Pregenerated sensors for MTTP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028158Ensembl transcript IDs: ENSMUST00000029805.13, ENSMUST00000098580.6
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATAGATAGAGTGGTAGCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATCTAAGTGTCATATGGTaGCTCAGAGGGACACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: IDRVVATRVSPTKNHVPHLSVIW*LRGTLW Trigger: CCACAGTGTCCCTCTGAGTCACCATATGACACTTAG...ATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGCTACCACTCTATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| 3UTR-3UTR CCA 90 bp | GCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGGAAAAATGGTTTGCTTaGGTTCCTTTCACCCCGGCC | + |
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Preference number: 2 (lower is better) Translates to: ATRVSPTKNHVPHYTIKKEKWFA*VPFTPA Trigger: GGCCGGGGTGAAAGGAACCCAAGCAAACCATTTTTC...CTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| 3UTR-3UTR TCA 90 bp | ATAGATAGAGTGGTAGCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATCTGTGGGTCTTCTCCTaGATAGGTTCAACTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: IDRVVATRVSPTKNHVPHLWVFS*IGSTLI Trigger: GATTAAAGTTGAACCTATTCAGGAGAAGACCCACAG...ATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGCTACCACTCTATCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| 3UTR-3UTR CCA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGAACAACAAAAGAAAAATaGTTTGCTTGGGTTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: LQGCPLQRTMYHITLSKRTTKEK*FAWVPF Trigger: GAAAGGAACCCAAGCAAACCATTTTTCTTTTGTTGT...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | AACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGGGAGTCTGAGCAGAGGTaGCGGCATCCACCAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: NTVLSESKGQARQSISFWESEQR*RHPPAE Trigger: CTCAGCTGGTGGATGCCGTCACCTCTGCTCAGACTC...CCAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | AACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGGGAAGTCCGGAGGTGCTaGATGAAGGCCAGGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: NTVLSESKGQARQSISFWEVRRC*MKARKL Trigger: GAGCTTCCTGGCCTTCATTCAGCACCTCCGGACTTC...CCAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | AAAGAAAAATGGTTTGCTTGGGTTCCTTTCACCCCGGCCCTTCTTAGGCAGTGGAGCGAGTCTGGAGTCTaGGCAGAGGTGACGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: KEKWFAWVPFTPALLRQWSESGV*AEVTAS Trigger: GGATGCCGTCACCTCTGCTCAGACTCCAGACTCGCT...CCACTGCCTAAGAAGGGCCGGGGTGAAAGGAACCCAAGCAAACCATTTTTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGAGCCCTTTCACCACGCTaGCAGGGTCGCCGGATGCCG | + |
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Preference number: 4 (lower is better) Translates to: LQGCPLQRTMYHITLSKRALSPR*QGRRMP Trigger: CGGCATCCGGCGACCCTGTCAGCGTGGTGAAAGGGC...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | ATAGATAGAGTGGTAGCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATACAGTGGTGGCCAGGTaGCTGACGGGCCCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IDRVVATRVSPTKNHVPHTVVAR*LTGPSP Trigger: TGGAGAAGGGCCCGTCAGCCACCTGGCCACCACTGT...ATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGCTACCACTCTATCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | AAAGAAAAATGGTTTGCTTGGGTTCCTTTCACCCCGGCCCTTCTTAGGCAGTGGAGCCCTGGTCTCTTCTaGAAGCACAGCGGTGACAAA | + |
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Preference number: 4 (lower is better) Translates to: KEKWFAWVPFTPALLRQWSPGLF*KHSGDK Trigger: TTTGTCACCGCTGTGCTTGCAGAAGAGACCAGGGCT...CCACTGCCTAAGAAGGGCCGGGGTGAAAGGAACCCAAGCAAACCATTTTTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | AAACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGTCAGCCTTGTCCATCTaGATGCAGACCAAGAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: KHCALREQGSGTSKHIVLSALSI*MQTKNG Trigger: CCCGTTCTTGGTCTGCATGCAGATGGACAAGGCTGA...CAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | AACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGGCCAAAAAGTCCAGGATaGCTTCTAGCGAGTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NTVLSESKGQARQSISFWPKSPG*LLASLE Trigger: CTCCAGACTCGCTAGAAGCCATCCTGGACTTTTTGG...CCAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | AACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGGTTTTGCCCTGGAAGATaGTCTTCTCGCCTCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: NTVLSESKGQARQSISFWFCPGR*SSRLSV Trigger: AACAGAGAGGCGAGAAGAGCATCTTCCAGGGCAAAA...CCAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | AACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGGACTACCATGAAGCTCTaGCTTCCCGATGTACTGGAA | + |
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Preference number: 4 (lower is better) Translates to: NTVLSESKGQARQSISFWTTMKL*LPDVLE Trigger: TTCCAGTACATCGGGAAGGCAGAGCTTCATGGTAGT...CCAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | AAACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGTCAAGGCAAAAGCCCTaGTCTCTTCTGCAAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: KHCALREQGSGTSKHIVLSRQKP*SLLQAQ Trigger: CTGTGCTTGCAGAAGAGACCAGGGCTTTTGCCTTGA...CAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGAAAGGCCAGGAAGCTCTaGACGGCCTCGGCCTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LQGCPLQRTMYHITLSKRKARKL*TASALD Trigger: GTCCAAGGCCGAGGCCGTCCAGAGCTTCCTGGCCTT...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | AAAGAAAAATGGTTTGCTTGGGTTCCTTTCACCCCGGCCCTTCTTAGGCAGTGGTCGGGAGTTCCCCAATaGACAGCAGGATGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KEKWFAWVPFTPALLRQWSGVPQ*TAGCSS Trigger: TGAAGAACATCCTGCTGTCCATTGGGGAACTCCCGA...CCACTGCCTAAGAAGGGCCGGGGTGAAAGGAACCCAAGCAAACCATTTTTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | AACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGGGTGACTTGGATCACTTaGTCATCATCACCATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NTVLSESKGQARQSISFWVTWIT*SSSPSG Trigger: TCCTGATGGTGATGATGATCAAGTGATCCAAGTCAC...CCAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | AAAGAAAAATGGTTTGCTTGGGTTCCTTTCACCCCGGCCCTTCTTAGGCAGTGGGTTCCAGAGCTTAGCTaGATCTGGAATAAGCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: KEKWFAWVPFTPALLRQWVPELS*IWNKLA Trigger: GGCTAGCTTATTCCAGATGCAGCTAAGCTCTGGAAC...CCACTGCCTAAGAAGGGCCGGGGTGAAAGGAACCCAAGCAAACCATTTTTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | AAACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGTGCTTTAATTACACCTaGCACTTGCTTCCCGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: KHCALREQGSGTSKHIVLCFNYT*HLLPGD Trigger: ATCCCCGGGAAGCAAGTGGCAGGTGTAATTAAAGCA...CAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | AAACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGACAGGATGGCTGACATaGCAGCATAAGAGTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KHCALREQGSGTSKHIVLTGWLT*QHKSQG Trigger: ACCTTGACTCTTATGCTGGCATGTCAGCCATCCTGT...CAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | ATAGATAGAGTGGTAGCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATGACAGGGTCGCCGGATaGCGACAGCATTTTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: IDRVVATRVSPTKNHVPHDRVAG*RQHFGH Trigger: ATGTCCAAAATGCTGTCGGCATCCGGCGACCCTGTC...ATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGCTACCACTCTATCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | AAAGAAAAATGGTTTGCTTGGGTTCCTTTCACCCCGGCCCTTCTTAGGCAGTGGGCCTTCCCGATGTACTaGAAGATGTTCAGGTTACTT | + |
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Preference number: 4 (lower is better) Translates to: KEKWFAWVPFTPALLRQWAFPMY*KMFRLL Trigger: AAGTAACCTGAACATCTTCCAGTACATCGGGAAGGC...CCACTGCCTAAGAAGGGCCGGGGTGAAAGGAACCCAAGCAAACCATTTTTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | GCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGGACAGATGTGGCTTTTaGACTGACACCCAGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: ATRVSPTKNHVPHYTIKKDRCGF*TDTQHL Trigger: CAGGTGCTGGGTGTCAGTTCAAAAGCCACATCTGTC...CTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | AAACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGCACTTCTTTCTTCTCTaGCTTCAGAATCTGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: KHCALREQGSGTSKHIVLHFFLL*LQNLED Trigger: ATCCTCCAGATTCTGAAGGCAGAGAAGAAAGAAGTG...CAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | ATAGATAGAGTGGTAGCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATCCTTGTCCATCTGCATaGAGACCAAGAACGGGTACT | + |
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Preference number: 4 (lower is better) Translates to: IDRVVATRVSPTKNHVPHPCPSA*RPRTGT Trigger: AGTACCCGTTCTTGGTCTGCATGCAGATGGACAAGG...ATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGCTACCACTCTATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | AACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGGATTTTCTATGCCCACTaGCTCGTTTTCATAGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: NTVLSESKGQARQSISFWIFYAH*LVFIGV Trigger: TACTCCTATGAAAACGAGCCAGTGGGCATAGAAAAT...CCAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | AACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGGAAGAGGATCCACTCTTaGAGAAACGGTCATAATTGT | + |
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Preference number: 4 (lower is better) Translates to: NTVLSESKGQARQSISFWKRIHS*RNGHNC Trigger: ACAATTATGACCGTTTCTCCAAGAGTGGATCCTCTT...CCAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGACTGCAAGCACAGCGGTaGCAAAGCTGTCCTCTATCT | + |
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Preference number: 4 (lower is better) Translates to: LQGCPLQRTMYHITLSKRLQAQR*QSCPLS Trigger: AGATAGAGGACAGCTTTGTCACCGCTGTGCTTGCAG...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | GAGATGTCACAGTACATTTTAATTCCGTCTCTCGCCTTGTCGCTTATAAAACTAGCTCCAGGTTCTTTCTaGTGGACTTCCAGTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: EMSQYILIPSLALSLIKLAPGSF*WTSSAP Trigger: CGGAGCACTGGAAGTCCATCAGAAAGAACCTGGAGC...TAGTTTTATAAGCGACAAGGCGAGAGACGGAATTAAAATGTACTGTGACATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | AAAGAAAAATGGTTTGCTTGGGTTCCTTTCACCCCGGCCCTTCTTAGGCAGTGGTACTGCTGTCACTTTTaGAATCCAAAAAGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KEKWFAWVPFTPALLRQWYCCHF*NPKSPG Trigger: TCCTGGACTTTTTGGATTTCAAAAGTGACAGCAGTA...CCACTGCCTAAGAAGGGCCGGGGTGAAAGGAACCCAAGCAAACCATTTTTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | GAGATGTCACAGTACATTTTAATTCCGTCTCTCGCCTTGTCGCTTATAAAACTATCAGAAGGAGCGGGATaGCTTCGGGAAGCAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: EMSQYILIPSLALSLIKLSEGAG*LREARH Trigger: ATGCCTTGCTTCCCGAAGGCATCCCGCTCCTTCTGA...TAGTTTTATAAGCGACAAGGCGAGAGACGGAATTAAAATGTACTGTGACATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | GCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGGGTGTACTTTTGCCCTaGAAGATGCTCTTCTCGCCT | + |
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Preference number: 4 (lower is better) Translates to: ATRVSPTKNHVPHYTIKKGVLLP*KMLFSP Trigger: AGGCGAGAAGAGCATCTTCCAGGGCAAAAGTACACC...CTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | CAATGCAAAACTAGACTCACTGTACTAGTTAGGACTTTTGCAAAGTACAAGAAGACGGCATCCACCAGCTaGGGGAGCACTTCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: QCKTRLTVLVRTFAKYKKTASTS*GSTSFF Trigger: GAAGAAAGAAGTGCTCCCTCAGCTGGTGGATGCCGT...CTTCTTGTACTTTGCAAAAGTCCTAACTAGTACAGTGAGTCTAGTTTTGCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | TTATTTGTCATCATCACAATTTATTTTCTACCTCAGCTAAACGTCCACTTCGTGACTGCACTGTGGAGATaGACTCCAGCCCAGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LFVIITIYFLPQLNVHFVTALWR*TPAQPL Trigger: CAGAGGCTGGGCTGGAGTTCATCTCCACAGTGCAGT...CACGAAGTGGACGTTTAGCTGAGGTAGAAAATAAATTGTGATGATGACAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | ATAGATAGAGTGGTAGCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACTTCTCCTCAGAATaGCAGAGCCAGAGTAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: IDRVVATRVSPTKNHVPHYFSSE*QSQSKG Trigger: TCCTTTACTCTGGCTCTGGCATTCTGAGGAGAAGTA...ATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGCTACCACTCTATCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGATACTTTGTCTCGAATTaGCTGAGTGGGGCTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LQGCPLQRTMYHITLSKRYFVSN*LSGASA Trigger: GGCTGAAGCCCCACTCAGGCAATTCGAGACAAAGTA...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | AAACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGCTATTTTTCCTGCTATaGTTTGTTGGAAGTTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: KHCALREQGSGTSKHIVLLFFLL*FVGSSR Trigger: CCTTGAACTTCCAACAAACCATAGCAGGAAAAATAG...CAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | ATAGATAGAGTGGTAGCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATATAGCTAGACCACCCTaGATCTCCATATTGGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: IDRVVATRVSPTKNHVPHIARPP*ISILAF Trigger: AAAGGCCAATATGGAGATCCAGGGTGGTCTAGCTAT...ATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGCTACCACTCTATCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | GAGATGTCACAGTACATTTTAATTCCGTCTCTCGCCTTGTCGCTTATAAAACTACTTCAGTGGAGTACGTaGGCTTGTATAGCCGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: EMSQYILIPSLALSLIKLLQWST*ACIAAH Trigger: ATGAGCGGCTATACAAGCTCACGTACTCCACTGAAG...TAGTTTTATAAGCGACAAGGCGAGAGACGGAATTAAAATGTACTGTGACATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | GAGATGTCACAGTACATTTTAATTCCGTCTCTCGCCTTGTCGCTTATAAAACTAGTGACAGGCCTAAGCTaGACATCAAACAGGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: EMSQYILIPSLALSLIKLVTGLS*TSNRMA Trigger: AGCCATCCTGTTTGATGTTCAGCTTAGGCCTGTCAC...TAGTTTTATAAGCGACAAGGCGAGAGACGGAATTAAAATGTACTGTGACATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | GAGATGTCACAGTACATTTTAATTCCGTCTCTCGCCTTGTCGCTTATAAAACTACAAGAACGGGTACTGTaGGAACTGCACTGTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: EMSQYILIPSLALSLIKLQERVL*ELHCGD Trigger: ATCTCCACAGTGCAGTTCTCACAGTACCCGTTCTTG...TAGTTTTATAAGCGACAAGGCGAGAGACGGAATTAAAATGTACTGTGACATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | CATCCAGAGAAAAATCTAATGGATGCTCTGAGGCTCAATAATTTTTATCCCTGTCTTCATCAGGGTGGGTaGCAAAGCCACAGGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: HPEKNLMDALRLNNFYPCLHQGG*QSHRHR Trigger: TCTATGCCTGTGGCTTTGCCACCCACCCTGATGAAG...ACAGGGATAAAAATTATTGAGCCTCAGAGCATCCATTAGATTTTTCTCTGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | CAATGCAAAACTAGACTCACTGTACTAGTTAGGACTTTTGCAAAGTACAAGAAGATGTGGCTTTTGAACTaGCACCCAGCACCTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: QCKTRLTVLVRTFAKYKKMWLLN*HPAPGL Trigger: CAAACCAGGTGCTGGGTGTCAGTTCAAAAGCCACAT...CTTCTTGTACTTTGCAAAAGTCCTAACTAGTACAGTGAGTCTAGTTTTGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | TTATTTGTCATCATCACAATTTATTTTCTACCTCAGCTAAACGTCCACTTCGTGCTTCCACCACTGCCTTaGGCTTGCAGCCTTCATTCT | + |
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Preference number: 4 (lower is better) Translates to: LFVIITIYFLPQLNVHFVLPPLP*ACSLHS Trigger: AGAATGAAGGCTGCAAGCTCAAGGCAGTGGTGGAAG...CACGAAGTGGACGTTTAGCTGAGGTAGAAAATAAATTGTGATGATGACAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR TCA 90 bp | TTATTTGTCATCATCACAATTTATTTTCTACCTCAGCTAAACGTCCACTTCGTGTTGTCTCGAATTGCCTaGGTGGGGCTTCAGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFVIITIYFLPQLNVHFVLSRIA*VGLQPC Trigger: ACAAGGCTGAAGCCCCACTCAGGCAATTCGAGACAA...CACGAAGTGGACGTTTAGCTGAGGTAGAAAATAAATTGTGATGATGACAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR GCA 90 bp | CATCCAGAGAAAAATCTAATGGATGCTCTGAGGCTCAATAATTTTTATCCCTGTGGGTACTGTGAGAACTaGACTGTGGAGATGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPEKNLMDALRLNNFYPCGYCEN*TVEMNS Trigger: GGAGTTCATCTCCACAGTGCAGTTCTCACAGTACCC...ACAGGGATAAAAATTATTGAGCCTCAGAGCATCCATTAGATTTTTCTCTGGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CCA 90 bp | ATAGATAGAGTGGTAGCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATGTCCCACAATGGGAATaGCTTTGTATTTGGAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: IDRVVATRVSPTKNHVPHVPQWE*LCIWNQ Trigger: TTGATTCCAAATACAAAGCCATTCCCATTGTGGGAC...ATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGCTACCACTCTATCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CCA 90 bp | CAATGCAAAACTAGACTCACTGTACTAGTTAGGACTTTTGCAAAGTACAAGAAGGGACCTGTCCCACAATaGGAATGGCTTTGTATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCKTRLTVLVRTFAKYKKGPVPQ*EWLCIW Trigger: CCAAATACAAAGCCATTCCCATTGTGGGACAGGTCC...CTTCTTGTACTTTGCAAAAGTCCTAACTAGTACAGTGAGTCTAGTTTTGCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR TCA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGACAGACTGAATTCCATTaGACCAGAAATATCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQGCPLQRTMYHITLSKRQTEFH*TRNINS Trigger: GCTATTGATATTTCTGGTTCAATGGAATTCAGTCTG...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR GCA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGACGACACTATTTTTCCTaGTATGGTTTGTTGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQGCPLQRTMYHITLSKRRHYFS*YGLLEV Trigger: AACTTCCAACAAACCATAGCAGGAAAAATAGTGTCG...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CCA 90 bp | TTATTTGTCATCATCACAATTTATTTTCTACCTCAGCTAAACGTCCACTTCGTGCCAGCAGGTACATTGTaGTGTCTTCTTTCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFVIITIYFLPQLNVHFVPAGTL*CLLSSL Trigger: CAGAGAAGAAAGAAGACACCACAATGTACCTGCTGG...CACGAAGTGGACGTTTAGCTGAGGTAGAAAATAAATTGTGATGATGACAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | CAATGCAAAACTAGACTCACTGTACTAGTTAGGACTTTTGCAAAGTACAAGAAGAAATGCAGGATGTCTTaGACAACAGTGAGCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QCKTRLTVLVRTFAKYKKKCRMS*TTVSMY Trigger: ATACATGCTCACTGTTGTGCAAGACATCCTGCATTT...CTTCTTGTACTTTGCAAAAGTCCTAACTAGTACAGTGAGTCTAGTTTTGCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR GCA 90 bp | TTATTTGTCATCATCACAATTTATTTTCTACCTCAGCTAAACGTCCACTTCGTGGCAGGCATTTCAAAATaGAGGATGTCTTGCACAACA | + |
|
Preference number: 4 (lower is better) Translates to: LFVIITIYFLPQLNVHFVAGISK*RMSCTT Trigger: TGTTGTGCAAGACATCCTGCATTTTGAAATGCCTGC...CACGAAGTGGACGTTTAGCTGAGGTAGAAAATAAATTGTGATGATGACAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CCA 90 bp | TTATTTGTCATCATCACAATTTATTTTCTACCTCAGCTAAACGTCCACTTCGTGACCTTACGATTCTGGTaGTATATCCTGTTCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFVIITIYFLPQLNVHFVTLRFW*YILFKV Trigger: GACCTTGAACAGGATATACCACCAGAATCGTAAGGT...CACGAAGTGGACGTTTAGCTGAGGTAGAAAATAAATTGTGATGATGACAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR GCA 90 bp | CATCCAGAGAAAAATCTAATGGATGCTCTGAGGCTCAATAATTTTTATCCCTGTTTCAGCTCCAATTTCTaGTTCGACACTATTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HPEKNLMDALRLNNFYPCFSSNF*FDTIFP Trigger: AGGAAAAATAGTGTCGAAGCAGAAATTGGAGCTGAA...ACAGGGATAAAAATTATTGAGCCTCAGAGCATCCATTAGATTTTTCTCTGGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS TCA 90 bp | GGACGGCCTCGGCCTTGGACAGGTTTTCAGGCTCCAGGTTCTTTCTaGTGGACTTCCAGTGCTCCGCCAGAGAAGGGCATCCTTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRPRPWTGFQAPGSF*WTSSAPPEKGILCR Trigger: TCTGCAAAGGATGCCCTTCTCTGGCGGAGCACTGGAAGTCCATCAGAAAGAACCTGGAGCCTGAAAACCTGTCCAAGGCCGAGGCCGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
||
| CDS TCA 90 bp | TTCAGAATCTGGAGGATCTCTTCTCTCCTCGAAGTCCGGAGGTGCTaGATGAAGGCCAGGAAGCTCTGGACGGCCTCGGCCTTGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRIWRISSLLEVRRC*MKARKLWTASALDR Trigger: CCTGTCCAAGGCCGAGGCCGTCCAGAGCTTCCTGGCCTTCATTCAGCACCTCCGGACTTCGAGGAGAGAAGAGATCCTCCAGATTCTGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
||
| CDS CCA 90 bp | AAGGTCTTCTTCACCTCATCTGTGATGAAGGAGACATCGTATCTCTaGAGAACAGTGGTGGCCAGGTGGCTGACGGGCCCTTCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KVFFTSSVMKETSYL*RTVVARWLTGPSPA Trigger: GGCTGGAGAAGGGCCCGTCAGCCACCTGGCCACCACTGTTCTCCAGAGATACGATGTCTCCTTCATCACAGATGAGGTGAAGAAGACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 90 bp | AATGCCAGAGCCAGAGTAAAGGATGTCAAGGCTGTATGTGGACGCTaGACGGGGGCTACGTTCTACGTAGCCAGTATAGGCAGAAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NARARVKDVKAVCGR*TGATFYVASIGRRG Trigger: TCCTCTTCTGCCTATACTGGCTACGTAGAACGTAGCCCCCGTGCAGCGTCCACATACAGCCTTGACATCCTTTACTCTGGCTCTGGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 90 bp | ATCCACCGGAGTTATCGCTTTCTGGCTGAGGTGGGAATACCACGTTaGACATCTCAGAGTTCTCTTGATGGAGGGGGAGTTCACATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IHRSYRFLAEVGIPR*TSQSSLDGGGVHIR Trigger: CCGGATGTGAACTCCCCCTCCATCAAGAGAACTCTGAGATGTGCAACGTGGTATTCCCACCTCAGCCAGAAAGCGATAACTCCGGTGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS-3UTR CAA 90 bp | AAAGAAAAATGGTTTGCTTGGGTTCCTTTCACCCCGGCCCTTCTTAGGCAGTGGAGTGGGGCTTCAGCCTaGTCCATCTGCATGCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: KEKWFAWVPFTPALLRQWSGASA*SICMQT Trigger: GGTCTGCATGCAGATGGACAAGGCTGAAGCCCCACT...CCACTGCCTAAGAAGGGCCGGGGTGAAAGGAACCCAAGCAAACCATTTTTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS GCA 90 bp | TACTTTGTCTCGAATTGCCTGAGTGGGGCTTCAGCCTTGTCCATCTaGATGCAGACCAAGAACGGGTACTGTGAGAACTGCACTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YFVSNCLSGASALSI*MQTKNGYCENCTVE Trigger: CTCCACAGTGCAGTTCTCACAGTACCCGTTCTTGGTCTGCATGCAGATGGACAAGGCTGAAGCCCCACTCAGGCAATTCGAGACAAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS-3UTR CAA 90 bp | AACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGGTTTGACCACTTTGTCTaGCTGGGCCTGGTAGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NTVLSESKGQARQSISFWFDHFV*LGLVGH Trigger: GTGACCTACCAGGCCCAGCAAGACAAAGTGGTCAAA...CCAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS CCA 90 bp | AACTGCTTTAATTACACCTGCCACTTGCTTCCCGGGGATCATCCTTaGGCCGGCTTCAGTTGTCTTCAGCTCCAATTTCTGCTTCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: NCFNYTCHLLPGDHP*AGFSCLQLQFLLRH Trigger: GTGTCGAAGCAGAAATTGGAGCTGAAGACAACTGAAGCCGGCCCAAGGATGATCCCCGGGAAGCAAGTGGCAGGTGTAATTAAAGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CCA 90 bp | ACATGCCAGCATAAGAGTCAAGGTTCTCCTCTCCTTCATCAGGAGTaGCTGCAATTAAGCCTTCCAGCCCTTGGGCTTCAATCACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: TCQHKSQGSPLLHQE*LQLSLPALGLQSPP Trigger: AGGTGGTGATTGAAGCCCAAGGGCTGGAAGGCTTAATTGCAGCCACTCCTGATGAAGGAGAGGAGAACCTTGACTCTTATGCTGGCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS-3UTR CAA 90 bp | ATAGATAGAGTGGTAGCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATGTAGCCCACGCTGTCTaGCGGTTTTCCTTTGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IDRVVATRVSPTKNHVPHVAHAV*RFSFAP Trigger: GGGGGCAAAGGAAAACCGCAAGACAGCGTGGGCTAC...ATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGCTACCACTCTATCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS GCA 90 bp | CCTTCCCGATGTACTGGAAGATGTTCAGGTTACTTCTCCTCAGAATaGCAGAGCCAGAGTAAAGGATGTCAAGGCTGTATGTGGACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSRCTGRCSGYFSSE*QSQSKGCQGCMWTL Trigger: CAGCGTCCACATACAGCCTTGACATCCTTTACTCTGGCTCTGGCATTCTGAGGAGAAGTAACCTGAACATCTTCCAGTACATCGGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 90 bp | ACATATCCCCTGCCTGTAGATAGCCTTTCATACTTTGTCTCGAATTaGCTGAGTGGGGCTTCAGCCTTGTCCATCTGCATGCAGACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TYPLPVDSLSYFVSN*LSGASALSICMQTK Trigger: CTTGGTCTGCATGCAGATGGACAAGGCTGAAGCCCCACTCAGGCAATTCGAGACAAAGTATGAAAGGCTATCTACAGGCAGGGGATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS-3UTR CAA 90 bp | AAACACTGTGCTCTCAGAGAGCAAGGGTCAGGCACGTCAAAGCATATCGTTCTGATACTTTGTCTCGAATaGCCTGAGTGGGGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KHCALREQGSGTSKHIVLILCLE*PEWGFS Trigger: GCTGAAGCCCCACTCAGGCAATTCGAGACAAAGTAT...CAGAACGATATGCTTTGACGTGCCTGACCCTTGCTCTCTGAGAGCACAGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS TCA 90 bp | GACAAAGCTGTCCTCTATCTTGTAGGTAGTGACAGATGTGGCTTTTaGACTGACACCCAGCACCTGGTTTGCCGTTGTAAATCCAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: DKAVLYLVGSDRCGF*TDTQHLVCRCKSRP Trigger: CGGTCTGGATTTACAACGGCAAACCAGGTGCTGGGTGTCAGTTCAAAAGCCACATCTGTCACTACCTACAAGATAGAGGACAGCTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 90 bp | ACAGCAGGATGTTCTTCACATCCATGTAGGATGGGTTCTTTAAGATaGCAGCAGCGGCAGTTGTGCGCACCGTCTTCTCATGAACCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: TAGCSSHPCRMGSLR*QQRQLCAPSSHEPY Trigger: GTAAGGTTCATGAGAAGACGGTGCGCACAACTGCCGCTGCTGTCATCTTAAAGAACCCATCCTACATGGATGTGAAGAACATCCTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 90 bp | GAGGACCTGTCCCACAATGGGAATGGCTTTGTATTTGGAATCAACTaGTTTAATTACACCTGCCACTTGCTTCCCGGGGATCATCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EDLSHNGNGFVFGIN*FNYTCHLLPGDHPW Trigger: CCAAGGATGATCCCCGGGAAGCAAGTGGCAGGTGTAATTAAAGCAGTTGATTCCAAATACAAAGCCATTCCCATTGTGGGACAGGTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS-3UTR CAA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGATCCCGGGGATCATCCTaGGGCCGGCTTCAGTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQGCPLQRTMYHITLSKRSRGSS*GRLQLS Trigger: AGACAACTGAAGCCGGCCCAAGGATGATCCCCGGGA...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS GCA 90 bp | TGCTATGGTTTGTTGGAAGTTCAAGGCAAAAGCCCTGGTCTCTTCTaGAAGCACAGCGGTGACAAAGCTGTCCTCTATCTTGTAGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: CYGLLEVQGKSPGLF*KHSGDKAVLYLVGS Trigger: ACTACCTACAAGATAGAGGACAGCTTTGTCACCGCTGTGCTTGCAGAAGAGACCAGGGCTTTTGCCTTGAACTTCCAACAAACCATAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 90 bp | GCGGTTTTCCTTTGCCCCCATCAAGAAACACTTCAGTGGAGTACGTaGGCTTGTATAGCCGCTCATTATTTAATGAGAGGCCAGTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AVFLCPHQETLQWST*ACIAAHYLMRGQLC Trigger: ACACAACTGGCCTCTCATTAAATAATGAGCGGCTATACAAGCTCACGTACTCCACTGAAGTGTTTCTTGATGGGGGCAAAGGAAAACCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 90 bp | TTAGGTGTACTTTTGCCCTGGAAGATGCTCTTCTCGCCTCTCTGTTaGCCCGCATTTTCAACGTTAACAGCTGTTATCGTGACTTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LGVLLPWKMLFSPLC*PAFSTLTAVIVTWI Trigger: GATCCAAGTCACGATAACAGCTGTTAACGTTGAAAATGCGGGTCAACAGAGAGGCGAGAAGAGCATCTTCCAGGGCAAAAGTACACCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 90 bp | TTCTTTAAGATGACAGCAGCGGCAGTTGTGCGCACCGTCTTCTCATaGACCTTACGATTCTGGTGGTATATCCTGTTCAAGGTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFKMTAAAVVRTVFS*TLRFWWYILFKVFF Trigger: GAAGAAGACCTTGAACAGGATATACCACCAGAATCGTAAGGTTCATGAGAAGACGGTGCGCACAACTGCCGCTGCTGTCATCTTAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 90 bp | GGGATCATCCTTGGGCCGGCTTCAGTTGTCTTCAGCTCCAATTTCTaGTTCGACACTATTTTTCCTGCTATGGTTTGTTGGAAGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GIILGPASVVFSSNF*FDTIFPAMVCWKFK Trigger: CTTGAACTTCCAACAAACCATAGCAGGAAAAATAGTGTCGAAGCAGAAATTGGAGCTGAAGACAACTGAAGCCGGCCCAAGGATGATCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS-3UTR CAA 90 bp | AAAGAAAAATGGTTTGCTTGGGTTCCTTTCACCCCGGCCCTTCTTAGGCAGTGGACTCGACGGATCATTTaGCTTGCAGGCATTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KEKWFAWVPFTPALLRQWTRRII*LAGISK Trigger: TTTTGAAATGCCTGCAAGCAAAATGATCCGTCGAGT...CCACTGCCTAAGAAGGGCCGGGGTGAAAGGAACCCAAGCAAACCATTTTTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS TCA 90 bp | CCCGCATTTTCAACGTTAACAGCTGTTATCGTGACTTGGATCACTTaGTCATCATCACCATCAGGATTCCTCCACAGTAACACAACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PAFSTLTAVIVTWIT*SSSPSGFLHSNTTS Trigger: GGACGTTGTGTTACTGTGGAGGAATCCTGATGGTGATGATGATCAAGTGATCCAAGTCACGATAACAGCTGTTAACGTTGAAAATGCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 90 bp | CAATCCCCAGAGATATCTACCTCGTTGGTAGTTCCAGAGCTTAGCTaGATCTGGAATAAGCTAGCCAAGCCTCTCTTGAGATTTTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: QSPEISTSLVVPELS*IWNKLAKPLLRFSM Trigger: CATAGAAAATCTCAAGAGAGGCTTGGCTAGCTTATTCCAGATGCAGCTAAGCTCTGGAACTACCAACGAGGTAGATATCTCTGGGGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS-3UTR CAA 90 bp | GCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGTTGGGCCGGCTTCAGTaGTCTTCAGCTCCAATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ATRVSPTKNHVPHYTIKKLGRLQ*SSAPIS Trigger: AGAAATTGGAGCTGAAGACAACTGAAGCCGGCCCAA...CTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | GCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGGGGCCAGCAGGTACATaGTGGTGTCTTCTTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ATRVSPTKNHVPHYTIKKGPAGT*WCLLSS Trigger: AGAAGAAAGAAGACACCACAATGTACCTGCTGGCCC...CTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS TCA 90 bp | GTGAGCTTGTATAGCCGCTCATTATTTAATGAGAGGCCAGTTGTGTaGCCGCTATTTTGCATGGCACACAAAGTAGGAAAGAGTAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLYSRSLFNERPVV*PLFCMAHKVGKSNS Trigger: GCTGTTACTCTTTCCTACTTTGTGTGCCATGCAAAATAGCGGTCACACAACTGGCCTCTCATTAAATAATGAGCGGCTATACAAGCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098580.6 |
||
| CDS-3UTR CAA 90 bp | GCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGCGTGACTTGGATCACTaGATCATCATCACCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATRVSPTKNHVPHYTIKKRDLDH*IIITIR Trigger: CCTGATGGTGATGATGATCAAGTGATCCAAGTCACG...CTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGATGCAGAGCCTCCAGGTaGTCCTTCCCTATGATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LQGCPLQRTMYHITLSKRCRASR*SFPMIL Trigger: TAAGATCATAGGGAAGGACAACCTGGAGGCTCTGCA...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | CAATGCAAAACTAGACTCACTGTACTAGTTAGGACTTTTGCAAAGTACAAGAAGGCTTCCACCACTGCCTaGAGCTTGCAGCCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: QCKTRLTVLVRTFAKYKKASTTA*SLQPSF Trigger: GAATGAAGGCTGCAAGCTCAAGGCAGTGGTGGAAGC...CTTCTTGTACTTTGCAAAAGTCCTAACTAGTACAGTGAGTCTAGTTTTGCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS GCA 90 bp | TTCAGTTGTCTTCAGCTCCAATTTCTGCTTCGACACTATTTTTCCTaGTATGGTTTGTTGGAAGTTCAAGGCAAAAGCCCTGGTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSCLQLQFLLRHYFS*YGLLEVQGKSPGLF Trigger: GAAGAGACCAGGGCTTTTGCCTTGAACTTCCAACAAACCATAGCAGGAAAAATAGTGTCGAAGCAGAAATTGGAGCTGAAGACAACTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
||
| CDS-3UTR CAA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGATCTTGCGGTTTTCCTTaGCCCCCATCAAGAAACACT | + |
|
Preference number: 5 (lower is better) Translates to: LQGCPLQRTMYHITLSKRSCGFP*PPSRNT Trigger: AGTGTTTCTTGATGGGGGCAAAGGAAAACCGCAAGA...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGACTAGCCAAGCCTCTCTaGAGATTTTCTATGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LQGCPLQRTMYHITLSKRLAKPL*RFSMPT Trigger: AGTGGGCATAGAAAATCTCAAGAGAGGCTTGGCTAG...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGAGAGATATCTACCTCGTaGGTAGTTCCAGAGCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQGCPLQRTMYHITLSKREISTS*VVPELS Trigger: GCTAAGCTCTGGAACTACCAACGAGGTAGATATCTC...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | ATAGATAGAGTGGTAGCTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATAAAATGCAGGATGTCTaGCACAACAGTGAGCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: IDRVVATRVSPTKNHVPHKMQDV*HNSEHV Trigger: TACATGCTCACTGTTGTGCAAGACATCCTGCATTTT...ATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAGCTACCACTCTATCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CAA 90 bp | GAGATGTCACAGTACATTTTAATTCCGTCTCTCGCCTTGTCGCTTATAAAACTACATCTCAGAGTTCTCTaGATGGAGGGGGAGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: EMSQYILIPSLALSLIKLHLRVL*MEGEFT Trigger: TGTGAACTCCCCCTCCATCAAGAGAACTCTGAGATG...TAGTTTTATAAGCGACAAGGCGAGAGACGGAATTAAAATGTACTGTGACATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CAA 90 bp | CATCCAGAGAAAAATCTAATGGATGCTCTGAGGCTCAATAATTTTTATCCCTGTCCCTGGATCTCCATATaGGCCTTTAGTCCAGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: HPEKNLMDALRLNNFYPCPWISI*AFSPDC Trigger: GCAATCTGGACTAAAGGCCAATATGGAGATCCAGGG...ACAGGGATAAAAATTATTGAGCCTCAGAGCATCCATTAGATTTTTCTCTGGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | CAATGCAAAACTAGACTCACTGTACTAGTTAGGACTTTTGCAAAGTACAAGAAGGGTGGGAATACCACGTaGCACATCTCAGAGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QCKTRLTVLVRTFAKYKKGGNTT*HISEFS Trigger: AGAGAACTCTGAGATGTGCAACGTGGTATTCCCACC...CTTCTTGTACTTTGCAAAAGTCCTAACTAGTACAGTGAGTCTAGTTTTGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | GAGATGTCACAGTACATTTTAATTCCGTCTCTCGCCTTGTCGCTTATAAAACTAGTGGAGTACGTGAGCTaGTATAGCCGCTCATTATTT | + |
|
Preference number: 5 (lower is better) Translates to: EMSQYILIPSLALSLIKLVEYVS*YSRSLF Trigger: AAATAATGAGCGGCTATACAAGCTCACGTACTCCAC...TAGTTTTATAAGCGACAAGGCGAGAGACGGAATTAAAATGTACTGTGACATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | CTACAAGGGTGTCCCCTACAAAGAACCATGTACCACATTACACTATCAAAAAGAGATGCCGACAGCATTTaGGACATCAAATCACTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LQGCPLQRTMYHITLSKRDADSI*DIKSLY Trigger: ATACAGTGATTTGATGTCCAAAATGCTGTCGGCATC...TCTTTTTGATAGTGTAATGTGGTACATGGTTCTTTGTAGGGGACACCCTTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | CATCCAGAGAAAAATCTAATGGATGCTCTGAGGCTCAATAATTTTTATCCCTGTTCCAGAGCCTTAATTTaGACCACTTTGTCTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPEKNLMDALRLNNFYPCSRALI*TTLSCW Trigger: CCAGCAAGACAAAGTGGTCAAAATTAAGGCTCTGGA...ACAGGGATAAAAATTATTGAGCCTCAGAGCATCCATTAGATTTTTCTCTGGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | CATCCAGAGAAAAATCTAATGGATGCTCTGAGGCTCAATAATTTTTATCCCTGTAGCTGTTATCGTGACTaGGATCACTTGATCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: HPEKNLMDALRLNNFYPCSCYRD*DHLIII Trigger: GATGATGATCAAGTGATCCAAGTCACGATAACAGCT...ACAGGGATAAAAATTATTGAGCCTCAGAGCATCCATTAGATTTTTCTCTGGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CAA 90 bp | GAGATGTCACAGTACATTTTAATTCCGTCTCTCGCCTTGTCGCTTATAAAACTATTTTCCTGCTATGGTTaGTTGGAAGTTCAAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EMSQYILIPSLALSLIKLFSCYG*LEVQGK Trigger: TTTGCCTTGAACTTCCAACAAACCATAGCAGGAAAA...TAGTTTTATAAGCGACAAGGCGAGAGACGGAATTAAAATGTACTGTGACATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | CAATGCAAAACTAGACTCACTGTACTAGTTAGGACTTTTGCAAAGTACAAGAAGACAATGGGAATGGCTTaGTATTTGGAATCAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QCKTRLTVLVRTFAKYKKTMGMA*YLESTA Trigger: AGCAGTTGATTCCAAATACAAAGCCATTCCCATTGT...CTTCTTGTACTTTGCAAAAGTCCTAACTAGTACAGTGAGTCTAGTTTTGCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS-3UTR CAA 90 bp | TTATTTGTCATCATCACAATTTATTTTCTACCTCAGCTAAACGTCCACTTCGTGGACGGATCATTTTGCTaGCAGGCATTTCAAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LFVIITIYFLPQLNVHFVDGSFC*QAFQNA Trigger: TGCATTTTGAAATGCCTGCAAGCAAAATGATCCGTC...CACGAAGTGGACGTTTAGCTGAGGTAGAAAATAAATTGTGATGATGACAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
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| CDS-3UTR CAA 90 bp | TTATTTGTCATCATCACAATTTATTTTCTACCTCAGCTAAACGTCCACTTCGTGATACTGCTGTCACTTTaGAAATCCAAAAAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFVIITIYFLPQLNVHFVILLSL*KSKKSR Trigger: CCTGGACTTTTTGGATTTCAAAAGTGACAGCAGTAT...CACGAAGTGGACGTTTAGCTGAGGTAGAAAATAAATTGTGATGATGACAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029805.13 |
||
| CDS TCA 72 bp | GGATCTCTTCTCTCCTCGAAGTCCGGAGGTGCTGAATaGAGGCCAGGAAGCTCTGGACGGCCTCGGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSLLSSKSGGAE*RPGSSGRPRPW Trigger: CCAAGGCCGAGGCCGTCCAGAGCTTCCTGGCCTTCATTCAGCACCTCCGGACTTCGAGGAGAGAAGAGATCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 72 bp | TGGAGGATCTCTTCTCTCCTCGAAGTCCGGAGGTGCTaGATGAAGGCCAGGAAGCTCTGGACGGCCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WRISSLLEVRRC*MKARKLWTASA Trigger: GGCCGAGGCCGTCCAGAGCTTCCTGGCCTTCATTCAGCACCTCCGGACTTCGAGGAGAGAAGAGATCCTCCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 72 bp | TGGACTTCCAGTGCTCCGCCAGAGAAGGGCATCCTTTaGAGACACGCTCGAGGACCTGTCCCACAATGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WTSSAPPEKGIL*RHARGPVPQWE Trigger: TTCCCATTGTGGGACAGGTCCTCGAGCGTGTCTGCAAAGGATGCCCTTCTCTGGCGGAGCACTGGAAGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 72 bp | ATGGACTTCCAGTGCTCCGCCAGAGAAGGGCATCCTTaGCAGACACGCTCGAGGACCTGTCCCACAATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: MDFQCSAREGHP*QTRSRTCPTMG Trigger: TCCCATTGTGGGACAGGTCCTCGAGCGTGTCTGCAAAGGATGCCCTTCTCTGGCGGAGCACTGGAAGTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 72 bp | CGGCCTTGGACAGGTTTTCAGGCTCCAGGTTCTTTCTaGTGGACTTCCAGTGCTCCGCCAGAGAAGGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RPWTGFQAPGSF*WTSSAPPEKGI Trigger: GATGCCCTTCTCTGGCGGAGCACTGGAAGTCCATCAGAAAGAACCTGGAGCCTGAAAACCTGTCCAAGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
||
| CDS GCA 72 bp | CTTCTCCAGCCTCAGCATACTTCAGAAGGAGCGGGATaGCTTCGGGAAGCAAGGCATTCTTCAGGGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLQPQHTSEGAG*LREARHSSGPA Trigger: TGCTGGCCCTGAAGAATGCCTTGCTTCCCGAAGGCATCCCGCTCCTTCTGAAGTATGCTGAGGCTGGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 72 bp | GGTGGGAATACCACGTTGCACATCTCAGAGTTCTCTTaGTGGAGGGGGAGTTCACATCCGGCCACTAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GGNTTLHISEFS*WRGSSHPATRL Trigger: GAGCCTAGTGGCCGGATGTGAACTCCCCCTCCATCAAGAGAACTCTGAGATGTGCAACGTGGTATTCCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CCA 72 bp | TTCACCTCATCTGTGATGAAGGAGACATCGTATCTCTaGAGAACAGTGGTGGCCAGGTGGCTGACGGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: FTSSVMKETSYL*RTVVARWLTGP Trigger: AGGGCCCGTCAGCCACCTGGCCACCACTGTTCTCCAGAGATACGATGTCTCCTTCATCACAGATGAGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 90 bp | TTCTTTCTGATGGACTTCCAGTGCTCCGCCAGAGAAGGGCATCCTTaGCAGACACGCTCGAGGACCTGTCCCACAATGGGAATGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FFLMDFQCSAREGHP*QTRSRTCPTMGMAL Trigger: CAAAGCCATTCCCATTGTGGGACAGGTCCTCGAGCGTGTCTGCAAAGGATGCCCTTCTCTGGCGGAGCACTGGAAGTCCATCAGAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 72 bp | TGCCCACTGGCTCGTTTTCATAGGAGTAGAACTCCTTaGCCTTCCCCCGGACCAGATGAAGAAGCATGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CPLARFHRSRTP*PSPGPDEEAWV Trigger: GACCCATGCTTCTTCATCTGGTCCGGGGGAAGGTCAAGGAGTTCTACTCCTATGAAAACGAGCCAGTGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 72 bp | TTTTCAGGCTCCAGGTTCTTTCTGATGGACTTCCAGTaGTCCGCCAGAGAAGGGCATCCTTTGCAGACACGC | + |
|
Preference number: 6 (lower is better) Translates to: FSGSRFFLMDFQ*SAREGHPLQTR Trigger: GCGTGTCTGCAAAGGATGCCCTTCTCTGGCGGAGCACTGGAAGTCCATCAGAAAGAACCTGGAGCCTGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 72 bp | TCGAATTGCCTGAGTGGGGCTTCAGCCTTGTCCATCTaGATGCAGACCAAGAACGGGTACTGTGAGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SNCLSGASALSI*MQTKNGYCENC Trigger: GCAGTTCTCACAGTACCCGTTCTTGGTCTGCATGCAGATGGACAAGGCTGAAGCCCCACTCAGGCAATTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CCA 72 bp | AATTACACCTGCCACTTGCTTCCCGGGGATCATCCTTaGGCCGGCTTCAGTTGTCTTCAGCTCCAATTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: NYTCHLLPGDHP*AGFSCLQLQFL Trigger: CAGAAATTGGAGCTGAAGACAACTGAAGCCGGCCCAAGGATGATCCCCGGGAAGCAAGTGGCAGGTGTAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 90 bp | CACCTGCCACTTGCTTCCCGGGGATCATCCTTGGGCCGGCTTCAGTaGTCTTCAGCTCCAATTTCTGCTTCGACACTATTTTTCCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: HLPLASRGSSLGRLQ*SSAPISASTLFFLL Trigger: TAGCAGGAAAAATAGTGTCGAAGCAGAAATTGGAGCTGAAGACAACTGAAGCCGGCCCAAGGATGATCCCCGGGAAGCAAGTGGCAGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 90 bp | CAGACACGCTCGAGGACCTGTCCCACAATGGGAATGGCTTTGTATTaGGAATCAACTGCTTTAATTACACCTGCCACTTGCTTCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QTRSRTCPTMGMALY*ESTALITPATCFPG Trigger: CCCCGGGAAGCAAGTGGCAGGTGTAATTAAAGCAGTTGATTCCAAATACAAAGCCATTCCCATTGTGGGACAGGTCCTCGAGCGTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 90 bp | AGCCTTTCATACTTTGTCTCGAATTGCCTGAGTGGGGCTTCAGCCTaGTCCATCTGCATGCAGACCAAGAACGGGTACTGTGAGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSYFVSNCLSGASA*SICMQTKNGYCENC Trigger: GCAGTTCTCACAGTACCCGTTCTTGGTCTGCATGCAGATGGACAAGGCTGAAGCCCCACTCAGGCAATTCGAGACAAAGTATGAAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 72 bp | CTTGCTTCCCGGGGATCATCCTTGGGCCGGCTTCAGTaGTCTTCAGCTCCAATTTCTGCTTCGACACTATTT | + |
|
Preference number: 6 (lower is better) Translates to: LASRGSSLGRLQ*SSAPISASTLF Trigger: AAATAGTGTCGAAGCAGAAATTGGAGCTGAAGACAACTGAAGCCGGCCCAAGGATGATCCCCGGGAAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 72 bp | TACTTTGTCTCGAATTGCCTGAGTGGGGCTTCAGCCTaGTCCATCTGCATGCAGACCAAGAACGGGTACTGT | + |
|
Preference number: 6 (lower is better) Translates to: YFVSNCLSGASA*SICMQTKNGYC Trigger: ACAGTACCCGTTCTTGGTCTGCATGCAGATGGACAAGGCTGAAGCCCCACTCAGGCAATTCGAGACAAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 72 bp | TGTGACAGGCCTAAGCTGAACATCAAACAGGATGGCTaGCATGCCAGCATAAGAGTCAAGGTTCTCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CDRPKLNIKQDG*HASIRVKVLLS Trigger: GGAGAGGAGAACCTTGACTCTTATGCTGGCATGTCAGCCATCCTGTTTGATGTTCAGCTTAGGCCTGTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 72 bp | TTTCCACACCAGCTTTCACAAAAGAGGCATCCACTGTaGCGTCGCTGGTTATCACCACAGCCACCCGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: FPHQLSQKRHPL*RRWLSPQPPDF Trigger: AAAATCGGGTGGCTGTGGTGATAACCAGCGACGTCACAGTGGATGCCTCTTTTGTGAAAGCTGGTGTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 72 bp | CTGCCTGTAGATAGCCTTTCATACTTTGTCTCGAATTaGCTGAGTGGGGCTTCAGCCTTGTCCATCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LPVDSLSYFVSN*LSGASALSICM Trigger: CATGCAGATGGACAAGGCTGAAGCCCCACTCAGGCAATTCGAGACAAAGTATGAAAGGCTATCTACAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CCA 72 bp | CATAAGAGTCAAGGTTCTCCTCTCCTTCATCAGGAGTaGCTGCAATTAAGCCTTCCAGCCCTTGGGCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: HKSQGSPLLHQE*LQLSLPALGLQ Trigger: TTGAAGCCCAAGGGCTGGAAGGCTTAATTGCAGCCACTCCTGATGAAGGAGAGGAGAACCTTGACTCTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CCA 72 bp | AAACCATCCACCGGAGTTATCGCTTTCTGGCTGAGGTaGGAATACCACGTTGCACATCTCAGAGTTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KPSTGVIAFWLR*EYHVAHLRVLL Trigger: CAAGAGAACTCTGAGATGTGCAACGTGGTATTCCCACCTCAGCCAGAAAGCGATAACTCCGGTGGATGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 72 bp | GTATTTGGAATCAACTGCTTTAATTACACCTGCCACTaGCTTCCCGGGGATCATCCTTGGGCCGGCTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VFGINCFNYTCH*LPGDHPWAGFS Trigger: ACTGAAGCCGGCCCAAGGATGATCCCCGGGAAGCAAGTGGCAGGTGTAATTAAAGCAGTTGATTCCAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 90 bp | CTGACCAGGGCTCCAATGATGATCATAACCGACTCTCTGATGTCGTaGCTTGCAAAGGAACCTTTGAACTTACTAAGGAGGGCTCGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTRAPMMIITDSLMS*LAKEPLNLLRRARR Trigger: CCTACGAGCCCTCCTTAGTAAGTTCAAAGGTTCCTTTGCAAGCAACGACATCAGAGAGTCGGTTATGATCATCATTGGAGCCCTGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 72 bp | CTTTTGCCCTGGAAGATGCTCTTCTCGCCTCTCTGTTaGCCCGCATTTTCAACGTTAACAGCTGTTATCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLPWKMLFSPLC*PAFSTLTAVIV Trigger: CACGATAACAGCTGTTAACGTTGAAAATGCGGGTCAACAGAGAGGCGAGAAGAGCATCTTCCAGGGCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 72 bp | TGTTCTTCACATCCATGTAGGATGGGTTCTTTAAGATaGCAGCAGCGGCAGTTGTGCGCACCGTCTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CSSHPCRMGSLR*QQRQLCAPSSH Trigger: ATGAGAAGACGGTGCGCACAACTGCCGCTGCTGTCATCTTAAAGAACCCATCCTACATGGATGTGAAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 72 bp | TATTTGGAATCAACTGCTTTAATTACACCTGCCACTTaGTTCCCGGGGATCATCCTTGGGCCGGCTTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: YLESTALITPAT*FPGIILGPASV Trigger: AACTGAAGCCGGCCCAAGGATGATCCCCGGGAAGCAAGTGGCAGGTGTAATTAAAGCAGTTGATTCCAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
||
| CDS GCA 72 bp | TTGGGCTTCAATCACCACCTGACTACCATGAAGCTCTaGCTTCCCGATGTACTGGAAGATGTTCAGGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: LGFNHHLTTMKL*LPDVLEDVQVT Trigger: AGTAACCTGAACATCTTCCAGTACATCGGGAAGGCAGAGCTTCATGGTAGTCAGGTGGTGATTGAAGCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
||
| CDS CCA 72 bp | GTGACAGATGTGGCTTTTGAACTGACACCCAGCACCTaGTTTGCCGTTGTAAATCCAGACCGCTCAATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VTDVAFELTPST*FAVVNPDRSIL Trigger: CAAAATTGAGCGGTCTGGATTTACAACGGCAAACCAGGTGCTGGGTGTCAGTTCAAAAGCCACATCTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
||
| CDS CAA 90 bp | CCTTTGCAGACACGCTCGAGGACCTGTCCCACAATGGGAATGGCTTaGTATTTGGAATCAACTGCTTTAATTACACCTGCCACTTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PLQTRSRTCPTMGMA*YLESTALITPATCF Trigger: GAAGCAAGTGGCAGGTGTAATTAAAGCAGTTGATTCCAAATACAAAGCCATTCCCATTGTGGGACAGGTCCTCGAGCGTGTCTGCAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
||
| CDS CAA 90 bp | CTTAGGTGTACTTTTGCCCTGGAAGATGCTCTTCTCGCCTCTCTGTaGACCCGCATTTTCAACGTTAACAGCTGTTATCGTGACTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LRCTFALEDALLASL*TRIFNVNSCYRDLD Trigger: ATCCAAGTCACGATAACAGCTGTTAACGTTGAAAATGCGGGTCAACAGAGAGGCGAGAAGAGCATCTTCCAGGGCAAAAGTACACCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
||
| CDS TCA 72 bp | GTCCTCTATCTTGTAGGTAGTGACAGATGTGGCTTTTaGACTGACACCCAGCACCTGGTTTGCCGTTGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: VLYLVGSDRCGF*TDTQHLVCRCK Trigger: TTTACAACGGCAAACCAGGTGCTGGGTGTCAGTTCAAAAGCCACATCTGTCACTACCTACAAGATAGAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
||
| CDS GCA 72 bp | CTTGGGCCGGCTTCAGTTGTCTTCAGCTCCAATTTCTaGTTCGACACTATTTTTCCTGCTATGGTTTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: LGPASVVFSSNF*FDTIFPAMVCW Trigger: CCAACAAACCATAGCAGGAAAAATAGTGTCGAAGCAGAAATTGGAGCTGAAGACAACTGAAGCCGGCCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CCA 72 bp | CTACGTAGCCAGTATAGGCAGAAGAGGATCCACTCTTaGAGAAACGGTCATAATTGTGAACAGCCATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LRSQYRQKRIHS*RNGHNCEQPSP Trigger: AGGAGATGGCTGTTCACAATTATGACCGTTTCTCCAAGAGTGGATCCTCTTCTGCCTATACTGGCTACGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 72 bp | ACTTTTGCCCTGGAAGATGCTCTTCTCGCCTCTCTGTaGACCCGCATTTTCAACGTTAACAGCTGTTATCGT | + |
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Preference number: 6 (lower is better) Translates to: TFALEDALLASL*TRIFNVNSCYR Trigger: ACGATAACAGCTGTTAACGTTGAAAATGCGGGTCAACAGAGAGGCGAGAAGAGCATCTTCCAGGGCAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 90 bp | GGCATTTCAAAATGCAGGATGTCTTGCACAACAGTGAGCATGTATTaGTTCATCTCTTTCGGGAGTTCCCCAATGGACAGCAGGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: GISKCRMSCTTVSMY*FISFGSSPMDSRMF Trigger: GAACATCCTGCTGTCCATTGGGGAACTCCCGAAAGAGATGAACAAATACATGCTCACTGTTGTGCAAGACATCCTGCATTTTGAAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 72 bp | TCCCACAATGGGAATGGCTTTGTATTTGGAATCAACTaGTTTAATTACACCTGCCACTTGCTTCCCGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SHNGNGFVFGIN*FNYTCHLLPGD Trigger: ATCCCCGGGAAGCAAGTGGCAGGTGTAATTAAAGCAGTTGATTCCAAATACAAAGCCATTCCCATTGTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 72 bp | TGTACTGGAAGATGTTCAGGTTACTTCTCCTCAGAATaGCAGAGCCAGAGTAAAGGATGTCAAGGCTGTATG | + |
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Preference number: 6 (lower is better) Translates to: CTGRCSGYFSSE*QSQSKGCQGCM Trigger: CATACAGCCTTGACATCCTTTACTCTGGCTCTGGCATTCTGAGGAGAAGTAACCTGAACATCTTCCAGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CCA 72 bp | TCTACCTCGTTGGTAGTTCCAGAGCTTAGCTGCATCTaGAATAAGCTAGCCAAGCCTCTCTTGAGATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: STSLVVPELSCI*NKLAKPLLRFS Trigger: AGAAAATCTCAAGAGAGGCTTGGCTAGCTTATTCCAGATGCAGCTAAGCTCTGGAACTACCAACGAGGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 72 bp | CCCCCATCAAGAAACACTTCAGTGGAGTACGTGAGCTaGTATAGCCGCTCATTATTTAATGAGAGGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PPSRNTSVEYVS*YSRSLFNERPV Trigger: AACTGGCCTCTCATTAAATAATGAGCGGCTATACAAGCTCACGTACTCCACTGAAGTGTTTCTTGATGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 72 bp | TCGAGGACCTGTCCCACAATGGGAATGGCTTTGTATTaGGAATCAACTGCTTTAATTACACCTGCCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: SRTCPTMGMALY*ESTALITPATC Trigger: GCAAGTGGCAGGTGTAATTAAAGCAGTTGATTCCAAATACAAAGCCATTCCCATTGTGGGACAGGTCCTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 72 bp | AAATGCAGGATGTCTTGCACAACAGTGAGCATGTATTaGTTCATCTCTTTCGGGAGTTCCCCAATGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: KCRMSCTTVSMY*FISFGSSPMDS Trigger: GCTGTCCATTGGGGAACTCCCGAAAGAGATGAACAAATACATGCTCACTGTTGTGCAAGACATCCTGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 72 bp | TGGAGAAACGGTCATAATTGTGAACAGCCATCTCCTTaGGAACTCGACGGATCATTTTGCTTGCAGGCATTT | + |
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Preference number: 6 (lower is better) Translates to: WRNGHNCEQPSP*ELDGSFCLQAF Trigger: AAATGCCTGCAAGCAAAATGATCCGTCGAGTTCTCAAGGAGATGGCTGTTCACAATTATGACCGTTTCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS GCA 72 bp | AATGATGATCATAACCGACTCTCTGATGTCGTTGCTTaGAAAGGAACCTTTGAACTTACTAAGGAGGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: NDDHNRLSDVVA*KGTFELTKEGS Trigger: CGAGCCCTCCTTAGTAAGTTCAAAGGTTCCTTTGCAAGCAACGACATCAGAGAGTCGGTTATGATCATCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CCA 72 bp | TTCTGCTTCGACACTATTTTTCCTGCTATGGTTTGTTaGAAGTTCAAGGCAAAAGCCCTGGTCTCTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: FCFDTIFPAMVC*KFKAKALVSSA Trigger: TGCAGAAGAGACCAGGGCTTTTGCCTTGAACTTCCAACAAACCATAGCAGGAAAAATAGTGTCGAAGCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CCA 72 bp | TCCATTGAACCAGAAATATCAATAGCTAGACCACCCTaGATCTCCATATTGGCCTTTAGTCCAGATTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SIEPEISIARPP*ISILAFSPDCS Trigger: GCTGCAATCTGGACTAAAGGCCAATATGGAGATCCAGGGTGGTCTAGCTATTGATATTTCTGGTTCAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 72 bp | AGGAACCTTTCCTGGAGTATGATACTGCTGTCACTTTaGAAATCCAAAAAGTCCAGGATGGCTTCTAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: RNLSWSMILLSL*KSKKSRMASSE Trigger: CTCGCTAGAAGCCATCCTGGACTTTTTGGATTTCAAAAGTGACAGCAGTATCATACTCCAGGAAAGGTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS CAA 72 bp | GCTCCAATGATGATCATAACCGACTCTCTGATGTCGTaGCTTGCAAAGGAACCTTTGAACTTACTAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: APMMIITDSLMS*LAKEPLNLLRR Trigger: CCTCCTTAGTAAGTTCAAAGGTTCCTTTGCAAGCAACGACATCAGAGAGTCGGTTATGATCATCATTGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 72 bp | TCAACGTTAACAGCTGTTATCGTGACTTGGATCACTTaGTCATCATCACCATCAGGATTCCTCCACAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: STLTAVIVTWIT*SSSPSGFLHSN Trigger: GTTACTGTGGAGGAATCCTGATGGTGATGATGATCAAGTGATCCAAGTCACGATAACAGCTGTTAACGTTGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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| CDS TCA 72 bp | TATAGCCGCTCATTATTTAATGAGAGGCCAGTTGTGTaGCCGCTATTTTGCATGGCACACAAAGTAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: YSRSLFNERPVV*PLFCMAHKVGK Trigger: CTTTCCTACTTTGTGTGCCATGCAAAATAGCGGTCACACAACTGGCCTCTCATTAAATAATGAGCGGCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098580.6 |
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| CDS CAA 72 bp | ACCCGCATTTTCAACGTTAACAGCTGTTATCGTGACTaGGATCACTTGATCATCATCACCATCAGGATTCCT | + |
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Preference number: 6 (lower is better) Translates to: TRIFNVNSCYRD*DHLIIITIRIP Trigger: AGGAATCCTGATGGTGATGATGATCAAGTGATCCAAGTCACGATAACAGCTGTTAACGTTGAAAATGCGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029805.13 ENSMUST00000098580.6 |
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