGAGAAGTTCCTGCAGGAGGTCGCAGACCACCCTGGGAAGGAAGAATTTTGCTCTCCTCCCTACACCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 90 bp | TTCATCTCCAGCACCTGCTTCAGGCTCTGCATGTCTTCTTCCAGGTaGTGGTATGGAGCCAGCGCAATGTGTCTCGCCCATGTCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: FISSTCFRLCMSSSR*WYGASAMCLAHVLK Trigger: CTTAAGGACATGGGCGAGACACATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGTGCTGGAGATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085554.5 |
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| CDS GCA 90 bp | AGGTGGATCTGCTGGTTCTTCATCTCCAGCACCTGCTTCAGGCTCTaGATGTCTTCTTCCAGGTGCTGGTATGGAGCCAGCGCAATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RWICWFFISSTCFRL*MSSSRCWYGASAMC Trigger: ACACATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGTGCTGGAGATGAAGAACCAGCAGATCCACCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085554.5 |
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| CDS GCA 90 bp | AGGTGGATCTGCTGGTTCTTCATCTCCAGCACCTGCTTCAGGCTCTaGATGTCTTCTTCCAGGTGCTGGTATGGAGCCAGCGCAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RWICWFFISSTCFRL*MSSSRCWYGASAIC Trigger: ACAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGTGCTGGAGATGAAGAACCAGCAGATCCACCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110514.8 ENSMUST00000152105.8 |
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| CDS CCA 90 bp | TTTCCAAAGAAATGCTTAGTAGAGACAGCCAGGGCGTCGAAGCCTTaGATGGCTTTCTTCAGCTCCCTTCGAGCCAGACCCAGCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPKKCLVETARASKP*MAFFSSLRARPSCL Trigger: CAGGCAGCTGGGTCTGGCTCGAAGGGAGCTGAAGAAAGCCATCCAAGGCTTCGACGCCCTGGCTGTCTCTACTAAGCATTTCTTTGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | CGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGACTTCATCCCTGATGTaGGCAAGTTCGATTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCLRCIVQLPSMRTVQLPTSSLM*ASSIDS Trigger: GCTGTCAATCGAACTTGCCAACATCAGGGATGAAGT...CGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS-3UTR CAA 90 bp | CAGCCTGGGAAGGGAGACAGACTCGGGTTTCCATGCCGAGAGGTCCGGATCATACAAAACAGGATTTCTTaGGAGCGAGTGGGACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: QPGKGDRLGFPCREVRIIQNRIS*ERVGHS Trigger: TGAGTGTCCCACTCGCTCCAAAGAAATCCTGTTTTG...TATGATCCGGACCTCTCGGCATGGAAACCCGAGTCTGTCTCCCTTCCCAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | TACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTCATGTTTGCAGACGGTaGAAGGTCACGGCTCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YQDGLAQGSERTLPKMHCHVCRR*KVTARC Trigger: GCAGCGAGCCGTGACCTTCAACCGTCTGCAAACATG...ACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | CACAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGGAATCCTGCTCTTGGTaGATGGGAGACGGGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: HKGQRGRCLRCIVQLPSMESCSW*MGDGTL Trigger: CAATGTCCCGTCTCCCATCAACCAAGAGCAGGATTC...CATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS-3UTR CAA 90 bp | AGAAGCTGTCACCATGCCCAGGCCATTTCTGCTTGGCTCCATTGCTCTTGTCATCGTGGTGTTGTTGCATaGGAGGAAGACGCAGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSCHHAQAISAWLHCSCHRGVVA*EEDAGA Trigger: GGCTCCTGCGTCTTCCTCCAATGCAACAACACCACG...ATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGACAGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS TCA 90 bp | TTCTGCAAGTCGGGCTTCAGTTTCTCGTACATGTTTGCAGACGGTTaGAGGTCACGGCTCGCTGCCTTCTCTTCTTGGGGAAGAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: FCKSGFSFSYMFADG*RSRLAAFSSWGRGM Trigger: CATGCCTCTTCCCCAAGAAGAGAAGGCAGCGAGCCGTGACCTTCAACCGTCTGCAAACATGTACGAGAAACTGAAGCCCGACTTGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS GCA 90 bp | TTCATCTCCAGCACCTGCTTCAGGCTCTGCATGTCTTCTTCCAGGTaGTGGTATGGAGCCAGCGCAATCTGTAATGTCAGCCGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FISSTCFRLCMSSSR*WYGASAICNVSRSF Trigger: AAAGCTGCGGCTGACATTACAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGTGCTGGAGATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110514.8 |
||
| CDS CCA 90 bp | GGGAATGTGCCTGGGAATCTCAGCATCCTTTTTAGCGGAAGCCTCTaGACTGGCTTGACCTACTGCATTCCTCCAGCTGGAAAGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GNVPGNLSILFSGSL*TGLTYCIPPAGKTW Trigger: CCAAGTCTTTCCAGCTGGAGGAATGCAGTAGGTCAAGCCAGTCCAGAGGCTTCCGCTAAAAAGGATGCTGAGATTCCCAGGCACATTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 90 bp | CTCTTCGTACTCCAAGCTGGCGGTGACTGCTATTCCCTTGACTTGTaGCTTCTCGGTATGCCTTCTCAAGTAGCTCCTGCCTCTCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LFVLQAGGDCYSLDL*LLGMPSQVAPASLQ Trigger: CTGTAGAGAGGCAGGAGCTACTTGAGAAGGCATACCGAGAAGCCACAAGTCAAGGGAATAGCAGTCACCGCCAGCTTGGAGTACGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | ATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGAGCATGCGCACAAGGTCAGCTACCATCTCTTaGCCTTTTCTGGCTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: IVQLPSMRTVQLPSMRTRSATIS*PFLASK Trigger: TTTGGAAGCCAGAAAAGGCAAAGAGATGGTAGCTGA...CCTTGTGCGCATGCTCGGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | ACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCACTGTGCAGCTACCGCGTGGAAGTTGATTTaGGTGCTGGAAGTAAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLPKMHCAATEHAHCAATAWKLI*VLEVNS Trigger: GGAGTTTACTTCCAGCACCAAAATCAACTTCCACGC...GGTAGCTGCACAGTGCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS GCA 90 bp | TTCATCTCCAGCACCTGCTTCAGGCTCTGCATGTCTTCTTCCAGGTaGTGGTATGGAGCCAGCGCAATCTTGGACTTTGTGATCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FISSTCFRLCMSSSR*WYGASAILDFVIMV Trigger: GACCATGATCACAAAGTCCAAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGTGCTGGAGATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| CDS-3UTR CAA 90 bp | CAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGTGTTGGCAAGTTCGATaGACAGCTCCTTTTCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QGSERTLPKMHCAATEHACWQVR*TAPFLS Trigger: CGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAACA...CGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATGCGCTGTTGGCAAGTTCGATaGACAGCTCCTTTTCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: KGQRGRCLRCIVQLPSMRCWQVR*TAPFLS Trigger: CGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAACA...GCGCATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CAA 90 bp | AGCACAGTTAACCGGAGGGGCAGGACAAAGAACACTGTGCCCCCTTCAGCTAATCTCTTCAGCTCTTCGTaGTCAAGGGTCTTCGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: STVNRRGRTKNTVPPSANLFSSS*SRVFAN Trigger: ATTGGCGAAGACCCTTGACAACGAAGAGCTGAAGAG...ATTAGCTGAAGGGGGCACAGTGTTCTTTGTCCTGCCCCTCCGGTTAACTGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | ATGGAGAAACGAAGCCAGGGCCATGGGGAGATTTATTCAAGTGCCCAGGGTCGATTGGTAGACTGGCCTTaGCAGCATTGGAATTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MEKRSQGHGEIYSSAQGRLVDWP*QHWNWR Trigger: CCTCCAATTCCAATGCTGCAAAGGCCAGTCTACCAA...TCGACCCTGGGCACTTGAATAAATCTCCCCATGGCCCTGGCTTCGTTTCTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | GCACAAGGGTCAGAGAGGACGCTGCCTAAGATGCATTGTGCAGCTACCGAGCATCAAAGTAGTTCTTCGTaGGTTCGGCTCAGTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AQGSERTLPKMHCAATEHQSSSS*VRLSLF Trigger: GAAGAGACTGAGCCGAACCAACGAAGAACTACTTTG...ATGCTCGGTAGCTGCACAATGCATCTTAGGCAGCGTCCTCTCTGACCCTTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS TCA 90 bp | TTTCCTTCGACGCTGAAGCTGAACTGGGAGTCAATTCTGCATGAGTaGTGCGCTCGTTGTAAACATCCAGGCCATGTGGCCCTTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FPSTLKLNWESILHE*CARCKHPGHVALPS Trigger: AGATGGAAGGGCCACATGGCCTGGATGTTTACAACGAGCGCATCACTCATGCAGAATTGACTCCCAGTTCAGCTTCAGCGTCGAAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | AGCGCCAATACCAGGATGGTCTTGCACAAGGGTCAGAGAGGACGCTGCCTAAGATGTTGGCAAGTTCGATaGACAGCTCCTTTTCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SANTRMVLHKGQRGRCLRCWQVR*TAPFLS Trigger: CGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAACA...TCTTAGGCAGCGTCCTCTCTGACCCTTGTGCAAGACCATCCTGGTATTGGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CAA 90 bp | TTGACTGGAACCCCTGAGCCATCTTGTTGTGTGGTGATGGGGTCGAGTCATAGATGCTATTCCCTTGACTaGTGGCTTCTCGGTATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTGTPEPSCCVVMGSSHRCYSLD*WLLGMP Trigger: AGGCATACCGAGAAGCCACAAGTCAAGGGAATAGCA...TCTATGACTCGACCCCATCACCACACAACAAGATGGCTCAGGGGTTCCAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTGGAGTTGTTTCTCTTTTGTGGTGCGCTGGGGGCTaGATCCCAGACACCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSAMEVRRSRTIGVVSLLWCAGG*IPDTIS Trigger: ACTGATGGTGTCTGGGATCAAGCCCCCAGCGCACCA...CAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | GTCACCATGCCCAGGCCATTTCTGCTTGGCTCCATTGCTCTTGTCATCTTGGGCTTTGCAGCATTGGAATaGGAGGCTTTCTTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTMPRPFLLGSIALVILGFAALE*EAFLRS Trigger: AGACCTCAAGAAAGCCTCCAATTCCAATGCTGCAAA...GCCCAAGATGACAAGAGCAATGGAGCCAAGCAGAAATGGCCTGGGCATGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS GCA 90 bp | AGCTCCTTTTCTTTCGCAAGGGCTCTTTCGCTCTTTCCAAAGAAATaGTTAGTAGAGACAGCCAGGGCGTCGAAGCCTTGGATGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSFSFARALSLFPKK*LVETARASKPWMAF Trigger: GAAAGCCATCCAAGGCTTCGACGCCCTGGCTGTCTCTACTAAGCATTTCTTTGGAAAGAGCGAAAGAGCCCTTGCGAAAGAAAAGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 90 bp | AGAAGCTGTCCTCTTGGGAGACGAAACAGCGGGCTTTTTGGCTTCTaGATCTTTCTGCAATTCTTTCTTTGCTCCAGCTGGCGTGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSCPLGRRNSGLFGF*IFLQFFLCSSWRGS Trigger: ACTTCCACGCCAGCTGGAGCAAAGAAAGAATTGCAGAAAGATCCAGAAGCCAAAAAGCCCGCTGTTTCGTCTCCCAAGAGGACAGCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS TCA 90 bp | GGCGGTGTTGAAGGCAACTTCATCCCTGATGTTGGCAAGTTCGATTaGCAGCTCCTTTTCTTTCGCAAGGGCTCTTTCGCTCGTTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: GGVEGNFIPDVGKFD*QLLFFRKGSFARFI Trigger: GATAAAACGAGCGAAAGAGCCCTTGCGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAACATCAGGGATGAAGTTGCCTTCAACACCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071878.12 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS TCA 90 bp | GGCGGTGTTGAAGGCAACTTCATCCCTGATGTTGGCAAGTTCGATTaGCAGCTCCTTTTCTTTCGCAAGGGCTCTTTCGCTCTTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GGVEGNFIPDVGKFD*QLLFFRKGSFALSK Trigger: TTTGGAAAGAGCGAAAGAGCCCTTGCGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAACATCAGGGATGAAGTTGCCTTCAACACCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 90 bp | TGGCTTCTGGATCTTTCTGCAATTCTTTCTTTGCTCCAGCTGGCGTaGAAGTTGATTTTGGTGCTGGAAGTAAACTCCTGCGTGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WLLDLSAILSLLQLA*KLILVLEVNSCVVL Trigger: CAACACCACGCAGGAGTTTACTTCCAGCACCAAAATCAACTTCCACGCCAGCTGGAGCAAAGAAAGAATTGCAGAAAGATCCAGAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | ACAGTTGTATACCCACACATCTGGATATACACATGCGGCGGTTGGTACAAGGAGCGTATTCCTGGAGGTTaGCATTTTCCTCCGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TVVYPHIWIYTCGGWYKERIPGG*HFPPTV Trigger: AACTGTCGGAGGAAAATGCAAACCTCCAGGAATACG...CTCCTTGTACCAACCGCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS CCA 90 bp | TTTCTAGAAGGTTCCTATTTTCAGCTACCATCTCTTTGCCTTTTCTaGCTTCCAAATTGCTACCTCGAGGGCTCAAGAGCCCAGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLEGSYFQLPSLCLF*LPNCYLEGSRAQRC Trigger: ACACCTCTGGGCTCTTGAGCCCTCGAGGTAGCAATTTGGAAGCCAGAAAAGGCAAAGAGATGGTAGCTGAAAATAGGAACCTTCTAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | GTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTGGAGTTGTTTCTCTTTTGCCAAAGTAGTTCTTCGTaGGTTCGGCTCAGTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLPWKFVAQGQLELFLFCQSSSS*VRLSLF Trigger: GAAGAGACTGAGCCGAACCAACGAAGAACTACTTTG...GCAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS TCA 90 bp | CGTGACTTGGCCTCATCGCAAGAGGAGCTGACCTCCAACATGATTTaGTTGGCATTTGTATCTCCCGTCCTCAGAATACTCTCATTATTA | + |
|
Preference number: 5 (lower is better) Translates to: RDLASSQEELTSNMI*LAFVSPVLRILSLL Trigger: TAATAATGAGAGTATTCTGAGGACGGGAGATACAAATGCCAATCAAATCATGTTGGAGGTCAGCTCCTCTTGCGATGAGGCCAAGTCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS TCA 90 bp | ATTTTGGTAGACTGGCCTTTGCAGCATTGGAATTGGAGGCTTTCTTaGGGTCTGAAGGATCAGAACCGTAGAAACTGGCAGCTGTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ILVDWPLQHWNWRLS*GLKDQNRRNWQLLL Trigger: TAACAACAGCTGCCAGTTTCTACGGTTCTGATCCTTCAGACCTCAAGAAAGCCTCCAATTCCAATGCTGCAAAGGCCAGTCTACCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | CAATTCGGAATCGCCACAGTTGTATACCCACACATCTGGATATACACATGCGGCTCTCATTATTATTTTTaGCCCCCTCTCGGTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: QFGIATVVYPHIWIYTCGSHYYF*PPLGDL Trigger: GAGATCACCGAGAGGGGGCAAAAAATAATAATGAGA...GCCGCATGTGTATATCCAGATGTGTGGGTATACAACTGTGGCGATTCCGAATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | GTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTGGAGTTGTTTCTCTTTTGCGACCTCCAACATGATTaGATTGGCATTTGTATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLPWKFVAQGQLELFLFCDLQHD*IGICIS Trigger: GGAGATACAAATGCCAATCAAATCATGTTGGAGGTC...GCAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGCCATGGAAGTTCGTCGCTCAAGGACAATTGGAGTTGTTTCTCTTTTGAGTAGACATCAGTTCTaGGACTTTGTGATCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSAMEVRRSRTIGVVSLLSRHQF*DFVIMV Trigger: GACCATGATCACAAAGTCCAAGAACTGATGTCTACT...CAAAAGAGAAACAACTCCAATTGTCCTTGAGCGACGAACTTCCATGGCAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
||
| CDS-3UTR CAA 90 bp | GCACAAGTTAGAAAACTGCTGACCTTCACTAAAATATGTCAGCGTATCGCGTTACGTATTCCTGGAGGTTaGCATTTTCCTCCGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AQVRKLLTFTKICQRIALRIPGG*HFPPTV Trigger: AACTGTCGGAGGAAAATGCAAACCTCCAGGAATACG...TAACGCGATACGCTGACATATTTTAGTGAAGGTCAGCAGTTTTCTAACTTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000085554.5 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS TCA 72 bp | CCGAGTTCCCGCTACCCAGCCTCCGCTCCTCCCCACTaGCCTCGGAGGGCACGCTCTCGGTTGGATCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSSRYPASAPPH*PRRARSRLDHG Trigger: GCCGTGATCCAACCGAGAGCGTGCCCTCCGAGGTCAGTGGGGAGGAGCGGAGGCTGGGTAGCGGGAACTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 72 bp | TGGTCCTGCGGCCCCAAGGTATCCAGCTGCACTGGCTaGAGGTCCGTGGGAGGGACGCTGCCAGCTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WSCGPKVSSCTG*RSVGGTLPAAA Trigger: AGCTGCAGCTGGCAGCGTCCCTCCCACGGACCTGCAGCCAGTGCAGCTGGATACCTTGGGGCCGCAGGACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 72 bp | GCAGGCACATGGTCCTGCGGCCCCAAGGTATCCAGCTaGACTGGCTGCAGGTCCGTGGGAGGGACGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGTWSCGPKVSS*TGCRSVGGTLP Trigger: TGGCAGCGTCCCTCCCACGGACCTGCAGCCAGTGCAGCTGGATACCTTGGGGCCGCAGGACCATGTGCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 72 bp | GCCCCAAGGTATCCAGCTGCACTGGCTGCAGGTCCGTaGGAGGGACGCTGCCAGCTGCAGCTGAGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: APRYPAALAAGP*EGRCQLQLSSC Trigger: GCAGCTGCTCAGCTGCAGCTGGCAGCGTCCCTCCCACGGACCTGCAGCCAGTGCAGCTGGATACCTTGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 72 bp | CACATGGTCCTGCGGCCCCAAGGTATCCAGCTGCACTaGCTGCAGGTCCGTGGGAGGGACGCTGCCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HMVLRPQGIQLH*LQVRGRDAASC Trigger: GCAGCTGGCAGCGTCCCTCCCACGGACCTGCAGCCAGTGCAGCTGGATACCTTGGGGCCGCAGGACCATGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 72 bp | AGCCGCTCCTGCAACTCCTGCACCTCCGCCTGCTGCTaGCAGCCCAACCTCCTCAGCTCCTCCTCAAACCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSCNSCTSACC*QPNLLSSSSNR Trigger: GCGGTTTGAGGAGGAGCTGAGGAGGTTGGGCTGGCAGCAGCAGGCGGAGGTGCAGGAGTTGCAGGAGCGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS GCA 72 bp | AAGGTTGAGCGGGTGACCGGCCTGCTCTGCTCCGGCTaGACGCTGTCCAGGGATTGGCTGCTGGGCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: KVERVTGLLCSG*TLSRDWLLGTA Trigger: TGCAGTGCCCAGCAGCCAATCCCTGGACAGCGTGCAGCCGGAGCAGAGCAGGCCGGTCACCCGCTCAACCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS TCA 72 bp | GGGGCGAGGCCACTGAGGGTGACCCTGTGTCCCCACTaGACACACCGAGCTCCTGAGAACTGCTACCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GARPLRVTLCPH*THRAPENCYLG Trigger: CCCCAGGTAGCAGTTCTCAGGAGCTCGGTGTGTTCAGTGGGGACACAGGGTCACCCTCAGTGGCCTCGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 72 bp | ACCTTTCCCTGGAGAGTGACTGGCTGGTGTCCTTTGTaGCCCCTCCCCACGCGCAGGCACATGGTCCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: TFPWRVTGWCPL*PLPTRRHMVLR Trigger: CCGCAGGACCATGTGCCTGCGCGTGGGGAGGGGCCACAAAGGACACCAGCCAGTCACTCTCCAGGGAAAGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS TCA 72 bp | GAGGAGCCTGCTCTTCATTGCCAAAGGTTGAGCGGGTaGCCGGCCTGCTCTGCTCCGGCTGCACGCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EEPALHCQRLSG*PACSAPAARCP Trigger: TGGACAGCGTGCAGCCGGAGCAGAGCAGGCCGGTCACCCGCTCAACCTTTGGCAATGAAGAGCAGGCTCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS GCA 72 bp | TCATTGCCAAAGGTTGAGCGGGTGACCGGCCTGCTCTaGTCCGGCTGCACGCTGTCCAGGGATTGGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLPKVERVTGLL*SGCTLSRDWLL Trigger: CAGCAGCCAATCCCTGGACAGCGTGCAGCCGGAGCAGAGCAGGCCGGTCACCCGCTCAACCTTTGGCAATGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS GCA 72 bp | ATGGCTTTCTTCAGCTCCCTTCGAGCCAGACCCAGCTaGCTGGCCTGCCACTCACACCTGTCCCGCAGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: MAFFSSLRARPS*LACHSHLSRSR Trigger: GCGACTGCGGGACAGGTGTGAGTGGCAGGCCAGGCAGCTGGGTCTGGCTCGAAGGGAGCTGAAGAAAGCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 72 bp | TTGGAGGAAGACGCAGGAGCCGCCCGGCCGGCTCCCTaGGGTGTGTCCTTAGAAGGCAGAGCCTGCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LEEDAGAARPAP*GVSLEGRACFR Trigger: TCTGAAGCAGGCTCTGCCTTCTAAGGACACACCCAAGGGAGCCGGCCGGGCGGCTCCTGCGTCTTCCTCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 72 bp | GGTGCTGGAAGTAAACTCCTGCGTGGTGTTGTTGCATaGGAGGAAGACGCAGGAGCCGCCCGGCCGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GAGSKLLRGVVA*EEDAGAARPAP Trigger: GGGAGCCGGCCGGGCGGCTCCTGCGTCTTCCTCCAATGCAACAACACCACGCAGGAGTTTACTTCCAGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | TCCGTCTCCAGTTTCTCCCGAGCTTCCTGGGAGGAGGGCGTGTCCTaGGGGTGTGTAGGAGGCTTGGGGATCCCACTGGAGCAGGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVSSFSRASWEEGVS*GCVGGLGIPLEQVV Trigger: GACCACCTGCTCCAGTGGGATCCCCAAGCCTCCTACACACCCCAAGGACACGCCCTCCTCCCAGGAAGCTCGGGAGAAACTGGAGACGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS TCA 72 bp | CTGCTTCAGAGGAGCCTGCTCTTCATTGCCAAAGGTTaGGCGGGTGACCGGCCTGCTCTGCTCCGGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLQRSLLFIAKG*AGDRPALLRLH Trigger: GTGCAGCCGGAGCAGAGCAGGCCGGTCACCCGCTCAACCTTTGGCAATGAAGAGCAGGCTCCTCTGAAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | TGCTCCCTCCCGCAGAAGGACCTGAGGCCAACAATTTaGTACTGCCCGAGTTCCCGCTACCCAGCCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: CSLPQKDLRPTI*YCPSSRYPASA Trigger: AGCGGAGGCTGGGTAGCGGGAACTCGGGCAGTACCAAATTGTTGGCCTCAGGTCCTTCTGCGGGAGGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | TGCTGGAGCTCCTCACGAAGCCGAAGGCCGCCAGCTTaGCTGCAGGGAGTCGTGAATAGCCAGGAGGACGAA | + |
|
Preference number: 6 (lower is better) Translates to: CWSSSRSRRPPA*LQGVVNSQEDE Trigger: TTCGTCCTCCTGGCTATTCACGACTCCCTGCAGCCAAGCTGGCGGCCTTCGGCTTCGTGAGGAGCTCCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | GTGCTGGAAGTAAACTCCTGCGTGGTGTTGTTGCATTaGAGGAAGACGCAGGAGCCGCCCGGCCGGCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VLEVNSCVVLLH*RKTQEPPGRLP Trigger: AGGGAGCCGGCCGGGCGGCTCCTGCGTCTTCCTCCAATGCAACAACACCACGCAGGAGTTTACTTCCAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | AGTACCTGCCTCTCCAGCGGGAGCGGCGCTCAGTGTAGGGGTGGCTaGCTGAGACCCCTCCACACCAGCACTGACTCCAGTCATTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: STCLSSGSGAQCRGG*LRPLHTSTDSSHFF Trigger: GAAGAAATGACTGGAGTCAGTGCTGGTGTGGAGGGGTCTCAGCAAGCCACCCCTACACTGAGCGCCGCTCCCGCTGGAGAGGCAGGTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS GCA 72 bp | CCGTGGGAGGGACGCTGCCAGCTGCAGCTGAGCAGCTaGTTGCTCTCTTCAGCTCTTCGTTGTCAAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PWEGRCQLQLSS*LLSSALRCQGS Trigger: AGACCCTTGACAACGAAGAGCTGAAGAGAGCAAGCAGCTGCTCAGCTGCAGCTGGCAGCGTCCCTCCCACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | GGGAGTCGGATGATGACTCGAGTTCACAGTTGTCTCTaGGTGGAGGAGGGGCGCTGGGGTACTGAACGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSRMMTRVHSCL*VEEGRWGTERG Trigger: TCCGCGTTCAGTACCCCAGCGCCCCTCCTCCACCCAGAGACAACTGTGAACTCGAGTCATCATCCGACTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 72 bp | GAAGGCAGAGCCTGCTTCAGAGGAGCCTGCTCTTCATaGCCAAAGGTTGAGCGGGTGACCGGCCTGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EGRACFRGACSS*PKVERVTGLLC Trigger: GCAGAGCAGGCCGGTCACCCGCTCAACCTTTGGCAATGAAGAGCAGGCTCCTCTGAAGCAGGCTCTGCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS TCA 72 bp | GGAGCTGAGGTCCTCTGCTTTGGGTACCCTGGCGAGTaGGGTTTGGTGGCAGCAGAAGCTGTCCTCTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GAEVLCFGYPGE*GLVAAEAVLLG Trigger: TCCCAAGAGGACAGCTTCTGCTGCCACCAAACCTCACTCGCCAGGGTACCCAAAGCAGAGGACCTCAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | TCCATTTTCTCCGTCTCCAGTTTCTCCCGAGCTTCCTaGGAGGAGGGCGTGTCCTTGGGGTGTGTAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SIFSVSSFSRAS*EEGVSLGCVGG Trigger: GCCTCCTACACACCCCAAGGACACGCCCTCCTCCCAGGAAGCTCGGGAGAAACTGGAGACGGAGAAAATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | GATCCGGGCGGATGGATGGCACTCGCTGAGGACCTCTaGCTTGCGATCAGAATCCTGCTCTTGGTTGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: DPGGWMALAEDL*LAIRILLLVDG Trigger: CCCATCAACCAAGAGCAGGATTCTGATCGCAAGCCAGAGGTCCTCAGCGAGTGCCATCCATCCGCCCGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 72 bp | TGGGAGGGACGCTGCCAGCTGCAGCTGAGCAGCTGCTaGCTCTCTTCAGCTCTTCGTTGTCAAGGGTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: WEGRCQLQLSSC*LSSALRCQGSS Trigger: CGAAGACCCTTGACAACGAAGAGCTGAAGAGAGCAAGCAGCTGCTCAGCTGCAGCTGGCAGCGTCCCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 72 bp | CGGGCGGATGGATGGCACTCGCTGAGGACCTCTGGCTaGCGATCAGAATCCTGCTCTTGGTTGATGGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RADGWHSLRTSG*RSESCSWLMGD Trigger: GTCTCCCATCAACCAAGAGCAGGATTCTGATCGCAAGCCAGAGGTCCTCAGCGAGTGCCATCCATCCGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | GCAGGTCCGTGGGAGGGACGCTGCCAGCTGCAGCTGAGCAGCTGCTaGCTCTCTTCAGCTCTTCGTTGTCAAGGGTCTTCGCCAATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGPWEGRCQLQLSSC*LSSALRCQGSSPIC Trigger: ACAAATTGGCGAAGACCCTTGACAACGAAGAGCTGAAGAGAGCAAGCAGCTGCTCAGCTGCAGCTGGCAGCGTCCCTCCCACGGACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | GTTGATTTTGGTGCTGGAAGTAAACTCCTGCGTGGTGTTGTTGCATaGGAGGAAGACGCAGGAGCCGCCCGGCCGGCTCCCTTGGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VDFGAGSKLLRGVVA*EEDAGAARPAPLGV Trigger: CACACCCAAGGGAGCCGGCCGGGCGGCTCCTGCGTCTTCCTCCAATGCAACAACACCACGCAGGAGTTTACTTCCAGCACCAAAATCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | GCGTGGAAGTTGATTTTGGTGCTGGAAGTAAACTCCTGCGTGGTGTaGTTGCATTGGAGGAAGACGCAGGAGCCGCCCGGCCGGCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AWKLILVLEVNSCVV*LHWRKTQEPPGRLP Trigger: AGGGAGCCGGCCGGGCGGCTCCTGCGTCTTCCTCCAATGCAACAACACCACGCAGGAGTTTACTTCCAGCACCAAAATCAACTTCCACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | CAGGCTTGGGTGGGAACTCATTTCGAGGAGCTGAGGTCCTCTGCTTaGGGTACCCTGGCGAGTGAGGTTTGGTGGCAGCAGAAGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QAWVGTHFEELRSSA*GTLASEVWWQQKLS Trigger: GGACAGCTTCTGCTGCCACCAAACCTCACTCGCCAGGGTACCCAAAGCAGAGGACCTCAGCTCCTCGAAATGAGTTCCCACCCAAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | TGGAAGTTGATTTTGGTGCTGGAAGTAAACTCCTGCGTGGTGTTGTaGCATTGGAGGAAGACGCAGGAGCCGCCCGGCCGGCTCCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: WKLILVLEVNSCVVL*HWRKTQEPPGRLPW Trigger: CCAAGGGAGCCGGCCGGGCGGCTCCTGCGTCTTCCTCCAATGCAACAACACCACGCAGGAGTTTACTTCCAGCACCAAAATCAACTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS TCA 72 bp | TGGTCTGCGACCTCCTGCAGGAACTTCTCGCTCATCTaGCTGAAATGGTGCGCTGGGGGCTTGATCCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: WSATSCRNFSLI*LKWCAGGLIPD Trigger: GTCTGGGATCAAGCCCCCAGCGCACCATTTCAGTCAGATGAGCGAGAAGTTCCTGCAGGAGGTCGCAGACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | ACCTGCTTCAGGCTCTGCATGTCTTCTTCCAGGTGCTaGTATGGAGCCAGCGCAATCTGTGCAGGAGCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TCFRLCMSSSRC*YGASAICAGAG Trigger: ACCCGCTCCTGCACAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152105.8 |
||
| CDS CAA 72 bp | ATTTTGGTGCTGGAAGTAAACTCCTGCGTGGTGTTGTaGCATTGGAGGAAGACGCAGGAGCCGCCCGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ILVLEVNSCVVL*HWRKTQEPPGR Trigger: CCGGCCGGGCGGCTCCTGCGTCTTCCTCCAATGCAACAACACCACGCAGGAGTTTACTTCCAGCACCAAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | CATGTTTGCAGACGGTTGAAGGTCACGGCTCGCTGCCTTCTCTTCTaGGGGAAGAGGCATGCCACATGTAGGAGGGGCATATGGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HVCRRLKVTARCLLF*GKRHATCRRGIWKP Trigger: GGGCTTCCATATGCCCCTCCTACATGTGGCATGCCTCTTCCCCAAGAAGAGAAGGCAGCGAGCCGTGACCTTCAACCGTCTGCAAACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | TTAGTGATCCGGGCGGATGGATGGCACTCGCTGAGGACCTCTGGCTaGCGATCAGAATCCTGCTCTTGGTTGATGGGAGACGGGACATTG | + |
|
Preference number: 6 (lower is better) Translates to: LVIRADGWHSLRTSG*RSESCSWLMGDGTL Trigger: CAATGTCCCGTCTCCCATCAACCAAGAGCAGGATTCTGATCGCAAGCCAGAGGTCCTCAGCGAGTGCCATCCATCCGCCCGGATCACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS TCA 72 bp | GGACCTCTGGCTTGCGATCAGAATCCTGCTCTTGGTTaGTGGGAGACGGGACATTGCACCCAATCCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GPLACDQNPALG*WETGHCTQSQL Trigger: CAGCTGGGATTGGGTGCAATGTCCCGTCTCCCATCAACCAAGAGCAGGATTCTGATCGCAAGCCAGAGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS GCA 72 bp | CACTCGCTGAGGACCTCTGGCTTGCGATCAGAATCCTaGTCTTGGTTGATGGGAGACGGGACATTGCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: HSLRTSGLRSES*SWLMGDGTLHP Trigger: TGGGTGCAATGTCCCGTCTCCCATCAACCAAGAGCAGGATTCTGATCGCAAGCCAGAGGTCCTCAGCGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS GCA 72 bp | CCGGCTCCCTTGGGTGTGTCCTTAGAAGGCAGAGCCTaGTTCAGAGGAGCCTGCTCTTCATTGCCAAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PAPLGVSLEGRA*FRGACSSLPKV Trigger: AACCTTTGGCAATGAAGAGCAGGCTCCTCTGAAGCAGGCTCTGCCTTCTAAGGACACACCCAAGGGAGCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | CGTTGTAAACATCCAGGCCATGTGGCCCTTCCATCTTaGTGTCTGATGGGCTGGACCCCTTGGCTTCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RCKHPGHVALPS*CLMGWTPWLLR Trigger: CCTCAGAAGCCAAGGGGTCCAGCCCATCAGACACCAAGATGGAAGGGCCACATGGCCTGGATGTTTACAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | AACTGGCAGCTGTTGTTAGTGATCCGGGCGGATGGATaGCACTCGCTGAGGACCTCTGGCTTGCGATCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: NWQLLLVIRADG*HSLRTSGLRSE Trigger: TTCTGATCGCAAGCCAGAGGTCCTCAGCGAGTGCCATCCATCCGCCCGGATCACTAACAACAGCTGCCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | TCCTCTGCTTTGGGTACCCTGGCGAGTGAGGTTTGGTaGCAGCAGAAGCTGTCCTCTTGGGAGACGAAACAG | + |
|
Preference number: 6 (lower is better) Translates to: SSALGTLASEVW*QQKLSSWETKQ Trigger: CTGTTTCGTCTCCCAAGAGGACAGCTTCTGCTGCCACCAAACCTCACTCGCCAGGGTACCCAAAGCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | AGGTCCTCTGCTTTGGGTACCCTGGCGAGTGAGGTTTaGTGGCAGCAGAAGCTGTCCTCTTGGGAGACGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RSSALGTLASEV*WQQKLSSWETK Trigger: TTTCGTCTCCCAAGAGGACAGCTTCTGCTGCCACCAAACCTCACTCGCCAGGGTACCCAAAGCAGAGGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | ACCTGCTTCAGGCTCTGCATGTCTTCTTCCAGGTGCTaGTATGGAGCCAGCGCAATGTGTCTCGCCCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: TCFRLCMSSSRC*YGASAMCLAHV Trigger: GACATGGGCGAGACACATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085554.5 |
||
| CDS CAA 72 bp | CGACATCAGGCGCAGTTTGGCCGGATGCTGTTTCCCTaGCCATCCTACCTACACCGGCTGACATTTTACCGG | + |
|
Preference number: 6 (lower is better) Translates to: RHQAQFGRMLFP*PSYLHRLTFYR Trigger: CCGGTAAAATGTCAGCCGGTGTAGGTAGGATGGCAAGGGAAACAGCATCCGGCCAAACTGCGCCTGATGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 72 bp | AGACGGTTGAAGGTCACGGCTCGCTGCCTTCTCTTCTaGGGGAAGAGGCATGCCACATGTAGGAGGGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: RRLKVTARCLLF*GKRHATCRRGI Trigger: TATGCCCCTCCTACATGTGGCATGCCTCTTCCCCAAGAAGAGAAGGCAGCGAGCCGTGACCTTCAACCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | AGACCCGTGGCTTCTGCAAGTCGGGCTTCAGTTTCTCGTACATGTTaGCAGACGGTTGAAGGTCACGGCTCGCTGCCTTCTCTTCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPVASASRASVSRTC*QTVEGHGSLPSLLG Trigger: CCCAAGAAGAGAAGGCAGCGAGCCGTGACCTTCAACCGTCTGCAAACATGTACGAGAAACTGAAGCCCGACTTGCAGAAGCCACGGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | CTCCAAGCTGGCGGTGACTGCTATTCCCTTGACTTGTaGCTTCTCGGTATGCCTTCTCAAGTAGCTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LQAGGDCYSLDL*LLGMPSQVAPA Trigger: GGCAGGAGCTACTTGAGAAGGCATACCGAGAAGCCACAAGTCAAGGGAATAGCAGTCACCGCCAGCTTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | CAGGAACTTCTCGCTCATCTGACTGAAATGGTGCGCTaGGGGCTTGATCCCAGACACCATCAGTCCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QELLAHLTEMVR*GLDPRHHQSRR Trigger: CCTTCTGGACTGATGGTGTCTGGGATCAAGCCCCCAGCGCACCATTTCAGTCAGATGAGCGAGAAGTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | CTGAGGACCTCTGGCTTGCGATCAGAATCCTGCTCTTaGTTGATGGGAGACGGGACATTGCACCCAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRTSGLRSESCS*LMGDGTLHPIP Trigger: TGGGATTGGGTGCAATGTCCCGTCTCCCATCAACCAAGAGCAGGATTCTGATCGCAAGCCAGAGGTCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | AAATGCTTAGTAGAGACAGCCAGGGCGTCGAAGCCTTaGATGGCTTTCTTCAGCTCCCTTCGAGCCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: KCLVETARASKP*MAFFSSLRARP Trigger: GGGTCTGGCTCGAAGGGAGCTGAAGAAAGCCATCCAAGGCTTCGACGCCCTGGCTGTCTCTACTAAGCATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | ACCTGCTTCAGGCTCTGCATGTCTTCTTCCAGGTGCTaGTATGGAGCCAGCGCAATCTGTAATGTCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TCFRLCMSSSRC*YGASAICNVSR Trigger: GCGGCTGACATTACAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110514.8 |
||
| CDS CAA 72 bp | GTCGGGCTTCAGTTTCTCGTACATGTTTGCAGACGGTaGAAGGTCACGGCTCGCTGCCTTCTCTTCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VGLQFLVHVCRR*KVTARCLLFLG Trigger: CCCCAAGAAGAGAAGGCAGCGAGCCGTGACCTTCAACCGTCTGCAAACATGTACGAGAAACTGAAGCCCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 72 bp | AGGACCTCTGGCTTGCGATCAGAATCCTGCTCTTGGTaGATGGGAGACGGGACATTGCACCCAATCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTSGLRSESCSW*MGDGTLHPIPA Trigger: AGCTGGGATTGGGTGCAATGTCCCGTCTCCCATCAACCAAGAGCAGGATTCTGATCGCAAGCCAGAGGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 72 bp | TTGATTTTGGTGCTGGAAGTAAACTCCTGCGTGGTGTaGTTGCATTGGAGGAAGACGCAGGAGCCGCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LILVLEVNSCVV*LHWRKTQEPPG Trigger: GCCGGGCGGCTCCTGCGTCTTCCTCCAATGCAACAACACCACGCAGGAGTTTACTTCCAGCACCAAAATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 72 bp | GAAATGCTTAGTAGAGACAGCCAGGGCGTCGAAGCCTaGGATGGCTTTCTTCAGCTCCCTTCGAGCCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: EMLSRDSQGVEA*DGFLQLPSSQT Trigger: GGTCTGGCTCGAAGGGAGCTGAAGAAAGCCATCCAAGGCTTCGACGCCCTGGCTGTCTCTACTAAGCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | CTTTCCAAAGAAATGCTTAGTAGAGACAGCCAGGGCGTCGAAGCCTaGGATGGCTTTCTTCAGCTCCCTTCGAGCCAGACCCAGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSKEMLSRDSQGVEA*DGFLQLPSSQTQLP Trigger: AGGCAGCTGGGTCTGGCTCGAAGGGAGCTGAAGAAAGCCATCCAAGGCTTCGACGCCCTGGCTGTCTCTACTAAGCATTTCTTTGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS TCA 72 bp | TCGGGCTTCAGTTTCTCGTACATGTTTGCAGACGGTTaGAGGTCACGGCTCGCTGCCTTCTCTTCTTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGFSFSYMFADG*RSRLAAFSSWG Trigger: TCCCCAAGAAGAGAAGGCAGCGAGCCGTGACCTTCAACCGTCTGCAAACATGTACGAGAAACTGAAGCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS GCA 72 bp | CTTCTGCAAGTCGGGCTTCAGTTTCTCGTACATGTTTaGAGACGGTTGAAGGTCACGGCTCGCTGCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLQVGLQFLVHV*RRLKVTARCLL Trigger: GAGAAGGCAGCGAGCCGTGACCTTCAACCGTCTGCAAACATGTACGAGAAACTGAAGCCCGACTTGCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | CCTGGGAATCTCAGCATCCTTTTTAGCGGAAGCCTCTaGACTGGCTTGACCTACTGCATTCCTCCAGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGNLSILFSGSL*TGLTYCIPPAG Trigger: TCCAGCTGGAGGAATGCAGTAGGTCAAGCCAGTCCAGAGGCTTCCGCTAAAAAGGATGCTGAGATTCCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | CCTGGGAATCTCAGCATCCTTTTTAGCGGAAGCCTCTGGACTGGCTaGACCTACTGCATTCCTCCAGCTGGAAAGACTTGGTCCCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PGNLSILFSGSLWTG*TYCIPPAGKTWSLN Trigger: GTTCAGGGACCAAGTCTTTCCAGCTGGAGGAATGCAGTAGGTCAAGCCAGTCCAGAGGCTTCCGCTAAAAAGGATGCTGAGATTCCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | TGCCTCTTCGTACTCCAAGCTGGCGGTGACTGCTATTCCCTTGACTaGTGGCTTCTCGGTATGCCTTCTCAAGTAGCTCCTGCCTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: CLFVLQAGGDCYSLD*WLLGMPSQVAPASL Trigger: TAGAGAGGCAGGAGCTACTTGAGAAGGCATACCGAGAAGCCACAAGTCAAGGGAATAGCAGTCACCGCCAGCTTGGAGTACGAAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | ATGATCTTGGGCCTCACGTGTTTGGGTTTGGGCATGAGGATGGGCTaGGCCTCTGCCCTTTCTTCCATTTTCTCCGTCTCCAGTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: MILGLTCLGLGMRMG*ASALSSIFSVSSFS Trigger: GGAGAAACTGGAGACGGAGAAAATGGAAGAAAGGGCAGAGGCCAAGCCCATCCTCATGCCCAAACCCAAACACGTGAGGCCCAAGATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | CTTCTGCAAGTCGGGCTTCAGTTTCTCGTACATGTTTGCAGACGGTaGAAGGTCACGGCTCGCTGCCTTCTCTTCTTGGGGAAGAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLQVGLQFLVHVCRR*KVTARCLLFLGKRH Trigger: ATGCCTCTTCCCCAAGAAGAGAAGGCAGCGAGCCGTGACCTTCAACCGTCTGCAAACATGTACGAGAAACTGAAGCCCGACTTGCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS TCA 72 bp | ACGCTGAAGCTGAACTGGGAGTCAATTCTGCATGAGTaGTGCGCTCGTTGTAAACATCCAGGCCATGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TLKLNWESILHE*CARCKHPGHVA Trigger: GGCCACATGGCCTGGATGTTTACAACGAGCGCATCACTCATGCAGAATTGACTCCCAGTTCAGCTTCAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS TCA 72 bp | ATGTTAGGCCCTCCTCATTCCGGGGTTGGACAGATTTaGGCTCCACTTTGGACTTCCCTGTCCCTTGACCTA | + |
|
Preference number: 6 (lower is better) Translates to: MLGPPHSGVGQI*APLWTSLSLDL Trigger: TAGGTCAAGGGACAGGGAAGTCCAAAGTGGAGCTCAAATCTGTCCAACCCCGGAATGAGGAGGGCCTAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS GCA 72 bp | CTTTTTAGCGGAAGCCTCTGGACTGGCTTGACCTACTaGATTCCTCCAGCTGGAAAGACTTGGTCCCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LFSGSLWTGLTY*IPPAGKTWSLN Trigger: GTTCAGGGACCAAGTCTTTCCAGCTGGAGGAATGCAGTAGGTCAAGCCAGTCCAGAGGCTTCCGCTAAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CCA 72 bp | ACCTGCTTCAGGCTCTGCATGTCTTCTTCCAGGTGCTaGTATGGAGCCAGCGCAATCTTGGACTTTGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: TCFRLCMSSSRC*YGASAILDFVI Trigger: GATCACAAAGTCCAAGATTGCGCTGGCTCCATACCAGCACCTGGAAGAAGACATGCAGAGCCTGAAGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071878.12 |
||
| CDS CAA 72 bp | CTCAGCATCCTTTTTAGCGGAAGCCTCTGGACTGGCTaGACCTACTGCATTCCTCCAGCTGGAAAGACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSILFSGSLWTG*TYCIPPAGKTW Trigger: CCAAGTCTTTCCAGCTGGAGGAATGCAGTAGGTCAAGCCAGTCCAGAGGCTTCCGCTAAAAAGGATGCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 72 bp | TCAGCTACCATCTCTTTGCCTTTTCTGGCTTCCAAATaGCTACCTCGAGGGCTCAAGAGCCCAGAGGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SATISLPFLASK*LPRGLKSPEVS Trigger: CGACACCTCTGGGCTCTTGAGCCCTCGAGGTAGCAATTTGGAAGCCAGAAAAGGCAAAGAGATGGTAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 72 bp | GGAGTCGTGAATAGCCAGGAGGACGAAGCCCAGATTTaGGTAGACTGGCCTTTGCAGCATTGGAATTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVVNSQEDEAQI*VDWPLQHWNWR Trigger: CCTCCAATTCCAATGCTGCAAAGGCCAGTCTACCAAAATCTGGGCTTCGTCCTCCTGGCTATTCACGACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS CAA 90 bp | GCTCTCTTCAGCTCTTCGTTGTCAAGGGTCTTCGCCAATTTGTCCTaGGGAATGTGCCTGGGAATCTCAGCATCCTTTTTAGCGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALFSSSLSRVFANLS*GMCLGISASFLAEA Trigger: GGCTTCCGCTAAAAAGGATGCTGAGATTCCCAGGCACATTCCCAAGGACAAATTGGCGAAGACCCTTGACAACGAAGAGCTGAAGAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS TCA 72 bp | TCAGCATCCTTTTTAGCGGAAGCCTCTGGACTGGCTTaGCCTACTGCATTCCTCCAGCTGGAAAGACTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SASFLAEASGLA*PTAFLQLERLG Trigger: ACCAAGTCTTTCCAGCTGGAGGAATGCAGTAGGTCAAGCCAGTCCAGAGGCTTCCGCTAAAAAGGATGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
||
| CDS GCA 72 bp | TCTTTCGCAAGGGCTCTTTCGCTCTTTCCAAAGAAATaGTTAGTAGAGACAGCCAGGGCGTCGAAGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SFARALSLFPKK*LVETARASKPW Trigger: CCAAGGCTTCGACGCCCTGGCTGTCTCTACTAAGCATTTCTTTGGAAAGAGCGAAAGAGCCCTTGCGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 72 bp | TTCGAATTTCCGAGCTCATCATCCAGATCACGTGACTaGGCCTCATCGCAAGAGGAGCTGACCTCCAACATG | + |
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Preference number: 6 (lower is better) Translates to: FEFPSSSSRSRD*ASSQEELTSNM Trigger: CATGTTGGAGGTCAGCTCCTCTTGCGATGAGGCCAAGTCACGTGATCTGGATGATGAGCTCGGAAATTCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 90 bp | CTGCTTGCTCTCTTCAGCTCTTCGTTGTCAAGGGTCTTCGCCAATTaGTCCTTGGGAATGTGCCTGGGAATCTCAGCATCCTTTTTAGCG | + |
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Preference number: 6 (lower is better) Translates to: LLALFSSSLSRVFAN*SLGMCLGISASFLA Trigger: CGCTAAAAAGGATGCTGAGATTCCCAGGCACATTCCCAAGGACAAATTGGCGAAGACCCTTGACAACGAAGAGCTGAAGAGAGCAAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS TCA 72 bp | GACTGGCCTTTGCAGCATTGGAATTGGAGGCTTTCTTaGGGTCTGAAGGATCAGAACCGTAGAAACTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: DWPLQHWNWRLS*GLKDQNRRNWQ Trigger: CTGCCAGTTTCTACGGTTCTGATCCTTCAGACCTCAAGAAAGCCTCCAATTCCAATGCTGCAAAGGCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS TCA 72 bp | CCTTCTCCTTCTGCAGCTTCTCACACTTGGCGGTGTTaGAGGCGTTTTATCCAGGCACTGAAGGCAGATATA | + |
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Preference number: 6 (lower is better) Translates to: PSPSAASHTWRC*RRFIQALKADI Trigger: TATATCTGCCTTCAGTGCCTGGATAAAACGCCTTCAACACCGCCAAGTGTGAGAAGCTGCAGAAGGAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146425.2 |
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| CDS CAA 72 bp | GGGGTACTGAACGCGGAATCTACTCCAGCTGGAGTGTaGTCAGTTTGGGCTGCATTTTCTAGAAGGTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: GVLNAESTPAGV*SVWAAFSRRFL Trigger: TAGGAACCTTCTAGAAAATGCAGCCCAAACTGACAACACTCCAGCTGGAGTAGATTCCGCGTTCAGTACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 90 bp | AGCTTCTCACACTTGGCGGTGTTGAAGGCAACTTCATCCCTGATGTaGGCAAGTTCGATTGACAGCTCCTTTTCTTTCGCAAGGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SFSHLAVLKATSSLM*ASSIDSSFSFARAL Trigger: AAGAGCCCTTGCGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAACATCAGGGATGAAGTTGCCTTCAACACCGCCAAGTGTGAGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS TCA 72 bp | GAAGGCAACTTCATCCCTGATGTTGGCAAGTTCGATTaGCAGCTCCTTTTCTTTCGCAAGGGCTCTTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: EGNFIPDVGKFD*QLLFFRKGSFA Trigger: AGCGAAAGAGCCCTTGCGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAACATCAGGGATGAAGTTGCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS CCA 72 bp | GGTTCCTATTTTCAGCTACCATCTCTTTGCCTTTTCTaGCTTCCAAATTGCTACCTCGAGGGCTCAAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GSYFQLPSLCLF*LPNCYLEGSRA Trigger: GGCTCTTGAGCCCTCGAGGTAGCAATTTGGAAGCCAGAAAAGGCAAAGAGATGGTAGCTGAAAATAGGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 72 bp | CACTTGGCGGTGTTGAAGGCAACTTCATCCCTGATGTaGGCAAGTTCGATTGACAGCTCCTTTTCTTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: HLAVLKATSSLM*ASSIDSSFSFA Trigger: TGCGAAAGAAAAGGAGCTGTCAATCGAACTTGCCAACATCAGGGATGAAGTTGCCTTCAACACCGCCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071878.12 ENSMUST00000085558.11 ENSMUST00000110514.8 ENSMUST00000110515.9 |
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| CDS CAA 72 bp | GGCCTCATCGCAAGAGGAGCTGACCTCCAACATGATTaGATTGGCATTTGTATCTCCCGTCCTCAGAATACT | + |
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Preference number: 6 (lower is better) Translates to: GLIARGADLQHD*IGICISRPQNT Trigger: AGTATTCTGAGGACGGGAGATACAAATGCCAATCAAATCATGTTGGAGGTCAGCTCCTCTTGCGATGAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 72 bp | TCTGCAATTCTTTCTTTGCTCCAGCTGGCGTGGAAGTaGATTTTGGTGCTGGAAGTAAACTCCTGCGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SAILSLLQLAWK*ILVLEVNSCVV Trigger: CACCACGCAGGAGTTTACTTCCAGCACCAAAATCAACTTCCACGCCAGCTGGAGCAAAGAAAGAATTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 90 bp | CTTTCTGCAATTCTTTCTTTGCTCCAGCTGGCGTGGAAGTTGATTTaGGTGCTGGAAGTAAACTCCTGCGTGGTGTTGTTGCATTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LSAILSLLQLAWKLI*VLEVNSCVVLLHWR Trigger: CCTCCAATGCAACAACACCACGCAGGAGTTTACTTCCAGCACCAAAATCAACTTCCACGCCAGCTGGAGCAAAGAAAGAATTGCAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 90 bp | CTGGATCTTTCTGCAATTCTTTCTTTGCTCCAGCTGGCGTGGAAGTaGATTTTGGTGCTGGAAGTAAACTCCTGCGTGGTGTTGTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: LDLSAILSLLQLAWK*ILVLEVNSCVVLLH Trigger: ATGCAACAACACCACGCAGGAGTTTACTTCCAGCACCAAAATCAACTTCCACGCCAGCTGGAGCAAAGAAAGAATTGCAGAAAGATCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 72 bp | AGCTCTTCGTTGTCAAGGGTCTTCGCCAATTTGTCCTaGGGAATGTGCCTGGGAATCTCAGCATCCTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: SSSLSRVFANLS*GMCLGISASFL Trigger: TAAAAAGGATGCTGAGATTCCCAGGCACATTCCCAAGGACAAATTGGCGAAGACCCTTGACAACGAAGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 72 bp | ATTCTTTCTTTGCTCCAGCTGGCGTGGAAGTTGATTTaGGTGCTGGAAGTAAACTCCTGCGTGGTGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ILSLLQLAWKLI*VLEVNSCVVLL Trigger: CAACAACACCACGCAGGAGTTTACTTCCAGCACCAAAATCAACTTCCACGCCAGCTGGAGCAAAGAAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 72 bp | GAAGCTGTCCTCTTGGGAGACGAAACAGCGGGCTTTTaGGCTTCTGGATCTTTCTGCAATTCTTTCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: EAVLLGDETAGF*ASGSFCNSFFA Trigger: AGCAAAGAAAGAATTGCAGAAAGATCCAGAAGCCAAAAAGCCCGCTGTTTCGTCTCCCAAGAGGACAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CAA 90 bp | AAACAGCGGGCTTTTTGGCTTCTGGATCTTTCTGCAATTCTTTCTTaGCTCCAGCTGGCGTGGAAGTTGATTTTGGTGCTGGAAGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: KQRAFWLLDLSAILS*LQLAWKLILVLEVN Trigger: GTTTACTTCCAGCACCAAAATCAACTTCCACGCCAGCTGGAGCAAAGAAAGAATTGCAGAAAGATCCAGAAGCCAAAAAGCCCGCTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 72 bp | AACGCGGAATCTACTCCAGCTGGAGTGTTGTCAGTTTaGGCTGCATTTTCTAGAAGGTTCCTATTTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: NAESTPAGVLSV*AAFSRRFLFSA Trigger: AGCTGAAAATAGGAACCTTCTAGAAAATGCAGCCCAAACTGACAACACTCCAGCTGGAGTAGATTCCGCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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| CDS CCA 72 bp | GATCTTTCTGCAATTCTTTCTTTGCTCCAGCTGGCGTaGAAGTTGATTTTGGTGCTGGAAGTAAACTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: DLSAILSLLQLA*KLILVLEVNSC Trigger: GCAGGAGTTTACTTCCAGCACCAAAATCAACTTCCACGCCAGCTGGAGCAAAGAAAGAATTGCAGAAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085558.11 |
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